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Molecular and Cellular Biology, October 1999, p. 6479-6487, Vol. 19, No. 10
Departments of Genetics and Surgery, Center
for Genetic and Cellular Therapies, Duke University Medical Center,
Durham, North Carolina 27710
Received 14 April 1999/Returned for modification 16 May
1999/Accepted 30 June 1999
Recent reports have demonstrated that the group I ribozyme from
Tetrahymena thermophila can perform
trans-splicing reactions to repair mutant RNAs. For
therapeutic use, such ribozymes must function efficiently when
transcribed from genes delivered to human cells, yet it is unclear how
group I splicing reactions are influenced by intracellular expression
of the ribozyme. Here we evaluate the self-splicing efficiency of group
I introns from transcripts expressed by RNA polymerase II in human
cells to directly measure ribozyme catalysis in a therapeutically
relevant setting. Intron-containing expression cassettes were
transfected into a human cell line, and RNA transcripts were analyzed
for intron removal. The percentage of transcripts that underwent
self-splicing ranged from 0 to 50%, depending on the construct being
tested. Thus, self-splicing activity is supported in the mammalian
cellular environment. However, we find that the extent of self-splicing is greatly influenced by sequences flanking the intron and presumably reflects differences in the intron's ability to fold into an active conformation inside the cell. In support of this hypothesis, we show
that the ability of the intron to fold and self-splice from cellular
transcripts in vitro correlates well with the catalytic efficiency
observed from the same transcripts expressed inside cells. These
results underscore the importance of evaluating the impact of sequence
context on the activity of therapeutic group I ribozymes. The
self-splicing system that we describe should facilitate these efforts
as well as aid in efforts at enhancing in vivo ribozyme activity for
various applications of RNA repair.
0270-7306/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Evaluating Group I Intron Catalytic Efficiency in
Mammalian Cells
*
Corresponding author. Mailing address: Box 2601 DUMC,
Durham, NC 27710. Phone: (919) 684-6375. Fax: (919) 684-6492. E-mail: sulle001{at}mc.duke.edu.
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