Mol Cell Biol. 1994 March; 14(3): 1786-1795
Characterization of the DNA-binding properties of the myeloid zinc finger protein MZF1: two independent DNA-binding domains recognize two DNA consensus sequences with a common G-rich core.
J F Morris,
R Hromas and
F J Rauscher 3rd
Wistar Institute of Anatomy and Biology, Philadelphia, Pennsylvania 19104.
ABSTRACT
The myeloid zinc finger gene 1, MZF1, encodes a transcription factor which is expressed in hematopoietic progenitor cells that are committed to myeloid lineage differentiation. MZF1 contains 13 C2H2 zinc fingers arranged in two domains which are separated by a short glycine- and proline-rich sequence. The first domain consists of zinc fingers 1 to 4, and the second domain is formed by zinc fingers 5 to 13. We have determined that both sets of zinc finger domains bind DNA. Purified, recombinant MZF1 proteins containing either the first set of zinc fingers or the second set were prepared and used to affinity select DNA sequences from a library of degenerate oligonucleotides by using successive rounds of gel shift followed by PCR amplification. Surprisingly, both DNA-binding domains of MZF1 selected similar DNA-binding consensus sequences containing a core of four or five guanine residues, reminiscent of an NF-kappa B half-site: 1-4, 5'-AGTGGGGA-3'; 5-13, 5'-CGGGnGAGGGGGAA-3'. The full-length MZF1 protein containing both sets of zinc finger DNA-binding domains recognizes synthetic oligonucleotides containing either the 1-4 or 5-13 consensus binding sites in gel shift assays. Thus, we have identified the core DNA consensus binding sites for each of the two DNA-binding domains of a myeloid-specific zinc finger transcription factor. Identification of these DNA-binding sites will allow us to identify target genes regulated by MZF1 and to assess the role of MZF1 as a transcriptional regulator of hematopoiesis.
Mol Cell Biol. 1994 March; 14(3): 1786-1795
This article has been cited by other articles:
-
McAlister, V. J., Owens, R. A.
(2007). Preferential Integration of Adeno-Associated Virus Type 2 into a Polypyrimidine/Polypurine-Rich Region within AAVS1. J. Virol.
81: 9718-9726
[Abstract]
[Full Text]
-
Guyot, B., Murai, K., Fujiwara, Y., Valverde-Garduno, V., Hammett, M., Wells, S., Dear, N., Orkin, S. H., Porcher, C., Vyas, P.
(2006). Characterization of a Megakaryocyte-specific Enhancer of the Key Hemopoietic Transcription Factor GATA1. J. Biol. Chem.
281: 13733-13742
[Abstract]
[Full Text]
-
Novak, A. J., Grote, D. M., Ziesmer, S. C., Kline, M. P., Manske, M. K., Slager, S., Witzig, T. E., Shanafelt, T., Call, T. G., Kay, N. E., Jelinek, D. F., Cerhan, J. R., Gross, J. A., Harder, B., Dillon, S. R., Ansell, S. M.
(2006). Elevated Serum B-Lymphocyte Stimulator Levels in Patients With Familial Lymphoproliferative Disorders. JCO
24: 983-987
[Abstract]
[Full Text]
-
Yu, X., Zhu, X., Pi, W., Ling, J., Ko, L., Takeda, Y., Tuan, D.
(2005). The Long Terminal Repeat (LTR) of ERV-9 Human Endogenous Retrovirus Binds to NF-Y in the Assembly of an Active LTR Enhancer Complex NF-Y/MZF1/GATA-2. J. Biol. Chem.
280: 35184-35194
[Abstract]
[Full Text]
-
Ulatowski, L. M., Whitmore, K. L., Romigh, T., VanderWyden, A. S., Satinover, S. M., Drumm, M. L.
(2004). Strain-specific variants of the mouse Cftr promoter region reveal transcriptional regulatory elements. Hum Mol Genet
13: 1933-1941
[Abstract]
[Full Text]
-
Shen, C.-H., Steiner, L. A.
(2004). Genome Structure and Thymic Expression of an Endogenous Retrovirus in Zebrafish. J. Virol.
78: 899-911
[Abstract]
[Full Text]
-
Zhong, X.-P., Maltzman, J. S., Hainey, E. A., Koretzky, G. A.
(2003). Transcriptional Regulation of Src Homology 2 Domain-Containing Leukocyte Phosphoprotein of 76 kDa: Dissection of Key Promoter Elements. J. Immunol.
171: 6621-6629
[Abstract]
[Full Text]
-
Follows, G. A., Tagoh, H., Lefevre, P., Morgan, G. J., Bonifer, C.
(2003). Differential transcription factor occupancy but evolutionarily conserved chromatin features at the human and mouse M-CSF (CSF-1) receptor loci. Nucleic Acids Res
31: 5805-5816
[Abstract]
[Full Text]
-
Takahashi, K., Nishiyama, C., Hasegawa, M., Akizawa, Y., Ra, C.
(2003). Regulation of the Human High Affinity IgE Receptor {beta}-Chain Gene Expression Via an Intronic Element. J. Immunol.
171: 2478-2484
[Abstract]
[Full Text]
-
Ogawa, H., Murayama, A., Nagata, S., Fukunaga, R.
(2003). Regulation of Myeloid Zinc Finger Protein 2A Transactivation Activity through Phosphorylation by Mitogen-activated Protein Kinases. J. Biol. Chem.
278: 2921-2927
[Abstract]
[Full Text]
-
Hansen, S., Holm, D., Moeller, V., Vitved, L., Bendixen, C., Reid, K. B. M., Skjoedt, K., Holmskov, U.
(2002). CL-46, a Novel Collectin Highly Expressed in Bovine Thymus and Liver. J. Immunol.
169: 5726-5734
[Abstract]
[Full Text]
-
Whetstine, J. R., Witt, T. L., Matherly, L. H.
(2002). The Human Reduced Folate Carrier Gene Is Regulated by the AP2 and Sp1 Transcription Factor Families and a Functional 61-Base Pair Polymorphism. J. Biol. Chem.
277: 43873-43880
[Abstract]
[Full Text]
-
Peng, H., Zheng, L., Lee, W.-H., Rux, J. J., Rauscher, F. J. III
(2002). A Common DNA-binding Site for SZF1 and the BRCA1-associated Zinc Finger Protein, ZBRK1. Cancer Res.
62: 3773-3781
[Abstract]
[Full Text]
-
Higaki, Y., Schullery, D., Kawata, Y., Shnyreva, M., Abrass, C., Bomsztyk, K.
(2002). Synergistic activation of the rat laminin {gamma}1 chain promoter by the gut-enriched Kruppel-like factor (GKLF/KLF4) and Sp1. Nucleic Acids Res
30: 2270-2279
[Abstract]
[Full Text]
-
Kondrashov, A. S., Shabalina, S. A.
(2002). Classification of common conserved sequences in mammalian intergenic regions. Hum Mol Genet
11: 669-674
[Abstract]
[Full Text]
-
Malakooti, J., Memark, V. C., Dudeja, P. K., Ramaswamy, K.
(2002). Molecular cloning and functional analysis of the human Na+/H+ exchanger NHE3 promoter. Am. J. Physiol. Gastrointest. Liver Physiol.
282: G491-G500
[Abstract]
[Full Text]
-
Hullinger, T. G., Panek, R. L., Xu, X., Karathanasis, S. K.
(2001). p21-activated Kinase-1 (PAK1) Inhibition of the Human Scavenger Receptor Class B, Type I Promoter in Macrophages Is Independent of PAK1 Kinase Activity, but Requires the GTPase-binding Domain. J. Biol. Chem.
276: 46807-46814
[Abstract]
[Full Text]
-
Liu, S., Guo, R., Quarles, L. D.
(2001). Cloning and Characterization of the Proximal Murine Phex Promoter. Endocrinology
142: 3987-3995
[Abstract]
[Full Text]
-
Gaboli, M., Kotsi, P. A., Gurrieri, C., Cattoretti, G., Ronchetti, S., Cordon-Cardo, C., Broxmeyer, H. E., Hromas, R., Pandolfi, P. P.
(2001). Mzf1 controls cell proliferation and tumorigenesis. Genes Dev.
15: 1625-1630
[Abstract]
[Full Text]
-
Collins, T., Stone, J. R., Williams, A. J.
(2001). All in the Family: the BTB/POZ, KRAB, and SCAN Domains. Mol. Cell. Biol.
21: 3609-3615
[Full Text]
-
Asano, E., Kuivaniemi, H., Mahbubul Huq, A.H.M., Tromp, G., Behen, M., Rothermel, R., Herron, J., Chugani, D. C.
(2001). A Study of Novel Polymorphisms in the Upstream Region of Vasoactive Intestinal Peptide Receptor Type 2 Gene in Autism. J Child Neurol
16: 357-363
[Abstract]
-
Malakooti, J., Dahdal, R. Y., Dudeja, P. K., Layden, T. J., Ramaswamy, K.
(2001). The human Na+/H+ exchanger NHE2 gene: genomic organization and promoter characterization. Am. J. Physiol. Gastrointest. Liver Physiol.
280: G763-G773
[Abstract]
[Full Text]
-
Harder, J., Meyer-Hoffert, U., Teran, L. M., Schwichtenberg, L., Bartels, J., Maune, S., Schröder, J.-M.
(2000). Mucoid Pseudomonas aeruginosa, TNF-alpha , and IL-1beta , but Not IL-6, Induce Human beta -Defensin-2 in Respiratory Epithelia. Am. J. Respir. Cell Mol. Bio.
22: 714-721
[Abstract]
[Full Text]
-
Sander, T. L., Haas, A. L., Peterson, M. J., Morris, J. F.
(2000). Identification of a Novel SCAN Box-related Protein That Interacts with MZF1B. THE LEUCINE-RICH SCAN BOX MEDIATES HETERO- AND HOMOPROTEIN ASSOCIATIONS. J. Biol. Chem.
275: 12857-12867
[Abstract]
[Full Text]
-
Means, A. L., Thompson, J. R., Gudas, L. J.
(2000). Transcriptional Regulation of the Cellular Retinoic Acid Binding Protein I Gene in F9 Teratocarcinoma Cells. Cell Growth Differ.
11: 71-82
[Abstract]
[Full Text]
-
Ma, L, Merenmies, J, Parada, L.
(2000). Molecular characterization of the TrkA/NGF receptor minimal enhancer reveals regulation by multiple cis elements to drive embryonic neuron expression. Development
127: 3777-3788
[Abstract]
-
Ponomarenko, J. V., Orlova, G. V., Ponomarenko, M. P., Lavryushev, S. V., Frolov, A. S., Zybova, S. V., Kolchanov, N. A.
(2000). SELEX_DB: an activated database on selected randomized DNA/RNA sequences addressed to genomic sequence annotation. Nucleic Acids Res
28: 205-208
[Abstract]
[Full Text]
-
Sinn, P. L., Zhang, X., Sigmund, C. D.
(1999). JG cell expression and partial regulation of a human renin genomic transgene driven by a minimal renin promoter. Am. J. Physiol. Renal Physiol.
277: F634-F642
[Abstract]
[Full Text]
-
Kida, M., Souri, M., Yamamoto, M., Saito, H., Ichinose, A.
(1999). Transcriptional Regulation of Cell Type-specific Expression of the TATA-less A Subunit Gene for Human Coagulation Factor XIII. J. Biol. Chem.
274: 6138-6147
[Abstract]
[Full Text]
-
Bockamp, E.-O., Fordham, J. L., Gottgens, B., Murrell, A. M., Sanchez, M.-J., Green, A. R.
(1998). Transcriptional Regulation of the Stem Cell Leukemia Gene by PU.1 and Elf-1. J. Biol. Chem.
273: 29032-29042
[Abstract]
[Full Text]
-
Melkonyan, H., Hofmann, H. A., Nacken, W., Sorg, C., Klempt, M.
(1998). The Gene Encoding the Myeloid-related Protein 14 (MRP14), a Calcium-binding Protein Expressed in Granulocytes and Monocytes, Contains a Potent Enhancer Element in the First Intron. J. Biol. Chem.
273: 27026-27032
[Abstract]
[Full Text]
-
Gobin, S. J. P., Keijsers, V., van Zutphen, M., van den Elsen, P. J.
(1998). The Role of Enhancer A in the Locus-Specific Transactivation of Classical and Nonclassical HLA Class I Genes by Nuclear Factor {kappa}B. J. Immunol.
161: 2276-2283
[Abstract]
[Full Text]
-
Gotoh, K., Yokota, H., Kikuya, E., Watanabe, T., Oishi, M.
(1998). Genomic Structure of MUNC18-1 Protein, Which Is Involved in Docking and Fusion of Synaptic Vesicles in Brain. J. Biol. Chem.
273: 21642-21647
[Abstract]
[Full Text]
-
Kishimoto, H., Hoshino, S.-i., Ohori, M., Kontani, K., Nishina, H., Suzawa, M., Kato, S., Katada, T.
(1998). Molecular Mechanism of Human CD38 Gene Expression by Retinoic Acid. IDENTIFICATION OF RETINOIC ACID RESPONSE ELEMENT IN THE FIRST INTRON. J. Biol. Chem.
273: 15429-15434
[Abstract]
[Full Text]
-
Jin, P., Sun, Y., Grabowski, G. A.
(1998). Role of Sp Proteins and RORalpha in Transcription Regulation of Murine Prosaposin. J. Biol. Chem.
273: 13208-13216
[Abstract]
[Full Text]
-
Murai, K., Murakami, H., Nagata, S.
(1998). Myeloid-specific transcriptional activation by murine myeloid zinc-finger protein 2. Proc. Natl. Acad. Sci. USA
95: 3461-3466
[Abstract]
[Full Text]
-
Uchida, S., Rai, T., Yatsushige, H., Matsumura, Y., Kawasaki, M., Sasaki, S., Marumo, F.
(1998). Isolation and characterization of kidney-specific ClC-K1 chloride channel gene promoter. Am. J. Physiol. Renal Physiol.
274: F602-F610
[Abstract]
[Full Text]
-
Huang, L., Grammatikakis, N., Toole, B. P.
(1998). Organization of the Chick CDC37 Gene. J. Biol. Chem.
273: 3598-3603
[Abstract]
[Full Text]
-
Tenen, D. G., Hromas, R., Licht, J. D., Zhang, D.-E.
(1997). Transcription Factors, Normal Myeloid Development, and Leukemia. Blood
90: 489-519
[Full Text]
-
Rao, N. V., Rao, G. V., Hoidal, J. R.
(1997). Human Dipeptidyl-peptidase I. GENE CHARACTERIZATION, LOCALIZATION, AND EXPRESSION. J. Biol. Chem.
272: 10260-10265
[Abstract]
[Full Text]
-
Le, F., Groshan, K., Zeng, X. P., Richelson, E.
(1997). Characterization of the Genomic Structure, Promoter Region, and a Tetranucleotide Repeat Polymorphism of the Human Neurotensin Receptor Gene. J. Biol. Chem.
272: 1315-1322
[Abstract]
[Full Text]
-
Shields, J. M., Christy, R. J., Yang, V. W.
(1996). Identification and Characterization of a Gene Encoding a Gut-enriched Kruppel-like Factor Expressed during Growth Arrest. J. Biol. Chem.
271: 20009-20017
[Abstract]
[Full Text]
-
Laumonnier, Y., Nadaud, S., Agrapart, M., Soubrier, F.
(2000). Characterization of an Upstream Enhancer Region in the Promoter of the Human Endothelial Nitric-oxide Synthase Gene. J. Biol. Chem.
275: 40732-40741
[Abstract]
[Full Text]
-
Wagner, S., Hess, M. A., Ormonde-Hanson, P., Malandro, J., Hu, H., Chen, M., Kehrer, R., Frodsham, M., Schumacher, C., Beluch, M., Honer, C., Skolnick, M., Ballinger, D., Bowen, B. R.
(2000). A Broad Role for the Zinc Finger Protein ZNF202 in Human Lipid Metabolism. J. Biol. Chem.
275: 15685-15690
[Abstract]
[Full Text]
Copyright © 1994 by the American Society for Microbiology. All rights reserved.