Molecular and Cellular Biology, December 1998, p. 7521-7527, Vol. 18, No. 12
0270-7306/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.


Department of Molecular and Cell Biology, The University of Texas at Dallas, Richardson, Texas 75080
Received 8 June 1998/Returned for modification 27 July 1998/Accepted 16 August 1998
tRNAs encoded on the mitochondrial DNA of Physarum
polycephalum and Didymium nigripes require
insertional editing for their maturation. Editing consists of the
specific insertion of a single cytidine or uridine relative to the
mitochondrial DNA sequence encoding the tRNA. Editing sites are at 14 different locations in nine tRNAs. Cytidine insertion sites can be
located in any of the four stems of the tRNA cloverleaf and usually
create a G · C base pair. Uridine insertions have been identified
in the T loop of tRNALys from Didymium and
tRNAGlu from Physarum. In both tRNAs, the
insertion creates the GUUC sequence, which is converted to GT
C (
= pseudouridine) in most tRNAs. This type of tRNA editing is different
from other, previously described types of tRNA editing and
resembles the mRNA and rRNA editing in Physarum and
Didymium. Analogous tRNAs in
Physarum and Didymium have editing
sites at different locations, indicating that editing sites have
been lost, gained, or both since the divergence of
Physarum and Didymium. Although cDNAs derived
from single tRNAs are generally fully edited, cDNAs derived
from unprocessed polycistronic tRNA precursors often lack some of the
editing site insertions. This enrichment of partially edited sequences
in unprocessed tRNAs may indicate that editing is required for tRNA
processing or at least that RNA editing occurs as an early event in
tRNA synthesis.
Present address: Betagene, Dallas, TX 75207.
Present address: Department of Surgery, National University of
Singapore, Singapore 119260.
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