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Molecular and Cellular Biology, August 2005, p. 7333-7343, Vol. 25, No. 16
0270-7306/05/$08.00+0     doi:10.1128/MCB.25.16.7333-7343.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.

Defining the Domains of Human Polynucleotide Phosphorylase (hPNPaseOLD-35) Mediating Cellular Senescence

Devanand Sarkar,1 Eun Sook Park,1 Luni Emdad,1 Aaron Randolph,2 Kristoffer Valerie,2 and Paul B. Fisher1,3,4*

Departments of Pathology,1 Neurosurgery,3 Urology, Herbert Irving Comprehensive Cancer Center, Columbia University, College of Physicians and Surgeons, New York, New York 10032,4 Department of Radiation Oncology, Medical College of Virginia, Virginia Commonwealth University, Richmond, Virginia 232982

Received 3 December 2004/ Returned for modification 24 February 2005/ Accepted 24 May 2005

To fully comprehend cellular senescence, identification of relevant genes involved in this process is mandatory. Human polynucleotide phosphorylase (hPNPaseOLD-35), an evolutionarily conserved 3', 5' exoribonuclease mediating mRNA degradation, was first identified as a predominantly mitochondrial protein overexpressed during terminal differentiation and senescence. Overexpression of hPNPaseOLD-35 in human melanoma cells and melanocytes induces distinctive changes associated with senescence, potentially mediated by direct degradation of c-myc mRNA by this enzyme. hPNPaseOLD-35 contains two RNase PH (RPH) domains, one PNPase domain, and two RNA binding domains. Using deletion mutation analysis in combination with biochemical and molecular analyses we now demonstrate that the presence of either one of the two RPH domains conferred similar functional activity as the full-length protein, whereas a deletion mutant containing only the RNA binding domains was devoid of activity. Moreover, either one of the two RPH domains induced the morphological, biochemical, and gene expression changes associated with senescence, including degradation of c-myc mRNA. Subcellular distribution confirmed hPNPaseOLD-35 to be localized both in mitochondria and the cytoplasm. The present study elucidates how a predominantly mitochondrial protein, via its localization in both mitochondria and cytoplasm, is able to target a specific cytoplasmic mRNA, c-myc, for degradation and through this process induce cellular senescence.

* Corresponding author. Mailing address: Department of Pathology, College of Physicians & Surgeons, Columbia University, 630 W. 168th St., P&S Box 23, BB-1501, New York, NY 10032. Phone: (212) 305-3642. Fax: (212) 305-8177. E-mail: pbf1{at}columbia.edu.

Molecular and Cellular Biology, August 2005, p. 7333-7343, Vol. 25, No. 16
0022-538X/05/$08.00+0     doi:10.1128/MCB.25.16.7333-7343.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.



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