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Mol Cell Biol, June 1998, p. 3483-3494, Vol. 18, No. 6
0270-7306/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
Transactivation by Retinoid X Receptor-Peroxisome
Proliferator-Activated Receptor
(PPAR
) Heterodimers:
Intermolecular Synergy Requires Only the PPAR
Hormone-Dependent
Activation Function
Ira G.
Schulman,*
Gang
Shao, and
Richard A.
Heyman
Department of Retinoid Research, Ligand
Pharmaceuticals, San Diego, California 92121
Received 4 November 1997/Returned for modification 11 December
1997/Accepted 20 March 1998
 |
ABSTRACT |
The ability of DNA sequence-specific transcription factors to
synergistically activate transcription is a common property of genes
transcribed by RNA polymerase II. The present work characterizes a
unique form of intermolecular transcriptional synergy between two
members of the nuclear hormone receptor superfamily. Heterodimers formed between peroxisome proliferator-activated receptor
(PPAR
), an adipocyte-enriched member of the superfamily required for
adipogenesis, and retinoid X receptors (RXRs) can activate
transcription in response to ligands specific for either subunit of the
dimer. Simultaneous treatment with ligands specific for both PPAR
and RXR has a synergistic effect on the transactivation of reporter genes and on adipocyte differentiation in cultured cells. Mutation of
the PPAR
hormone-dependent activation domain (named
c or AF-2)
inhibits the ability of RXR-PPAR
heterodimers to respond to ligands
specific for either subunit. In contrast, the ability of RXR- and
PPAR
-specific ligands to synergize does not require the
hormone-dependent activation domain of RXR. The results of in vitro and
in vivo experiments indicate that binding of ligands to RXR alters the
conformation of the dimerization partner, PPAR
, and modulates the
activity of the heterodimer in a manner independent of the RXR
hormone-dependent activation domain.
 |
INTRODUCTION |
Members of the nuclear hormone
receptor superfamily are ligand-dependent transcription factors that
profoundly influence vertebrate development, differentiation, and
homeostasis (44). The peroxisome proliferator-activated
receptor
(PPAR
), an adipocyte-enriched member of the
superfamily, has been shown to play a pivotal role in the process of
adipocyte differentiation. Ligands that activate PPAR
induce
preadipocytes to differentiate to adipocytes in culture. Furthermore,
overexpression of PPAR
in fibroblasts and myoblasts promotes their
differentiation into adipocytes when PPAR
-specific ligands are
administered (for a recent review, see reference
42). Similarly, PPAR
-specific ligands have been
shown to induce the differentiation of human liposarcomas in vitro
(64). The recent finding that a class of anti-diabetic
insulin-sensitizing drugs, the thiazolodinediones, are ligands for
PPAR
is additional evidence of the important role of this receptor
in human disease (18, 39).
PPAR
, like many members of the nuclear hormone receptor superfamily,
functions as a heterodimer with the retinoid X receptor (RXR; for a
review, see reference 43). Recent work has
identified two types of RXR-dependent heterodimers, nonpermissive and
permissive. In nonpermissive heterodimers, such as those between RXR
and retinoic acid receptors (RARs) or thyroid hormone receptors (TRs),
the partner actively interferes with the ability of RXR to activate transcription in response to RXR-specific ligands. In contrast, permissive heterodimers, such as RXR-PPAR
, allow RXR signaling (for
a review, see reference 37). The ability of RXR to
respond to ligands when dimerized with PPAR
in vivo has been
supported by recent work demonstrating that RXR-specific ligands
enhance insulin sensitivity in diabetic animals (46). Thus,
the RXR-PPAR
heterodimer represents a unique bifunctional
transcription factor that allows integration of two independent
hormonal signaling pathways by a single functional unit.
RXR and PPAR
, like many members of the superfamily, are tripartite
in structure, comprised of an amino-terminal ligand-independent transactivation function, a central DNA binding domain, and a carboxy-terminal ligand binding domain (LBD). The LBD is functionally complex and, along with ligand binding, encodes domains required for
dimerization, repression of transcription in the absence of ligand, and
ligand-dependent activation of transcription (for a review, see
reference 44). The recently published crystal structures of the RXR, RAR, TR, and estrogen receptor LBDs support a
long-standing hypothesis that binding of ligand induces a significant conformational change in receptors. Upon ligand binding, the omega loop
connecting helices 1 and 3 of RAR (helices 2 and 3 of RXR) appears to
undergo a 180° flip. Helix 12, the receptor domain encompassing the
ligand-dependent activation function (named the
c or AF-2 domain),
appears to move almost 90° from a position extended away from the
rest of the LBD to a position loosely packed upon the surface (7,
20, 53, 69). The functional consequence of this conformational
change arises from the ability of different trans-acting
factors to distinctly recognize either unliganded or liganded
receptors. In the absence of ligand, many receptors interact with a
family of corepressors (silencing mediator of retinoid and thyroid
receptors [SMRT] and nuclear receptor corepressor [NCoR]) that
actively repress transcription. Upon ligand binding, the
ligand-dependent conformational change results in the release of
corepressors and promotes interactions with positively acting cofactors
(for a recent review, see reference 21). The
essential role of the
c/AF-2 domain in receptor activity is
illustrated by the observation that deletion or mutation of this domain
produces receptors that bind ligand normally but fail to release
corepressors or interact with coactivators (3, 9, 11, 12, 15, 25, 27, 28, 35, 50, 54, 55, 61, 62, 65, 68). Thus, the observation
that RXR-PPAR
heterodimers respond to ligands binding to either
subunit suggests that the
c/AF-2 domains of both receptors can
independently activate transcription.
In this work we have observed that not only are RXR-PPAR
heterodimers permissive for activation by RXR- and PPAR
-specific ligands individually, but together ligands specific for each receptor can synergistically activate transcription and promote adipocyte differentiation in cultures. Surprisingly, the ability of RXR-specific ligands to act synergistically with PPAR
-specific ligands does not
require the hormone-dependent activation function (
c/AF-2 domain) of
RXR. The results of in vitro and in vivo experiments indicate that
ligand binding to RXR influences the conformation and activity of
PPAR
in a fashion independent of the RXR
c/AF-2 domain.
 |
MATERIALS AND METHODS |
Plasmids.
GAL4 DNA binding domain fusions of the
receptor-interacting domains of mouse CREB binding protein (CBP) (amino
acids 1 to 171) and human steroid receptor coactivator 1 (SRC-1) (amino
acids 381 to 891) were made by PCR amplification of the appropriate regions followed by cloning into pCMX-GAL4 (55). Glutathione S-transferase (GST)-CBP (amino acids 1 to 352) and
GST-SRC-1 (amino acids 381 to 891) were made by PCR amplification of
the appropriate fragments followed by cloning into pGEX-5X-1
(Pharmacia). All PCR products were verified by DNA sequencing. To
construct the RXR
c/AF-2 domain mutant in which both the methionine
at position 454 and the leucine at position 455 were changed to alanine
(M454A/L455A), the complete coding region of human RXR
was amplified
by PCR using oligonucleotides that had the appropriate mutation
introduced. Following amplification, the correct fragment was cloned
into pCMX (66) and verified by DNA sequencing. To introduce
the RXR
c/AF-2 domain mutant into the context of the VP16-RXRLBD
vector, the LBD fragment from pCMX-RXR(M454A/L455A) was isolated by
digestion with SalI and NheI and used to replace
the wild-type LBD in pCMXVP16-RXRLBD (19). To construct the
PPAR
c/AF-2 domain mutant in which the leucines at positions 466 and 467 were changed to alanine (L466A/L467A), amino acids 250 to 474 of mouse PPAR
were amplified by PCR using an oligonucleotide
containing the appropriate mutation. After amplification, the fragment
was digested with EcoRI and NheI and used to
replace the wild-type fragment in pCMX-mPPAR
(32) and
verified by DNA sequencing. To express the PPAR
L466A/L467A LBD,
pCMX-PPAR
(L466A/L467A) was digested with ScaI and
NheI and the mutant fragment was used to replace the
wild-type PPAR
LBD in pCMXHANLS-PPAR
LBD (18).
Expression plasmids for human RXR
, mouse PPAR
, VP16-RXRLBD,
PPAR
LBD,
-galactosidase, the GST-RXR bacterial expression
plasmid, and the reporters PPREx3-TK-LUC and UASGx4-TK-LUC
have been previously described (18, 19, 32, 38, 55, 66).
Cell culture and transfection.
NIH 3T3 cells were cultured
in Dulbecco modified Eagle medium (DMEM) supplemented with 10% fetal
bovine serum. Prior to transfection, cells were seeded in 48-well
plates (1.5 × 104 cells/well) in DMEM supplemented
with 10% charcoal-resin-treated fetal bovine serum. After 12 to
16 h of growth at 37°C, cells were transfected with the
N-[1-(2,3)-dioleoloxy)propyl]-N,N,N-trimethylammonium methylsulfate (DOTAP) transfection reagent following the
manufacturer's instructions (Boehringer Mannheim). For each well, 12 ng of luciferase reporter, 36 ng of the appropriate expression
construct, and as an internal control, 60 ng of pCMX-
gal was
transfected. When necessary, the parental expression plasmid pCMX was
added to ensure that equal amounts of DNA were transfected in each
well. After 5 h at 37°C, the medium was removed, the cells were
washed once, and 200 µl of fresh medium was added with or without the
ligands described in the legend to each figure. Cells were harvested
after an additional 36 h of growth at 37°C. Luciferase activity
of each sample was normalized by the level of
-galactosidase
activity. Each transfection was carried out in duplicate and repeated
at least three times.
Electrophoretic mobility shift assays.
Receptors were
produced with a T7 Quick TNT in vitro
Transcription/Translation Kit (Promega). Reactions were set up in a
final volume of 20 µl of 1× binding buffer (20 mM HEPES [pH 7.5],
75 mM KCl, 2.0 mM dithiothreitol [DTT], 0.1% Nonidet P-40 [NP-40], 7.5% glycerol) with 1.0 µl (each) of the appropriate unlabeled receptors, 2.0 µg of poly(dI-dC), and 0.02 pmol of an
32P-labeled oligonucleotide with a single peroxisome
proliferator response element (PPRE) derived from the acyl-coenzyme A
(acyl-CoA) oxidase promoter (GTCGACAGGGGACC AGGACA A
AGGTCA CGTTCGGGAGT; boldfacing indicates the
direct repeat). The receptor-specific ligands, 1.0 µM LG100268 and
1.0 µM BRL49653, were added to the appropriate samples, and
heterodimers were allowed to assemble on DNA in the presence or absence
of ligands for 20 min at room temperature. After this initial
incubation, the crosslinker bis(sulfosuccinimidyl)suberate was added to
final concentration of 1.0 mM and the reaction mixture was incubated
for 20 min at room temperature. To stop the cross-linking, Tris (pH
8.0) was added to a final concentration of 100 mM and the DNA-protein
complexes were resolved on 5% nondenaturing acrylamide gels. After
electrophoresis, the gels were dried and exposed to film.
Far-Western blotting.
GST fusion proteins were purified as
previously described (54) and resolved on sodium dodecyl
sulfate (SDS)-10% acrylamide gels. After electrophoresis, the
proteins were transferred to polyvinylidene fluoride membranes (Novex)
for 2 h at 60 V. Following transfer, the proteins on the blot were
renatured by two 30-min washes at room temperature in HB buffer (25 mM
HEPES [pH 7.7], 25 mM NaCl, 5 mM MgCl2, 1 mM DTT)
containing 6.0 M guanidine HCl. After the first two washes, the
guanidine HCl was diluted 1:1 with fresh HB buffer and washed for
another 30 min. Dilution of the guanidine HCl (1:1) was repeated until
a concentration of 0.187 M was reached. After renaturation, the blot
was washed in HB buffer for 1 to 2 h at room temperature. To block
nonspecific binding, the blot was washed in HB buffer containing 5%
nonfat dry milk for 30 min at room temperature followed by a second
30-min wash in HB buffer plus 1.0% nonfat dry milk. In
vitro-translated 35S-labeled RXR and
35S-labeled PPAR
were produced using a T7
Quick TNT in vitro Transcription/Translation Kit (Promega).
Equal amounts of 35S-labeled receptors were used, as
determined by phosphorimaging analysis of SDS-acrylamide gels. To
determine the effect of ligands, receptors were preincubated for 1 h with 1.0 µM LG100268 (RXR) or 5.0 µM BRL49653 (PPAR
) before
being mixed with the blots. Receptors were then incubated with the
blots in 5.0 ml of H buffer (20 mM HEPES [pH 7.7], 75 mM KCl, 2.5 mM
MgCl2, 1 mM DTT, 0.1 mM EDTA, 0.05% NP-40, 1.0% nonfat
dry milk) in the presence of ligands. Purified GST (5.0 µg/ml) was
added to the incubation along with 5.0 µM LG100268 or 5.0 µM
BRL49653 when appropriate. The blots were then incubated 14 to 16 h at 4°C. Following incubation with 35S-labeled
receptors, the blots were washed four times for 15 min each time at
room temperature with buffer H, air dried, and exposed to film.
Protease protection.
Unlabeled or 35S-labeled
receptors were produced using a T7 Quick TNT in
vitro Transcription/Translation Kit (Promega). Reactions were set
up in a final volume of 20 µl of 1× binding buffer (20 mM HEPES [pH
7.5], 75 mM KCl, 2.0 mM DTT, 0.1% NP-40, 7.5% glycerol) with 1.0 µl of the appropriate unlabeled or 35S-labeled receptors,
2.0 µg of poly(dI-dC), and 0.1 pmol of an oligonucleotide with a
single PPRE derived from the acyl-CoA oxidase promoter (GTCGACAGGGGACC
AGGACA A AGGTCA CGTTCGGGAGT). For every
sample, the total volume of reticulocyte lysate from the in
vitro-translated receptors was 2.0 µl. The receptor-specific ligands,
1.0 µM LG100268 and 5.0 µM BRL49653, were added to the appropriate
samples, and heterodimers were allowed to assemble on DNA in the
presence or absence of ligands for 20 min at room temperature. After
this initial incubation, 1.0 µg of modified sequencing grade trypsin
(Boehringer Mannheim) was added and allowed to digest for 20 min at
room temperature. The reactions were stopped by addition of an equal
volume of 2× SDS gel sample buffer and immediate boiling for 3 min,
and then 25% of each sample was resolved on SDS-14% acrylamide gels.
After electrophoresis, the gels were fixed, treated for 20 min with
Amplify (Amersham), dried, and exposed to film.
 |
RESULTS |
Synergistic activation by RXR- and PPAR
-specific ligands.
Several studies have indicated that RXR-PPAR
heterodimers activate
transcription in response to both RXR- and PPAR
-specific ligands
(16, 32, 46, 64). The permissive nature of RXR-PPAR
heterodimers is illustrated by the transfection experiment in Fig.
1A examining the response to
receptor-specific ligands. NIH 3T3 cells were chosen as the recipient
for transfection, because in the absence of cotransfected receptors
these cells do not exhibit a detectable response to either RXR- or
PPAR
-specific ligands. Also, in NIH 3T3 cells, the ability to detect
a response to the PPAR
-specific ligand BRL49653 requires
transfection of expression plasmids for both PPAR
and RXR (data not
shown). The requirement for transfection of both RXR and PPAR
provides the opportunity to determine the contributions of each
receptor subunit without complications arising from endogenous
receptors. When expression plasmids for both RXR and PPAR
are
transfected, a response to both RXR-specific (LG100268) (6)
and PPAR
-specific (BRL49653) (18, 39) ligands is observed
(Fig. 1A).

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FIG. 1.
Synergistic activation by RXR- and PPAR -specific
ligands. (A) NIH 3T3 cells were transfected with PPREx3-TK-LUC and
expression constructs for mouse PPAR and human RXR . After
transfection, cells were cultured in the absence (None) or presence of
the RXR-specific ligand LG100268 (1.0 µM), the PPAR -specific
ligand BRL49653 (5 µM), or 1.0 µM LG100268 plus 5.0 µM BRL49653
for 36 h. Activity relative to that of the PPREx3-TK-LUC reporter
alone is reported. Each number above a bar indicates the fold induction
relative to the activity in the absence of ligand. Note the break in
the y axis. Transfections were normalized by cotransfection
with a -galactosidase expression plasmid (see Materials and
Methods). (B to E). Confluent 3T3 L1 preadipocytes were cultured for 7 days in the absence (B) or presence of 100 nM BRL49653 (C), 100 nM
LG100268 (D), or 100 nM BRL49653 plus 100 nM LG100268 (E). After
treatment, cells were stained with oil red O to visualize lipids.
|
|
The results of Fig.
1A described above indicate that RXR-PPAR

heterodimers can respond to either RXR- or PPAR

-specific ligands.
When NIH 3T3 cells transfected with RXR and PPAR

are treated
with
the combination of LG100268 and BRL49653, transactivation
threefold
greater than the sum of each ligand alone is observed,
indicating that
activation of the individual subunits leads to
a synergistic response
(Fig.
1A; note the break in the
y axis).
Synergy is also
observed using the natural RXR ligand 9-
cis-retinoic
acid
(data not shown). To determine if the synergy observed with
receptor-specific ligands in transfection experiments holds true
for
endogenous RXR-PPAR

heterodimers in vivo, the ability of
LG100268
and BRL49653 to differentiate 3T3 L1 preadipocytes was
examined (Fig.
1B to E). Several laboratories have shown that
treatment of 3T3 L1
preadipocytes with ligands that activate PPAR
induces a genetic
program that leads to adipocyte differentiation
(
10,
18,
31,
63,
64). Preadipocytes treated with receptor-specific
ligands alone
or in combination for 7 days were fixed and stained
with oil red O to
visualize lipids. At suboptimal concentrations
(100 nM), BRL49653 (Fig.
1C) or LG100268 (Fig.
1D) poorly promote
adipocyte differentiation. In
contrast, the combination of ligands
has a synergistic effect,
producing an endogenous response significantly
greater than the
additive effects of each ligand alone (Fig.
1E),
consistent with the
synergy observed in transfection experiments
in Fig.
1A.
Receptor-specific ligands promote differential interactions with
CBP and SRC-1.
To begin to address the mechanism of synergistic
transactivation by RXR-PPAR
heterodimers, the ability of
receptor-specific ligands to promote interactions with CBP, a known
coactivator for the nuclear hormone receptor superfamily, was examined
(for a recent review, see reference 21). Western
blotting experiments indicate that CBP is present at a constant level
throughout 3T3 L1 adipocyte differentiation (data not shown). Figure
2A illustrates the modified mammalian
two-hybrid system used to examine interactions between RXR-PPAR
heterodimers and CBP. NIH 3T3 cells were transfected with constructs
expressing a GAL4-CBP fusion (amino acids 1 to 171 of CBP encoding the
receptor-interacting domain), a VP16 activation domain-RXR LBD fusion
(VP16-RXRLBD), and the LBD of PPAR
(PPAR
LBD). The results show
that the PPAR
-specific ligand BRL49653 promotes a relatively strong
interaction with CBP (8.2-fold above the activity observed in the
absence of ligands [Fig. 2A]). The RXR-specific ligand LG100268 also
promotes a detectable interaction with CBP, although the
LG100268-dependent CBP interaction is weaker than the
BRL49653-dependent interaction (3.1-fold above the activity in the
absence of ligands [Fig. 2A]). Once again, the combination of ligands
has a synergistic effect, giving rise to signal 30.3 times that
observed in the absence of ligands and approximately 3-fold more than
the sum of the individual receptor-specific ligands. When the
VP16-RXRLBD fusion is omitted from the transfection, no signal is
detected, indicating that a RXR-PPAR
heterodimer is required to
detect a response to BRL49653 in this assay (Fig. 2B). Transfection of
a VP16-PPAR
fusion alone, however, does allow a BRL49653-dependent
interaction with CBP (data not shown; see Fig. 4).

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FIG. 2.
RXR- and PPAR -specific ligands synergistically
promote interaction with CBP. (A) A fusion between the DNA binding
domain (DBD) of GAL4 and the receptor-interacting domain of CBP (amino
acids 1 to 171) was cotransfected into NIH 3T3 cells along with a
construct expressing a VP16 activation domain-human RXR ligand
binding domain fusion protein (VP16-RXRLBD) and a construct expressing
the LBD of mouse PPAR (PPAR LBD). A luciferase reporter with four
GAL4 binding sites (UASGx4-LUC) was also included. After
transfection, cells were cultured in the absence (None) or presence of
the RXR-specific ligand LG100268 (1.0 µM), the PPAR -specific
ligand BRL49653 (5.0 µM), or 1.0 µM LG100268 plus 5.0 µM BRL49653
for 36 h. Activity relative to GAL4-CBP (amino acids 1 to 171)
alone is reported. Panels B and C are identical to panel A except that
VP16-RXRLBD (B) or PPAR LBD (C) was omitted. Note the y
axis in panel A differs from that in panels B and C. Panels D to F are
identical to panels A to C except that GAL4-CBP (amino acids 1 to 171)
was replaced with a fusion between the DNA binding domain of GAL4 and
the central receptor-interacting domain of human SRC-1 (amino acids 381 to 891). Each number above a bar indicates the fold induction relative
to the activity in the absence of ligand. Transfections were normalized
by cotransfection with a -galactosidase expression plasmid (see
Materials and Methods).
|
|
To examine the interaction between RXR homodimers and CBP, a standard
mammalian two-hybrid assay comprised of GAL4-CBP and
VP16-RXRLBD was
used (Fig.
2C). Addition of the RXR-specific ligand
LG100268 promotes
an interaction similar to that observed with
RXR-PPAR

heterodimers
(4.5-fold above the activity in the absence
of ligands; note the
different
y axes for Fig.
2A and C). The
relatively weak
interaction between RXR and CBP is similar to
that observed by other
investigators using this assay (
9).
A similar modified two-hybrid assay (VP16-RXRLBD plus PPAR

LBD) was
used to examine interactions between RXR-PPAR

heterodimers
and a
second coactivator, SRC-1 (for a recent review, see reference
21). As observed with CBP, addition of the
RXR-specific ligand
LG100268 promotes an interaction with SRC-1 (Fig.
2D). The PPAR

-specific
ligand BRL49653, however, has little or no
effect (Fig.
2D). In
contrast to CBP, combining the two ligands is not
synergistic
and a signal similar to that observed with LG100268 alone
is obtained
(Fig.
2D). Interestingly, a relatively weak
BRL49653-dependent
interaction between RXR-PPAR

heterodimers and
SRC-1 can be detected
in CV-1 cells by the same two-hybrid assay (data
not shown), suggesting
that species and/or tissue-specific factors may
influence receptor-coactivator
interactions.
The results of the modified two-hybrid analysis of Fig.
2 suggest that
treatment with RXR- and PPAR

-specific ligands favors
recruitment of
different coactivators. To confirm the observed
differences in
coactivator recruitment, electrophoretic mobility
shift assays were
performed with in vitro-translated receptors
and recombinant GST fusion
proteins (Fig.
3A and B). Incubation
of
GST-CBP (amino acids 1 to 352) in a standard gel shift assay
with
RXR-PPAR

heterodimers bound to a single
32P-labeled PPRE
results in the appearance of a slower-migrating
RXR-PPAR

-CBP complex
(Fig.
3A, lanes 5 and 6). The RXR-PPAR

-CBP
complex is increased by
treatment with BRL49653 (Fig.
3A, lanes
6 and 7; 3-fold as determined
by phosphorimaging analysis of three
independent experiments), while
treatment with LG100268 has little
or no effect (Fig.
3A, lane 8). The
results of gel shift experiments
comparing constitutive and
ligand-stimulated CBP interactions
correlate well with the results of
the modified two-hybrid assay.
In contrast to the modified two-hybrid
analysis, however, the
combination of receptor-specific ligands in the
gel shift assay
does not result in synergistic recruitment of CBP. The
inability
to detect synergy in the gel shift assay may result from the
relative
insensitivity of the gel shift assay, the effects of ligands
on
receptor dimerization, or the requirement for additional
trans-acting
factors that are absent from the in vitro
system (see Discussion).
A similar gel shift assay was used to examine
interactions with
SRC-1 (amino acids 381 to 891) (Fig.
3B). In
agreement with the
two-hybrid results, the addition of the RXR-specific
ligand LG100268
promotes the appearance of a slower-migrating
RXR-PPAR

-SRC-1
complex, while the PPAR

-specific ligand BRL49653
does not. The
combination of receptor-specific ligands is not
significantly
different from LG100268 alone (Fig.
3B, lanes 2 to 5).

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FIG. 3.
RXR and PPAR prefer different coactivators. (A) In
vitro-translated receptors were incubated with a
32P-labeled PPRE oligonucleotide and 10 µg of GST (lanes
2 to 5) or GST-CBP (amino acids 1 to 352) (lanes 6 to 17). DNA-protein
complexes were resolved as described in Materials and Methods. As noted
above the gel, 1.0 µM BRL49653 and/or LG100268 were included (+) or
not included ( ). Heterodimers formed with wild-type RXR and wild-type
PPAR (lanes 1 to 9), with wild-type RXR and mutant PPAR
L466A/L467A (lanes 10 to 13), and with mutant RXR M454A/L455A and
wild-type PPAR (lanes 14 to 17) are shown. A nonspecific band
derived from the reticulocyte lysate is indicated by the asterisk. (B)
Interaction with SRC-1 was carried as described in panel A using
wild-type receptors. GST-SRC-1 (amino acids 381 to 891) (10 µg) was
included in lanes 2 to 5. (C) The interaction of PPAR and RXR
with CBP and SRC-1 was examined by far-Western blotting. A Coomassie
blue-stained gel (Stain Gel) of immobilized GST fusion proteins and
far-Western blots probed with 35S-labeled PPAR or
35S-labeled RXR are shown. Molecular mass markers (lane 1),
GST (lanes 2, 6, 10, 14, and 21), GST-SRC-1 (amino acids 381 to 891)
(lanes 3, 7, 11, 15, and 19), GST-CBP (amino acids 1 to 352) (lanes 4, 8, 12, 16, and 20), and GST-RXR (lanes 5, 9, 13, 17, and 21) were used.
After electrophoresis, proteins were transferred to polyvinylidene
difluoride membranes, renatured, and incubated with
35S-labeled mPPAR in the absence ( Ligand) or presence
of 5 µM BRL49653 or with 35S-labeled RXR in the absence
( Ligand) or presence of 5 µM LG100268.
|
|
The results of Fig.
2 and
3 indicate that the PPAR

-specific ligand
BRL49653 promotes a stronger interaction between RXR-PPAR
heterodimers and CBP than the RXR-specific ligand LG100268 does.
On the
other hand, LG100268 promotes a stronger interaction between
RXR-PPAR

heterodimers and SRC-1 than BRL49653 does. One
interpretation
of this result is that the relative affinities of the
individual
PPAR

and RXR subunits for CBP and SRC-1 are different. To
test
this hypothesis, far-Western blots were used to analyze direct
interactions between the individual in vitro-translated subunits
of the
heterodimer and the receptor-interacting domain of CBP
and SRC-1.
Figure
3C shows that in vitro-translated
35S-labeled
PPAR

makes a strong interaction with immobilized CBP
(lanes 8 and
12), while a weak but detectable interaction is observed
with
immobilized SRC-1 (lanes 7 and 11). The PPAR

-CBP interaction
is
stimulated approximately threefold by BRL49653 (compare lane
8 with
lane 12). As expected, PPAR

has a strong interaction with
immobilized RXR (lanes 9 and 13). In contrast, when in vitro-translated
35S-labeled RXR is used as the probe, little or no
interaction with
CBP is observed (lanes 16 and 20). Nevertheless, a
relatively
strong LG100268-dependent interaction with SRC-1 is detected
(lane
19). The ability to detect an RXR-CBP interaction in vivo (Fig.
2C) most likely arises from the increased sensitivity of the two-hybrid
assay relative to that of far-Western blotting. Nevertheless,
the
possibility that the RXR-CBP interaction is indirect or requires
additional cofactors absent from the in vitro system cannot be
ruled
out. Taken together, the results of Fig.
2 and
3 support
the conclusion
that the individual RXR and PPAR

subunits prefer
different
coactivators.
The RXR
c/AF-2 domain is not required for synergistic
transactivation.
The ability of receptor-specific ligands to
synergistically activate transcription suggests that the
hormone-dependent activation functions (
c/AF-2 domain) of both RXR
and PPAR
participate in transactivation. As expected from this
prediction, inactivation of the PPAR
c/AF-2 domain by mutating
the leucines at positions 466 and 467 to alanine (L466A/L467A)
eliminates the response to the PPAR
-specific ligand BRL49653 (Fig.
4A and B) while only producing a modest
twofold decrease in hormone-independent basal activity (Fig. 4A and B,
white bars). Similar results are observed when the CBP interaction is
examined by the two-hybrid (Fig. 4C and D) and gel shift assays (Fig.
3A, lanes 10 to 13). In the CBP interaction assays, however, mutation
of the PPAR
c/AF-2 domain also significantly reduces the
hormone-independent CBP interaction (compare the white bars in Fig. 4C
and D and lane 6 with lane 10 in Fig. 3A). The requirement for the
PPAR
c/AF-2 domain in the hormone-independent interaction with
CBP indicates that either an endogenous ligand is present in both NIH
3T3 cells and reticulocyte lysate or that the PPAR
c/AF-2 domain
can be at least partially active in the absence of the ligand. We have previously suggested that in the absence of ligands receptors exist in
a dynamic equilibrium shifting between active and inactive conformations (55).

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FIG. 4.
Inactivation of the PPAR c/AF-2 domain inhibits
the response to RXR- and PPAR -specific ligands. (A) NIH 3T3 cells
were transfected with a reporter containing three copies of the
acyl-CoA oxidase PPRE cloned upstream of the thymidine
kinase-luciferase (TK-LUC) reporter (PPREx3-TK-LUC) and expression
constructs for mouse PPAR and human RXR . Panel B is identical to
panel A except that a PPAR c/AF-2 domain double point mutant
(L466A/L467A) was used in place of the wild-type PPAR . After
transfection, cells were cultured in the absence (None) or presence of
the RXR-specific ligand LG100268 (1.0 µM), the PPAR -specific
ligand BRL49653 (5.0 µM), or 1.0 µM LG100268 plus 5.0 µM BRL49653
for 36 h. Activity relative to that of the PPREx3-TK-LUC reporter
alone is reported. Note the break in the y axis. (C) A
fusion between the DNA binding domain of GAL4 and the
receptor-interacting domain of CBP (amino acids 1 to 171) was
cotransfected into NIH 3T3 cells along with constructs expressing a
VP16 activation domain-human RXR ligand binding domain (VP16-RXRLBD)
fusion protein and the LBD of mouse PPAR (PPAR LBD). Panel D is
identical to panel C except that a PPAR c/AF-2 domain double
point mutant (L466A/L467A) was used in place of the wild-type PPAR .
After transfection, cells were cultured in the absence (None) or
presence of 1.0 µM LG100268, 5.0 µM BRL49653, or 1.0 µM LG100268
plus 5.0 µM BRL49653 for 36 h. Activity relative to GAL4-CBP
(amino acids 1 to 171) alone is reported. Note the break in the
y axis. Each number above a bar indicates the fold induction
relative to the activity in the absence of ligand. Transfections were
normalized by cotransfection with a -galactosidase expression
plasmid (see Materials and Methods). Western blot experiments indicate
that the PPAR mutant is expressed at a level similar to the
wild-type level (data not shown).
|
|
Interestingly, inactivation of the PPAR

c/AF-2 domain also
reduces activation by the RXR-specific ligand LG100268 by 80%
(Fig.
4A
and B). The synergistic recruitment of CBP in the two-hybrid
assay is
also eliminated (Fig.
4C and D, shaded bars). The residual
response to
LG100268 observed in the two-hybrid experiment most
likely arises from
the activity of RXR homodimers (compare Fig.
2C with Fig.
4D). The
results of Figure
4 indicate that inactivation
of the PPAR

c/AF-2
domain has a negative effect on RXR signaling.
Thus, mutation of the
PPAR

c/AF-2 domain transforms a heterodimer
permissive for RXR
signaling into a nonpermissive heterodimer
(see Discussion).
To determine the contribution of the RXR

c/AF-2 domain to
synergistic activation by RXR-PPAR

heterodimers, the RXR

c/AF-2
domain mutant M454A/L455A was examined. The M454A/L455A mutant
eliminates the ability of RXR homodimers to respond to LG100268
bound
to the PPREx3 reporter (Fig.
5A and B),
the cellular retinol-binding
protein type II (CRBPII) RXR response
element, and as a GAL4-RXRLBD
fusion (
54,
56) (data not
shown). This mutant also eliminates
the ability to detect
ligand-dependent interactions with all coactivators
tested but still
binds ligand with wild-type affinity (
54) (data
not shown).
In contrast to the negative effect of the PPAR

c/AF-2
domain
mutant (Fig.
4), inactivation of the RXR

c/AF-2 domain
has little or
no effect on the ability of RXR-PPAR

heterodimers
to respond to the
PPAR

-specific ligand BRL49653 in either transactivation
assays (Fig.
5C and D), two-hybrid assays (Fig.
5E and F), or
gel shift assays (Fig.
3A, lanes 14 to 17). Strikingly, even when
the RXR

c/AF-2 domain is
inactivated, the addition of LG100268
significantly enhances the
activity of BRL49653 in both transfection
and two-hybrid assays.
Similar results are observed when other
RXR

c/AF-2 domain mutants
are examined (data not shown).

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FIG. 5.
Inactivation of the RXR c/AF-2 domain still allows
synergy with PPAR -specific ligands. (A and B) NIH 3T3 cells were
transfected with a reporter containing three copies of the acyl-CoA
oxidase PPRE cloned upstream of the TK-LUC reporter (PPREx3-TK-LUC) and
expression constructs for human RXR (wild type) or the human RXR
c/AF-2 domain mutant M454A/L455A. After transfection, cells were
cultured in the absence (None) or presence of the RXR-specific ligand
LG100268 (1.0 µM) for 36 h. Activity relative to that of the
reporter alone is reported. Western blot experiments indicate that the
RXR mutant is expressed at levels similar to the wild-type level (data
not shown). C and D) NIH 3T3 cells were transfected with a reporter
containing three copies of the acyl-CoA oxidase PPRE cloned upstream of
the TK-LUC reporter (PPREx3-TK-LUC), an expression construct for mouse
PPAR , and expression constructs for human RXR (wild type) (C) or
the RXR c/AF-2 domain mutant M454A/L455A (D). After transfection,
cells were cultured in the absence (None) or presence of 1.0 µM
LG100268, 5.0 µM BRL49653, or 1.0 µM LG100268 plus 5.0 µM
BRL49653 for 36 h. Activity relative to that of the
PPREx3-luciferase reporter alone is reported. Note the break in the
y axis. (E and F) A fusion between the DNA binding domain of
GAL4 and the receptor-interacting domain of CBP (amino acids 1 to 171)
was cotransfected into NIH 3T3 cells along with a construct expressing
the LBD of mouse PPAR (PPAR LBD) and constructs expressing
VP16-RXRLBD (wild type) (E) or VP16-RXRLBD fusions with the M454A/L455A
mutation (F). After transfection, cells were cultured in the absence
(None) or presence of 1.0 µM LG100268, 5.0 µM BRL49653, or 1.0 µM
LG100268 plus 5.0 µM BRL49653 for 36 h. Activity relative to
that of GAL4-CBP (amino acids 1 to 171) alone is reported. Western blot
experiments indicate that the RXR mutants are expressed at levels
similar to the wild-type level (data not shown). Each numbers above a
bar indicates the fold induction relative to the activity in the
absence of ligand. Transfections were normalized by cotransfection with
a -galactosidase expression plasmid (see Materials and Methods).
|
|
Numerous studies have suggested that binding of ligand to members of
the nuclear hormone receptor superfamily induces a conformational
change required for receptor-mediated transactivation (for reviews,
see
references
57 and
72). The
results of Fig.
5 indicate
that binding of ligand to RXR can have a
positive effect on activation
by RXR-PPAR

heterodimers in the
absence of the RXR hormone-dependent
activation function (

c/AF-2
domain). The ability to separate
a positive effect of LG100268 binding
from the transactivation
function of RXR suggests that not only does
binding of ligand
to RXR alter its own conformation but that the
conformation of
PPAR

must also be influenced. A large body of work
has shown
that binding of ligands to nuclear hormone receptors makes
receptors
more resistant to limited protease digestion (
1,
2,
5,
20,
30,
40,
41,
45,
58,
67,
75). The more-compact
structures
observed by crystallography for the liganded LBDs of
RAR, TR, and
estrogen receptor compared to the unliganded LBD
of RXR support
the idea that the resistance to protease digestion
observed in the
presence of ligands correlates with the ability
of a ligand to induce
receptors to undergo a conformation change.
To test the hypothesis that LG100268 binding to RXR can affect the
conformation of PPAR

, protease protection experiments
were performed
with dimers comprised of unlabeled RXR and
[
35S]methionine-labeled PPAR

assembled on DNA (Fig.
6; see Materials
and Methods). Consistent
with the earlier work described above,
addition of the PPAR

-specific
ligand BRL49653 leads to increased
protection of PPAR

from digestion
compared to the level of digestion
in the absence of ligand (Fig.
6A,
compare lane 3 to lane 5).
The RXR-specific ligand LG100268 also leads
to increased protection
of PPAR

(Fig.
6A, compare lane 3 to lane 4).
Quantitation from
six independent experiments indicates that LG100268
results in
a 4-fold (±1.5-fold) increase in intensity of the top band
of
the doublet migrating at 46 kDa. This band is the tryptic fragment
whose digestion is most affected by LG100268. Addition of both
ligands
leads to protection slightly greater than that observed
with BRL49653
alone (Fig.
6A, lanes 5 and 6; quantitation of the
top band of the
doublet migrating at 46 kDa from six experiments
indicates an average
difference of 2.3-fold). Interestingly, the
pattern of protection
produced by the two ligands is slightly
different. Addition of LG100268
results in protection of the doublet
migrating at approximately 46 kDa
(Fig.
6A, lane 4). In comparison,
addition of BRL49653 results in
significant protection of the
doublet migrating just above the 30-kDa
marker along with the
46-kDa doublet (Fig.
6A, lane 5). The difference
in digestion
patterns suggests that the two ligands may induce slightly
different
conformations in PPAR

.

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FIG. 6.
Ligand binding to RXR alters the protease sensitivity of
PPAR . In vitro-translated receptors were incubated with an
oligonucleotide containing a single PPRE and receptor-specific ligands.
After this initial incubation, trypsin was added for 20 min (lanes 3 to
6), the reaction was stopped, and the 35S-labeled peptides
were visualized by autoradiography (see Materials and Methods).
35S-labeled PPAR plus unlabeled RXR (wild type) (A)
35S-labeled PPAR plus unlabeled RXR M454A/L455A
( c/AF-2 domain mutant) (B), 35S-labeled PPAR plus
unlabeled RXR L436S (ligand binding mutant) (C),
35S-labeled PPAR alone (D), and unlabeled PPAR plus
35S-labeled RXR (wild type) (E) are shown. All
autoradiographs were exposed for 15 h. In each panel,
14C-labeled molecular mass markers (lane 1), undigested
controls (lane 2), no ligand (lane 3), 1.0 µM LG100268 (RXR specific)
(lane 4), 5.0 µM BRL49653 (PPAR specific) (lane 5), and 1.0 µM
LG100268 plus 5.0 µM BRL49653 (lane 6) were run.
|
|
The results of Fig.
6A support the hypothesis that the binding of
ligand to RXR influences the conformation of PPAR

. To determine
whether the RXR

c/AF-2 domain is necessary for the
LG100268-dependent
protection of PPAR

, an experiment similar to that
in Fig.
6A
was performed with the RXR mutant M454A/L455A (Fig.
6B). As
observed
with wild-type RXR, addition of the RXR-specific ligand
LG100268
increases protection of PPAR

from trypsin digestion (Fig.
6B,
compare lanes 3 to lane 4). Thus, consistent with the results
of
Fig.
5, the ability of LG100268 to influence the conformation
of
PPAR

is

c/AF-2 domain independent.
To confirm the protective effect of LG100268 was mediated by binding to
RXR, the RXR ligand binding mutant in which leucine
at position 436 was
changed to serine (L436S) was examined in
protease protection
experiments (Fig.
6C). The L436S mutant exhibits
no detectable binding
to RXR agonists in vitro and fails to activate
transcription in
response to LG100268 in transfection experiments
(
51). As
expected, comparison of the 46-kDa doublet in lanes
3 and 4 of Fig.
6C
demonstrates that the ability of LG100268 to
protect PPAR

from
digestion requires binding to RXR.
To ensure the protective effect of LG100268 on PPAR

requires RXR, a
protease protection experiment was performed in the absence
of RXR
(Fig.
6D). In the absence of RXR, LG100268 has little or
no effect on
the trypsin sensitivity of PPAR

(Fig.
6D, compare
lane 3 to lane 4).
As expected, protection of PPAR

by BRL49653
is still observed (Fig.
6D, compare the 30-kDa doublet in lanes
3 and 5). A similar result to
Fig.
6D is seen if RXR is included
and the PPRE oligonucleotide is
omitted from the experiment (data
not shown). The requirement for DNA
binding most likely arises
by promoting efficient heterodimerization.
Comparison of Fig.
6A with D also indicates that the doublet migrating
at approximately
46 kDa in Fig.
6A is dependent on dimerization with
RXR. An extensive
dimerization interface between the two subunits most
likely accounts
for the ability of RXR to alter the protease
sensitivity of PPAR
in the absence of ligands for either receptor.
Finally, increased protection of RXR upon LG100268 binding may leave a
larger number of intact free RXR subunits available
for dimerization
with PPAR

and could provide an explanation for
the ability of
LG100268 to protect PPAR

. The possibility that
LG100268
significantly increased the quantity of RXR was addressed
by performing
a protease digestion experiment where RXR was
35S labeled
and PPAR

was unlabeled (Fig.
6E). Compared to PPAR

,
RXR is more
resistant to trypsin digestion. As shown in Fig.
6E,
under the
conditions used, LG100268 has only a small effect on
the digestion of
RXR (Fig.
6E, compare lane 3 with lane 4). The
results of the
experiment in Fig.
6E indicate that LG100268-dependent
protection of
PPAR

does not result from increased quantities
of RXR. Nevertheless,
treatment with higher trypsin concentrations
at elevated temperatures
allows detection of LG100268-dependent
changes in RXR protease
protection (data not shown). Taken together,
the results of Fig.
5 and
6 support the hypothesis that binding
of ligand to RXR promotes a
conformational change throughout the
heterodimeric complex, ultimately
influencing the conformation
and activity of PPAR

.
 |
DISCUSSION |
The ability of sequence-specific transcription factors to activate
transcription synergistically is a common property of genes transcribed
by RNA polymerase II (for reviews, see references 8, 22, 24,
26, and 52). The results of this work
describe a unique type of intermolecular transcriptional synergy. Two
structurally distinct ligands binding directly to nonequivalent
subunits of a single transcription factor, RXR-PPAR
heterodimers,
produce a level of transcription greater than the sum of individual
ligands alone. The observation that the combination of
receptor-specific ligands promotes the differentiation of 3T3 L1 cells
into adipocytes better than either ligand alone (Fig. 2) indicates that
synergy can also be detected when a hormonal response mediated by
endogenous RXR-PPAR
is examined. The abilities of ligands specific
to RXR and PPAR
to promote the differentiation of liposarcomas and
to increase the insulin sensitivity of diabetic animals indicate that
an understanding of synergistic transcription by RXR-PPAR
heterodimers will have important implications for human disease (46, 64).
The results of protein-protein interaction studies presented in this
work suggest two nonexclusive mechanisms for synergy by
receptor-specific ligands. First, we have observed that the individual
receptor subunits have different affinities for different cofactors.
For instance, compared to RXR, PPAR
has a stronger interaction with
CBP (Fig. 2 and 3), while compared to PPAR
, RXR has stronger
interactions with SRC-1 and the TATA binding protein (Fig. 2 and 3;
also data not shown). A similar observation has recently been made for
RXR-PPAR
heterodimers (17). Thus, synergistic activation
of transcription may occur by each subunit of the heterodimer
contacting different components of a common coactivator complex (CBP
physically interacts with SRC-1 [23, 28, 59, 74]) or
by each receptor recruiting different coactivator complexes. Increased
recruitment of coactivators is a common model for transcriptional
synergy (for reviews, see references 8, 22, 26, and
52).
A second mechanism for synergistic transactivation by RXR- and
PPAR
-specific ligands arises from the observation that synergy is
still detected when the RXR ligand-dependent activation function (
c/AF-2 domain) is inactivated. The results of two-hybrid analysis and protease protection experiments support the hypothesis that binding
of ligand to RXR can alter or influence the conformation of PPAR
.
The effect of this RXR-dependent conformational change in PPAR
manifests itself by increased recruitment of PPAR
's "preferred
coactivator" CBP. We consider CBP the preferred coactivator for
PPAR
based upon the results of the protein-protein interaction experiments of Fig. 2 and 3. The coactivator preference for PPAR
in
vivo, however, may also be influenced by factors such as response element sequence, promoter architecture, and coactivator concentration that are not accounted for by the assays used in this study.
Nevertheless, in all assays tested, the PPAR
-specific ligand
BRL49653 promotes stronger interactions between RXR-PPAR
heterodimers and CBP compared to SRC-1.
Although the combination of receptor-specific ligands promotes a
synergistic interaction with CBP in vivo, synergy is not observed in
the in vitro biochemical assays. Given that the level of synergy
observed in the transfection experiments is small (2.5- to 3-fold
greater than additive), the fixed-point in vitro assays may not have
the required sensitivity to detect subtle changes. For instance, the
gel shift assay requires a large excess of GST-CBP and a cross-linking
reagent to detect the RXR-PPAR
-CBP complex. Also, under the gel
shift conditions, the combination of receptor-specific ligands results
in an approximate twofold decrease in heterodimerization (56a) similar to that observed for RXR-vitamin D receptor
heterodimers (14). Any decrease in dimerization will have a
negative effect on the CBP interaction detected in the gel shift assay.
Nevertheless, the possibility that other trans-acting
factors absent from the in vitro systems are required for synergy
cannot be ruled out. It is noteworthy that CBP has been shown to
interact with other coactivators such as SRC-1 and p300/CBP-associated
factor (11, 28, 59, 65, 73, 74). CBP is also reported to be
a component of a RNA polymerase II holoenzyme complex (29, 47,
48). The observation that in vivo coactivators are components of
multimeric complexes that have enzymatic (acetyltransferase) activity
(4, 11, 33, 34, 49, 60) suggests it is unlikely that
synergistic transactivation observed in the transfection and two-hybrid
experiments is determined simply by the strength of protein-protein
interactions.
One possible trivial explanation for the ability of the two
receptor-specific ligands to synergize in the two-hybrid assay (Fig.
2A) is that the PPAR
-specific ligand BRL49653 promotes a direct
interaction between VP16-RXRLBD-PPAR
LBD heterodimers and CBP via the
PPAR
LBD. Addition of the RXR-specific ligand LG100268 could lead to
activation of the hormone-dependent activation function of RXR with
synergy resulting from the combination of the constitutive VP16
activation domain present in the fusion protein and the
ligand-dependent RXR activation function. We feel there are three
reasons why such an explanation is unlikely. First, synergy is observed
with full-length receptors on a typical hormone response element in the
absence of the VP16 activation domain (Fig. 1A). Second, if synergy
simply required two activation functions, one would expect to see
BRL49653 and LG100268 synergize in the two-hybrid assay when SRC-1 is
used as the bait. This result is not observed (Fig. 2D). Third, synergy
is still observed when the RXR
c/AF-2 domain is inactivated by
mutation (Fig. 5).
The recent crystal structures of the LBDs of RXR, RAR, and TR suggest
that ligand binding to receptors results in an almost 90° movement of
the
c/AF-2 domain from a position extended away from the rest of the
structure to a position loosely packed upon the LBD surface. This
conformational change is thought to allow receptors to achieve a
structure that promotes the release of corepressors and association of
coactivators (for reviews, see references 57 and
72). A key role for the
c/AF-2 domain in this
ligand-dependent conformational change is the observation that deletion
or mutation of this domain produces receptors that bind ligand but do
not activate transcription (3, 15, 55, 61). Not only does
inactivation of the
c/AF-2 domain block the interaction with
coactivators, but
c/AF-2 negative receptors also exhibit stronger
binding to corepressors and fail to release corepressors upon ligand
binding (9, 11, 12, 27, 28, 35, 50, 65, 68). The interaction
between PPAR
and the corepressors SMRT and NCoR is significantly
weaker than the well-characterized interactions between corepressors
and RAR or TR (76). Nevertheless, as observed with RAR and
TR, inactivation of the PPAR
c/AF-2 domain produces a
dominant-negative receptor that fails to release corepressors (Fig. 4
and data not shown). In contrast to nonpermissive RXR-RAR and -TR
heterodimers that always restrict RXR signaling, inactivation of the
PPAR
c/AF-2 domain changes the nature of RXR-PPAR
heterodimers
from permissive for RXR signaling to nonpermissive. Likewise, mutation
of the hinge region of RAR to decrease its affinity for corepressors
has the opposite effect, transforming nonpermissive RXR-RAR
heterodimers to permissive (35). The effect of corepressor
binding on RXR signaling suggests that one major determinant of the
permissive or nonpermissive nature of a particular RXR-dependent
heterodimer is the affinity of the heterodimer for corepressors.
Furthermore, this observation suggests that if other factors, such as
corepressor concentration, posttranslational modifications, or response
element sequence, can influence heterodimer-corepressor interactions
(76), then the permissive or nonpermissive nature of a
particular RXR-dependent heterodimer may be tissue and/or promoter
specific. Nevertheless, the possibility that mutation of the PPAR
c/AF-2 domain inhibits RXR activity by a mechanism that does not
require corepressor function cannot be ruled out. Preliminary protease
protection experiments, however, have failed to detect an effect of the
PPAR
c/AF-2 domain on LG100268-dependent conformational change of
RXR (data not shown).
In contrast to PPAR
, point mutations that inactivate the RXR
c/AF-2 domain have little or no effect on the ability of PPAR
to
respond to ligand (Fig. 3 and 5). Not surprisingly, RXR has little or
no interaction with corepressors (12, 13, 27). Strikingly,
however, inactivation of the RXR
c/AF-2 domain does not eliminate
the ability of the RXR-specific ligand LG100268 to synergize with the
PPAR
-specific ligand BRL49653. The absence of a requirement for the
RXR activation function in transcriptional synergy suggests that
binding of ligand to RXR induces a conformational change throughout the
heterodimer that facilitates transactivation by PPAR
. For RXR,
therefore, the transactivation function of the
c/AF-2 domain is not
required for ligand to induce a conformational change. The possibility
that when dimerized with PPAR
, a novel ligand-dependent activation
surface on RXR is utilized cannot be ruled out. Nevertheless, the
ability of LG100268 binding to RXR to alter the protease sensitivity of
PPAR
in vitro supports the conclusion that ligand binding to RXR can
alter the conformation and activity of PPAR
. The conclusion that RXR
can modulate the activity of its dimerization partner is not
unprecedented. We have recently described a novel RXR-specific ligand,
LG100754, that activates RXR-RAR heterodimers independently of the RXR
c/AF-2 domain (36, 56). Similarly, Willy and Mangelsdorf
(71) have shown that transactivation by RXR-LXR heterodimers
in response to RXR agonists does not require the RXR
c/AF-2 domain.
Finally, Wiebel and Gustafsson (70) have determined that the
constitutive activity of the orphan receptor OR1 requires dimerization
with RXR but is independent of the RXR
c/AF-2 domain. From these
results, it appears likely that ligand binding to RXR results in
conformational changes that are propagated through the dimer interface
(helices 9 and 10) to the partner. The ability of RXR to significantly modulate the activity of its dimerization partner not only has important implications for the treatment of diabetes and other human
disease but also indicates that heterodimers must be considered single
functional entities that are greater than the sum of their parts.
 |
ACKNOWLEDGMENTS |
We thank M. Manchester and D. Chakravarti for comments on the
manuscript; C. Glass (UCSD) and B. W. O'Malley (Baylor College of
Medicine) for providing clones for CBP and SRC-1; and D. J. Peet,
D. F. Doyle, D. R. Corey, and D. J. Mangelsdorf (Howard Hughes Medical Institute, UT Southwestern) for providing the RXR L436S
mutant. We also thank M. Boehm and L. Hamann for providing LG100268 and
BRL49653 and R. Cesario for help with 3T3 L1 cells.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Department of
Retinoid Research, Ligand Pharmaceuticals, 10255 Science Center Dr., San Diego, CA 92121. Phone: (619) 550-7214. Fax: (619) 550-7730. E-mail: ischulman{at}ligand.com.
 |
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