This Article
Right arrow Full Text
Right arrow Full Text (PDF)
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrowReprints and Permissions
Right arrow Copyright Information
Right arrow Books from ASM Press
Right arrow MicrobeWorld
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Haracska, L.
Right arrow Articles by Prakash, S.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Haracska, L.
Right arrow Articles by Prakash, S.

 Previous Article  |  Next Article 

Molecular and Cellular Biology, February 2002, p. 784-791, Vol. 22, No. 3
0270-7306/01/$04.00+0     DOI: 10.1128/MCB.22.3.784-791.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.

Stimulation of DNA Synthesis Activity of Human DNA Polymerase {kappa} by PCNA

Lajos Haracska, Ildiko Unk, Robert E. Johnson, Barbara B. Phillips, Jerard Hurwitz, Louise Prakash, and Satya Prakash*

Sealy Center for Molecular Science, University of Texas Medical Branch, Galveston, Texas 77555-1061

Received 20 September 2001/ Returned for modification 19 October 2001/ Accepted 23 October 2001

Humans have three DNA polymerases, Pol{eta}, Pol{kappa}, and Pol{iota}, which are able to promote replication through DNA lesions. However, the mechanism by which these DNA polymerases are targeted to the replication machinery stalled at a lesion site has remained unknown. Here, we provide evidence for the physical interaction of human Pol{kappa} (hPol{kappa}) with proliferating cell nuclear antigen (PCNA) and show that PCNA, replication factor C (RFC), and replication protein A (RPA) act cooperatively to stimulate the DNA synthesis activity of hPol{kappa}. The processivity of hPol{kappa}, however, is not significantly increased in the presence of these protein factors. The efficiency (Vmax/Km) of correct nucleotide incorporation by hPol{kappa} is enhanced ~50- to 200-fold in the presence of PCNA, RFC, and RPA, and this increase in efficiency is achieved by a reduction in the apparent Km for the nucleotide. Although in the presence of these protein factors, the efficiency of the insertion of an A nucleotide opposite an abasic site is increased ~40-fold, this reaction still remains quite inefficient; thus, it is unlikely that hPol{kappa} would bypass an abasic site by inserting a nucleotide opposite the site.


* Corresponding author. Mailing address: Sealy Center for Molecular Science, University of Texas Medical Branch, 6.104 Blocker Medical Research Building, 11th and Mechanic St., Galveston, TX 77555-1061. Phone: (409) 747-8602. Fax: (409) 747-8608. E-mail: sprakash{at}scms.utmb.edu.


Molecular and Cellular Biology, February 2002, p. 784-791, Vol. 22, No. 3
0022-538X/01/$04.00+0     DOI: 10.1128/MCB.22.3.784-791.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.




This article has been cited by other articles:

  • Burkovics, P., Hajdu, I., Szukacsov, V., Unk, I., Haracska, L. (2009). Role of PCNA-dependent stimulation of 3'-phosphodiesterase and 3'-5' exonuclease activities of human Ape2 in repair of oxidative DNA damage. Nucleic Acids Res 37: 4247-4255 [Abstract] [Full Text]  
  • Acharya, N., Johnson, R. E., Pages, V., Prakash, L., Prakash, S. (2009). Yeast Rev1 protein promotes complex formation of DNA polymerase {zeta} with Pol32 subunit of DNA polymerase {delta}. Proc. Natl. Acad. Sci. USA 106: 9631-9636 [Abstract] [Full Text]  
  • Scouten Ponticelli, S. K., Duzen, J. M., Sutton, M. D. (2009). Contributions of the individual hydrophobic clefts of the Escherichia coli {beta} sliding clamp to clamp loading, DNA replication and clamp recycling. Nucleic Acids Res 37: 2796-2809 [Abstract] [Full Text]  
  • Hishiki, A., Hashimoto, H., Hanafusa, T., Kamei, K., Ohashi, E., Shimizu, T., Ohmori, H., Sato, M. (2009). Structural Basis for Novel Interactions between Human Translesion Synthesis Polymerases and Proliferating Cell Nuclear Antigen. J. Biol. Chem. 284: 10552-10560 [Abstract] [Full Text]  
  • Waters, L. S., Minesinger, B. K., Wiltrout, M. E., D'Souza, S., Woodruff, R. V., Walker, G. C. (2009). Eukaryotic Translesion Polymerases and Their Roles and Regulation in DNA Damage Tolerance. Microbiol. Mol. Biol. Rev. 73: 134-154 [Abstract] [Full Text]  
  • Acharya, N., Yoon, J.-H., Gali, H., Unk, I., Haracska, L., Johnson, R. E., Hurwitz, J., Prakash, L., Prakash, S. (2008). Roles of PCNA-binding and ubiquitin-binding domains in human DNA polymerase {eta} in translesion DNA synthesis. Proc. Natl. Acad. Sci. USA 105: 17724-17729 [Abstract] [Full Text]  
  • Acharya, N., Brahma, A., Haracska, L., Prakash, L., Prakash, S. (2007). Mutations in the Ubiquitin Binding UBZ Motif of DNA Polymerase {eta} Do Not Impair Its Function in Translesion Synthesis during Replication. Mol. Cell. Biol. 27: 7266-7272 [Abstract] [Full Text]  
  • Bish, R. A., Myers, M. P. (2007). Werner Helicase-interacting Protein 1 Binds Polyubiquitin via Its Zinc Finger Domain. J. Biol. Chem. 282: 23184-23193 [Abstract] [Full Text]  
  • Kamath-Loeb, A. S., Lan, L., Nakajima, S., Yasui, A., Loeb, L. A. (2007). Werner syndrome protein interacts functionally with translesion DNA polymerases. Proc. Natl. Acad. Sci. USA 104: 10394-10399 [Abstract] [Full Text]  
  • Unk, I., Hajdu, I., Fatyol, K., Szakal, B., Blastyak, A., Bermudez, V., Hurwitz, J., Prakash, L., Prakash, S., Haracska, L. (2006). Human SHPRH is a ubiquitin ligase for Mms2-Ubc13-dependent polyubiquitylation of proliferating cell nuclear antigen. Proc. Natl. Acad. Sci. USA 103: 18107-18112 [Abstract] [Full Text]  
  • Gangavarapu, V., Haracska, L., Unk, I., Johnson, R. E., Prakash, S., Prakash, L. (2006). Mms2-Ubc13-Dependent and -Independent Roles of Rad5 Ubiquitin Ligase in Postreplication Repair and Translesion DNA Synthesis in Saccharomyces cerevisiae. Mol. Cell. Biol. 26: 7783-7790 [Abstract] [Full Text]  
  • Choi, J.-Y., Angel, K. C., Guengerich, F. P. (2006). Translesion Synthesis across Bulky N2-Alkyl Guanine DNA Adducts by Human DNA Polymerase {kappa}. J. Biol. Chem. 281: 21062-21072 [Abstract] [Full Text]  
  • Andreassen, P. R., Ho, G. P.H., D'Andrea, A. D. (2006). DNA damage responses and their many interactions with the replication fork. Carcinogenesis 27: 883-892 [Abstract] [Full Text]  
  • Haracska, L., Unk, I., Prakash, L., Prakash, S. (2006). Ubiquitylation of yeast proliferating cell nuclear antigen and its implications for translesion DNA synthesis. Proc. Natl. Acad. Sci. USA 103: 6477-6482 [Abstract] [Full Text]  
  • Maga, G., Shevelev, I., Villani, G., Spadari, S., Hubscher, U. (2006). Human replication protein A can suppress the intrinsic in vitro mutator phenotype of human DNA polymerase {lambda}. Nucleic Acids Res 34: 1405-1415 [Abstract] [Full Text]  
  • Wolfle, W. T., Johnson, R. E., Minko, I. G., Lloyd, R. S., Prakash, S., Prakash, L. (2006). Replication past a trans-4-Hydroxynonenal Minor-Groove Adduct by the Sequential Action of Human DNA Polymerases {iota} and {kappa}. Mol. Cell. Biol. 26: 381-386 [Abstract] [Full Text]  
  • Garg, P., Burgers, P. M. (2005). Ubiquitinated proliferating cell nuclear antigen activates translesion DNA polymerases {eta} and REV1. Proc. Natl. Acad. Sci. USA 102: 18361-18366 [Abstract] [Full Text]  
  • Haracska, L., Johnson, R. E., Prakash, L., Prakash, S. (2005). Trf4 and Trf5 Proteins of Saccharomyces cerevisiae Exhibit Poly(A) RNA Polymerase Activity but No DNA Polymerase Activity. Mol. Cell. Biol. 25: 10183-10189 [Abstract] [Full Text]  
  • Acharya, N., Haracska, L., Johnson, R. E., Unk, I., Prakash, S., Prakash, L. (2005). Complex Formation of Yeast Rev1 and Rev7 Proteins: a Novel Role for the Polymerase-Associated Domain. Mol. Cell. Biol. 25: 9734-9740 [Abstract] [Full Text]  
  • Wolfle, W. T., Johnson, R. E., Minko, I. G., Lloyd, R. S., Prakash, S., Prakash, L. (2005). Human DNA Polymerase {iota} Promotes Replication through a Ring-Closed Minor-Groove Adduct That Adopts a syn Conformation in DNA. Mol. Cell. Biol. 25: 8748-8754 [Abstract] [Full Text]  
  • Masuda, K., Ouchida, R., Takeuchi, A., Saito, T., Koseki, H., Kawamura, K., Tagawa, M., Tokuhisa, T., Azuma, T., O-Wang, J. (2005). DNA polymerase {theta} contributes to the generation of C/G mutations during somatic hypermutation of Ig genes. Proc. Natl. Acad. Sci. USA 102: 13986-13991 [Abstract] [Full Text]  
  • Wolfle, W. T., Washington, M. T., Kool, E. T., Spratt, T. E., Helquist, S. A., Prakash, L., Prakash, S. (2005). Evidence for a Watson-Crick Hydrogen Bonding Requirement in DNA Synthesis by Human DNA Polymerase {kappa}. Mol. Cell. Biol. 25: 7137-7143 [Abstract] [Full Text]  
  • Johnson, R. E., Prakash, L., Prakash, S. (2005). Biochemical evidence for the requirement of Hoogsteen base pairing for replication by human DNA polymerase {iota}. Proc. Natl. Acad. Sci. USA 102: 10466-10471 [Abstract] [Full Text]  
  • Shimazaki, N., Yazaki, T., Kubota, T., Sato, A., Nakamura, A., Kurei, S., Toji, S., Tamai, K., Koiwai, O. (2005). DNA polymerase lambda directly binds to proliferating cell nuclear antigen through its confined C-terminal region. GENES CELLS 10: 705-715 [Abstract] [Full Text]  
  • Garg, P., Stith, C. M., Majka, J., Burgers, P. M. J. (2005). Proliferating Cell Nuclear Antigen Promotes Translesion Synthesis by DNA Polymerase {zeta}. J. Biol. Chem. 280: 23446-23450 [Abstract] [Full Text]  
  • Bi, X., Slater, D. M., Ohmori, H., Vaziri, C. (2005). DNA Polymerase {kappa} Is Specifically Required for Recovery from the Benzo[a]pyrene-Dihydrodiol Epoxide (BPDE)-induced S-phase Checkpoint. J. Biol. Chem. 280: 22343-22355 [Abstract] [Full Text]  
  • Mukhopadhyay, U. K., Senderowicz, A. M., Ferbeyre, G. (2005). RNA Silencing of Checkpoint Regulators Sensitizes p53-Defective Prostate Cancer Cells to Chemotherapy while Sparing Normal Cells. Cancer Res. 65: 2872-2881 [Abstract] [Full Text]  
  • Haracska, L., Acharya, N., Unk, I., Johnson, R. E., Hurwitz, J., Prakash, L., Prakash, S. (2005). A Single Domain in Human DNA Polymerase {iota} Mediates Interaction with PCNA: Implications for Translesion DNA Synthesis. Mol. Cell. Biol. 25: 1183-1190 [Abstract] [Full Text]  
  • Bavoux, C., Leopoldino, A. M., Bergoglio, V., O-Wang, J., Ogi, T., Bieth, A., Judde, J.-G., Pena, S. D. J., Poupon, M.-F., Helleday, T., Tagawa, M., Machado, C., Hoffmann, J.-S., Cazaux, C. (2005). Up-Regulation of the Error-Prone DNA Polymerase {kappa} Promotes Pleiotropic Genetic Alterations and Tumorigenesis. Cancer Res. 65: 325-330 [Abstract] [Full Text]  
  • Ogi, T., Kannouche, P., Lehmann, A. R. (2005). Localisation of human Y-family DNA polymerase {kappa}: relationship to PCNA foci. J. Cell Sci. 118: 129-136 [Abstract] [Full Text]  
  • Kusumoto, R., Masutani, C., Shimmyo, S., Iwai, S., Hanaoka, F. (2004). DNA binding properties of human DNA polymerase {eta}: implications for fidelity and polymerase switching of translesion synthesis. GENES CELLS 9: 1139-1150 [Abstract] [Full Text]  
  • Vidal, A. E., Kannouche, P., Podust, V. N., Yang, W., Lehmann, A. R., Woodgate, R. (2004). Proliferating Cell Nuclear Antigen-dependent Coordination of the Biological Functions of Human DNA Polymerase {iota}. J. Biol. Chem. 279: 48360-48368 [Abstract] [Full Text]  
  • Chaudhry, H. W., Dashoush, N. H., Tang, H., Zhang, L., Wang, X., Wu, E. X., Wolgemuth, D. J. (2004). Cyclin A2 Mediates Cardiomyocyte Mitosis in the Postmitotic Myocardium. J. Biol. Chem. 279: 35858-35866 [Abstract] [Full Text]  
  • Washington, M. T., Minko, I. G., Johnson, R. E., Wolfle, W. T., Harris, T. M., Lloyd, R. S., Prakash, S., Prakash, L. (2004). Efficient and Error-Free Replication Past a Minor-Groove DNA Adduct by the Sequential Action of Human DNA Polymerases {iota} and {kappa}. Mol. Cell. Biol. 24: 5687-5693 [Abstract] [Full Text]  
  • Ohashi, E., Murakumo, Y., Kanjo, N., Akagi, J.-i., Masutani, C., Hanaoka, F., Ohmori, H. (2004). Interaction of hREV1 with three human Y-family DNA polymerases. GENES CELLS 9: 523-531 [Abstract] [Full Text]  
  • Haracska, L., Torres-Ramos, C. A., Johnson, R. E., Prakash, S., Prakash, L. (2004). Opposing Effects of Ubiquitin Conjugation and SUMO Modification of PCNA on Replicational Bypass of DNA Lesions in Saccharomyces cerevisiae. Mol. Cell. Biol. 24: 4267-4274 [Abstract] [Full Text]  
  • Haracska, L., Prakash, L., Prakash, S. (2003). A mechanism for the exclusion of low-fidelity human Y-family DNA polymerases from base excision repair. Genes Dev. 17: 2777-2785 [Abstract] [Full Text]  
  • Wolfle, W. T., Washington, M. T., Prakash, L., Prakash, S. (2003). Human DNA polymerase {kappa} uses template-primer misalignment as a novel means for extending mispaired termini and for generating single-base deletions. Genes Dev. 17: 2191-2199 [Abstract] [Full Text]  
  • Maga, G., Hubscher, U. (2003). Proliferating cell nuclear antigen (PCNA): a dancer with many partners. J. Cell Sci. 116: 3051-3060 [Abstract] [Full Text]  
  • Shcherbakova, P. V., Bebenek, K., Kunkel, T. A. (2003). Functions of Eukaryotic DNA Polymerases. Sci Aging Knowl Environ 2003: re3-3 [Abstract] [Full Text]  
  • Kai, M., Wang, T. S.-F. (2003). Checkpoint activation regulates mutagenic translesion synthesis. Genes Dev. 17: 64-76 [Abstract] [Full Text]  
  • Maga, G., Villani, G., Ramadan, K., Shevelev, I., Le Gac, N. T., Blanco, L., Blanca, G., Spadari, S., Hubscher, U. (2002). Human DNA Polymerase lambda Functionally and Physically Interacts with Proliferating Cell Nuclear Antigen in Normal and Translesion DNA Synthesis. J. Biol. Chem. 277: 48434-48440 [Abstract] [Full Text]  
  • Fischhaber, P. L., Gerlach, V. L., Feaver, W. J., Hatahet, Z., Wallace, S. S., Friedberg, E. C. (2002). Human DNA Polymerase kappa Bypasses and Extends beyond Thymine Glycols during Translesion Synthesis in Vitro, Preferentially Incorporating Correct Nucleotides. J. Biol. Chem. 277: 37604-37611 [Abstract] [Full Text]  
  • Bermudez, V. P., MacNeill, S. A., Tappin, I., Hurwitz, J. (2002). The Influence of the Cdc27 Subunit on the Properties of the Schizosaccharomyces pombe DNA Polymerase delta. J. Biol. Chem. 277: 36853-36862 [Abstract] [Full Text]  
  • Unk, I., Haracska, L., Gomes, X. V., Burgers, P. M. J., Prakash, L., Prakash, S. (2002). Stimulation of 3'->5' Exonuclease and 3'-Phosphodiesterase Activities of Yeast Apn2 by Proliferating Cell Nuclear Antigen. Mol. Cell. Biol. 22: 6480-6486 [Abstract] [Full Text]  
  • Prakash, S., Prakash, L. (2002). Translesion DNA synthesis in eukaryotes: A one- or two-polymerase affair. Genes Dev. 16: 1872-1883 [Full Text]  
  • Bergoglio, V., Bavoux, C., Verbiest, V., Hoffmann, J.-S., Cazaux, C. (2002). Localisation of human DNA polymerase {kappa} to replication foci. J. Cell Sci. 115: 4413-4418 [Abstract] [Full Text]