Mol Cell Biol. 1992 November; 12(11): 5189-5196
TFIIA induces conformational changes in TFIID via interactions with the basic repeat.
D K Lee,
J DeJong,
S Hashimoto,
M Horikoshi and
R G Roeder
Laboratory of Biochemistry and Molecular Biology, Rockefeller University, New York, New York 10021.
ABSTRACT
DNA-binding studies with Saccharomyces cerevisiae TFIID point mutants indicated that TFIIA interacts with the basic repeat region of TFIID and induces structural changes. The latter was shown by the ability of TFIIA to compensate for TFIID point mutants defective for DNA binding. Interaction with TFIIA also rendered TFIID binding temperature independent, thus mimicking the effect of removing the nonconserved N terminus of TFIID. In addition, N-terminal truncation of the TFIID point mutants defective for DNA binding mimicked the ability of TFIIA to restore DNA binding of those mutants. Taken together, these results suggest that TFIIA enhances TFIID binding to DNA by eliminating an otherwise inhibitory effect of the nonconserved N terminus of TFIID. Furthermore, analyses of TFIID contact points on DNA and binding studies with TATA-containing oligonucleotide probes showed that TFIIA decreases the effect of sequences flanking the adenovirus major late TATA element on TFIID binding to DNA, suggesting a possible role of TFIIA in allowing TFIID to recognize a wider variety of promoters.
Mol Cell Biol. 1992 November; 12(11): 5189-5196
This article has been cited by other articles:
-
Zabierowski, S. E., DeLuca, N. A.
(2008). Stabilized Binding of TBP to the TATA Box of Herpes Simplex Virus Type 1 Early (tk) and Late (gC) Promoters by TFIIA and ICP4. J. Virol.
82: 3546-3554
[Abstract]
[Full Text]
-
Matsubara, K., Sano, N., Umehara, T., Horikoshi, M.
(2007). Global analysis of functional surfaces of core histones with comprehensive point mutants.. GENES CELLS
12: 13-33
[Abstract]
[Full Text]
-
Alper, H., Moxley, J., Nevoigt, E., Fink, G. R., Stephanopoulos, G.
(2006). Engineering Yeast Transcription Machinery for Improved Ethanol Tolerance and Production. Science
314: 1565-1568
[Abstract]
[Full Text]
-
Kraemer, S. M., Goldstrohm, D. A., Berger, A., Hankey, S., Rovinsky, S. A., Scott Moye-Rowley, W., Stargell, L. A.
(2006). TFIIA Plays a Role in the Response to Oxidative Stress.. Eukaryot Cell
5: 1081-1090
[Abstract]
[Full Text]
-
Klejman, M. P., Zhao, X., van Schaik, F. M. A., Herr, W., Timmers, H. Th. M.
(2005). Mutational analysis of BTAF1-TBP interaction: BTAF1 can rescue DNA-binding defective TBP mutants. Nucleic Acids Res
33: 5426-5436
[Abstract]
[Full Text]
-
Robinson, M. M., Yatherajam, G., Ranallo, R. T., Bric, A., Paule, M. R., Stargell, L. A.
(2005). Mapping and Functional Characterization of the TAF11 Interaction with TFIIA. Mol. Cell. Biol.
25: 945-957
[Abstract]
[Full Text]
-
Zabierowski, S., DeLuca, N. A.
(2004). Differential Cellular Requirements for Activation of Herpes Simplex Virus Type 1 Early (tk) and Late (gC) Promoters by ICP4. J. Virol.
78: 6162-6170
[Abstract]
[Full Text]
-
Adams, C. A., Kar, S. R., Hopper, J. E., Fried, M. G.
(2004). Self-association of the Amino-terminal Domain of the Yeast TATA-binding Protein. J. Biol. Chem.
279: 1376-1382
[Abstract]
[Full Text]
-
Kou, H., Irvin, J. D., Huisinga, K. L., Mitra, M., Pugh, B. F.
(2003). Structural and Functional Analysis of Mutations along the Crystallographic Dimer Interface of the Yeast TATA Binding Protein. Mol. Cell. Biol.
23: 3186-3201
[Abstract]
[Full Text]
-
Spencer, J. V., Arndt, K. M.
(2002). A TATA Binding Protein Mutant with Increased Affinity for DNA Directs Transcription from a Reversed TATA Sequence In Vivo. Mol. Cell. Biol.
22: 8744-8755
[Abstract]
[Full Text]
-
Upadhyaya, A. B., Khan, M., Mou, T.-C., Junker, M., Gray, D. M., DeJong, J.
(2002). The Germ Cell-specific Transcription Factor ALF. STRUCTURAL PROPERTIES AND STABILIZATION OF THE TATA-BINDING PROTEIN (TBP)-DNA COMPLEX. J. Biol. Chem.
277: 34208-34216
[Abstract]
[Full Text]
-
Lee, M., Struhl, K.
(2001). Multiple Functions of the Nonconserved N-Terminal Domain of Yeast TATA-Binding Protein. Genetics
158: 87-93
[Abstract]
[Full Text]
-
Stargell, L. A., Moqtaderi, Z., Dorris, D. R., Ogg, R. C., Struhl, K.
(2000). TFIIA Has Activator-dependent and Core Promoter Functions in Vivo. J. Biol. Chem.
275: 12374-12380
[Abstract]
[Full Text]
-
Perera, L. P.
(2000). The TATA Motif Specifies the Differential Activation of Minimal Promoters by Varicella Zoster Virus Immediate-early Regulatory Protein IE62. J. Biol. Chem.
275: 487-496
[Abstract]
[Full Text]
-
Liu, Q., Gabriel, S. E., Roinick, K. L., Ward, R. D., Arndt, K. M.
(1999). Analysis of TFIIA Function In Vivo: Evidence for a Role in TATA-Binding Protein Recruitment and Gene-Specific Activation. Mol. Cell. Biol.
19: 8673-8685
[Abstract]
[Full Text]
-
Upadhyaya, A. B., Lee, S. H., DeJong, J.
(1999). Identification of a General Transcription Factor TFIIAalpha /beta Homolog Selectively Expressed in Testis. J. Biol. Chem.
274: 18040-18048
[Abstract]
[Full Text]
-
Sutrias-Grau, M., Bianchi, M. E., Bernues, J.
(1999). High Mobility Group Protein 1 Interacts Specifically with the Core Domain of Human TATA Box-binding Protein and Interferes with Transcription Factor IIB within the Pre-initiation Complex. J. Biol. Chem.
274: 1628-1634
[Abstract]
[Full Text]
-
Yokomori, K., Verrijzer, C. P., Tjian, R.
(1998). An interplay between TATA box-binding protein and transcription factors IIE and IIA modulates DNA binding and transcription. Proc. Natl. Acad. Sci. USA
95: 6722-6727
[Abstract]
[Full Text]
-
Ozer, J., Mitsouras, K., Zerby, D., Carey, M., Lieberman, P. M.
(1998). Transcription Factor IIA Derepresses TATA-binding Protein (TBP)-associated Factor Inhibition of TBP-DNA Binding. J. Biol. Chem.
273: 14293-14300
[Abstract]
[Full Text]
-
Olave, I., Reinberg, D., Vales, L. D.
(1998). The mammalian transcriptional repressor RBP (CBF1) targets TFIID and TFIIA to prevent activated transcription. Genes Dev.
12: 1621-1637
[Abstract]
[Full Text]
-
Hori, R., Carey, M.
(1997). Protease Footprinting Analysis of Ternary Complex Formation by Human TFIIA. J. Biol. Chem.
272: 1180-1187
[Abstract]
[Full Text]
-
Nishikawa, J.-i., Kokubo, T., Horikoshi, M., Roeder, R. G., Nakatani, Y.
(1997). Drosophila TAFII230 and the transcriptional activator VP16 bind competitively to the TATA box-binding domain of the TATA box-binding protein. Proc. Natl. Acad. Sci. USA
94: 85-90
[Abstract]
[Full Text]
-
Orphanides, G, Lagrange, T, Reinberg, D
(1996). The general transcription factors of RNA polymerase II.. Genes Dev.
10: 2657-2683
-
Bryant, G O, Martel, L S, Burley, S K, Berk, A J
(1996). Radical mutations reveal TATA-box binding protein surfaces required for activated transcription in vivo.. Genes Dev.
10: 2491-2504
[Abstract]
-
Roberts, S., Miller, S. J., Lane, W. S., Lee, S., Hahn, S.
(1996). Cloning and Functional Characterization of the Gene Encoding the TFIIIB90 Subunit of RNA Polymerase III Transcription Factor TFIIIB. J. Biol. Chem.
271: 14903-14909
[Abstract]
[Full Text]
-
Ozer, J., Bolden, A. H., Lieberman, P. M.
(1996). Transcription Factor IIA Mutations Show Activator-specific Defects and Reveal a IIA Function Distinct from Stimulation of TBP-DNA Binding. J. Biol. Chem.
271: 11182-11190
[Abstract]
[Full Text]
-
Whitehall, S K, Kassavetis, G A, Geiduschek, E P
(1995). The symmetry of the yeast U6 RNA gene's TATA box and the orientation of the TATA-binding protein in yeast TFIIIB.. Genes Dev.
9: 2974-2985
[Abstract]
-
Stargell, L., Struhl, K
(1995). The TBP-TFIIA interaction in the response to acidic activators in vivo. Science
269: 75-78
[Abstract]
-
Kim, T. K., Zhao, Y., Ge, H., Bernstein, R., Roeder, R. G.
(1995). TATA-binding Protein Residues Implicated in a Functional Interplay between Negative Cofactor NC2 (Dr1) and General Factors TFIIA and TFIIB. J. Biol. Chem.
270: 10976-10981
[Abstract]
[Full Text]
-
Tansey, W P, Ruppert, S, Tjian, R, Herr, W
(1994). Multiple regions of TBP participate in the response to transcriptional activators in vivo.. Genes Dev.
8: 2756-2769
[Abstract]
-
Yokomori, K, Zeidler, M P, Chen, J L, Verrijzer, C P, Mlodzik, M, Tjian, R
(1994). Drosophila TFIIA directs cooperative DNA binding with TBP and mediates transcriptional activation.. Genes Dev.
8: 2313-2323
[Abstract]
-
Ozer, J, Moore, P A, Bolden, A H, Lee, A, Rosen, C A, Lieberman, P M
(1994). Molecular cloning of the small (gamma) subunit of human TFIIA reveals functions critical for activated transcription.. Genes Dev.
8: 2324-2335
[Abstract]
-
Sun, X, Ma, D, Sheldon, M, Yeung, K, Reinberg, D
(1994). Reconstitution of human TFIIA activity from recombinant polypeptides: a role in TFIID-mediated transcription.. Genes Dev.
8: 2336-2348
[Abstract]
-
Collart, M A, Struhl, K
(1994). NOT1(CDC39), NOT2(CDC36), NOT3, and NOT4 encode a global-negative regulator of transcription that differentially affects TATA-element utilization.. Genes Dev.
8: 525-537
[Abstract]
-
DeJong, J, Roeder, R G
(1993). A single cDNA, hTFIIA/alpha, encodes both the p35 and p19 subunits of human TFIIA.. Genes Dev.
7: 2220-2234
[Abstract]
-
Ma, D, Watanabe, H, Mermelstein, F, Admon, A, Oguri, K, Sun, X, Wada, T, Imai, T, Shiroya, T, Reinberg, D
(1993). Isolation of a cDNA encoding the largest subunit of TFIIA reveals functions important for activated transcription.. Genes Dev.
7: 2246-2257
[Abstract]
-
Cormack, B., Struhl, K
(1993). Regional codon randomization: defining a TATA-binding protein surface required for RNA polymerase III transcription. Science
262: 244-248
[Abstract]
-
Hernandez, N
(1993). TBP, a universal eukaryotic transcription factor?. Genes Dev.
7: 1291-1308
-
Lu, W., Peterson, R., Dasgupta, A., Scovell, W. M.
(2000). Influence of HMG-1 and Adenovirus Oncoprotein E1A on Early Stages of Transcriptional Preinitiation Complex Assembly. J. Biol. Chem.
275: 35006-35012
[Abstract]
[Full Text]
-
Solow, S., Salunek, M., Ryan, R., Lieberman, P. M.
(2001). TAFII 250 Phosphorylates Human Transcription Factor IIA on Serine Residues Important for TBP Binding and Transcription Activity. J. Biol. Chem.
276: 15886-15892
[Abstract]
[Full Text]
-
Das, D., Scovell, W. M.
(2001). The Binding Interaction of HMG-1 with the TATA-binding Protein/TATA Complex. J. Biol. Chem.
276: 32597-32605
[Abstract]
[Full Text]
-
Stewart, J. J., Stargell, L. A.
(2001). The Stability of the TFIIA-TBP-DNA Complex Is Dependent on the Sequence of the TATAAA Element. J. Biol. Chem.
276: 30078-30084
[Abstract]
[Full Text]
Copyright © 1992 by the American Society for Microbiology. All rights reserved.