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Mol Cell Biol, July 1998, p. 4347-4357, Vol. 18, No. 7
Institute for Human Gene
Therapy1 and
Department of Animal
Biology School of Veterinary Medicine,3
University of Pennsylvania, Philadelphia, Pennsylvania 19104, and
Howard Hughes Medical Institute2 and
Departments of Medicine and of Molecular Genetics and Cell
Biology,4 The University of Chicago, Chicago,
Illinois 60637
Received 15 January 1998/Returned for modification 28 February
1998/Accepted 23 March 1998
0270-7306/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
Normal Myeloid Development Requires Both the
Glutamine-Rich Transactivation Domain and the PEST Region of
Transcription Factor PU.1 but Not the Potent Acidic
Transactivation Domain

SUMMARY
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
ACKNOWLEDGMENTS
REFERENCES
SUMMARY
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Gene targeting of transcription factor PU.1 results in an early
block to fetal hematopoiesis, with no detectable lymphoid or myeloid
cells produced in mouse embryos. Furthermore,
PU.1
/
embryonic stem (ES) cells fail to
differentiate into Mac-1+ and F4/80+
macrophages in vitro. We have previously shown that a PU.1 transgene under the control of its own promoter restores the ability of PU.1
/
ES cells to differentiate into
macrophages. In this study, we take advantage of our
PU.1
/
ES cell rescue system to genetically
test which previously identified PU.1 functional domains are necessary
for the development of mature macrophages. PU.1 functional domains
include multiple N-terminal acidic and glutamine-rich transactivation
domains, a PEST domain, several serine phosphorylation sites, and a
C-terminal Ets DNA binding domain, all delineated and characterized by
using standard biochemical and transactivational assays. By using the
production of mature macrophages as a functional readout in our assay
system, we have established that the glutamine-rich transactivation
domain, a portion of the PEST domain, and the DNA binding domain are
required for myelopoiesis. Deletion of three acidic domains, which
exhibit potent transactivation potential in vitro, had no effect on the ability of PU.1 to promote macrophage development. Furthermore, mutagenesis of four independent sites of serine phosphorylation also
had no effect on myelopoiesis. Collectively, our results indicate that
PU.1 interacts with important regulatory proteins during macrophage
development via the glutamine-rich and PEST domains. The
PU.1
/
ES cell rescue system represents a
powerful, in vitro strategy to functionally map domains of PU.1
essential for normal hematopoiesis and the generation of mature
macrophages.
INTRODUCTION
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Hematopoiesis is a dynamic developmental process that ensures a sufficient supply of terminally differentiated blood cell types essential for survival. Mature blood cells include erythrocytes, megakaryocytes, monocytes, granulocytes and lymphocytes, derived from a population of pluripotent hematopoietic stem cells. Regulation of this process is controlled by an array of extracellular and intracellular signals acting in the context of a multicellular microenvironment. Transcription factors are crucial intracellular signals regulating hematopoietic development by initiating and modulating gene expression required for growth and differentiation. The Ets transcription factor PU.1 (Spi-1) is specifically expressed in hematopoietic organs, with the highest levels detected in lymphoid and myeloid cells (11, 15). We have previously shown that mutagenesis of PU.1 results in a cell-intrinsic block to the development of B cells, T cells, macrophages, and neutrophils in the yolk sac and fetal liver without affecting the generation of erythrocytes or megakaryocytes (29, 43, 44). The primary target appears to be a multipotential lymphoid-myeloid progenitor population, since such cells are significantly reduced in PU.1 mutant fetal livers and do not differentiate into B cells or macrophages in vitro (43). These results suggest that PU.1-dependent genes are involved either in the production of lymphoid-myeloid progenitors from hematopoietic stem cells or in the proliferative and differentiative potential of such progenitors.
The embryonic lethal nature of the PU.1 mutation has made further analysis of PU.1 function during hematopoietic development difficult to study. The ability of embryonic stem (ES) cells to differentiate in culture offers an attractive in vitro system to further understand the function of PU.1 (reviewed in reference 46). In the absence of leukemia-inhibitory factor and stromal cell contact, ES cells form embryoid bodies and differentiate into hematopoietic cells including erythrocytes, granulocytes, macrophages, mast cells, and megakaryocytes (3, 6, 17, 41, 47). The differentiation program of ES cells is thought to resemble that which occurs during yolk sac and fetal liver hematopoiesis.
The ability of PU.1 to promote expression of lymphoid and myeloid genes
has prompted several groups to define the functional domains of PU.1 by
using both nonhematopoietic and B-cell lines. Multiple transactivation
domains in the N terminus (amino acids 7 to 100) of the protein have
been identified (12, 20, 23, 45). Three domains are rich in
acidic amino acids (amino acids 7 to 32, 33 to 55, and 56 to 74), while
a fourth is glutamine rich (amino acids 75 to 100). One of the acidic
activation domains contains two serine phosphorylation sites (amino
acids 41 and 45) determined to be necessary for macrophage
colony-stimulating factor (M-CSF)-dependent proliferation of bone
marrow macrophages (4). Downstream of the transactivation
region is the PEST domain of PU.1 (amino acids 118 to 160), which is
rich in proline (P), glutamic acid (E), serine (S), and threonine (T)
residues. PEST domains are thought to be involved in controlling
protein stability (38) and can target proteins for
proteolytic degradation (36). The PEST region is not
required for transactivation as measured by transient transfection
assays in tumor-derived cell lines (9, 12, 20, 23). However,
a phosphorylation site at serine 148 in the PEST domain mediates the
interaction between PU.1 and the PU.1-interacting partner (Pip) in
vitro (32, 33). Pip, a member of the interferon stimulatory
family of transcription factors, is expressed predominantly in lymphoid
cells (8, 25, 49). The PU.1-Pip interaction is required for
optimal transactivation of 3' enhancer regulatory elements located in
the kappa and lambda immunoglobulin light-chain genes in
nonhematopoietic cell lines (8, 33). Reduced serum
immunoglobulin levels and impaired humoral responses in Pip-deficient
mice confirm that both PU.1 and Pip are critical for B cell function in
vivo (26). DNA binding activity resides in the 85-amino-acid
Ets domain located in the carboxy terminus of PU.1 (16, 19).
Recently, a second transcription factor, NF-IL6
(C/EBP
[CAAT
enhancer binding protein]), has been shown to interact directly with
PU.1 and synergistically activate transcription (28). The
interaction site for NF-IL6
maps to the C-terminal 28 amino acids of
PU.1.
We and others have demonstrated that PU.1
/
ES cells fail to differentiate into macrophages in vitro (13,
29). The failure of PU.1
/
ES cells to
differentiate into macrophages is complemented by a PU.1 transgene
under the control of its own promoter (29), proving that
PU.1 promotes macrophage differentiation from totipotent ES cells. We
now exploit this in vitro differentiation system to examine a series of
mutant PU.1 transgenes and assess which previously identified
functional domains of PU.1 are necessary for myeloid differentiation.
Our study represents the first time that a protein has been
functionally dissected in the context of normal differentiating ES
cells. The PU.1
/
ES cell in vitro
differentiation experimental system is unique for the following two
reasons: (i) we have not used a virally transformed cell line derived
from ES cells, thus eliminating the unknown effects of the transforming
agent on the differentiative program under study (46); and
(ii) expression of the mutant PU.1 transgenes was placed under the
control of the endogenous PU.1 promoter without the addition of
heterologous regulatory regions (2). The goal is that such
transgenes will be expressed similarly to the endogenous
PU.1 gene. The importance of proper PU.1 expression is
highlighted by studies that have demonstrated that expression of PU.1
outside the hematopoietic system or abnormally high levels of
ectopically expressed PU.1 within the hematopoietic system can result
in apoptosis (42, 48).
Our results show that a subregion of the PEST domain is required for the differentiation of Mac-1+ and F4/80+ macrophages from ES cells. This does not involve the previously identified serine 148 residue which is important for controlling gene expression in the B-cell lineage. In addition, the glutamine-rich transactivation region was essential for myelopoiesis. The DNA binding domain alone was incapable of promoting macrophage development. Surprisingly, none of the acidic transactivation regions had a role in myeloid development. Our inability to demonstrate the necessity of the acidic transactivation domains suggests a possible specialized role for such domains in controlling genes not involved in myeloid development. Identifying both the PEST and glutamine-rich regions as being functionally important allows us to present a working model of how PU.1 is able to regulate genes that are critical for myeloid development via protein-protein interactions with these domains.
MATERIALS AND METHODS
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In vitro transcription and translation. All mutants in the context of plasmid pBluescript KS+ were transcribed with T3 polymerase and translated with a rabbit reticulocyte lysate (Promega) in the presence of [35S]methionine according to the manufacturer's specifications. Translation products were subjected to electrophoresis on sodium dodecyl sulfate (SDS)-polyacrylamide gels (PAGE) and visualized by autoradiography.
Metabolic labeling and immunoprecipitation experiments.
A
modification of the method of Luscher and Eisenman (23a) was
used. NIH 3T3 cells were transfected by the calcium phosphate coprecipitation method (11b) with plasmids expressing PU.1
or derivatives. After 24 h, cells were incubated for 2 h with
0.2 mCi of 35S-labeling mix (NEN
Expre[35S][35S]) per ml. Cells were
harvested in 20 mM Tris-HCl (pH 7.5)-50 mM NaCl-0.5% SDS-0.5%
deoxycholate-1 mM dithiothreitol-leupeptin (10 µg/ml)-N
-p-tosyl-L-arginine methyl
ester (TAME) (10 µg/ml)-pepstatin (1 µg/ml)-1 mM
phenylmethylsulfonyl fluoride, sonicated, and centrifuged. Samples were
immunoprecipitated with anti-PU.1 antibodies (Santa Cruz Biotechnology)
and resolved by SDS-PAGE.
CAT assays. Transient expression assays were performed by the calcium phosphate coprecipitation method of Graham and van der Eb (11b). Cell lysates were prepared and chloramphenicol acetyltransferase (CAT) assays were performed as described by Gorman et al. (11a).
Generation of the PURI cassette. With the exception of the serine 148 mutant, PU.1 mutant cDNAs were subcloned as EcoRI fragments into the PURI expression vector (see Fig. 2A). A previously described PU.1 transgene called Putrans (29) containing exon 1 of PU.1, 6 kb of 5' flanking sequences, and the human growth hormone (hGH) polyadenylation region was modified as follows. The EcoRI site located at the 5' boundary of the 5' flanking region was eliminated by a Klenow fill-in reaction, leaving a unique EcoRI site at the 3' end of the PU.1 cDNA. A novel EcoRI site was engineered into the proximal 5' flanking region (+95 to +100) (27) by site-directed mutagenesis using the Sculpture in vitro mutagenesis system (Amersham International, Buckinghamshire, England) according to the manufacturer's instructions. Briefly, mutagenesis reactions were initiated by using a single-stranded DNA template isolated from a PU.1 M13mp19 recombinant along with a mutant primer containing a novel EcoRI site (5'-GGG TCC GCCTgaAtTCCC ACC GAA GCA CC-3') (the EcoRI recognition site is underlined; lowercase letters indicate mutations). This PU.1 M13 clone was prepared by subcloning a 3.0-kb XbaI fragment containing the PU.1 cDNA, hGH polyadenylation region, and proximal 5' flanking region. The resulting mutagenized XbaI fragment was inserted into a partially XbaI digested Putrans to generate the PURI cassette, which was characterized by restriction enzyme and DNA sequence analyses.
PU.1 mutant transgenes.
PU.1 cDNA deletions were constructed
via PCR amplification using Pfu DNA polymerase (Stratagene)
or AmpliTaq DNA polymerase (Perkin-Elmer/Cetus) and the wild-type PU.1
cDNA fragment as a template (19). The N-terminal
transactivation deletion
2-30 or deletion
2-167, containing the
DNA binding domain alone, was generated with the appropriate primer
pairs listed in Table 1. PU.1 internal
deletions removing transactivation domains (
3-21,
33-74, and
75-100) or portions of the PEST domain (
141,
118-167,
118-132, and
141-167) were produced by using a pair of internal primers listed in Table 1 along with a set of external primers. Transactivation mutant
33-100 was constructed as previously
described (32). Transactivation mutant
33-100,
NF-IL6
/C/EBP
binding mutant (
245-272), and serine
phosphorylation mutants (S148A and S41/45) were created as previously
discussed (32, 33). The integrity of each PU.1 mutant
construct was confirmed by DNA sequence analysis, and all deletion
mutations were subcloned as full-length clones into the R1 site of the
PURI cassette.
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ES cells (29). ES cell
stable transformants underwent puromycin selection (2 µg/ml) for 7 to
10 days.
Analysis of ES cell clones.
Southern blot analysis of
EcoRI-digested genomic DNA isolated from Purr
clones was performed with a PU.1 cDNA probe (19). ES cell
clones were differentiated in vitro for 11 days in 0.9%
methylcellulose medium containing 10% fetal bovine serum (HyClone),
human interleukin-1
(IL-1
; 7.5 × 102 U/ml),
murine stem cell factor (SCF; 10 ng/ml), murine granulocyte-macrophage colony-stimulating factor (GM-CSF; 0.5 ng/ml), murine IL-3 (5 ng/ml),
human erythropoietin (EPO; 2 U/ml; Amgen, Thousand Oaks, Calif.), and
4.5 × 10
4 M
-monothiaglycerol (29).
The IL-1
, SCF, GM-CSF, and IL-3 were a gift of Genetics Institute
(Boston, Mass.). At day 11, embryoid bodies (EBs) were picked and
erythrocytes, macrophages, neutrophils, and early megakaryocytes were
identified by cytospin preparations stained with May-Grunwald-Giemsa
(MGG) stain.
33-74 RNA samples.
RESULTS
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Strategy to identify PU.1 functional domains.
We had
previously observed that PU.1
/
ES cells are
incapable of differentiating into macrophages in vitro. However,
macrophage production is restored in the
PU.1
/
ES cells upon introduction of a PU.1
cDNA expression construct controlled by approximately 6 kb of 5'
flanking region from the PU.1 gene (29).
Interestingly, the 6-kb native promoter was the only promoter that
rescued myeloid development. The 6-kb promoter restored expression of
PU.1 mRNA to wild-type levels in an appropriate temporal fashion during
in vitro differentiation. The wild-type PURI expression cassette (see
Fig. 2) rescues myeloid development as well as a 100-kb P1 clone
containing the entire PU.1 locus, suggesting that cDNA expression is
regulated similarly to the native locus (data not shown). In contrast,
approximately 1 kb of promoter was insufficient for high levels of PU.1
expression (data not shown). Furthermore, multiple heterologous
promoters expressing the PU.1 cDNA failed to promote myeloid
development and were actually deleterious to the
PU.1
/
ES cells. The generation of
macrophages from totipotent, undifferentiated ES cells is monitored by
the expression of gene products associated with terminal myeloid
differentiation, including CD11b, F4/80, and M-CSFR. To further
our understanding of how PU.1 may be involved in committing cells to
the myeloid lineage, we sought to identify which previously defined
functional domains of PU.1 are required to promote the differentiation
of ES cells along the myeloid pathway.
118-167 deletion mutant, which is lacking
the entire PEST domain, shows protein stability characteristics similar
to those of wild-type PU.1 protein (Fig. 1B, lane 6). Where
appropriate, mutants were also tested for the ability to activate
expression of a PU.1-dependent CAT reporter construct. Figure 1C
illustrates the ability of
118-167 to activate transcription in this
assay. In all cases, the mutants used in this study expressed stable
proteins and displayed functional properties that were consistent with
the mutation.
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/
ES cells were
initially generated by sequential gene targeting of each allele of the
murine PU.1 locus (29). Since
PU.1
/
ES cells are
G418r/Hygr, a cDNA encoding Purr
was incorporated into PURI to select for ES transfectants (Fig. 2A).
Expression plasmids encoding PU.1 deletion mutants were transfected into PU.1
/
ES cells, and stable integrants
were selected for Purr. For each mutation, 24 clones were
isolated, expanded, and analyzed for integrity and copy number of the
inserted transgenes. The Southern blot in Fig. 2B shows a
characteristic hybridization pattern for Purr
PU.1
/
ES clones stably transfected with the
PU.1 expression vector. RNA was isolated from ES cell transfectants
differentiated in vitro for 11 days in methylcellulose cultures
containing the cytokines EPO, SCF, GM-CSF, IL-1
, and IL-3. RT-PCR
was used to detect the relative level of PURI transgene expression
(Fig. 2C). As expected, the size of the PCR products varied depending
on the extent of the deleted region. Due to the small proportion (20 to
30% on average) of macrophages in our day 11 methylcellulose cultures and the great difficulty of detecting PU.1 protein levels in normal cells using either in situ immunohistochemistry or Western blotting with the available anti-PU.1 immunological reagents, we relied on
RT-PCR to demonstrate that ES cell transfectants containing mutant PU.1
transgenes were being expressed at wild-type levels. For each mutant
PU.1 transgene, four ES clones expressing wild-type levels were
selected for further study (15, 43).
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EBs and EBs produced from various
rescued ES clones were scored for the presence of macrophages.
Successful rescue of macrophage differentiation was defined by cell
morphology following MGG staining and immunohistochemical detection of
Mac-1 and F4/80 surface expression (Fig.
3, 4, and
5). Mac-1 (CD11b), an integrin cell
surface protein, is expressed by both mature macrophages and
granulocytes, and its expression increases during myeloid
differentiation (39). F4/80, a member of the
seven-transmembrane region family of cell surface molecules, is
expressed specifically on macrophages (1). Further evidence
of successful macrophage development was the expression of M-CSFR RNA
as measured by RT-PCR analysis. M-CSFR is a myeloid lineage-specific
marker and may be involved in committing granulomonocytic progenitors
into monocytes (30). Wild-type EBs produced abundant
macrophages, whereas PU.1
/
EBs did not (Fig.
3A and C; Fig. 4A to D). PU.1
/
ES cells that
carried the wild-type PU.1 cDNA transgene rescued macrophage
development (Fig. 3E, 4E, and 4F). Unlike
PU.1
/
EBs, the rescued EBs also expressed
the M-CSFR based on RT-PCR analysis (data not shown). Importantly, each
independent PU.1
/
ES clone harboring a PU.1
cDNA transgene analyzed differentiated into macrophages in vitro.
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/
ES cells do not produce functional
macrophages upon differentiation (Fig. 3C and D). Introduction of the
wild-type PU.1 transgene, however, rescues the ability of
PU.1
/
ES cells to produce cells with the
morphology of mature macrophages capable of phagocytosis (Fig. 3E and
F). Therefore, our rescue system is capable of assaying the ability of
mutant PU.1 transgenes to support the development of mature macrophages
from totipotent ES cells.
The Ets domain alone is insufficient for macrophage
differentiation.
PU.1 binds to DNA via its carboxy-terminal Ets
domain. Since this domain is crucial for DNA binding, one would expect
the Ets domain to be required for macrophage differentiation. It was recently reported that the DNA binding domain of the GATA-1
transcription factor alone is sufficient to alleviate the block
in terminal differentiation of the GATA-1
G1E
erythroblastic cell line (46). To determine if a similar situation holds true for PU.1, we tested a PU.1 cDNA mutant which encodes the DNA binding domain but not the transactivation and PEST
domains (
2-167).
2-167
failed to restore terminal macrophage development to
PU.1
/
cells. None of the
2-167 ES clones
were able to produce CD11b+ or F4/80+ cells or
cells with macrophage morphology, based on MGG staining. Therefore, the
DNA binding domain of PU.1 alone is not sufficient to generate myeloid
differentiation. This finding suggests that additional domains of PU.1
are required to work in conjunction with the Ets DNA binding domain to
promote macrophage differentiation.
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245-272) that deletes the
NF-IL6
/C/EBP
binding site (28) and carboxyl 10 amino
acids of the Ets DNA binding domain (extending from residues 168 to
255) was examined. The
245-272 PU.1 protein also fails to bind DNA as assayed by EMSA (32). Interaction of PU.1 and C/EBP
family members is thought to play a critical role in the expression of multiple myeloid genes (reviewed in reference 10).
Surprisingly, the
245-272 mutant was capable of supporting
macrophage differentiation by all criteria examined, including the
production of CD11b+, F4/80+, and
MGG+ cells (Fig. 5C and 6). These results suggest that
245-272 is still capable of interacting with other proteins in vivo
to promote myeloid gene expression. It is possible that this mutant is
capable of independently binding DNA in vivo under conditions that are not mimicked during in vitro EMSA. Alternatively, PU.1 is recruited to
myeloid promoters in vivo by protein-protein interactions involving factors other than C/EBP family members. Previously, we showed that the
immunoglobulin kappa enhancer can be activated in NIH 3T3 cells by
cotransfection with PU.1, Pip, c-Fos, and c-Jun (35). Pip,
c-Fos, and c-Jun support a low level of enhancer activity which is
greatly stimulated by the addition of PU.1. This stimulation requires
both the DNA binding and transactivation domains of PU.1. We tested the
ability of our
245-272 deletion to transactivate a 3'
enhancer-dependent reporter plasmid in NIH 3T3 cells (Fig. 1D). A
wild-type PU.1 transfection served as our positive control, and a
construct expressing just the Ets domain (
1-160) was our negative
control for PU.1 transactivation. The
245-272 mutant was unable to
activate transcription of the immunoglobulin kappa 3' enhancer.
However, the rescue of myeloid differentiation is unaffected by the
245-272 truncation. It seems possible that these results reflect a
difference between the regulation of lymphoid and myeloid genes by
PU.1. ES cells expressing
245-272 activate M-CSFR, CD11b, and F4/80
gene expression. In contrast to
245-272, a
232-272 mutant protein
failed to produce macrophages when introduced into
PU.1
/
ES cells (Fig. 6). Therefore, more
than 64 amino acids of the 85-amino-acid Ets region are essential for
myelopoiesis.
Role of the PEST domain of PU.1 in macrophage differentiation. The central portion of PU.1 (amino acids 118 to 167) contains a high content of proline, glutamic acid, serine, and threonine. As described earlier, the PU.1 PEST domain is known to function in B cells to recruit a second binding protein, Pip, to DNA. This recruitment requires phosphorylation of serine 148 within the PU.1 PEST domain (33). Macrophages, however, do not express Pip (7, 25, 49). Therefore, the PU.1 PEST domain cannot function via Pip recruitment in the macrophage lineage. Thus, it is possible that the entire PEST domain is dispensable for macrophage differentiation. This would be consistent with the observation that transactivation of PU.1-dependent reporter constructs does not require the PEST domain (9, 12, 20, 23). Alternatively, the PEST domain could be required for myeloid-specific protein-protein interactions.
To test these alternatives, a mutant expression construct lacking the entire PU.1 PEST domain (
118-167) was assayed in
PU.1
/
ES cells. Interestingly,
118-167
failed to rescue macrophage differentiation (Fig.
7). Although PEST sequences have
been implicated in targeting proteins for degradation (38),
deletion of amino acids 118 to 167 did not increase PU.1 stability
(Fig. 1B and C). These data demonstrate a necessary role for the PU.1
PEST domain during macrophage development and suggest that one or more myeloid proteins may interact with PU.1 in this region.
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118-167 mutant construct, mutation of serine
148 to alanine had no effect on macrophage differentiation (Fig. 7,
S148A). To better define the PEST sequences necessary for macrophage
differentiation, three deletions (
118-132,
129-141, and
141-167) that collectively span the PEST domain were assayed. Deletions of amino acids 118 to 132 and 141 to 167 had no effect on
macrophage differentiation, whereas deletion of residues 129 to 141 yielded a mutant PU.1 protein incapable of supporting differentiation, as evidenced by absence of CD11b+ and F4/80+
cells and no expression of M-CSFR RNA (Fig. 7 and
8). The only known functional motifs of
this PU.1 sequence are serine phosphorylation sites at residues 132 and
133 (33). Since serine 132 was deleted in the
118-132
mutant that promoted myelopoiesis, it cannot be a required residue.
Furthermore, the overlapping nature of our PEST deletions narrows the
required residues to an eight-amino-acid region from 133 to 140 that is
highly acidic. Of the eight residues, four are glutamic acid, one is
aspartic acid, and one is glutamine. It will be of interest in the
future to determine whether phosphorylation of serine 133 or the acidic
nature of these residues is necessary for macrophage differentiation.
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141). This mutation is known to recruit Pip to
DNA more efficiently than wild-type PU.1 (31). Interestingly, based on the production of CD11b+,
F4/80+, and MGG+ cells, this mutation was more
efficient at inducing macrophage differentiation than the wild-type
PU.1 protein (Fig. 4I, 4J, and 5D). The reason for this increased
capacity for differentiation is presently unclear.
Only the glutamine-rich region of the PU.1 transactivation domain is required for normal macrophage differentiation. The work of Klemsz and Maki (20) showed that the PU.1 transactivation domain encompasses residues 7 to 100. Residues 7 to 30 are moderately acidic, while 33 to 54 and 55 to 74 are highly acidic and exhibit potent transactivation potential in HeLa cells (20). The glutamine-rich region (amino acids 75 to 100) has transactivation activity in both HeLa cells and the lymphoid S194 cell line (20, 45). However, deletion of the glutamine-rich domain results in a modest effect on transactivation by PU.1, while the highly acidic residues of amino acids 33 to 74 are strictly required (20).
We tested whether the N terminus of PU.1 is necessary for myeloid maturation. Truncation of the first 20 amino acid residues results in a decrease in the ability of PU.1 to transactivate reporter genes in HeLa cells (20). Surprisingly, PU.1 proteins lacking the first 20 (
3-21) or 30 (
2-30) amino acids rescued macrophage development to
the same extent as the wild-type protein (Fig. 4K, 4L, 5E, and
9). Both mutants promoted myeloid
differentiation by all criteria examined, including the production of
CD11b+ and F4/80+ cells and the characteristic
macrophage morphology following MGG staining.
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33-100)
abolished rescue (Fig. 9). In contrast to the in vitro transactivation data, we found that deletion of the two acidic regions from residues 33 to 74 had no effect on macrophage differentiation (Fig. 9,
33-74).
Instead, deletion of the glutamine-rich domain abolished the ability of
these mutant ES cells to differentiate into macrophages (Fig. 9,
75-100). The
75-100 PU.1 protein was capable of recruiting Pip to
DNA and stimulating expression of a reporter construct in transient
transfection assays (data not shown). The data presented above indicate
that a large portion of the PU.1 protein defined as necessary for
transcriptional activation by transient expression assays is
dispensable for macrophage differentiation. Only the glutamine-rich
sequence from 75 to 100 in the PU.1 transactivation domain is required
to support macrophage development.
Two in vivo-phosphorylated serine residues (41 and 45) within the PU.1
activation domain have been implicated in the M-CSF-dependent proliferation of murine bone marrow macrophages (4). These residues are within the dispensable region identified above. We tested
whether mutation of these serines to alanines would affect macrophage
rescue. As expected, this mutant supported macrophage differentiation,
indicating that serine residues 41 and 45 are not critical (Fig. 9).
In summary, our results indicate that at least three segments of PU.1
are necessary for macrophage differentiation. Functional PU.1 regions
include amino acids 75 to 100, 133 to 140, and 232 to 245, which lie
within the activation, PEST, and DNA binding domains, respectively.
Surprisingly, each of these functionally important segments is much
smaller than the functional domains identified by either transient
transfection or biochemical assays. Large segments of each PU.1 domain
can be deleted with no adverse consequences for differentiation of the
macrophage lineage in vitro. The significance of these observations is
discussed below.
DISCUSSION
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ES cell in vitro differentiation offers a useful experimental
model to address the role of transcription factors during fetal hematopoiesis. This strategy is of particular use for knockout mice
that contain a prenatal lethal mutation as is the case for the Ets
family transcription factor PU.1 (44). Our previous studies
have shown that deleting the entire DNA recognition domain (amino acids
200 to 272) of the PU.1 gene by homologous recombination blocks normal macrophage development in the fetal liver and yolk sac in
vivo and from in vitro-differentiated ES cells (29, 44). Expression of a wild-type PU.1 cDNA transgene rescues the ability of
totipotent PU.1
/
ES cells to differentiate
into Mac-1+ and F4/80+ macrophages. Here we
have reengineered our PU.1 cDNA expression vector to express a panel of
mutant transgenes under the control of the endogenous PU.1 promoter.
This body of work represents the first study that has systematically
characterized the functional domains of a transcription factor required
for normal myeloid development from ES cells. By monitoring the
generation of mature macrophages in vitro, we have been able to
identify multiple domains of PU.1 that are required to complete the
myeloid differentiation program.
The DNA binding domain alone does not rescue myeloid
development.
A limited set of N-terminal and C-terminal PU.1
deletions were analyzed by gel electrophoresis DNA binding assays to
localize amino acids required for DNA binding to residues 170 to 269 (19, 32). Recent X-ray crystallographic analyses of the PU.1
DNA binding domain spanning amino acids 171 to 258 have determined that
PU.1 binds its recognition binding site(s) via a winged
helix-turn-helix structure (21). Studies of the µ70
enhancer from the immunoglobulin heavy-chain gene showed that the DNA
binding domain of PU.1 is sufficient to promote enhancer activity in
vitro (9). Likewise, the DNA binding and PEST domains of
PU.1 are sufficient to transactivate the kappa light-chain
immunoglobulin 3' core region (32). Both of these studies
utilized transient transfection assays for their readout of PU.1
activity. Using an immortalized GATA-1
proerythroblastic cell line, Weiss et al. demonstrated that the zinc
finger DNA binding domain alone of transcription factor GATA-1 promotes
erythroid maturation in vitro (46). In contrast, PU.1 mutant
2-167 failed to rescue macrophage differentiation in mutant ES
cells, implying that PU.1 functions in a fundamentally different manner
from GATA-1. Furthermore, our results do not correlate with the study
of PU.1 function at the B-cell µ70 enhancer. This discrepancy may
reflect an intrinsic difference between the mechanisms of how PU.1
modulates gene expression in the lymphoid lineage versus the myeloid
lineage. The majority of PU.1 binding sites for the myeloid lineage are
TATA-less promoter regions containing Sp1 binding sites. In the
lymphoid lineage, the majority of the binding sites are in enhancer
regions that assemble multiprotein higher-order complexes (reviewed in
reference 10). The PU.1 DNA binding domain is
required for myeloid development, as demonstrated by the lack of rescue
by the
232-272 mutant. Therefore, the DNA binding domain is
necessary but not sufficient for myeloid development.
/C/EBP
. C/EBP
is a
member of the leucine zipper family of transcription factors and is
induced during inflammation (18). C/EBP binding sites are
found adjacent to PU.1 binding sites in many myeloid promoters, and
PU.1 and C/EBP family members function together to promote gene
expression (10). Deletion of amino acids 245 to 272 prevents
this interaction in vitro and blocks DNA binding in EMSA studies
(35), consistent with loss of the wing structure formed
between
strands 3 and 4 which interacts with the mirror groove of
DNA. Surprisingly, when
245-272 was expressed in
PU.1
/
ES cells, macrophage development was
restored. The discrepancies between the in vivo rescue and the EMSA
results are unclear but may point to a PU.1-protein interaction (other
than C/EBP
) in vivo that stabilizes the binding of the
245-272
PU.1 mutant to target binding sites. The DNA recognition motif as
determined from X-ray crystallographic analysis of one PU.1 Ets
domain-DNA complex in vitro may not reflect the requirements of the
full-length PU.1 protein binding target sites in vivo. However,
transient transfection assays with
245-272 failed to demonstrate DNA
binding and transactivation in NIH 3T3 cells (Fig. 1D). Collectively, these results suggest that PU.1-promoter sequence interactions occur
that are specific to myeloid cells.
A subregion of the PEST domain is required for myelopoiesis.
Amino acids 118 to 167 encode the PEST domain of PU.1. Klemsz and Maki
(20) demonstrated that the PEST domain is not required for
transactivation during transient transfection assays in HeLa cells.
This observation was confirmed in studies using an IL-1
promoter-dependent reporter system or GAL4-PU.1 derivatives tested in
nonhematopoietic cells (12, 23). When the entire PEST domain was deleted from PU.1 (
118-167), no macrophage development was observed. To determine which residues were important for rescue of
differentiation, subdomains of the PEST domain were deleted. Overlapping deletions defined a highly acidic eight-amino-acid region
from 133 to 140 required for myelopoiesis. How this region functions is
uncertain, but it probably is involved in protein-protein interactions.
A novel
141 mutation that deletes a glutamine in the PEST region has
been determined to increase Pip recruitment by PU.1 in vitro
(31). The
141 protein was able to increase the number of
CD11b+ and F4/80+ macrophages. These
observations suggest that deletion of glutamine 141 may increase the
affinity of PU.1 for its DNA recognition element and/or its
myeloid-specific partner and that the acidic PEST subdomain is the site
of interaction. Whether this interaction requires phosphorylation of
serine 133 remains to be determined. Currently, we have no data to
suggest that phosphorylation of PU.1 plays a role in myeloid
development, but phosphorylation of serine 133 and interaction with a
myeloid cofactor remain an attractive model for future analyses.
The glutamine-rich domain, unlike the acidic domain, is required
for macrophage differentiation.
Removal of both previously
described acidic and glutamine rich transactivation domains
(12, 20, 23, 45) (
33-100) resulted in the complete
absence of Mac-1+ and F4/80+ macrophages. In
contrast, deletion of an additional putative activation domain
encompassing the N-terminal 30 amino acids (
2-30) had no effect on
myeloid development. Klemsz and Maki (20) showed that
removal of the N-terminal 20 amino acids from PU.1 resulted in a
4.5-fold drop in transactivation of a reporter gene following transient
transfection into PU.1-deficient HeLa cells. The presence of an
N-terminal transactivation domain was confirmed by Kominato et al.
(23), using an IL-
promoter-dependent reporter gene in
phorbol myristic acid-activated HeLa cells. In their experimental system, they lost approximately half of the transcriptional activity by
deleting amino acids 8 through 32 from PU.1. Early studies of the yeast
transcription factors GCN4 and GAL4 first identified acidic regions as
being responsible for transactivation (14, 24). Similar
acidic transactivation domains were later identified in the herpes
simplex virus VP16 (40). It has been proposed that acidic
activating regions are able to contact one or more of the following
proteins: TATA binding protein (TBP), TBP-associated factors (TAFs),
TFIIB, and TFIIH (reviewed in reference 37). This
leads to the assembly of the transactivational initiation complex
consisting of TFIID and RNA polymerase II on DNA. However, by testing
additional PU.1 mutants that eliminated either both acidic domains or
the glutamine-rich domain, we have determined that only the
glutamine-rich domain is important for myeloid development.
Multiple functional domains of PU.1 are required for controlling gene expression in a hematopoietic system. Our data has demonstrated that the glutamine-rich domain of PU.1 is the only activation domain required for normal myeloid differentiation. The glutamine-rich activation domain works in conjunction with the Ets DNA binding domain and the PEST domain to modulate the activity of PU.1-dependent promoter regions to express genes in the myeloid lineage. Our results obtained from an in vitro differentiation system that mimics normal fetal hematopoiesis have not substantiated the experimental results of others claiming that PU.1 contains an acidic transactivation domain or that the PEST domain is not required for gene expression (12, 20, 23). The short stretch of the PEST domain (amino acids 133 to 140) required implies that a protein-protein interaction critical for myeloid development occurs. This interaction is clearly independent of serine 148, which is important for immunoglobulin 3' enhancer activity in the B-lymphoid lineage (8, 33). PU.1 and possibly another protein interacting with the PEST domain are able to bind to TBP and TAFs and assemble the transcriptional initiation complex to initiate and modulate the expression of PU.1-dependent myeloid promoters. Since there are no PU.1-specific myeloid enhancer regions identified to date, we do not know if the transactivation domain is expendable as has been demonstrated for B-cell-specific enhancer regions in vitro. We are currently developing strategies to test the functional importance of the glutamine-rich transactivation and PEST domains for proper development and functional integrity of both the B-lymphoid and myeloid lineages in vivo.
ACKNOWLEDGMENTS
|
|
|---|
R.C.F., M.C.O., E.W.S., and M.C.S. contributed equally to this work.
We thank Brian Keith, Beth McNally, and Michael Parmacek for critical reading of the manuscript, Lisa Gottschalk for graphic illustrations, and Cheryl Small for secretarial assistance.
This research was supported by the Howard Hughes Medical Institute and the National Institutes of Health (grants HL52094 to M.C.S., CA72769 and KL58716 to E.W.S., and GM42415 to M.L.A.).
FOOTNOTES
Present address: Third Wave Technologies, Inc., Madison, Wis.
* Corresponding author. Mailing address: Department of Medicine and Department of Molecular Genetics and Cell Biology, The University of Chicago, 5841 South Maryland, N138, MC1028, Chicago, IL 60637. Phone: (773) 702-4721. Fax: (773) 702-0271. E-mail: csimon{at}medicine.bsd.uchicago.edu.
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