Previous Article | Next Article 
Molecular and Cellular Biology, February 2001, p. 875-883, Vol. 21, No. 3
0270-7306/01/$04.00+0 DOI: 10.1128/MCB.21.3.875-883.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Critical Role for the Histone H4 N Terminus in
Nucleosome Remodeling by ISWI
Cedric R.
Clapier,1,2
Gernot
Längst,1
Davide F. V.
Corona,2
Peter B.
Becker,1,* and
Karl P.
Nightingale3
Adolf Butenandt-Institut, Molekularbiologie,
Ludwig-Maximilians-Universität München, 80336 Munich,1 and International Ph.D.
Programme of the European Molecular Biology Laboratory, 69117 Heidelberg,2 Germany, and Department of
Biochemistry, University of Cambridge, Cambridge CB2 1GA, United
Kingdom3
Received 1 August 2000/Returned for modification 6 September
2000/Accepted 1 November 2000
The ATPase ISWI can be considered the catalytic core of several
multiprotein nucleosome remodeling machines. Alone or in the context of
nucleosome remodeling factor, the chromatin accessibility complex
(CHRAC), or ACF, ISWI catalyzes a number of ATP-dependent transitions
of chromatin structure that are currently best explained by its ability
to induce nucleosome sliding. In addition, ISWI can function as a
nucleosome spacing factor during chromatin assembly, where it will
trigger the ordering of newly assembled nucleosomes into regular
arrays. Both nucleosome remodeling and nucleosome spacing reactions are
mechanistically unexplained. As a step toward defining the interaction
of ISWI with its substrate during nucleosome remodeling and chromatin
assembly we generated a set of nucleosomes lacking individual histone N
termini from recombinant histones. We found the conserved N termini
(the N-terminal tails) of histone H4 essential to stimulate ISWI ATPase
activity, in contrast to other histone tails. Remarkably, the H4 N
terminus, but none of the other tails, was critical for CHRAC-induced
nucleosome sliding and for the generation of regularity in nucleosomal
arrays by ISWI. Direct nucleosome binding studies did not reflect a
dependence on the H4 tail for ISWI-nucleosome interactions. We conclude
that the H4 tail is critically required for nucleosome remodeling and spacing at a step subsequent to interaction with the substrate.
*
Corresponding author. Mailing address: Adolf
Butenandt-Institut, Molekularbiologie, Schillerstr. 44, 80336 Munich,
Germany. Phone: 49-89-5996-427 (428). Fax: 49-89-5996-425. E-mail:
pbecker{at}mol-bio.med.uni-muenchen.de.
Molecular and Cellular Biology, February 2001, p. 875-883, Vol. 21, No. 3
0270-7306/01/$04.00+0 DOI: 10.1128/MCB.21.3.875-883.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
This article has been cited by other articles:
-
Baker, A. M., Fu, Q., Hayward, W., Lindsay, S. M., Fletcher, T. M.
(2009). The Myb/SANT domain of the telomere-binding protein TRF2 alters chromatin structure. Nucleic Acids Res
37: 5019-5031
[Abstract]
[Full Text]
-
Pinskaya, M., Nair, A., Clynes, D., Morillon, A., Mellor, J.
(2009). Nucleosome Remodeling and Transcriptional Repression Are Distinct Functions of Isw1 in Saccharomyces cerevisiae. Mol. Cell. Biol.
29: 2419-2430
[Abstract]
[Full Text]
-
Dang, W., Bartholomew, B.
(2007). Domain Architecture of the Catalytic Subunit in the ISW2-Nucleosome Complex. Mol. Cell. Biol.
27: 8306-8317
[Abstract]
[Full Text]
-
Rippe, K., Schrader, A., Riede, P., Strohner, R., Lehmann, E., Langst, G.
(2007). DNA sequence- and conformation-directed positioning of nucleosomes by chromatin-remodeling complexes. Proc. Natl. Acad. Sci. USA
104: 15635-15640
[Abstract]
[Full Text]
-
Fingerman, I. M., Li, H.-C., Briggs, S. D.
(2007). A charge-based interaction between histone H4 and Dot1 is required for H3K79 methylation and telomere silencing: identification of a new trans-histone pathway. Genes Dev.
21: 2018-2029
[Abstract]
[Full Text]
-
Dang, W., Kagalwala, M. N., Bartholomew, B.
(2007). The Dpb4 Subunit of ISW2 Is Anchored to Extranucleosomal DNA. J. Biol. Chem.
282: 19418-19425
[Abstract]
[Full Text]
-
Gangaraju, V. K., Bartholomew, B.
(2007). Dependency of ISW1a Chromatin Remodeling on Extranucleosomal DNA. Mol. Cell. Biol.
27: 3217-3225
[Abstract]
[Full Text]
-
Sherriff, J. A., Kent, N. A., Mellor, J.
(2007). The Isw2 Chromatin-Remodeling ATPase Cooperates with the Fkh2 Transcription Factor To Repress Transcription of the B-Type Cyclin Gene CLB2. Mol. Cell. Biol.
27: 2848-2860
[Abstract]
[Full Text]
-
Dang, W., Kagalwala, M. N., Bartholomew, B.
(2006). Regulation of ISW2 by Concerted Action of Histone H4 Tail and Extranucleosomal DNA.. Mol. Cell. Biol.
26: 7388-7396
[Abstract]
[Full Text]
-
Shogren-Knaak, M., Ishii, H., Sun, J.-M., Pazin, M. J., Davie, J. R., Peterson, C. L.
(2006). Histone H4-K16 Acetylation Controls Chromatin Structure and Protein Interactions. Science
311: 844-847
[Abstract]
[Full Text]
-
Fazzio, T. G., Gelbart, M. E., Tsukiyama, T.
(2005). Two Distinct Mechanisms of Chromatin Interaction by the Isw2 Chromatin Remodeling Complex In Vivo. Mol. Cell. Biol.
25: 9165-9174
[Abstract]
[Full Text]
-
Smith, C. L., Peterson, C. L.
(2005). A Conserved Swi2/Snf2 ATPase Motif Couples ATP Hydrolysis to Chromatin Remodeling. Mol. Cell. Biol.
25: 5880-5892
[Abstract]
[Full Text]
-
Santoro, R., Grummt, I.
(2005). Epigenetic Mechanism of rRNA Gene Silencing: Temporal Order of NoRC-Mediated Histone Modification, Chromatin Remodeling, and DNA Methylation. Mol. Cell. Biol.
25: 2539-2546
[Abstract]
[Full Text]
-
Schwanbeck, R., Xiao, H., Wu, C.
(2004). Spatial Contacts and Nucleosome Step Movements Induced by the NURF Chromatin Remodeling Complex. J. Biol. Chem.
279: 39933-39941
[Abstract]
[Full Text]
-
Nemeth, A., Strohner, R., Grummt, I., Langst, G.
(2004). The chromatin remodeling complex NoRC and TTF-I cooperate in the regulation of the mammalian rRNA genes in vivo. Nucleic Acids Res
32: 4091-4099
[Abstract]
[Full Text]
-
Strohner, R., Nemeth, A., Nightingale, K. P., Grummt, I., Becker, P. B., Langst, G.
(2004). Recruitment of the Nucleolar Remodeling Complex NoRC Establishes Ribosomal DNA Silencing in Chromatin. Mol. Cell. Biol.
24: 1791-1798
[Abstract]
[Full Text]
-
BECKER, P.B.
(2004). The Chromatin Accessibility Complex: Chromatin Dynamics through Nucleosome Sliding. Cold Spring Harb Symp Quant Biol
69: 281-288
[Abstract]
-
Sabet, N., Tong, F., Madigan, J. P., Volo, S., Smith, M. M., Morse, R. H.
(2003). Global and specific transcriptional repression by the histone H3 amino terminus in yeast. Proc. Natl. Acad. Sci. USA
100: 4084-4089
[Abstract]
[Full Text]
-
Whitehouse, I., Stockdale, C., Flaus, A., Szczelkun, M. D., Owen-Hughes, T.
(2003). Evidence for DNA Translocation by the ISWI Chromatin-Remodeling Enzyme. Mol. Cell. Biol.
23: 1935-1945
[Abstract]
[Full Text]
-
Kassabov, S. R., Henry, N. M., Zofall, M., Tsukiyama, T., Bartholomew, B.
(2002). High-Resolution Mapping of Changes in Histone-DNA Contacts of Nucleosomes Remodeled by ISW2. Mol. Cell. Biol.
22: 7524-7534
[Abstract]
[Full Text]
-
Langst, G., Becker, P. B.
(2002). Nucleosome mobilization and positioning by ISWI-containing chromatin-remodeling factors. J. Cell Sci.
114: 2561-2568
[Abstract]
[Full Text]
-
Levenstein, M. E., Kadonaga, J. T.
(2002). Biochemical Analysis of Chromatin Containing Recombinant Drosophila Core Histones. J. Biol. Chem.
277: 8749-8754
[Abstract]
[Full Text]
-
Clapier, C. R., Nightingale, K. P., Becker, P. B.
(2002). A critical epitope for substrate recognition by the nucleosome remodeling ATPase ISWI. Nucleic Acids Res
30: 649-655
[Abstract]
[Full Text]
-
Georges, S. A., Kraus, W. L., Luger, K., Nyborg, J. K., Laybourn, P. J.
(2002). p300-Mediated Tax Transactivation from Recombinant Chromatin: Histone Tail Deletion Mimics Coactivator Function. Mol. Cell. Biol.
22: 127-137
[Abstract]
[Full Text]
-
Hamiche, A., Kang, J.-G., Dennis, C., Xiao, H., Wu, C.
(2001). Histone tails modulate nucleosome mobility and regulate ATP-dependent nucleosome sliding by NURF. Proc. Natl. Acad. Sci. USA
10.1073/pnas.251421398v1
[Abstract]
[Full Text]
-
Loyola, A., LeRoy, G., Wang, Y.-H., Reinberg, D.
(2001). Reconstitution of recombinant chromatin establishes a requirement for histone-tail modifications during chromatin assembly and transcription. Genes Dev.
15: 2837-2851
[Abstract]
[Full Text]
-
Hamiche, A., Kang, J.-G., Dennis, C., Xiao, H., Wu, C.
(2001). Histone tails modulate nucleosome mobility and regulate ATP-dependent nucleosome sliding by NURF. Proc. Natl. Acad. Sci. USA
98: 14316-14321
[Abstract]
[Full Text]