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Mol Cell Biol, June 1998, p. 3376-3383, Vol. 18, No. 6
Istituto Pasteur-Fondazione Cenci Bolognetti,
Dipartimento di Genetica e Biologia Molecolare, Università
"La Sapienza," Rome, Italy
Received 22 January 1998/Returned for modification 23 February
1998/Accepted 24 March 1998
Many small nucleolar RNAs (snoRNAs) are encoded within introns of
protein-encoding genes and are released by processing of their host
pre-mRNA. We have investigated the mechanism of processing of the yeast
U18 snoRNA, which is found in the intron of the gene coding for
translational elongation factor EF-1
0270-7306/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
Processing of the Intron-Encoded U18 Small
Nucleolar RNA in the Yeast Saccharomyces cerevisiae
Relies on Both Exo- and Endonucleolytic Activities
. We have focused our analysis
on the relationship between splicing of the EF-1
pre-mRNA and
production of the mature snoRNA. Mutations inhibiting splicing of the
EF-1
pre-mRNA have been shown to produce normal U18 snoRNA levels
together with the accumulation of intermediates deriving from the
pre-mRNA, thus indicating that the precursor is an efficient processing
substrate. Inhibition of 5'
3' exonucleases obtained by insertion of
G cassettes or by the use of a rat1-1 xrn1
mutant strain
does not impair U18 release. In the Exo
strain, 3' cutoff
products, diagnostic of an endonuclease-mediated processing pathway,
were detected. Our data indicate that biosynthesis of the yeast U18
snoRNA relies on two different pathways, depending on both
exonucleolytic and endonucleolytic activities: a major processing
pathway based on conversion of the debranched intron and a minor one
acting by endonucleolytic cleavage of the pre-mRNA.
*
Corresponding author. Mailing address: Istituto
Pasteur-Fondazione Cenci Bolognetti, Dipartimento di Genetica e
Biologia Molecolare, Università "La Sapienza," P. le A. Moro
5, 00185 Rome, Italy. Phone: 39-6-49912202. Fax: 39-6-49912500. E-mail:
bozzoni{at}axcasp.caspur.it.
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