Previous Article | Next Article 
Molecular and Cellular Biology, June 1999, p. 4143-4152, Vol. 19, No. 6
0270-7306/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Accumulation of Single-Stranded DNA and Destabilization of
Telomeric Repeats in Yeast Mutant Strains Carrying a Deletion
of RAD27
Julie
Parenteau and
Raymund J.
Wellinger*
Département de Microbiologie et
Infectiologie, Faculté de Médecine, Université de
Sherbrooke, Sherbrooke, Quebec, J1H 5N4, Canada
Received 30 November 1998/Returned for modification 13 January
1999/Accepted 26 March 1999
The Saccharomyces cerevisiae RAD27 gene encodes the
yeast homologue of the mammalian FEN-1 nuclease, a protein that is
thought to be involved in the processing of Okazaki fragments during
DNA lagging-strand synthesis. One of the predicted DNA lesions
occurring in rad27 strains is the presence of
single-stranded DNA of the template strand for lagging-strand
synthesis. We examined this prediction by analyzing the terminal DNA
structures generated during telomere replication in rad27
strains. The lengths of the telomeric repeat tracts were found to be
destabilized in rad27 strains, indicating that naturally
occurring direct repeats are subject to tract expansions and
contractions in such strains. Furthermore, abnormally high levels of
single-stranded DNA of the templating strand for lagging-strand
synthesis were observed in rad27 cells. Overexpression of
Dna2p in wild-type cells also yielded single-stranded DNA regions on
telomeric DNA and caused a cell growth arrest phenotype virtually
identical to that seen for rad27 cells grown at the
restrictive temperature. Furthermore, overexpression of the yeast
exonuclease Exo1p alleviated the growth arrest induced by both
conditions, overexpression of Dna2p and incubation of rad27
cells at 37°C. However, the telomere heterogeneity and the appearance
of single-stranded DNA are not prevented by the overexpression of Exo1p
in these strains, suggesting that this nuclease is not simply redundant
with Rad27p. Our data thus provide in vivo evidence for the types of
DNA lesions predicted to occur when lagging-strand synthesis is
deficient and suggest that Dna2p and Rad27p collaborate in the
processing of Okazaki fragments.
*
Corresponding author. Mailing address:
Département de Microbiologie et Infectiologie, Faculté de
Médecine, Université de Sherbrooke, 3001 12 Ave. Nord,
Sherbrooke, Quebec, J1H 5N4, Canada. Phone: (819) 564-2514. Fax:
(819) 564-5392. E-mail: rwelli01{at}courrier.usherb.ca.
Molecular and Cellular Biology, June 1999, p. 4143-4152, Vol. 19, No. 6
0270-7306/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
This article has been cited by other articles:
-
Karanja, K. K., Livingston, D. M.
(2009). C-Terminal Flap Endonuclease (rad27) Mutations: Lethal Interactions With a DNA Ligase I Mutation (cdc9-p) and Suppression by Proliferating Cell Nuclear Antigen (POL30) in Saccharomyces cerevisiae. Genetics
183: 63-78
[Abstract]
[Full Text]
-
Kang, Y.-H., Kang, M.-J., Kim, J.-H., Lee, C.-H., Cho, I.-t., Hurwitz, J., Seo, Y.-S.
(2009). The MPH1 Gene of Saccharomyces cerevisiae Functions in Okazaki Fragment Processing. J. Biol. Chem.
284: 10376-10386
[Abstract]
[Full Text]
-
Sampathi, S., Bhusari, A., Shen, B., Chai, W.
(2009). Human Flap Endonuclease I Is in Complex with Telomerase and Is Required for Telomerase-mediated Telomere Maintenance. J. Biol. Chem.
284: 3682-3690
[Abstract]
[Full Text]
-
Mito, E., Mokhnatkin, J. V., Steele, M. C., Buettner, V. L., Sommer, S. S., Manthey, G. M., Bailis, A. M.
(2008). Mutagenic and Recombinagenic Responses to Defective DNA Polymerase {delta} Are Facilitated by the Rev1 Protein in pol3-t Mutants of Saccharomyces cerevisiae. Genetics
179: 1795-1806
[Abstract]
[Full Text]
-
Chen, X. L., Silver, H. R., Xiong, L., Belichenko, I., Adegite, C., Johnson, E. S.
(2007). Topoisomerase I-Dependent Viability Loss in Saccharomyces cerevisiae Mutants Defective in Both SUMO Conjugation and DNA Repair. Genetics
177: 17-30
[Abstract]
[Full Text]
-
Navarro, M. S., Bi, L., Bailis, A. M.
(2007). A Mutant Allele of the Transcription Factor IIH Helicase Gene, RAD3, Promotes Loss of Heterozygosity in Response to a DNA Replication Defect in Saccharomyces cerevisiae. Genetics
176: 1391-1402
[Abstract]
[Full Text]
-
Budd, M. E., Reis, C. C., Smith, S., Myung, K., Campbell, J. L.
(2006). Evidence Suggesting that Pif1 Helicase Functions in DNA Replication with the Dna2 Helicase/Nuclease and DNA Polymerase {delta}.. Mol. Cell. Biol.
26: 2490-2500
[Abstract]
[Full Text]
-
Banerjee, S., Smith, S., Myung, K.
(2006). Suppression of gross chromosomal rearrangements by yKu70-yKu80 heterodimer through DNA damage checkpoints. Proc. Natl. Acad. Sci. USA
103: 1816-1821
[Abstract]
[Full Text]
-
Kim, J.-H., Kim, H.-D., Ryu, G.-H., Kim, D.-H., Hurwitz, J., Seo, Y.-S.
(2006). Isolation of human Dna2 endonuclease and characterization of its enzymatic properties.. Nucleic Acids Res
34: 1854-1864
[Abstract]
[Full Text]
-
Farah, J. A., Cromie, G., Davis, L., Steiner, W. W., Smith, G. R.
(2005). Activation of an Alternative, Rec12 (Spo11)-Independent Pathway of Fission Yeast Meiotic Recombination in the Absence of a DNA Flap Endonuclease. Genetics
171: 1499-1511
[Abstract]
[Full Text]
-
Bhattacharyya, S., Lahue, R. S.
(2005). Srs2 Helicase of Saccharomyces cerevisiae Selectively Unwinds Triplet Repeat DNA. J. Biol. Chem.
280: 33311-33317
[Abstract]
[Full Text]
-
Tomita, K., Kibe, T., Kang, H.-Y., Seo, Y.-S., Uritani, M., Ushimaru, T., Ueno, M.
(2004). Fission Yeast Dna2 Is Required for Generation of the Telomeric Single-Strand Overhang. Mol. Cell. Biol.
24: 9557-9567
[Abstract]
[Full Text]
-
Du, X., Shen, J., Kugan, N., Furth, E. E., Lombard, D. B., Cheung, C., Pak, S., Luo, G., Pignolo, R. J., DePinho, R. A., Guarente, L., Johnson, F. B.
(2004). Telomere Shortening Exposes Functions for the Mouse Werner and Bloom Syndrome Genes. Mol. Cell. Biol.
24: 8437-8446
[Abstract]
[Full Text]
-
Liu, Y., Zhang, H., Veeraraghavan, J., Bambara, R. A., Freudenreich, C. H.
(2004). Saccharomyces cerevisiae Flap Endonuclease 1 Uses Flap Equilibration To Maintain Triplet Repeat Stability. Mol. Cell. Biol.
24: 4049-4064
[Abstract]
[Full Text]
-
Lesur, I., Campbell, J. L.
(2004). The Transcriptome of Prematurely Aging Yeast Cells Is Similar to That of Telomerase-deficient Cells. Mol. Biol. Cell
15: 1297-1312
[Abstract]
[Full Text]
-
Smolikov, S., Mazor, Y., Krauskopf, A.
(2004). ELG1, a regulator of genome stability, has a role in telomere length regulation and in silencing. Proc. Natl. Acad. Sci. USA
101: 1656-1661
[Abstract]
[Full Text]
-
Sharma, S., Otterlei, M., Sommers, J. A., Driscoll, H. C., Dianov, G. L., Kao, H.-I, Bambara, R. A., Brosh, R. M. Jr.
(2004). WRN Helicase and FEN-1 Form a Complex upon Replication Arrest and Together Process Branchmigrating DNA Structures Associated with the Replication Fork. Mol. Biol. Cell
15: 734-750
[Abstract]
[Full Text]
-
Hackett, J. A., Greider, C. W.
(2003). End Resection Initiates Genomic Instability in the Absence of Telomerase. Mol. Cell. Biol.
23: 8450-8461
[Abstract]
[Full Text]
-
Callahan, J. L., Andrews, K. J., Zakian, V. A., Freudenreich, C. H.
(2003). Mutations in Yeast Replication Proteins That Increase CAG/CTG Expansions Also Increase Repeat Fragility. Mol. Cell. Biol.
23: 7849-7860
[Abstract]
[Full Text]
-
Larsen, E., Gran, C., Saether, B. E., Seeberg, E., Klungland, A.
(2003). Proliferation Failure and Gamma Radiation Sensitivity of Fen1 Null Mutant Mice at the Blastocyst Stage. Mol. Cell. Biol.
23: 5346-5353
[Abstract]
[Full Text]
-
Dahlen, M., Sunnerhagen, P., Wang, T. S.-F.
(2003). Replication Proteins Influence the Maintenance of Telomere Length and Telomerase Protein Stability. Mol. Cell. Biol.
23: 3031-3042
[Abstract]
[Full Text]
-
Ayyagari, R., Gomes, X. V., Gordenin, D. A., Burgers, P. M. J.
(2003). Okazaki Fragment Maturation in Yeast. I. DISTRIBUTION OF FUNCTIONS BETWEEN FEN1 AND DNA2. J. Biol. Chem.
278: 1618-1625
[Abstract]
[Full Text]
-
Jin, Y. H., Ayyagari, R., Resnick, M. A., Gordenin, D. A., Burgers, P. M. J.
(2003). Okazaki Fragment Maturation in Yeast. II. COOPERATION BETWEEN THE POLYMERASE AND 3'-5'-EXONUCLEASE ACTIVITIES OF POL delta IN THE CREATION OF A LIGATABLE NICK. J. Biol. Chem.
278: 1626-1633
[Abstract]
[Full Text]
-
Parenteau, J., Wellinger, R. J.
(2002). Differential Processing of Leading- and Lagging-Strand Ends at Saccharomyces cerevisiae Telomeres Revealed by the Absence of Rad27p Nuclease. Genetics
162: 1583-1594
[Abstract]
[Full Text]
-
Bae, S.-H., Kim, D. W., Kim, J., Kim, J.-H., Kim, D.-H., Kim, H.-D., Kang, H.-Y., Seo, Y.-S.
(2002). Coupling of DNA Helicase and Endonuclease Activities of Yeast Dna2 Facilitates Okazaki Fragment Processing. J. Biol. Chem.
277: 26632-26641
[Abstract]
[Full Text]
-
Wei, C., Skopp, R., Takata, M., Takeda, S., Price, C. M.
(2002). Effects of double-strand break repair proteins on vertebrate telomere structure. Nucleic Acids Res
30: 2862-2870
[Abstract]
[Full Text]
-
Hoopes, L. L. M., Budd, M., Choe, W., Weitao, T., Campbell, J. L.
(2002). Mutations in DNA Replication Genes Reduce Yeast Life Span. Mol. Cell. Biol.
22: 4136-4146
[Abstract]
[Full Text]
-
Choe, W., Budd, M., Imamura, O., Hoopes, L., Campbell, J. L.
(2002). Dynamic Localization of an Okazaki Fragment Processing Protein Suggests a Novel Role in Telomere Replication. Mol. Cell. Biol.
22: 4202-4217
[Abstract]
[Full Text]
-
Lewis, L. K., Karthikeyan, G., Westmoreland, J. W., Resnick, M. A.
(2002). Differential Suppression of DNA Repair Deficiencies of Yeast rad50, mre11 and xrs2 Mutants by EXO1 and TLC1 (the RNA Component of Telomerase). Genetics
160: 49-62
[Abstract]
[Full Text]
-
Bae, S.-H., Kim, J.-A., Choi, E., Lee, K.-H., Kang, H.-Y., Kim, H.-D., Kim, J.-H., Bae, K.-H., Cho, Y., Park, C., Seo, Y.-S.
(2001). Tripartite structure of Saccharomyces cerevisiae Dna2 helicase/endonuclease. Nucleic Acids Res
29: 3069-3079
[Abstract]
[Full Text]
-
Negritto, M. C., Qiu, J., Ratay, D. O., Shen, B., Bailis, A. M.
(2001). Novel Function of Rad27 (FEN-1) in Restricting Short-Sequence Recombination. Mol. Cell. Biol.
21: 2349-2358
[Abstract]
[Full Text]
-
Lee, K.-H., Kim, D. W., Bae, S.-H., Kim, J.-A., Ryu, G.-H., Kwon, Y.-N., Kim, K.-A., Koo, H.-S., Seo, Y.-S.
(2000). The endonuclease activity of the yeast Dna2 enzyme is essential in vivo. Nucleic Acids Res
28: 2873-2881
[Abstract]
[Full Text]
-
Kirchner, J. M., Tran, H., Resnick, M. A.
(2000). A DNA Polymerase {epsilon} Mutant That Specifically Causes +1 Frameshift Mutations Within Homonucleotide Runs in Yeast. Genetics
155: 1623-1632
[Abstract]
[Full Text]
-
Kang, H.-Y., Choi, E., Bae, S.-H., Lee, K.-H., Gim, B.-S., Kim, H.-D., Park, C., MacNeill, S. A., Seo, Y.-S.
(2000). Genetic Analyses of Schizosaccharomyces pombe dna2+ Reveal That Dna2 Plays an Essential Role in Okazaki Fragment Metabolism. Genetics
155: 1055-1067
[Abstract]
[Full Text]
-
Chamankhah, M., Fontanie, T., Xiao, W.
(2000). The Saccharomyces cerevisiae mre11(ts) Allele Confers a Separation of DNA Repair and Telomere Maintenance Functions. Genetics
155: 569-576
[Abstract]
[Full Text]
-
Martin, A. A., Dionne, I., Wellinger, R. J., Holm, C.
(2000). The Function of DNA Polymerase alpha at Telomeric G Tails Is Important for Telomere Homeostasis. Mol. Cell. Biol.
20: 786-796
[Abstract]
[Full Text]
-
Liu, Q., Choe, W.-c., Campbell, J. L.
(2000). Identification of the Xenopus laevis Homolog of Saccharomyces cerevisiae DNA2 and Its Role in DNA Replication. J. Biol. Chem.
275: 1615-1624
[Abstract]
[Full Text]
-
DUBOIS, M.L., DIEDE, S.J., STELLWAGEN, A.E., GOTTSCHLING, D.E.
(2000). All Things Must End: Telomere Dynamics in Yeast. Cold Spring Harb Symp Quant Biol
65: 281-296
[Abstract]
-
Bae, S.-H., Seo, Y.-S.
(2000). Characterization of the Enzymatic Properties of the Yeast Dna2 Helicase/Endonuclease Suggests a New Model for Okazaki Fragment Processing. J. Biol. Chem.
275: 38022-38031
[Abstract]
[Full Text]
-
Stucki, M., Jonsson, Z. O., Hubscher, U.
(2001). In Eukaryotic Flap Endonuclease 1, the C Terminus Is Essential for Substrate Binding. J. Biol. Chem.
276: 7843-7849
[Abstract]
[Full Text]