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Mol Cell Biol, June 1998, p. 3350-3356, Vol. 18, No. 6
Embryology Unit, Children's Medical Research
Institute, Westmead, New South Wales 2145, Australia
Received 23 December 1997/Returned for modification 16 February
1998/Accepted 20 March 1998
Most DNA in human sperm is bound to highly basic proteins called
protamines, but a small proportion is complexed with histones similar
to those found in active chromatin. This raises the intriguing possibility that histones in sperm are marking sets of genes that will
be preferentially activated during early development. We have examined
the chromatin structure of members of the Complex rearrangements of the sperm
chromatin occur during mammalian spermatogenesis. In the elongating
spermatids, the histones associated with the DNA are displaced by
transition proteins, which in turn are replaced by protamines. As a
result of this process, the chromatin in the spermatozoa is highly
condensed (17). In human sperm, approximately 15% of the
DNA remains associated with histones in a sequence-specific manner
(12, 25). The histones in sperm chromatin are a subset of
the histones found in somatic chromatin (13), and they form
nucleosomes which are more closely packed than those found in somatic
cells (4). Histone H1 is absent, histone H2 takes the form
of two minor variants, called H2A.X and H2A.Z, and the histones H3 and
H4 are extensively acetylated (13). Absence of histone H1
and acetylation of histones are both features of active chromatin
(28, 29). This has led to the suggestion that histones in
sperm could influence which genes are first transcribed after
fertilization (12).
To explore the impact of sperm chromatin on temporal gene regulation,
we analyzed the Our study employed a technique which selectively removes histones from
the sperm chromatin and then assesses the accessibility of specific
sites to restriction enzymes. We identified regions which have
conserved patterns of histone or protamine association in sperm samples
from the same person and between two individuals. We have related the
presence of these regions to expression patterns during development.
The detection of histone-associated regions in the Fractionation of sperm chromatin.
Liquefied semen samples
from two donors were collected and stored at
0270-7306/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
Histone- and Protamine-DNA Association:
Conservation of Different Patterns within the
-Globin Domain
in Human Sperm
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ABSTRACT
Top
Abstract
Introduction
Materials & Methods
Results
Discussion
References
-globin gene family, which
are expressed at different times in development, and the protamine 2 gene, which is expressed in spermatids prior to the widespread
displacement of histones by transition proteins. The genes coding for
and
globin, which are active in the embryonic yolk sac, contain
regions which are histone associated in the sperm. No
histone-associated regions are present at the sites tested within the
- and
-globin genes which are silent in the embryonic yolk sac.
The trends of histone or protamine association are consistent for
samples from the same person, and no significant between-subject
variations in these trends are found for 13 of the 15 fragments
analyzed in the two donors. The results suggest that sperm chromatin
structures are generally similar in different men but that the length
of the histone-associated regions can vary. The association of sperm
DNA with histones or protamines sometimes changes within as little as
400 bp of DNA, suggesting that there is fine control over the retention
of histones.
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INTRODUCTION
Top
Abstract
Introduction
Materials & Methods
Results
Discussion
References
-globin family of genes which are transcribed at
different times during development. The
-globin locus from 5' to 3'
consists of the locus control region (LCR) and the
-, G
-, A
-,
-, and
-globin genes. Only
the
- and
-globin genes are transcribed in the primitive
erythroblasts in the embryonic yolk sac which differentiates at 3 weeks
of gestation. The expression of the
-globin gene predominates during
the fetal period when the site of erythropoiesis shifts to the
definitive erythroblasts in the fetal liver. The
-globin gene
product is a minor variant produced after birth in bone marrow. The
-globin gene is expressed to a small extent in the fetus but
predominates after birth in bone marrow (21, 23). In this
complex process of globin switching, it is currently not clear what
roles are played by chromatin structures (2, 10) and by
interactions between the genes and the LCR and transcription factors
(5). The protamine 2 gene was studied as an example of a
gene which is transcribed at the stage when histones are being
displaced from spermatids but thereafter remains silent in the embryo
(19).
- and
-globin
genes suggests that the presence of histones may mark these genes for
early expression in the embryo.
![]()
MATERIALS AND METHODS
Top
Abstract
Introduction
Materials & Methods
Results
Discussion
References
20°C until analysis.
Collection and utilization of the sperm for the present study was
approved by the Central Sydney Area Health Service Ethics Review
Committee. Sperm DNA was separated into fractions enriched for
histone-associated DNA (HDNA) and protamine-associated DNA (PDNA) by a
modification of the method of Gatewood et al. (12).
Disulfide bonds between protamine molecules were reduced by
dithiothreitol, and the tails of the sperm were disrupted by
cetyltrimethylammonium bromide (3). All subsequent steps
were carried out very gently in the presence of 0.05% digitonin to
minimize clumping of nuclei. The nuclei were washed five times by
centrifugation at 3,000 × g for 5 min and suspension
in Tris saline buffer. Histones were selectively removed from the
chromatin by treatment with a solution containing 0.65 M NaCl, 1 mM
EDTA, and 10 mM Tris HCl, pH 8.0 (12). The nuclei were
washed once with a solution containing 100 mM NaCl, 5 mM
MgCl2, 1 mM
-mercaptoethanol, and 10 mM Tris HCl, pH
8.0. To release the HDNA fraction, the chromatin was cleaved with
BamHI and DraI restriction enzymes (Boehringer
Mannheim) in the above buffer for 1.5 h at 37°C with occasional
rocking. The nuclei from two to four ejaculates (about 5 × 108 cells) were incubated with 2,000 U of enzyme. The
chromatin was centrifuged at 3,000 × g for 2 min. The
resulting supernatant contained the HDNA fraction, and the pellet
contained the PDNA fraction. The supernatant was centrifuged twice at
9,000 × g to remove any contaminating PDNA.
Isolation of DNA. The HDNA fraction was incubated with 200 µg of proteinase K per ml and 0.5% sodium dodecyl sulfate (SDS) at 55°C overnight and extracted twice with phenol-chloroform (1:1 [vol/vol]). The HDNA was precipitated with ethanol and suspended in TE (10 mM Tris [pH 8.0], 0.1 mM EDTA). Protamines were removed from the pellet containing the PDNA fraction by a modified version of the method of Gatewood (13a). The pellet was solubilized in a solution containing 8 M urea, 0.6 M NaCl, 0.2 M dithiothreitol, and 10 mM Tris, pH 8.0, and passed through 18-, 21-, and 25-gauge needles, successively. The solubilized chromatin was then bound for 20 min at 4°C to an equal volume of preequilibrated SP Sephadex C-25 (Pharmacia Biotech). PDNA was purified from the unbound fraction by at least four extractions with phenol-chloroform followed by ethanol precipitation and suspension in TE. Total DNA from sperm was isolated by the same method as for the PDNA with the omission of the histone removal and restriction enzyme digestion steps.
Protein analysis. Following the 0.65 M NaCl treatment of the nuclei to selectively release histones, the supernatant containing the extracted proteins was collected. Acid-insoluble proteins were removed as described by Gatewood et al. (12), and the remaining proteins were desalted and concentrated by using Centricon 3 microconcentrators (Amicon). The proteins were then analyzed on gels prepared with 15% acrylamide-0.1% bisacrylamide-0.9 N acetic acid-2.5 M urea and visualized by Coomassie blue staining (24) (Fig. 1).
|
Southern blot analysis.
Genomic clones of the human genes
coding for protamine 2,
globin, and G
,
A
,
, and
globin were kindly provided by W. Engel,
M. Baron, and R. Trent, respectively. DNA probes incorporating
[
-32P]dCTP, illustrated in Fig. 2 to 5 and 7, were
generated by using a Gigaprime DNA labelling kit (Bresatec). DNA was
fractionated on 1.5% agarose superfine resolution gels (Amresco) and
transferred to Hybond N+ filters (Amersham) by the standard procedure
(20). Hybridization with DNA probes was performed in a
mixture of 5× SSC (1× SSC is 0.15 M NaCl plus 0.015 M sodium
citrate), 5× Denhardt's solution, 0.5% SDS, and 0.1 mg of herring
sperm DNA per ml overnight at 68°C. Blots were washed twice in 2×
SSC-0.1% SDS at 68°C and twice in 0.5× SSC-0.1% SDS at 68°C
for at least 30 min each time. Results were visualized and quantitated
with a PhosphorImager (Storm 860; Molecular Dynamics).
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RESULTS |
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Human sperm chromatin was separated into fractions enriched for either HDNA or PDNA at BamHI and DraI restriction enzyme sites. During fractionation, the HDNA and PDNA chromatin was fully or partially digested with restriction enzymes, respectively (see Materials and Methods). In order to obtain a quantitative comparison of DNA fragments in the two fractions, protein-extracted HDNA and PDNA (Fig. 2B to 7B, lanes 1 and 2) were redigested with BamHI and DraI restriction enzymes and termed HDNA or PDNA digest, respectively (Fig. 2B to 7B, lanes 3 and 5). Southern blots of equal amounts of DNA were then hybridized with DNA probes from genes of interest. The enrichment of a particular fragment in the HDNA digest lane compared to the TDNA and PDNA digest lanes indicates that, relative to the bulk of sperm DNA, the enzyme sites that were cleaved to generate the fragment were histone associated.
In order to standardize the results for different sperm preparations
and different Southern blots, all blots were hybridized to the
i
probe which detects the
-globin 1.7-kb (
2.12,
0.40) and
0.87-kb (
0.4,E2) fragments (see Fig. 3A). The
2.12,
0.40 fragment was consistently depleted in the HDNA fraction, whereas the
0.4,E2 fragment was 2.1 ± 0.15 times enriched in the HDNA digest lane compared to the TDNA and PDNA digest lanes (Fig. 2B to 5B
and 7B) and was the most histone associated of the fragments analyzed.
For each fragment analyzed, the relative intensity of hybridization
signal in the HDNA digest lane compared to that in PDNA digest lane was
calculated and this ratio was then divided by the equivalent ratio for
the
0.4,E2 control fragment on the same gel. The relative levels
of enrichment compared to the
0.4,E2 control fragment were
expressed on a scale from 0 to 1 (Fig. 2C to 5C and 7C).
globin.
For the gene coding for
globin, three
BamHI/DraI fragments were assayed by using probes
i to
iii (Fig. 2A). The 0.65-kb fragment released from the body of the gene (
E1,E2) was highly histone associated (Fig. 2B). The ratio of signal in HDNA compared to
the PDNA digest tracks was similar to those observed for the
0.4,E2 positive-control fragment (Fig. 2C). The 0.63-kb fragment surrounding the promoter region of the gene (
0.61,E1) showed either an even distribution between the PDNA and HDNA fractions or a
slight enrichment in the HDNA fraction (Fig. 2B). The level of
enrichment was on average only about 0.6 times that observed for the
E1,E2 fragment and the
0.4,E2 positive-control fragment (Fig.
2C). The 0.52-kb fragment derived from sites in the second exon and
second intron of the
-globin gene (
E2,IVS2) was depleted in the
HDNA fraction compared to the total DNA and PDNA fractions (Fig. 2B).
Therefore, the order of relative association with histones is
E1,E2 >
0.61,E1 >
E2,IVS2 for both donors (Fig.
2C). These results suggest that only the BamHI sites in E1
and E2 (Fig. 2A) are strongly histone associated.
|
globin.
For the gene coding for
globin, five DNA
fragments were examined by using probes
i to
iii (Fig.
3A); the smallest fragment, 0.32 kb, was
at the size limit of detection and was not visible on all Southern
blots. The 1.7-kb fragment, located entirely upstream of the gene (
2.12,
0.40), was very depleted in the HDNA fraction (Fig. 3B). The
0.87-kb fragment surrounding the promoter region (
0.40,E2), in
contrast, was highly enriched in the HDNA fraction (Fig. 3B). This is
the fragment used as a positive control on all Southern blots, as
discussed above. The 0.45-kb fragment derived from a site in the second
intron and another just downstream of the
-globin gene (
IVS2,ds)
was also highly histone associated (Fig. 3B). Results for the 0.38- and
0.32-kb fragments in the second intron (
IVS2,IVS2) were variable.
For donor 1, in three of four sperm samples, these fragments showed no
enrichment in the HDNA fraction (Fig. 3B). In the other preparation
from donor 1, however, the fragments were enriched in the HDNA fraction
to a level 75 to 80% that of the
0.4,E2 positive-control
fragment (not shown). In two samples from donor 2, the 0.38- and
0.32-kb fragments were also enriched to a level 75 to 80% that of the
0.4,E2 positive-control fragment (Fig. 3B and C). Despite the variability in the intron fragments, the human
-globin gene displays histone association in the order
0.40,E2 and
IVS2,ds >
IVS2,IVS2 >
2.12,
0.40 in both donors (Fig. 3C). The
results suggest first that the site at
2.12-kb (Fig. 3A) was
protamine associated in both donors. Second, in donor 1, the sites at
0.40, E2, IVS2 (3' half), and ds (Fig. 3A) were all histone
associated, whereas the extent of histone association of the
DraI site in the first half of IVS2 varied between sperm
samples. Third, in donor 2, all five sites in the vicinity of the gene
from
0.40 to ds were consistently histone associated, suggesting that
the whole gene is localized within a histone-associated region in sperm.
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globin.
For the
-globin gene, the 0.94-kb fragment
obtained by cleavage of a site at
0.46 kb upstream and a site in the
second exon (
0.46,E2) (Fig. 4A) was
not enriched in the HDNA fraction (Fig. 4B and C). This result suggests
that at least one of these two restriction enzyme sites was protamine
associated.
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globin.
For the
-globin gene, four fragments were
examined by using probes
i to
iii, a 0.43-kb fragment spanning
from
1.46 to
0.97 kb upstream (
1.46,
0.97), a 1.45-kb
fragment from
0.97 kb upstream to the second exon (
0.97,E2), a
0.52-kb fragment from the second exon to the second intron (
E2,IVS2), and a 0.62-kb fragment from the second intron to just
downstream of the gene (
IVS2,ds) (Fig.
5A). None of the fragments was enriched
in the HDNA fraction (Fig. 5B and C). Of the two fragments which border on the same DraI site in the second intron, the 0.52-kb
fragment was consistently more depleted than the 0.62-kb fragment in
the HDNA fraction (Fig. 5B and C). This result suggests that the
BamHI site in the second exon displays stronger protamine
association than the downstream DraI site. It can be
inferred from these results that at least one of the two sites
bordering each fragment was protamine associated.
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- and
-globin genes, which are expressed in the
embryo, are associated with histones in human sperm. In contrast, at
the sites examined, no histone-associated regions were detected in the
human
- and
-globin genes. The pattern of histone and protamine
association was constant in different samples from the same person and
between the two donors, with the exception of one site in the intron of
the
-globin gene.
Comparison between
-globin family members.
Further
comparisons between the members of the
-globin family were made for
sites which were located in very similar regions in the different genes
(Fig. 6). First, the 0.87-kb (
0.40,E2) fragment surrounding the 5' end of the
-globin gene was
histone associated, whereas the corresponding 0.94-kb (
0.46,E2)
fragment in the
-globin gene was not enriched in the HDNA fraction
(Fig. 6A). Second, in all sperm preparations from donor 2 and in one from donor 1 (not shown), the 0.32- and 0.38-kb fragments in IVS2 of
globin (
IVS2,IVS2) were histone associated, whereas the similarly located 0.52-kb (
E2,IVS2 and
E2,IVS2) fragments in
the
- and
-globin genes were depleted in the HDNA fraction (Fig.
6B); in the other three sperm preparations from donor 1, the
-globin
intron fragments were distributed equally in the HDNA and PDNA
fractions and the
-globin E2,IVS2 fragment was depleted in the HDNA
fraction (Fig. 6B). Third, the 0.45-kb
-globin (IVS2,ds) fragment
encompassing the third exon of the
-globin gene was histone
associated, whereas the corresponding 0.62-kb (
IVS2,ds) fragment in
the
-globin gene was not enriched in the HDNA fraction (Fig. 6C).
Thus, where direct comparisons can be made, sites in the
-globin
gene are generally more histone associated than those in the
- and
-globin genes.
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Protamine 2.
The gene coding for protamine 2 is expressed
during spermatogenesis prior to the general shutdown of transcription
but is silent in the embryo. In donor 1, three fragments were assayed using probes Pi and Pii (Fig. 7A). Due to
a heterozygous BamHI site (Fig. 7A), two overlapping
fragments 0.80 and 0.88 kb long (protamine 2 E1,ds) are obtained from
sites in exon 1 and just downstream of the gene. A 0.89-kb
DraI fragment (protamine 2 ds,ds) is located completely
downstream of the gene. In donor 2, the BamHI site is
homozygous, so only the 0.80-kb (protamine 2 E1,ds) fragment is
present. For the 0.80 (0.88)-kb (protamine 2 E1,ds) fragment(s), donor
1 consistently showed no enrichment in the HDNA fraction, whereas donor
2 always showed a significant enrichment, over 80% of the level of
enrichment of the
0.4,E2 positive-control fragment (Fig. 7B and
C). Therefore, for donor 1, one or both of the sites is protamine
associated, whereas for donor 2, both sites are histone associated. The
0.89-kb fragment located downstream of the gene, in contrast, was
clearly not enriched in the HDNA fraction of either donor (Fig. 7B and
C), suggesting that the DraI site furthest from the gene is
consistently protamine associated. We suggest that active transcription
in spermatids may tend to cause retention of histones in a transcribed
region. If this is the case for the protamine 2 gene, then it is
probable that the E1 site is histone associated in both donors and that
the variable levels of enrichment of the E1,ds fragment are due to the
downstream site. Despite its association with histones in sperm, the
protamine 2 gene is not expressed in the embryo, as it requires
testis-specific transcription factors for its activation
(16). The observed variation in the E1 and/or 0.36-kb
downstream sites would have no effect on development.
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DISCUSSION |
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The observation that sperm chromatin contains a distinct set of histones with features similar to histones found in active chromatin has led to the hypothesis that the association of these histones with specific gene sequences may be related to the epigenetic control of differential gene expression during embryonic development (12, 13). An alternative hypothesis is that all DNA sequences associated with gene transcription are histone associated in sperm, since the histone-associated portion of the sperm genome is sufficiently large to include all genes. In this study, we examined the histone-DNA association for defined gene sequences in human sperm and discovered that only some gene regions are histone associated in sperm. This finding is consistent with the first hypothesis and contrary to the second hypothesis. Of the 15 DNA fragments analyzed, 14 showed a consistent trend of either histone or protamine association in multiple samples from the same individual and 13 showed similar trends between two donors. There is, therefore, a high degree of conservation in the chromatin structures in human sperm. We also found that sperm DNA can vary from histone to protamine association within a distance as small as 400 bp (Fig. 3), suggesting that the physical configuration of the chromatin within the gene is subject to very fine control.
It is likely that critical chromatin structures are set up in the male germ cells prior to the meiotic divisions, since viable offspring can be produced from eggs fertilized with stages as early as secondary spermatocytes in mice and spermatids in humans (1). Premeiotic germ cells may contain gene regions which are consistently associated with either hyperacetylated or hypoacetylated histones. The regions associated with hyperacetylated histones may retain histones in the mature sperm and remain hyperacetylated in the male pronuclei. Because histone acetylation patterns can be inherited through cell division (29), the hyperacetylated histone structures in male pronuclear DNA could be passed to daughter cells as the embryo develops so that these hyperacetylated regions have the potential for activation. In contrast, the DNA associated with hypoacetylated histones in premeiotic germ cells may complex with protamines in sperm and become reassociated with hypoacetylated histones in the male pronuclei, thus maintaining the gene in a transcriptionally inactive state in the embryo.
Our study has focussed primarily on the human
-globin locus. In the
-globin gene which is expressed in the embryonic yolk sac, two sites
in exons 1 and 2, respectively, are consistently histone associated. A
site in IVS2 was consistently protamine associated. Another site
upstream of the gene at position
0.61 kb, which is located between
the
-PREIV and
-PREII elements identified as being important in
-globin expression (27), consistently shows no
predilection for histone or protamine association, suggesting that
individual sperm cells differ in their chromatin conformation at this
site. In the
-globin gene, which is expressed in the embryonic yolk
sac and in the fetus, four sites located at
0.40 kb upstream, E2,
IVS2, and 0.12 kb downstream of the gene, respectively, are
consistently histone associated, suggesting that a large proportion of
the gene retains its histones in sperm. Another site in IVS2, however,
varies in its level of histone association, both between samples and
between individuals. The results for the
- and
-globin genes
suggest that there are critical regions which are consistently histone
associated and thus are important for gene regulation. Other flanking
regions which display variations in histone association are presumably
of less importance. We consider it likely that the chromatin structure
of a particular site will influence development only if the structure
is the same in all fertile sperm. Other regions of the gene may acquire
an active or inactive chromatin structure later under the influence of
the critical regions.
In the
- and
-globin genes, which are not expressed in the
embryo, no histone-associated sites were detected. The two sites examined in the
-globin gene were at positions
0.46 and E2 which are at similar locations in relation to the histone-associated sites at
position
0.41 and E2 of the
-globin gene. This finding is
consistent with the delayed commencement of
-globin transcription compared to the time of
-globin transcription. In the case of the
-globin gene, the site at
0.97 kb was too far upstream to allow
conclusions about the chromatin structure of the promoter region.
Several sites, however, were examined in the body of the gene.
Sequences in intron 2 and exon 3 are known to be very important in
-globin regulation (6, 8, 15). A
-globin gene fragment from IVS2 to 13 bp downstream is depleted in the HDNA fraction, whereas
a
-globin gene fragment in a similar position, from IVS2 to 120 bp
downstream, is consistently enriched in the HDNA fraction. This result
is consistent with the difference in temporal expression of the
-
and
-globin genes.
Switching of
-globin family expression involves mechanisms which (i)
enable
and
globin to be expressed in the embryonic yolk sac but
prevent
- and
-globin expression at this early stage, (ii)
silence
-globin expression and initiate low-level
-globin
expression in the fetal liver, and (iii) down-regulate
-globin
expression postnatally as
- and
-globin expression increases. A
published study of globin switching focussed on the latter two
phenomena (5). Our results suggest that sperm chromatin structure might contribute to the first phenomenon by causing the
formation of a chromatin structure permissive for
- and
-globin transcription but not for
- and
-globin transcription during early development.
Consistent with this proposal, studies of the behavior of human fetal
chromosomes in cell hybrids, formed by the fusion of human fetal liver
cells and Friend virus-transformed mouse erythroleukemia (MEL) cells,
suggest that the
- and
-globin genes in the fetus differ by
epigenetic modifications which make the
-globin gene permissive and
the
-globin gene relatively nonpermissive for transcription
(10, 22). To date, similar studies have not been performed
on the embryo. When human fetal erythroblasts were examined in terms of
DNase I sensitivity, the G
- and A
-globin
genes were very sensitive, the
-globin gene was moderately sensitive, and the
-globin gene was insensitive (2). The
difference in expression of the genes, however, is not linked to the
presence of hypersensitive sites which are found both in the promoter
regions of the G
- and A
-globin genes and
in the
- and
-globin genes at the fetal stage (15).
The mechanism which prevents histones from being displaced from certain
regions of the
- and
-globin genes during spermatogenesis is
still a matter for conjecture. As all the genes within the
-globin
family have a similar G+C content, we can rule out overall base
composition as an influence. There may, however, be certain DNA motifs
which preferentially retain histones. The LCR with its potential
chromatin-opening activity (9) is located closer to the
-
and
-globin genes than the
- and
-globin genes, so the
tendency to retain histones may increase with the proximity to the LCR.
Hypomethylation and/or active transcription of a DNA sequence
in spermatids as the chromatin condensation begins may lead to
preferential retention of histones. The methylation and transcriptional
statuses of the
-globin locus during human spermatogenesis are not
known.
The protamine 2 gene was studied as an example of a gene which is transcribed in spermatids and is presumed to be in an open chromatin conformation when histones begin to be displaced. In another study where a transgene encompassing the human protamine 1, protamine 2, and transition protein 2 genes was transferred into the mouse germ line, the 28.5-kb segment containing the gene cluster was observed to reside in a DNase I-sensitive domain in sperm leading to the conclusion that this entire 28.5-kb segment was histone associated in sperm (7). In contrast, we have studied the endogenous human protamine 2 gene and have observed that in one of the donors, histone-associated sites are present in E1 and just downstream of the gene, while a site further downstream is protamine associated. In the other donor, either the site in E1 or the site just downstream of the gene is also protamine associated. These results cannot be reconciled with the gene being part of a totally open domain in human sperm.
If sperm chromatin has an influence on development, then the maternal chromatin must achieve a chromatin structure very similar to that of the paternal chromatin in the cleavage stage embryo. We suggest that either the paternal genome influences the maternal genome by allelic cross-talk (14) or the oocyte sets up patterns in the chromatin, which are functionally equivalent to those in the sperm, by means such as differential acetylation of histones. In gene regions where the paternal genome has inherited a different chromatin structure than that of the maternal genome, one can envisage that genomic imprinting could readily occur.
What types of DNA sequences tend to retain histones in sperm? We have
demonstrated that some, but not all, gene sequences in human sperm are
histone associated. Our study of the
-globin gene family supports
the theory that genes expressed in early development tend to be histone
associated. We suggest that an additional candidate for histone
retention is the class of DNA sequences called CpG islands, as these
regions are unmethylated in sperm and are associated with
hyperacetylated histones in somatic cells (26). Centric
heterochromatin is another candidate, since in mice, these regions are
hypomethylated in sperm compared to the adult (11) and they
are found hyperacetylated in embryonic stem cells, with deacetylation
occurring only after differentiation (18). Further studies
of sperm chromatin structure of genes, including imprinted genes and
centric heterochromatin, should increase our understanding of the
transmission of information from the gamete to the embryo.
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ACKNOWLEDGMENTS |
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We are grateful to David Tremethick for helpful discussions and to Peter Rowe, Merlin Crossley, David Tremethick, and Emma Whitelaw for comments on the manuscript.
This work was supported by project grant 940497 from the National Health and Medical Research Council of Australia.
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FOOTNOTES |
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* Corresponding author. Mailing address: Embryology Unit, Children's Medical Research Institute, Locked Bag 23, Wentworthville, NSW 2145, Australia. Phone: 61 2 9687 2800. Fax: 61 2 9687 2120. E-mail: patrict{at}mail.usyd.edu.au.
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