Previous Article | Next Article 
Molecular and Cellular Biology, February 2001, p. 1228-1238, Vol. 21, No. 4
0270-7306/01/$04.00+0 DOI: 10.1128/MCB.21.4.1228-1238.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
hnRNP F Influences Binding of a 64-Kilodalton
Subunit of Cleavage Stimulation Factor to mRNA Precursors in Mouse
B Cells
Kristen L.
Veraldi,1
George K.
Arhin,2
Kathleen
Martincic,1
Ling-Hsiu
Chung-Ganster,1
Jeffrey
Wilusz,2 and
Christine
Milcarek1,*
Department of Molecular Genetics and
Biochemistry, University of Pittsburgh School of Medicine, Pittsburgh,
Pennsylvania 15261,1 and Department of
Microbiology and Molecular Genetics, UMDNJ-NJ Medical School,
Newark, New Jersey 071032
Received 31 May 2000/Returned for modification 7 July 2000/Accepted 16 November 2000
Previous studies on the regulation of polyadenylation of the
immunoglobulin (Ig) heavy-chain pre-mRNA argued for
trans-acting modifiers of the cleavage-polyadenylation
reaction operating differentially during B-cell developmental stages.
Using four complementary approaches, we demonstrate that a change in
the level of hnRNP F is an important determinant in the regulated use
of alternative polyadenylation sites between memory and plasma stage B
cells. First, by Western analyses of cellular proteins, the ratio of
hnRNP F to H or H' was found to be higher in memory B cells than in
plasma cells. In memory B cells the activity of CstF-64 binding to
pre-mRNA, but not its amount, was reduced. Second, examination of the
complexes formed on input pre-mRNA in nuclear extracts revealed large
assemblages containing hnRNP H, H', and F but deficient in CstF-64 in
memory B-cell extracts but not in plasma cells. Formation of these
large complexes is dependent on the region downstream of the
AAUAAA in pre-mRNA, suggesting that CstF-64 and the hnRNPs
compete for a similar region. Third, using a recombinant protein we
showed that hnRNP F could bind to the region downstream of a poly(A) site, block CstF-64 association with RNA, and inhibit the cleavage reaction. Fourth, overexpression of recombinant hnRNP F in plasma cells
resulted in a decrease in the endogenous Ig heavy-chain mRNA secretory
form-to-membrane ratio. These results demonstrate that mammalian hnRNP
F can act as a negative regulator in the pre-mRNA cleavage reaction and
that increased expression of F in memory B cells contributes to the
suppression of the Ig heavy-chain secretory poly(A) site.
*
Corresponding author. Mailing address: Department of
Molecular Genetics and Biochemistry and Graduate Program in Immunology, University of Pittsburgh School of Medicine, W1257 Biomedical Science
Tower, Pittsburgh, PA 15261. Phone: (412) 648-9098. Fax: (412)
624-1401. E-mail: milcarek{at}pitt.edu.
Molecular and Cellular Biology, February 2001, p. 1228-1238, Vol. 21, No. 4
0270-7306/01/$04.00+0 DOI: 10.1128/MCB.21.4.1228-1238.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
This article has been cited by other articles:
-
Millevoi, S., Decorsiere, A., Loulergue, C., Iacovoni, J., Bernat, S., Antoniou, M., Vagner, S.
(2009). A physical and functional link between splicing factors promotes pre-mRNA 3' end processing. Nucleic Acids Res
37: 4672-4683
[Abstract]
[Full Text]
-
Wang, E., Cambi, F.
(2009). Heterogeneous Nuclear Ribonucleoproteins H and F Regulate the Proteolipid Protein/DM20 Ratio by Recruiting U1 Small Nuclear Ribonucleoprotein through a Complex Array of G Runs. J. Biol. Chem.
284: 11194-11204
[Abstract]
[Full Text]
-
Sandberg, R., Neilson, J. R., Sarma, A., Sharp, P. A., Burge, C. B.
(2008). Proliferating Cells Express mRNAs with Shortened 3' Untranslated Regions and Fewer MicroRNA Target Sites. Science
320: 1643-1647
[Abstract]
[Full Text]
-
Kikin, O., Zappala, Z., D'Antonio, L., Bagga, P. S.
(2008). GRSDB2 and GRS_UTRdb: databases of quadruplex forming G-rich sequences in pre-mRNAs and mRNAs. Nucleic Acids Res
36: D141-D148
[Abstract]
[Full Text]
-
Shell, S. A., Martincic, K., Tran, J., Milcarek, C.
(2007). Increased Phosphorylation of the Carboxyl-Terminal Domain of RNA Polymerase II and Loading of Polyadenylation and Cotranscriptional Factors Contribute to Regulation of the Ig Heavy Chain mRNA in Plasma Cells. J. Immunol.
179: 7663-7673
[Abstract]
[Full Text]
-
Bucheli, M. E., He, X., Kaplan, C. D., Moore, C. L., Buratowski, S.
(2007). Polyadenylation site choice in yeast is affected by competition between Npl3 and polyadenylation factor CFI. RNA
13: 1756-1764
[Abstract]
[Full Text]
-
Wang, E., Dimova, N., Cambi, F.
(2007). PLP/DM20 ratio is regulated by hnRNPH and F and a novel G-rich enhancer in oligodendrocytes. Nucleic Acids Res
0: gkm387v1-15
[Abstract]
[Full Text]
-
Schaub, M. C., Lopez, S. R., Caputi, M.
(2007). Members of the Heterogeneous Nuclear Ribonucleoprotein H Family Activate Splicing of an HIV-1 Splicing Substrate by Promoting Formation of ATP-dependent Spliceosomal Complexes. J. Biol. Chem.
282: 13617-13626
[Abstract]
[Full Text]
-
Dalziel, M., Nunes, N. M., Furger, A.
(2007). Two G-Rich Regulatory Elements Located Adjacent to and 440 Nucleotides Downstream of the Core Poly(A) Site of the Intronless Melanocortin Receptor 1 Gene Are Critical for Efficient 3' End Processing. Mol. Cell. Biol.
27: 1568-1580
[Abstract]
[Full Text]
-
Zhu, H., Zhou, H.-L., Hasman, R. A., Lou, H.
(2007). Hu Proteins Regulate Polyadenylation by Blocking Sites Containing U-rich Sequences. J. Biol. Chem.
282: 2203-2210
[Abstract]
[Full Text]
-
Liu, D., Brockman, J. M., Dass, B., Hutchins, L. N., Singh, P., McCarrey, J. R., MacDonald, C. C., Graber, J. H.
(2007). Systematic variation in mRNA 3'-processing signals during mouse spermatogenesis. Nucleic Acids Res
35: 234-246
[Abstract]
[Full Text]
-
Kubo, T., Wada, T., Yamaguchi, Y., Shimizu, A., Handa, H.
(2006). Knock-down of 25 kDa subunit of cleavage factor Im in Hela cells alters alternative polyadenylation within 3'-UTRs. Nucleic Acids Res
34: 6264-6271
[Abstract]
[Full Text]
-
Peterson, M. L., Bingham, G. L., Cowan, C.
(2006). Multiple features contribute to the use of the immunoglobulin m secretion-specific poly(a) signal but are not required for developmental regulation.. Mol. Cell. Biol.
26: 6762-6771
[Abstract]
[Full Text]
-
Wang, H., Sartini, B. L., Millette, C. F., Kilpatrick, D. L.
(2006). A Developmental Switch in Transcription Factor Isoforms During Spermatogenesis Controlled by Alternative Messenger RNA 3'-End Formation. Biol. Reprod.
75: 318-323
[Abstract]
[Full Text]
-
Kikin, O., D'Antonio, L., Bagga, P. S
(2006). QGRS Mapper: a web-based server for predicting G-quadruplexes in nucleotide sequences.. Nucleic Acids Res
34: W676-W682
[Abstract]
[Full Text]
-
Delaney, K. J., Xu, R., Zhang, J., Li, Q. Q., Yun, K.-Y., Falcone, D. L., Hunt, A. G.
(2006). Calmodulin Interacts with and Regulates the RNA-Binding Activity of an Arabidopsis Polyadenylation Factor Subunit. Plant Physiol.
140: 1507-1521
[Abstract]
[Full Text]
-
Balasubramani, M., Day, B. W., Schoen, R. E., Getzenberg, R. H.
(2006). Altered Expression and Localization of Creatine Kinase B, Heterogeneous Nuclear Ribonucleoprotein F, and High Mobility Group Box 1 Protein in the Nuclear Matrix Associated with Colon Cancer. Cancer Res.
66: 763-769
[Abstract]
[Full Text]
-
Kostadinov, R., Malhotra, N., Viotti, M., Shine, R., D'Antonio, L., Bagga, P.
(2006). GRSDB: a database of quadruplex forming G-rich sequences in alternatively processed mammalian pre-mRNA sequences. Nucleic Acids Res
34: D119-D124
[Abstract]
[Full Text]
-
Shell, S. A., Hesse, C., Morris, S. M. Jr., Milcarek, C.
(2005). Elevated Levels of the 64-kDa Cleavage Stimulatory Factor (CstF-64) in Lipopolysaccharide-stimulated Macrophages Influence Gene Expression and Induce Alternative Poly(A) Site Selection. J. Biol. Chem.
280: 39950-39961
[Abstract]
[Full Text]
-
Oberg, D., Fay, J., Lambkin, H., Schwartz, S.
(2005). A Downstream Polyadenylation Element in Human Papillomavirus Type 16 L2 Encodes Multiple GGG Motifs and Interacts with hnRNP H. J. Virol.
79: 9254-9269
[Abstract]
[Full Text]
-
Wei, C.-C., Guo, D.-F., Zhang, S.-L., Ingelfinger, J. R., Chan, J. S.D.
(2005). Heterogenous Nuclear Ribonucleoprotein F Modulates Angiotensinogen Gene Expression in Rat Kidney Proximal Tubular Cells. J. Am. Soc. Nephrol.
16: 616-628
[Abstract]
[Full Text]
-
Phillips, C., Pachikara, N., Gunderson, S. I.
(2004). U1A Inhibits Cleavage at the Immunoglobulin M Heavy-Chain Secretory Poly(A) Site by Binding between the Two Downstream GU-Rich Regions. Mol. Cell. Biol.
24: 6162-6171
[Abstract]
[Full Text]
-
Vassileva, M. T., Matunis, M. J.
(2004). SUMO Modification of Heterogeneous Nuclear Ribonucleoproteins. Mol. Cell. Biol.
24: 3623-3632
[Abstract]
[Full Text]
-
Soller, M., White, K.
(2003). ELAV inhibits 3'-end processing to promote neural splicing of ewg pre-mRNA. Genes Dev.
17: 2526-2538
[Abstract]
[Full Text]
-
BRUCE, S. R., DINGLE, R.W. C., PETERSON, M. L.
(2003). B-cell and plasma-cell splicing differences: A potential role in regulated immunoglobulin RNA processing. RNA
9: 1264-1273
[Abstract]
[Full Text]
-
Rooke, N., Markovtsov, V., Cagavi, E., Black, D. L.
(2003). Roles for SR Proteins and hnRNP A1 in the Regulation of c-src Exon N1. Mol. Cell. Biol.
23: 1874-1884
[Abstract]
[Full Text]
-
Zarudnaya, M. I., Kolomiets, I. M., Potyahaylo, A. L., Hovorun, D. M.
(2003). Downstream elements of mammalian pre-mRNA polyadenylation signals: primary, secondary and higher-order structures. Nucleic Acids Res
31: 1375-1386
[Abstract]
[Full Text]
-
Benoit, B., Juge, F., Iral, F., Audibert, A., Simonelig, M.
(2002). Chimeric human CstF-77/Drosophila Suppressor of forked proteins rescue suppressor of forked mutant lethality and mRNA 3' end processing in Drosophila. Proc. Natl. Acad. Sci. USA
99: 10593-10598
[Abstract]
[Full Text]
-
Peterson, M. L., Bertolino, S., Davis, F.
(2002). An RNA Polymerase Pause Site Is Associated with the Immunoglobulin {micro}s Poly(A) Site. Mol. Cell. Biol.
22: 5606-5615
[Abstract]
[Full Text]
-
Arhin, G. K., Boots, M., Bagga, P. S., Milcarek, C., Wilusz, J.
(2002). Downstream sequence elements with different affinities for the hnRNP H/H' protein influence the processing efficiency of mammalian polyadenylation signals. Nucleic Acids Res
30: 1842-1850
[Abstract]
[Full Text]
-
Fogel, B. L., McNally, L. M., McNally, M. T.
(2002). Efficient polyadenylation of Rous sarcoma virus RNA requires the negative regulator of splicing element. Nucleic Acids Res
30: 810-817
[Abstract]
[Full Text]
-
Ahuja, D., Karow, D. S., Kilpatrick, J. E., Imperiale, M. J.
(2001). RNA Polymerase II-dependent Positional Effects on mRNA 3' End Processing in the Adenovirus Major Late Transcription Unit. J. Biol. Chem.
276: 41825-41831
[Abstract]
[Full Text]