Next Article 
Molecular and Cellular Biology, August 2003, p. 5475-5488, Vol. 23, No. 16
0270-7306/03/$08.00+0 DOI: 10.1128/MCB.23.16.5475-5488.2003
Copyright © 2003, American Society for Microbiology. All Rights Reserved.
Epigenetic Properties and Identification of an Imprint Mark in the Nesp-Gnasxl Domain of the Mouse Gnas Imprinted Locus
Candice Coombes,1,
Philippe Arnaud,1 Emma Gordon,1 Wendy Dean,1 Elizabeth A. Coar,1 Christine M. Williamson,2 Robert Feil,3 Jo Peters,2 and Gavin Kelsey1*
Developmental Genetics Programme, The Babraham Institute, Cambridge CB2 4AT,1
MRC Mammalian Genetics Unit, Harwell, Didcot, Oxfordshire OX11 0RD, United Kingdom,2
Institute of Molecular Genetics, CNRS, UMR-5535, 34293 Montpellier, France3
Received 20 December 2002/
Returned for modification 7 April 2003/
Accepted 20 May 2003
The Gnas locus in the mouse is imprinted with a complex arrangement of alternative transcripts defined by promoters with different patterns of monoallelic expression. The Gnas transcript is subject to tissue-specific imprinted expression, Nesp is expressed only from the maternal allele, and Gnasxl is expressed only from the paternal allele. The mechanisms controlling these expression patterns are not known. To identify potential imprinting regulatory regions, particularly for the reciprocally expressed Nesp and Gnasxl promoters, we examined epigenetic properties of the locus in gametes, embryonic stem cells, and fetal and adult tissues. The Nesp and Gnasxl promoter regions are contained in extensive CpG islands with methylation of the paternal allele at Nesp and the maternal allele at Gnasxl. Parental allele-specific DNase I-hypersensitive sites were found at these regions, which correlate with hypomethylation rather than actual expression status. A germ line methylation mark was identified covering the promoters for Gnasxl and the antisense transcript Nespas. Prominent DNase I-hypersensitive sites present on paternal alleles in embryonic stem cells are contained within this mark. This is the second gametic mark identified at Gnas and suggests that the Nesp and Gnasxl promoters are under separate control from the Gnas promoter. We propose models to account for the regulation of imprinting at the locus.
* Corresponding author. Mailing address: Developmental Genetics Programme, The Babraham Institute, Cambridge CB2 4AT, United Kingdom. Phone: 44-1223 496332. Fax: 44-1223 496022. E-mail:
gavin.kelsey{at}bbsrc.ac.uk.
Present address: Johns Hopkins University, Baltimore, MD 21231.
Molecular and Cellular Biology, August 2003, p. 5475-5488, Vol. 23, No. 16
0022-538X/03/$08.00+0 DOI: 10.1128/MCB.23.16.5475-5488.2003
Copyright © 2003, American Society for Microbiology. All Rights Reserved.
This article has been cited by other articles:
-
Chotalia, M., Smallwood, S. A., Ruf, N., Dawson, C., Lucifero, D., Frontera, M., James, K., Dean, W., Kelsey, G.
(2009). Transcription is required for establishment of germline methylation marks at imprinted genes. Genes Dev.
23: 105-117
[Abstract]
[Full Text]
-
Wadhawan, S., Dickins, B., Nekrutenko, A.
(2008). Wheels within Wheels: Clues to the Evolution of the Gnas and Gnal Loci. Mol Biol Evol
25: 2745-2757
[Abstract]
[Full Text]
-
Krechowec, S., Plagge, A.
(2008). Physiological Dysfunctions Associated with Mutations of the Imprinted Gnas Locus. Physiology
23: 221-229
[Abstract]
[Full Text]
-
Plagge, A., Kelsey, G., Germain-Lee, E. L
(2008). Physiological functions of the imprinted Gnas locus and its protein variants G{alpha}s and XL{alpha}s in human and mouse. J Endocrinol
196: 193-214
[Abstract]
[Full Text]
-
Ruf, N., Bahring, S., Galetzka, D., Pliushch, G., Luft, F. C., Nurnberg, P., Haaf, T., Kelsey, G., Zechner, U.
(2007). Sequence-based bioinformatic prediction and QUASEP identify genomic imprinting of the KCNK9 potassium channel gene in mouse and human. Hum Mol Genet
16: 2591-2599
[Abstract]
[Full Text]
-
Do Kim, J., Hinz, A. K., Bergmann, A., Huang, J. M., Ovcharenko, I., Stubbs, L., Kim, J.
(2006). Identification of clustered YY1 binding sites in imprinting control regions. Genome Res
16: 901-911
[Abstract]
[Full Text]
-
Van den Veyver, I.B., Al-Hussaini, T.K.
(2006). Biparental hydatidiform moles: a maternal effect mutation affecting imprinting in the offspring. Hum Reprod Update
12: 233-242
[Abstract]
[Full Text]
-
Tufarelli, C.
(2006). The silence RNA keeps: cis mechanisms of RNA mediated epigenetic silencing in mammals. Phil Trans R Soc B
361: 67-79
[Abstract]
[Full Text]
-
Pauler, F. M., Stricker, S. H., Warczok, K. E., Barlow, D. P.
(2005). Long-range DNase I hypersensitivity mapping reveals the imprinted Igf2r and Air promoters share cis-regulatory elements. Genome Res
15: 1379-1387
[Abstract]
[Full Text]
-
O'Neill, M. J.
(2005). The influence of non-coding RNAs on allele-specific gene expression in mammals. Hum Mol Genet
14: R113-R120
[Abstract]
[Full Text]
-
Liu, J., Chen, M., Deng, C., Bourc'his, D., Nealon, J. G., Erlichman, B., Bestor, T. H., Weinstein, L. S.
(2005). From the Cover: Identification of the control region for tissue-specific imprinting of the stimulatory G protein {alpha}-subunit. Proc. Natl. Acad. Sci. USA
102: 5513-5518
[Abstract]
[Full Text]
-
Liu, J., Nealon, J. G., Weinstein, L. S.
(2005). Distinct patterns of abnormal GNAS imprinting in familial and sporadic pseudohypoparathyroidism type IB. Hum Mol Genet
14: 95-102
[Abstract]
[Full Text]
-
Weinstein, L. S., Liu, J., Sakamoto, A., Xie, T., Chen, M.
(2004). Minireview: GNAS: Normal and Abnormal Functions. Endocrinology
145: 5459-5464
[Abstract]
[Full Text]
-
Sakamoto, A., Liu, J., Greene, A., Chen, M., Weinstein, L. S.
(2004). Tissue-specific imprinting of the G protein Gs{alpha} is associated with tissue-specific differences in histone methylation. Hum Mol Genet
13: 819-828
[Abstract]
[Full Text]
-
Li, T., Vu, T. H., Ulaner, G. A., Yang, Y., Hu, J.-F., Hoffman, A. R.
(2004). Activating and silencing histone modifications form independent allelic switch regions in the imprinted Gnas gene. Hum Mol Genet
13: 741-750
[Abstract]
[Full Text]