Mol Cell Biol. 1994 July; 14(7): 4522-4531
CCR4 is a glucose-regulated transcription factor whose leucine-rich repeat binds several proteins important for placing CCR4 in its proper promoter context.
M P Draper,
H Y Liu,
A H Nelsbach,
S P Mosley and
C L Denis
Department of Biochemistry and Molecular Biology, University of New Hampshire, Durham 03824.
ABSTRACT
The yeast CCR4 protein is required for the expression of a number of genes involved in nonfermentative growth, including glucose-repressible ADH2, and is the only known suppressor of mutations in the SPT6 and SPT10 genes, two genes which are believed to be involved in chromatin maintenance. We show here that although CCR4 did not bind DNA under the conditions tested, it was able to activate transcription when fused to a heterologous DNA-binding domain. The transcriptional activation ability of CCR4, in contrast to that of many other activators, was glucose regulated. Two activation domains one of which was glucose responsive and encompassed a glutamine-proline-rich region similar to that found in other eukaryotic transcriptional factors were identified. The two transactivation regions, when separated from the leucine-rich repeat and the C terminus of CCR4, were unable to complement a defective ccr4 allele, suggesting that the leucine-rich repeat and the C terminus make contacts that link the activation regions to the proper gene context. Native immunoprecipitation of CCR4 revealed that CCR4 was complexed with at least four other proteins. The leucine-rich repeat of CCR4 was both necessary and sufficient for interaction with at least two of these factors. We propose that the leucine-rich repeat links CCR4 through its associated factors to its promoter context at ADH2 and other loci where it is required for proper transcriptional regulation.
Mol Cell Biol. 1994 July; 14(7): 4522-4531
This article has been cited by other articles:
-
Schwede, A., Ellis, L., Luther, J., Carrington, M., Stoecklin, G., Clayton, C.
(2008). A role for Caf1 in mRNA deadenylation and decay in trypanosomes and human cells. Nucleic Acids Res
36: 3374-3388
[Abstract]
[Full Text]
-
Chuang, C.-L., Jen, C.-H., Chen, C.-M., Shieh, G. S.
(2008). A pattern recognition approach to infer time-lagged genetic interactions. Bioinformatics
24: 1183-1190
[Abstract]
[Full Text]
-
Wagner, E., Clement, S. L., Lykke-Andersen, J.
(2007). An Unconventional Human Ccr4-Caf1 Deadenylase Complex in Nuclear Cajal Bodies. Mol. Cell. Biol.
27: 1686-1695
[Abstract]
[Full Text]
-
Mazzoni, C., Serafini, A., Falcone, C.
(2005). The Inactivation of KlNOT4, a Kluyveromyces lactis Gene Encoding a Component of the CCR4-NOT Complex, Reveals New Regulatory Functions. Genetics
170: 1023-1032
[Abstract]
[Full Text]
-
Morris, J. Z., Hong, A., Lilly, M. A., Lehmann, R.
(2005). twin, a CCR4 homolog, regulates cyclin poly(A) tail length to permit Drosophila oogenesis. Development
132: 1165-1174
[Abstract]
[Full Text]
-
Berthet, C., Morera, A.-M., Asensio, M.-J., Chauvin, M.-A., Morel, A.-P., Dijoud, F., Magaud, J.-P., Durand, P., Rouault, J.-P.
(2004). CCR4-Associated Factor CAF1 Is an Essential Factor for Spermatogenesis. Mol. Cell. Biol.
24: 5808-5820
[Abstract]
[Full Text]
-
Clark, L. B., Viswanathan, P., Quigley, G., Chiang, Y.-C., McMahon, J. S., Yao, G., Chen, J., Nelsbach, A., Denis, C. L.
(2004). Systematic Mutagenesis of the Leucine-rich Repeat (LRR) Domain of CCR4 Reveals Specific Sites for Binding to CAF1 and a Separate Critical Role for the LRR in CCR4 Deadenylase Activity. J. Biol. Chem.
279: 13616-13623
[Abstract]
[Full Text]
-
Viswanathan, P., Chen, J., Chiang, Y.-C., Denis, C. L.
(2003). Identification of Multiple RNA Features That Influence CCR4 Deadenylation Activity. J. Biol. Chem.
278: 14949-14955
[Abstract]
[Full Text]
-
Wu, K., Wu, P., Aris, J. P.
(2001). Nucleolar protein Nop12p participates in synthesis of 25S rRNA in Saccharomyces cerevisiae. Nucleic Acids Res
29: 2938-2949
[Abstract]
[Full Text]
-
Denis, C. L., Chiang, Y.-C., Cui, Y., Chen, J.
(2001). Genetic Evidence Supports a Role for the Yeast CCR4-NOT Complex in Transcriptional Elongation. Genetics
158: 627-634
[Abstract]
[Full Text]
-
Chan, T.-F., Carvalho, J., Riles, L., Zheng, X. F. S.
(2000). A chemical genomics approach toward understanding the global functions of the target of rapamycin protein (TOR). Proc. Natl. Acad. Sci. USA
10.1073/pnas.240444197v1
[Abstract]
[Full Text]
-
Badarinarayana, V., Chiang, Y.-C., Denis, C. L.
(2000). Functional Interaction of CCR4-NOT Proteins With TATAA-Binding Protein (TBP) and Its Associated Factors in Yeast. Genetics
155: 1045-1054
[Abstract]
[Full Text]
-
Albert, T. K., Lemaire, M., van Berkum, N. L., Gentz, R., Collart, M. A., Timmers, H. Th. M.
(2000). Isolation and characterization of human orthologs of yeast CCR4-NOT complex subunits. Nucleic Acids Res
28: 809-817
[Abstract]
[Full Text]
-
Dupressoir, A., Barbot, W., Loireau, M.-P., Heidmann, T.
(1999). Characterization of a Mammalian Gene Related to the Yeast CCR4 General Transcription Factor and Revealed by Transposon Insertion. J. Biol. Chem.
274: 31068-31075
[Abstract]
[Full Text]
-
Bai, Y., Salvadore, C., Chiang, Y.-C., Collart, M. A., Liu, H.-Y., Denis, C. L.
(1999). The CCR4 and CAF1 Proteins of the CCR4-NOT Complex Are Physically and Functionally Separated from NOT2, NOT4, and NOT5. Mol. Cell. Biol.
19: 6642-6651
[Abstract]
[Full Text]
-
Lee, J. H., Van Montagu, M., Verbruggen, N.
(1999). A highly conserved kinase is an essential component for stress tolerance in yeast and plant cells. Proc. Natl. Acad. Sci. USA
96: 5873-5877
[Abstract]
[Full Text]
-
Brewster, N. K., Johnston, G. C., Singer, R. A.
(1998). Characterization of the CP Complex, an Abundant Dimer of Cdc68 and Pob3 Proteins That Regulates Yeast Transcriptional Activation and Chromatin Repression. J. Biol. Chem.
273: 21972-21979
[Abstract]
[Full Text]
-
Gancedo, J. M.
(1998). Yeast Carbon Catabolite Repression. Microbiol. Mol. Biol. Rev.
62: 334-361
[Abstract]
[Full Text]
-
Hampsey, M.
(1998). Molecular Genetics of the RNA Polymerase II General Transcriptional Machinery. Microbiol. Mol. Biol. Rev.
62: 465-503
[Abstract]
[Full Text]
-
Masson, J.-Y., Ramotar, D.
(1998). The Transcriptional Activator Imp2p Maintains Ion Homeostasis in Saccharomyces cerevisiae. Genetics
149: 893-901
[Abstract]
[Full Text]
-
Komarnitsky, S. I., Chiang, Y.-C., Luca, F. C., Chen, J., Toyn, J. H., Winey, M., Johnston, L. H., Denis, C. L.
(1998). DBF2 Protein Kinase Binds to and Acts through the Cell Cycle-Regulated MOB1 Protein. Mol. Cell. Biol.
18: 2100-2107
[Abstract]
[Full Text]
-
Mahalingam, S., Ayyavoo, V., Patel, M., Kieber-Emmons, T., Kao, G. D., Muschel, R. J., Weiner, D. B.
(1998). HIV-1 Vpr interacts with a human 34-kDa mov34 homologue, a cellular factor linked to the G2/M phase transition of the mammalian cell cycle. Proc. Natl. Acad. Sci. USA
95: 3419-3424
[Abstract]
[Full Text]
-
Verdone, L., Cesari, F., Denis, C. L., Di Mauro, E., Caserta, M.
(1997). Factors Affecting Saccharomyces cerevisiae ADH2 Chromatin Remodeling and Transcription. J. Biol. Chem.
272: 30828-30834
[Abstract]
[Full Text]
-
Puech, A., Dupressoir, A., Loireau, M.-P., Mattei, M.-G., Heidmann, T.
(1997). Characterization of Two Age-induced Intracisternal A-particle-related Transcripts in the Mouse Liver. TRANSCRIPTIONAL READ-THROUGH INTO AN OPEN READING FRAME WITH SIMILARITIES TO THE YEAST CCR4 TRANSCRIPTION FACTOR. J. Biol. Chem.
272: 5995-6003
[Abstract]
[Full Text]
-
Chiang, Y.-C., Komarnitsky, P., Chase, D., Denis, C. L.
(1996). ADR1 Activation Domains Contact the Histone Acetyltransferase GCN5 and the Core Transcriptional Factor TFIIB. J. Biol. Chem.
271: 32359-32365
[Abstract]
[Full Text]
-
Green, C. B., Besharse, J. C.
(1996). Identification of a novel vertebrate circadian clock-regulated gene encoding the protein nocturnin. Proc. Natl. Acad. Sci. USA
93: 14884-14888
[Abstract]
[Full Text]
-
Luján, H. D., Mowatt, M. R., Conrad, J. T., Bowers, B., Nash, T. E.
(1995). Identification of a Novel Giardia lamblia Cyst Wall Protein with Leucine-rich Repeats. J. Biol. Chem.
270: 29307-29313
[Abstract]
[Full Text]
-
Pype, S., Declercq, W., Ibrahimi, A., Michiels, C., Van Rietschoten, J. G. I., Dewulf, N., de Boer, M., Vandenabeele, P., Huylebroeck, D., Remacle, J. E.
(2000). TTRAP, a Novel Protein That Associates with CD40, Tumor Necrosis Factor (TNF) Receptor-75 and TNF Receptor-associated Factors (TRAFs), and That Inhibits Nuclear Factor-kappa B Activation. J. Biol. Chem.
275: 18586-18593
[Abstract]
[Full Text]
-
Liu, H.-Y., Chiang, Y.-C., Pan, J., Chen, J., Salvadore, C., Audino, D. C., Badarinarayana, V., Palaniswamy, V., Anderson, B., Denis, C. L.
(2001). Characterization of CAF4 and CAF16 Reveals a Functional Connection between the CCR4-NOT Complex and a Subset of SRB Proteins of the RNA Polymerase II Holoenzyme. J. Biol. Chem.
276: 7541-7548
[Abstract]
[Full Text]
-
Hanzawa, H., de Ruwe, M. J., Albert, T. K., van der Vliet, P. C., Timmers, H. T. M., Boelens, R.
(2001). The Structure of the C4C4 RING Finger of Human NOT4 Reveals Features Distinct from Those of C3HC4 RING Fingers. J. Biol. Chem.
276: 10185-10190
[Abstract]
[Full Text]
-
Chan, T.-F., Carvalho, J., Riles, L., Zheng, X. F. S.
(2000). A chemical genomics approach toward understanding the global functions of the target of rapamycin protein (TOR). Proc. Natl. Acad. Sci. USA
97: 13227-13232
[Abstract]
[Full Text]
Copyright © 1994 by the American Society for Microbiology. All rights reserved.