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Molecular and Cellular Biology, September 1998, p. 5557-5566, Vol. 18, No. 9
0270-7306/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
The Maternal CCAAT Box Transcription Factor Which Controls GATA-2
Expression Is Novel and Developmentally Regulated and Contains a
Double-Stranded-RNA-Binding Subunit
Robert L.
Orford,1
Carl
Robinson,1
Joanna M.
Haydon,1
Roger K.
Patient,2 and
Matthew
J.
Guille1,*
Biophysics Laboratories, Division of
Molecular and Cell Biology, Institute of Biomolecular and
Biomedical Sciences, University of Portsmouth, Portsmouth PO1
2DY,1 and
Developmental Biology
Research Centre, Biomedical Sciences Division, The Randall
Institute, King's College London, London WC2B
5RL,2 United Kingdom
Received 17 February 1998/Returned for modification 24 March
1998/Accepted 10 June 1998
 |
ABSTRACT |
The transcription factor GATA-2 is expressed at high levels in the
nonneural ectoderm of the Xenopus embryo at neurula stages, with lower amounts of RNA present in the ventral mesoderm and endoderm.
The promoter of the GATA-2 gene contains an inverted CCAAT box
conserved among Xenopus laevis, humans, chickens, and mice.
We have shown that this sequence is essential for GATA-2 transcription
during early development and that the factor binding it is maternal.
The DNA-binding activity of this factor is detectable in nuclei
and chromatin bound only when zygotic GATA-2 transcription starts.
Here we report the characterization of this factor, which we call CBTF
(CCAAT box transcription factor). CBTF activity mainly appears late in
oogenesis, when it is nuclear, and the complex has multiple subunits.
We have identified one subunit of the factor as p122, a
Xenopus double-stranded-RNA-binding protein. The p122 protein is perinuclear during early embryonic development but moves
from the cytoplasm into the nuclei of embryonic cells at stage 9, prior
to the detection of CBTF activity in the nucleus. Thus, the
accumulation of CBTF activity in the nucleus is a multistep process. We
show that the p122 protein is expressed mainly in the ectoderm.
Expression of p122 mRNA is more restricted, mainly to the anterior
ectoderm and mesoderm and to the neural tube. Two properties of CBTF,
its dual role and its cytoplasm-to-nucleus translocation, are shared
with other vertebrate maternal transcription factors and may be general
properties of these proteins.
 |
INTRODUCTION |
Cellular differentiation during
early vertebrate development is dependent upon the regulated expression
of tissue-restricted transcription factors which, in turn, act to
determine cell fate. GATA-2 is one such protein. It is a member of a
family of six vertebrate zinc finger transcription factors
characterized by the ability to bind to the DNA sequence WGATAR
(16, 25, 29, 35, 73). Various members of this family have
been shown to control tissue-specific gene expression principally in
hematopoietic cells (47) and heart and endodermally derived
tissues (19, 57). GATA-2 expression has been studied in mice
(14, 61), chickens (73), zebrafish (1,
39) and Xenopus laevis (7, 8, 27, 49, 66,
77), where it has been found in hematopoietic precursors,
immature erythroid cells, proliferating mast cells, and the
central nervous system. The function of GATA-2 has been tested
by the creation of homozygous null mutant mice by homologous recombination. These mice lack all hematopoietic lineages
(61). This is most likely a result of the need for GATA-2
for both the survival and proliferation of early progenitors
of these lineages (62).
In the developing Xenopus embryo, GATA-2 is present as a
maternal mRNA and protein (27, 49, 66, 77). Zygotic
transcription of GATA-2 commences after the mid-blastula transition
(MBT) at the start of gastrulation (stage 10.5) and is up-regulated by BMP-4 (34, 55, 75). By the end of gastrulation at stage 15, in situ hybridization studies show expression to be in all three germ
layers (at its highest levels in ectoderm), extending ventrally
from the edge of the neural plate (66). Later,
expression becomes more restricted to the ventral blood islands,
the dorsal-lateral plate mesoderm, and particular regions of the
central nervous system (7). Accumulation of GATA-2
mRNA can be inhibited in gastrula stage embryo explants by coculturing
with either dorsal marginal zones or the dorsalizing and neural
inducing factor noggin (59, 66), suggesting that
the localization of GATA-2 to the ventral region is a consequence of
negative control during dorsalization and neural induction, events
which inactivate BMP-4 (51, 76). Evidence has shown that in
the nonneural ectoderm of Xenopus, GATA-2 is patterned, with
high levels of mRNA found in the anterior region becoming progressively
lower posteriorly (53). Negative regulation of GATA-2
transcription by fibroblast growth factor in the posterior region may
be at least partially responsible for this expression pattern. Although
the signals controlling expression of GATA-2 in early
Xenopus development have been studied extensively, less is
known of the function of GATA-2 in early development outside the blood
lineages. Recently, this has been investigated in Xenopus by
expression of a dominant negative form of the protein (60).
The results obtained show an important role for GATA-2 in ventral
mesoderm formation.
The trans-acting factors controlling GATA-2 expression are
also less well defined than the signaling molecules. Regulatory regions
of the GATA-2 gene have been identified in Xenopus
(8), humans (17), zebrafish (39), and
mice (41). In Xenopus, analysis of the GATA-2
promoter has been confined to early stages of development (prior to
neurula stages), when the major site of GATA-2 transcription is in the
ectoderm. A 1.65-kb region of DNA upstream from the start of
transcription directed correct temporal and spatial regulation of a
linked reporter gene. Subsequent deletion analysis revealed that
sequences between
66 and
31 in the promoter were the minimum
needed for correct temporal control of GATA-2 transcription. Within
this region is a CCAAT box in a reverse orientation, and we have shown
(48) that a maternal CCAAT box transcription factor (CBTF)
binds to this site and that a single point mutation (CCgAT) abolishes
its binding. Introducing this mutation into the 1.65-kb GATA-2
promoter inactivates it; thus, CBTF is essential for GATA-2
transcription. Although CBTF is present in the embryo prior to
zygotic GATA-2 transcription, its activity, as assayed by
electrophoretic mobility shift assay (EMSA), is not
detectable in the nucleus or chromatin-bound fraction until stage 10.5, when GATA-2 transcription begins (8). The crucial role
of CBTF in GATA-2 regulation is emphasized by the conservation
of its binding site between species. An extended homology around the
Xenopus CCAAT box is found in the human GATA-2 promoter
(17). Similarly, an extended homology is found in the general promoter of the murine GATA-2 gene described by Yamamoto and colleagues (41); this gene has a second upstream
promoter which is specific for hematopoietic cells. Assuming that
Xenopus also has two GATA-2 promoters, it is then very
likely that the one previously described and under investigation here
(8) corresponds to the general mouse promoter.
CBTF is thus a maternal transcription factor whose activity is tightly
regulated, and while it is becoming clear that some maternal
transcription factors have vital roles in patterning the vertebrate
embryo (22, 23, 36, 37, 44), the extent of their
involvement in transcription control after zygotic gene activation
remains unclear. Despite the presence of maternal transcription factors, zygotic expression is suppressed in Xenopus until
the MBT. Studies have suggested that a major component of this
suppression is competition between transcription factors and
nucleosomes for binding of DNA (50, 52) and that the
decrease in the pool of free histones in the developing embryo at the
MBT allows transcription factors to bind and, thus, zygotic
transcription to commence. It is likely, however, that part of the
pre-MBT suppression is due to altered affinity of maternal
transcription factors for DNA or their altered access to DNA, although
the evidence for this is controversial (2). Once zygotic
gene activation has occurred, the transcription factors present,
including those maternally derived, which regulate genes later in
development must be under stringent control to prevent aberrant
transcription of their target genes. Holding a transcription factor in
the cytoplasm is a common form of control in both invertebrates and
vertebrates (67) and has been reported for several
Xenopus DNA-binding proteins (6, 8, 30, 40, 55,
68). This form of transcription factor regulation has a critical
role in regulating development; for example, when
-catenin
accumulates in the nucleus interacting with XTCF-3, thus forming a
functional transcription factor and a dorsalizing center (22,
44), and when proteins of the SMAD family become nuclear in
response to transforming growth factor
stimulation (23,
37, 38).
To (i) determine the molecular mechanisms underlying the regulation of
GATA-2 transcription and, hence, the control of downstream processes, for example, commitment to ventral fate, particularly the
blood islands, and (ii) further investigate the role and control of a
maternal transcription factor in vertebrates, we have commenced the
biochemical characterization of CBTF. Assaying CBTF activity during
development shows that most appears late in oogenesis, when the
activity is confined to the nucleus (germinal vesicle). We
identify the number and sizes of the CBTF subunits;
furthermore, we identify the cDNA encoding one of these subunits and
demonstrate that the encoded protein (p122) translocates from the
cytoplasm to the nuclei of embryonic cells between stages 8 and 9 of development. p122 is a maternal double-stranded RNA (dsRNA)-binding
protein (5) and is detectable throughout the ectoderm and,
to a lesser extent, the mesoderm. Expression of p122 mRNA is more
restricted, mainly to the anterior ectoderm and mesoderm and to the
neural tube. These data show that CBTF, a vertebrate maternal
transcription factor, has at least two functions and undergoes
cytoplasm-to-nucleus translocation. Taken together with the work of
others, the data presented here suggest that both of the above
characteristics are widespread among the members of this class of
molecules.
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MATERIALS AND METHODS |
Embryos and RNA injections.
X. laevis females were
obtained from Nasco and maintained at a temperature of 21°C. They
were fed twice weekly on frog pellets (Blades Biologicals, Kent,
England). Male frogs were also from Blades. Embryos were prepared and
injected with RNA as described by Gove et al. (19). RNA for
injections was prepared by using an Ambion Message Machine kit. The
activity of the RNA was tested in reticulocyte lysate (Promega). The
untagged RNA was slightly more active than that encoding
myc-tagged p122. Staging of embryos was carried out in
accordance with the Normal Table (43).
Whole-mount in situ hybridization.
p122 antisense and sense
digoxigenin-labeled RNA probes were transcribed from the partial
cDNA described. Whole-mount in situ hybridization was performed
on staged embryos as described by Harland (21) with the
modifications of Bertwistle et al. (7). Photomicrographs
were taken with a Nikon SMZ-U stereomicroscope by using a Nikon U-III
camera.
Immunocytochemistry.
Staged embryos were fixed as described
by Harland (21), bleached with a solution of 5% formamide,
0.5× SSC (1× SSC is 0.15 M NaCl plus 0.015 M sodium citrate), and
10% H2O2 for 5 to 10 min, and washed three
times with phosphate-buffered saline (pH 7.5) containing 0.1%
Tween 20 (PBST). Embryos were preincubated in PBST containing 20%
goat serum for 2 h and then transferred to primary antibody
solution (anti-p122 serum diluted 1/1,000 in PBST containing 20%
goat serum) for 16 h. The embryos were then washed five
times for 1 h each time with PBST, preincubated in PBST containing
20% goat serum for 2 h, and then transferred to secondary
antibody solution (alkaline phosphatase [AP]- or horseradish
peroxidase [HRP]-linked anti-rabbit immunoglobulin G diluted
1/1,000 or 1/400, respectively, in PBST containing 20% goat serum)
for 16 h. The embryos were washed five times for 1 h each
time with PBST and developed with BM purple (AP substrate; Boehringer Mannheim) or Fast DAB (HRP substrate; Sigma). The reaction was stopped by the addition of Tris-EDTA, and the embryos were refixed
and stored in methanol at
20°C.
Sectioning of embryos.
Following whole-mount in situ
hybridization and immunocytochemistry, embryos were embedded in a
gelatin-albumin mixture as described by Gove et al. (19),
and 50-µm sections were cut with a vibratome. Embryo sections were
photographed on a Nikon Eclipse E800 microscope with differential
interference contrast optics by using a Nikon U-III camera system.
EMSA.
Oocyte analysis was carried out as described by Brewer
et al. (8). For embryo analysis, pools of 50 embryos were
homogenized in 10 volumes of 20 mM HEPES (pH 7.9)-2 mM
MgCl2-10 mM
-glycerophosphate-2 mM levamisol-Complete
EDTA-free protease inhibitor cocktail tablets (Boehringer
Mannheim). Yolk proteins were removed by extraction with an equal
volume of 1,1,2-trichlorotrifluoroethane (Freon) (72), and
extracts were used immediately. For both oocyte and embryo analyses of
CBTF, each assay mixture contained 4 fmol of a ds oligonucleotide
probe, one strand of which had been labeled with
[
-32P]ATP by polynucleotide kinase prior to annealing;
500 ng of poly(dI-dC) · poly(dI-dC) (Pharmacia); 4% (wt/vol)
Ficoll; 20 mM HEPES; 2 mM MgCl2; 50 mM NaCl; and extract as
indicated in the figure legends, which was added last. When required, a
competitor oligonucleotide was freshly annealed and 200 fmol was added
to the assay mixture. The assay mixture was incubated at 0°C for 15 min prior to separation on a nondenaturing 4% polyacrylamide gel in
0.25× Tris-borate-EDTA. Separation was carried out at 200 V for 105 min at 4°C. EMSA of nuclear factor Y (NF-Y) was performed exactly as
described in Dorn et al. (11), by using 4 fmol of a
double-stranded probe corresponding to the Y box from the murine major
histocompatibility complex class II E-kappa-alpha gene (12)
and 500 ng of poly(dI-dC) · poly(dI-dC). The band which was
self-competed with a 500-fold excess of the unlabeled probe, but not
with an unrelated sequence, was identified as NF-Y. Gels were then
dried and subjected to autoradiography at
70°C for 1 to 20 h.
BrdU cross-linking.
Embryo extracts were prepared and
incubated essentially as described above, by using 40 fmol of a
bromodeoxyuridine (BrdU)-substituted ds oligonucleotide and 1 µg of
poly(dI-dC) · poly(dI-dC) for each 20 µl of extract. The
assay mixture was subjected to UV irradiation at 254 nm for 15 min,
separated by preparative EMSA as described above, and subjected to
autoradiography for 1 h at 4°C. The region of the gel
corresponding to CBTF was removed, crushed, resuspended in 500 µl of
sodium dodecyl sulfate (SDS) loading buffer, and incubated at
50°C for 16 h. The gel was removed from the solution, and
protein-DNA complexes were precipitated with 300 mM sodium acetate (pH
4.8) and 2.5 volumes of ethanol. The protein-DNA complexes were
separated on a 10% SDS-polyacrylamide gel, and the gel was dried and
subjected to autoradiography for 2 to 7 days.
Immunodepletion of EMSA reactions.
Embryo extracts were
prepared and incubated essentially as described above, with the
addition of Nonidet P-40 to a final concentration of 0.1% (wt/vol).
For the immunodepletion assays, 10 µl of extract was incubated with 3 to 5 µl of antiserum or preimmune serum for 1 h at 20°C prior
to probe addition and at 4°C for 15 min after probe addition and then
separated as described above.
Isolation of CCAAT-binding cDNAs.
A cDNA library
prepared in
ZAPII from mRNA from animal pole explants taken at stage
7.5 and cultured to gastrula stages (a gift from Alison Snape and Jim
Smith) was probed by using the
66 to
31 sequence of the GATA-2
promoter as previously described (64). The binding and
washing conditions were those previously used to identify a CCAAT
factor (33).
Western blotting.
Western blotting was carried out as
described by Bass et al. (5).
 |
RESULTS |
CBTF is a newly described multisubunit CCAAT box factor which
is made late in oogenesis.
To discover whether our CBTF
corresponds to any previously known CBTF, we first assayed the
time course of CBTF activity in development. This allowed
comparison with a CCAAT factor known to be present maternally
in Xenopus, FRGY2, which decreases in abundance during
oogenesis (69). This was particularly important in view of
the homology between the CBTF binding site and that of FRG Y2 (8,
69). We therefore made whole-oocyte or embryo extracts and
assayed CBTF activity by EMSA. CBTF activity is detectable from stage
II of oogenesis, the earliest stage that we could isolate (Fig.
1A). A small increase in level was
detected at stage III, a further small increase was seen at stage IV,
the greatest increase occurred between stages IV and V, and a
further small increase occurred by stage VI. At stage VI, CBTF activity
was detected only in the nuclei of oocytes (see Fig. 7). During
embryonic development, no change in CBTF activity is seen until
after the start of gastrulation; activity then increases steadily to
the latest stage (stage 29) which we have analyzed (Fig. 1B).

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FIG. 1.
CBTF activity in oogenesis and embryonic
development. Oocytes from a single Xenopus female were
manually defolliculated and staged as described by Smith et al.
(58). Embryos were prepared from eggs laid by a single
Xenopus female and fertilized with crushed testes from a
single male. Sets of 20 oocytes or embryos were homogenized, and
yolk proteins were removed by Freon extraction. Extract equivalent to
one-half oocyte (A) or embryo (B) from the stages shown was then
analyzed by EMSA using a probe from 66 to 31 of the GATA-2
promoter. The identity of CBTF was confirmed by competition with
wild-type (CCAAT core) and mutant (CCgAT core) oligonucleotides (data
not shown).
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These data show that CBTF is not expressed in the same temporal pattern
as FRGY2. However, to discover whether CBTF is related to any other,
previously identified transcription factors, we used UV cross-linking
to investigate the sizes of its subunits. We chose unfractionated
oocyte extract as our protein source to avoid the possibility of loss
of particular protein components of the factor. Oocyte extract was
mixed with either a BrdU-substituted wild-type (CCAAT) or mutant
(CCgAT) probe and exposed to UV irradiation. Specific and nonspecific
complexes, as determined by competition with unlabelled wild-type or
mutant oligonucleotides, were then separated by preparative EMSA. The
covalently linked, specific DNA-protein complexes were then
separated by SDS-polyacrylamide gel electrophoresis (PAGE) and
visualized by autoradiography (Fig. 2).
The complexes were only seen when the wild-type probe was used, thus
confirming their identity as components of CBTF. Two major bands were
observed with apparent molecular masses of approximately 120 and 90 kDa; a number of weak but specific bands were also apparent at
molecular masses of 160, 55, and 30 kDa (Fig. 2). The nonstoichiometric
nature of the bands observed may simply reflect differing efficiencies
of cross-linking or be due to the presence of two highly related
complexes which share a number of subunits. Separate experimental
evidence suggests that the latter is the case (45).
Treatment of the complexes with DNase I prior to running of the
SDS-PAGE resulted in only the two strong complexes being visible but
little change in their mobility (data not shown). CBTF is thus a
multisubunit complex whose major components are considerably larger
than those of previously described CCAAT factors (4, 42,
47), with the exception of the 114-kDa CCAAT box-binding factor,
which has only a single known subunit (33).

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FIG. 2.
BrdU cross-linking of CBTF. Oocyte extract was incubated
with a BrdU-substituted wild-type (CCAAT core, BrdU) or mutant (CCgAT
core, MT) oligonucleotide under the conditions used for EMSA (see
Materials and Methods). After incubation, the solutions were exposed to
UV irradiation or left on ice (BrdU VE). The CBTF complex was then
isolated by preparative EMSA, and the equivalent region of the EMSA gel
for the mutant probe was also cut out. The complex was then eluted,
precipitated, and run on SDS-PAGE. The molecular size markers shown are
a 10-kDa ladder (Gibco Bethesda Research Laboratories). The covalently
linked protein-DNA complexes were then visualized by autoradiography.
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dsRNA-binding protein p122 is a component of CBTF.
To
confirm CBTF's novelty and to identify the proteins involved in this
complex, we used a direct screening method to isolate candidate cDNAs
encoding subunits of the factor. A gastrula stage animal cap cDNA
expression library was screened by using the CBTF binding site. Four
hundred thousand plaques were screened initially, from which 12 positives were isolated. In the third round of screening, when the
isolates were plaque pure, the filters were cut in half, one half was
probed with the wild-type sequence, and the other was probed with the
mutant. Three showed specific binding, and these were subcloned and
sequenced. One of these showed identity to a known Xenopus
dsRNA-binding protein (variously named 4F, ubp4, or p122). It was a
partial cDNA, corresponding to nucleotides 1338 to 2527 from the
published sequence (5); this region contains the
dsRNA-binding motifs of p122.
To test whether p122 is genuinely a component of CBTF, we were able to
take advantage of the availability of an antibody to
this protein.
Oocyte extract was mixed with either preimmune serum
or antiserum
(kindly provided by B. Bass), and CBTF was subsequently
assayed by
EMSA. The antiserum blocked formation of the CBTF-DNA
complex
specifically (Fig.
3). As a control for
the antiserum-degrading
proteins within oocyte extract, a second
CCAAT factor (NF-Y) was
assayed and found to be unaffected (Fig.
3A). Preparative EMSA
(
74) was carried out by using equal
amounts of the same embryo
extract for both wild-type and mutant CBTF
binding sites. This
was followed by Western blotting of the purified
protein to test
for the presence of p122 in the CBTF complex. In three
experiments,
protein prepared from the region of the EMSA gel
corresponding
to the CBTF band contained very much greater levels of
p122 and
p98 when the wild-type (CCAAT) probe was used in the EMSA
reaction
than when the mutant (CCgAT) was used (Fig.
3B). Again, this
strongly
suggests that p122 (and also its variant p98) binds to the
CCAAT
region of the GATA-2 promoter specifically and is part of the
CBTF complex. Nonetheless, it remained possible that an
immunologically
related protein was the genuine CBTF component. To
eliminate this
possibility, we took a second approach. We injected
fertilized
eggs with synthetic RNA encoding the full-length
dsRNA-binding
protein or one encoding the same protein
with a
myc epitope at
the N terminus (kindly provided by
M. Wormington). The embryos
were allowed to develop to stage 15 to
ensure that these RNAs
had been translated and had had the opportunity
to be incorporated
into CBTF. Protein was subsequently prepared from
these embryos
and, after this had been incubated with various amounts
of purified
antibody recognizing the
myc epitope, CBTF
was assayed by EMSA
(Fig.
4). When
the epitope-tagged protein was expressed, incubation
with the
antibody decreased formation of the CBTF-DNA complex
between 50 and
75% in three experiments (the CBTF complex detected
by EMSA was
estimated by PhosphorImager analysis). When the untagged
protein was
expressed, incubation with antibody reduced complex
formation less than
5% in all three experiments (Fig.
4, compare
lanes 4 and 10). p122 has
not been reported to be a subunit of
a CCAAT box factor, thus
confirming that CBTF has not been characterized
previously.

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FIG. 3.
(A) Immunodepletion of embryo extracts by anti-p122
antibody. Extract from pre-MBT embryos was incubated with 3 µl of
preimmune serum (lanes 1 and 3) or anti-p122 serum (lanes 2 and 4). The
extract was subsequently analyzed for CBTF or NF-Y activity by EMSA,
and the specificity of these complexes was confirmed by competition
with a 200-fold excess of an unlabeled probe oligonucleotide (data not
shown). (B) Preparative EMSA of CBTF and subsequent detection of p122
by Western blotting. Extract from 40 embryos was incubated with 40 fmol
of a GATA-2 promoter probe (see Materials and Methods) containing
the core sequence CCAAT (W.T.) or CCgAT (Mut) in the presence of 40 µg of poly(dI-dC) · poly(dI-dC). Following fractionation by
preparative EMSA, the bands were visualized by autoradiography of the
wet gel, and the region corresponding to CBTF, which was confirmed by
competition, was cut out (rectangles). Protein was recovered from the
gel slices and run on a 10% SDS-PAGE gel, which was analyzed for p122
by Western blotting. Images were processed on a Macintosh G3 using
Adobe Photoshop and Microsoft Powerpoint.
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FIG. 4.
Immunodepletion of extracts from embryos expressing
ectopic p122 and myc-p122 by anti-myc antibody.
Embryos were injected with 200 pg of synthetic RNA encoding p122 (lanes
1 to 6) or myc epitope-tagged p122 (lanes 7 to 12) and
allowed to develop to stage 15. Extracts were then prepared, and these
were incubated with 0 to 5 µl of purified anti-myc
epitope antibody (a gift from Pamela Taylor-Harris); CBTF was
subsequently assayed by EMSA. To confirm that the complexes assayed
were CBTF, extracts from injected embryos were assayed in the presence
of a 100-fold excess of a wild-type (CCAAT core, S) or mutant (CCgAT
core, M) oligonucleotide.
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The p122 subunit of CBTF is expressed mainly in the ectoderm.
To study the relationship between the regions expressing GATA-2 and
those expressing p122, we used the anti-p122 serum for immunocytochemistry (Fig. 5A to G).
Controls using the preimmune serum showed no staining (Fig. 5A).
Maternal p122 was detected mainly in the animal half of the blastula
embryo (Fig. 5B), the prospective ectoderm and mesoderm, and this is
where expression of the protein remained up to stage 29, the latest
stage which we examined. p122 was found throughout the ectoderm in all
stages we examined. The less highly stained lateral regions of the
embryos in Fig. 5E and F clearly contained p122 when seen in sections (Fig. 5G and data not shown). Lower levels of the protein were detectable in the mesoderm (in Fig. 5G, the border between ectoderm and
mesoderm is indicated by an arrowhead) and in a few cells of the
endoderm (Fig. 5C and G, arrowheads). The expression of p122 mRNA was
investigated by whole-mount in situ hybridization (Fig.
6). With this technique, p122 mRNA was
undetectable until neurula stages, when it was seen in the anterior of
the embryo and neural tissue (Fig. 6B and C), and a control using a
sense RNA probe showed no staining (Fig. 6A). The levels of expression appeared genuinely low, and we achieved much higher levels of staining
by using probes for other mRNAs similar in length and digoxigenin-UTP incorporation. Later, expression was found throughout the head and anterior neural tissue, excepting the cement gland (Fig.
6D and E). Less strong but specific staining was also evident in the
region of the ventral blood islands (arrowhead in Fig. 6E). The dorsal
view of a stage 32 embryo showed heavy staining in the eyes and
anterior region of the head together with two regions of increased
expression in the brain (Fig. 6F, arrowhead). Sections through the
stage 32 embryos (Fig. 6G, through the more posterior region indicated
by the arrowhead in Fig. 6F; Fig. 6H, just posterior to the head)
revealed that the highest levels of p122 mRNA expression are found in
the ectoderm and that p122 mRNA can also be detected in the mesoderm
and neural tube.

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FIG. 5.
p122 protein is expressed mainly in the ectoderm.
Embryos were analyzed for p122 expression by immunocytochemistry using
antiserum from Brenda Bass and visualized by BM purple staining of an
AP-linked secondary antibody at stage 6.5 (lateral view) (B), stage
10.5 (vegetal view) (C), stage 17 (dorsal view) (D), stage 26 (E), and
stage 30 (F) and DAB staining of an HRP-linked secondary antibody at
stage 29 (G). The dorsal lip is clearly visible in C. Anterior is to
the left in A and D to F, and dorsal is to the top in lateral views and
the section (A, E, F, and G). The 50-µm section shown was taken from
the trunk, posterior to the gill arches (G). Incubation with preimmune
serum replacing antiserum showed no staining at stages 6 to 30 (A and
data not shown). The arrowhead in C shows a p122-stained endodermal
cell, and that in G indicates the boundary between the ectoderm and the
mesoderm and a p122-stained endodermal cell.
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FIG. 6.
p122 mRNA is expressed mainly in the ectoderm. Embryos
were probed for p122 by whole-mount in situ hybridization at stage 19 (lateral view) (B); stage 19 (dorsal view (C), stage 28 (lateral view)
(D), stage 32 (lateral view) (E), stage 32 (dorsal view) (F), and stage
29 followed by transverse sectioning (G and H). Anterior is to the left
in A to F, and dorsal is to the top in lateral views. The 50-µm
sections shown were taken as follows: G, through the posterior region
indicated by the arrowhead in F; H, just posterior to the head. In situ
hybridization with a sense probe showed no staining in stage 11 to 30 embryos (A). The arrowhead in E indicates the extent anteriorly to
which p122 mRNA is detectable in the region of the ventral blood
islands, and that in F indicates the region of increased staining in
the brain.
|
|
p122 is present in the cytoplasm and nuclei of oocytes, but CBTF is
solely nuclear.
We have previously shown that CBTF DNA-binding
activity becomes detectable in nuclear extracts and in the
chromatin-bound fraction only when these are prepared from embryos
taken at, or after, the formation of the dorsal lip at stage 10.5 (8). Many proteins which undergo such a shift in
localization are found in the oocyte nucleus (13). We
therefore manually dissected oocyte nuclei and assayed CBTF activity in
extracts of the nucleus and cytoplasm (Fig.
7A). In duplicate samples, CBTF activity
was detected only in the nucleus. We used Western blotting to test whether p122 is also nuclear, and although the majority was, p122 was
detectable at low levels in the oocyte cytoplasm (Fig. 7B).

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[in a new window]
|
FIG. 7.
CBTF is nuclear in oocytes, whereas p122 is detected in
both the cytoplasm and the nucleus. Duplicate sets of 20 oocytes from a
single Xenopus female were defolliculated manually and
dissected into nuclear (N) and cytoplasmic (C) fractions. Yolk proteins
were removed by Freon extraction, and the CBTF activity in each
fraction (equivalent to the nucleus or cytoplasm from one-half oocyte)
was assayed by EMSA (A). The same fractions (equivalent to the nucleus
or cytoplasm from two oocytes) were also assayed for p122 by Western
blotting (B).
|
|
p122 translocates from the cytoplasm to the nucleus during
embryonic development prior to detection of nuclear CBTF activity.
We next used immunocytochemistry to test whether translocation of p122
caused CBTF to re-enter the nucleus at the start of gastrulation. At
stage 8 in whole-embryo samples or sections (Fig. 8A and C, respectively), the nuclei
(large arrows) can be seen as clear, surrounded by cytoplasm staining
positive for p122. In contrast, at stage 9 (Fig. 8B and D) the majority
of p122 becomes nuclear, although some staining is clearly retained in
the cytoplasm. Thus, p122 moves from being cytoplasmic to predominantly
nuclear between stages 8 and 9, some 4 h prior to the detection of
CBTF DNA-binding activity in the nucleus. During the course of
these investigations, we noted that CBTF was perinuclear in early
embryos (Fig. 8E and F; also 8A, small arrow). Possible mechanisms
underlying the processes giving rise to these observations are
discussed below.

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[in a new window]
|
FIG. 8.
p122 becomes nuclear at stage 9 of Xenopus
development. Embryos were analyzed for p122 expression by
immunocytochemistry using anti-p122 serum from Brenda Bass,
visualized by DAB staining of an HRP-linked secondary antibody at
stages 8 (A and C), 9 (B and D), and 5 (E and F). A and B show animal
pole cells of whole embryos. C and D show 50-µm sections of the
same regions. E shows an animal view of the embryo from which the
section in F was taken, and F shows a single cell. The large arrowheads
in A and C show nuclei, while the small arrowhead in A indicates the
stronger staining observed around the nucleus prior to translocation.
|
|
 |
DISCUSSION |
Our analysis of CBTF has revealed that a previously undescribed
CCAAT box transcription factor (CBTF) regulates the activity of the
GATA-2 gene during early development (8); the factor is
a multisubunit complex which is made late in oogenesis, when it is
nuclear. One subunit of CBTF has been identified as dsRNA-binding protein p122; during embryonic development, this becomes nuclear prior
to the detection of nuclear CBTF activity. Expression of the p122
protein is highest in the ectoderm but is also detectable in the
mesoderm, as is its mRNA.
CBTF has not been characterized before.
We have analyzed CBTF
activity throughout oogenesis and early embryonic development. CBTF
activity appears mainly late in oogenesis, as does XLPOU-60
(68). This is not always so for maternal transcription
factors; for example, FRGY2 and XSox-3 are made early (28,
69). These data show that CBTF has an activity profile which
differs markedly from the amount of FRGY2 protein during oogenesis and
suggests that they are distinct despite the similarity between their
binding sites (for example, 11 of 12 bases between the CBTF site in the
GATA-2 promoter and the NF-Y site in the tk
promoter). The level of CBTF activity increases steadily from the
maternal level during development. However, the region of the embryo
expressing p122 protein far exceeds that expressing the mRNA, strongly
suggesting that this protein is stable in embryos and that the maternal
contribution to the level of CBTF is a major one well into development.
Persistence of protein has also been observed for the Oct-1
transcription factor in Xenopus embryos (63). Two
further pieces of evidence support the premise that CBTF has not been
characterized previously. First, the subunit sizes are different from
those reported for other CCAAT-binding proteins, and these are
generally well conserved during evolution (9).
Second, we have carried out a number of chemical footprinting and
interference techniques on CBTF-DNA complexes (46) and found that the region protected by CBTF extends further from the CCAAT core
than reported for any other CCAAT factor. The final piece of evidence
that CBTF is not a previously described CCAAT-binding protein
comes from the fact that one of its subunits has been identified
as p122, a dsRNA-binding protein.
A subunit of CBTF has two functions.
Previous work has
shown that p122 contains two dsRNA-binding motifs in addition
to an auxiliary domain which is rich in arginine and glycine; the
RNA-binding domain has been mapped to the dsRNA-binding motifs (5). p122 binds only poorly to nonspecific DNA, and analysis of p122 expression showed that two transcripts are present in
oocytes (5). These may represent the two genes present in this pseudotetraploid species or alternative splice variants. Two
proteins were also observed on Western blotting of embryo extracts at
molecular masses of 120 and 98 kDa. As these comigrate in SDS-PAGE
precisely with the major species which we observe in CBTF upon
cross-linking (45) and are both specifically detected by
preparative EMSA, it is highly likely that both variants of the protein
can be part of the CBTF complex. Functional analysis of p122 has
recently been undertaken by Wormington and coworkers (70),
and it has been shown to be involved in the masking of maternal mRNAs.
A human protein with a high degree of homology to p122 (68% identity,
81% homology) has been identified. This has been shown to be a part of
a protein complex which binds to the NF-AT sequence of the
interleukin-2 promoter (10, 26). However, the bound DNA
sequence has no homology to the binding site of CBTF. As the human NF90
protein that is homologous to Xenopus p122 has a partner in
the NF-AT complex, it is possible that the distinction between their
binding sites is a result of p122 and NF90 forming different complexes
with disparate DNA-binding specificities. A second possibility is
that these two proteins represent distinct members of a family of
related transcription regulatory or dsRNA-binding proteins, again
having different DNA-binding specificities.
CBTF and p122 are expressed in regions where GATA-2 is not
transcribed.
We have used an antibody to p122 to identify the
regions of the embryo in which p122 and its shorter variant p98
are expressed. Although this antiserum recognizes both variant
forms of the protein, Western blotting of dissected embryo extracts has
shown that both are present in all regions of the embryo tested so far.
The protein is confined mainly to the prospective ectoderm and mesoderm
at blastula stages, a pattern that has been observed before for
maternal transcription factors in Xenopus, for example,
XLPOU-60 (68). p122 is present in all cells where GATA-2
transcription is activated, but its expression also extends beyond
these areas. For example, p122 is in the neural ectoderm at neurula
stages, a region where GATA-2 is not expressed (66).
Such expression may reflect the dual role of p122; for example, it may
only be in the CBTF complex in areas where GATA-2 is expressed,
while elsewhere it is carrying out RNA-binding functions or is part
of a separate transcription factor. This is unlikely, however, since
CBTF DNA-binding activity is detectable in the chromatin-bound
fraction of dissected neural plates of stage 17 (neurula) embryos
(45), the cells of which do not express GATA-2. Thus,
the extensive region expressing p122 and CBTF activity probably
reflects a role in regulating the transcription of a number of genes
(and possibly that of p122 as an RNA-binding protein). Other
elements in the GATA-2 promoter (8) must then restrict
the regions of the ectoderm and mesoderm where this gene is
transcribed.
Subcellular localizations of CBTF and p122 are not always
identical.
When we assayed CBTF activity in oocytes, it was only
detectable in the nuclear fraction; however, p122 was detectable in both the nucleus and the cytoplasm. The latter result is not in accord
with the findings of Bass et al. (5), who reported no p122
in the oocyte cytoplasm. This difference is most likely due to
sensitivity, as the amount of p122 detected in the cytoplasm is much
less than that in the nucleus. However, we cannot detect CBTF activity
in the cytoplasm, even on prolonged exposure of the EMSA gel; this
strongly suggests that p122 is not always a part of an active CBTF
complex. This observation, while it is possibly due to CBTF having a
low affinity for its binding site, might be expected for a protein with
a second function. During embryonic development, the appearance of p122
in nuclei some 4 h before the detection of CBTF activity there is,
however, unexpected. This is highly unlikely to reflect the time taken
to build up a sufficient quantity of CBTF in the nucleus, as while
immunocytochemistry must be regarded as, at best, semiquantitative, it
is clear that the bulk of p122 is in the nucleus at stage 9, when we
estimate that <1% of p122 is in the CBTF complex (45). In
addition, the amount of p122 present in the embryo does not alter until
after CBTF activity is detectable in nuclei (5). CBTF is
present in the embryo before nuclear translocation occurs, and one
might predict that it would gain access to the nucleus as an intact, active complex. This is clearly not the case, and it is possible that
CBTF moves into the nucleus either as separate subunits or as an
inactive complex, becoming active only at the start of gastrulation. These data strongly suggest that a multistep process is responsible for
the translocation of CBTF into the nucleus. The mechanism holding p122
in the cytoplasm before stage 9 is under investigation. p122 has a
nuclear localization signal (5), but this has not been
tested functionally. It is possible that this nuclear localization signal is inactivated by masking with an inhibitor as for NF
B (3) or by modification (40). One strong
possibility is that RNA binding holds p122 in the cytoplasm, as has
been suggested for XLPOU60 (20). The movement of p122 into
the nucleus occurs as many of the maternal mRNAs to which it binds
are degraded. Since the pattern of subcellular movement of p122 closely
resembles that of xnf7, a protein whose control has been intensively
studied (15, 18, 31, 32, 40, 56), we checked for regions of homology between the two (especially for a cytoplasmic retention domain). None were apparent; thus, the cytoplasm-to-nucleus
translocation of p122 is most likely regulated by a mechanism separate
from that which regulates xnf7. We observed perinuclear staining in the
large, yolky cells of stage 6 embryos. While this may be a simple
consequence of exclusion from the remainder of the cytoplasm by yolk
granules, a similar staining pattern has been observed in the less
yolky animal pole cells at stage 8 and for other proteins which undergo
translocation into the nucleus: c-myc (65) and Hsp70 (24). For c-myc, this has also been
observed in cultured cells where there is no yolk and hence has been
proposed to be a stage in the nuclear translocation process
(65).
It is clear from the data presented here and elsewhere (
5,
70) that p122 is a maternal transcription factor with a dual
role. Other vertebrate maternal transcription factors are also
known to
have second functions in embryos. For example, in
Xenopus,
the CCAAT factor FRGY2 also has a role in masking mRNA (
38),
while

-catenin anchors cadherin and forms a transcription factor
with XTCF-3 (
22). In mice, Oct-3 and Sp1 have both been
proposed
to have roles in controlling DNA synthesis (
54,
71), in addition
to transcription. Such dual roles are perhaps no
surprise when
one considers the limit on the amount of material which
can be
produced and stored in an egg and the complex developmental
process
it must control. These dual roles may be a general property of
maternal transcription factors in vertebrates. A second characteristic
of CBTF which may also be a general property of such factors,
at least
in
Xenopus, is cytoplasm-to-nucleus translocation, of
which
there are now several examples (
6,
30,
40,
55,
68). Our data
and those relating to c-
myc (
65) strongly suggest
that a multistep process underlies the movement of these proteins
into
the nucleus. Since CBTF demonstrates both dual functions
and also
cytoplasm-to-nucleus translocation, its further investigation
will add
to our knowledge of mechanisms common to a number of
vertebrate
maternal transcription factors.
 |
ACKNOWLEDGMENTS |
Rob Orford and Carl Robinson contributed equally to the work
presented here.
We thank Alison Snape and Jim Smith for the cDNA expression library and
Brenda Bass and Mike Wormington for reagents, discussions, and allowing
us access to data prior to publication. We are also most grateful to
Geoff Kneale, Colyn Crane-Robinson, and Sarah Newbury for comments on
the manuscript.
This work was supported by the Wellcome Trust and the Biotechnology and
Biological Sciences Research Council (U.K.).
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Division of
Molecular and Cell Biology, School of Biological Sciences, University
of Portsmouth, King Henry Building, King Henry I St., Portsmouth PO1 2DY, U.K. Phone: 01705 842066. Fax: 01705 842053. E-mail: matthew.guille{at}port.ac.uk.
 |
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