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Molecular and Cellular Biology, November 1999, p. 7846-7856, Vol. 19, No. 11
0270-7306/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
The Levels of the bancal Product, a
Drosophila Homologue of Vertebrate hnRNP K Protein, Affect
Cell Proliferation and Apoptosis in Imaginal Disc Cells
Bernard
Charroux,
Corinne
Angelats,
Laurent
Fasano,
Stephen
Kerridge, and
Christine
Vola*
Laboratoire de Génétique et
Physiologie du Développement, UMR 6545 CNRS-Université,
IBDM CNRS-INSERM-Université de la Méditerrannée,
F-13288 Marseille Cedex 09, France
Received 28 April 1999/Returned for modification 7 June
1999/Accepted 14 July 1999
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ABSTRACT |
We have characterized the Drosophila bancal gene, which
encodes a Drosophila homologue of the vertebrate hnRNP K
protein. The bancal gene is essential for the correct size
of adult appendages. Reduction of appendage size in bancal
mutant flies appears to be due mainly to a reduction in the number of
cell divisions in the imaginal discs. Transgenes expressing
Drosophila or human hnRNP K are able to rescue weak
bancal phenotype, showing the functional similarity of
these proteins in vivo. High levels of either human or
Drosophila hnRNP K protein in imaginal discs induces programmed cell death. Expression of the antiapoptotic P35 protein suppresses this phenotype in the eye, suggesting that apoptosis is the
major cellular defect caused by overexpression of K protein. Finally,
the human K protein acts as a negative regulator of bancal gene expression. We propose that negative autoregulation limits the
level of Bancal protein produced in vivo.
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INTRODUCTION |
Heterogeneous nuclear RNAs
(hnRNAs), from which mRNAs are derived by RNA processing,
are associated with specific nuclear proteins and form hnRNP complexes
in eukaryotes (reviewed in reference 16). Monoclonal
antibodies to several different hnRNP proteins immunoprecipitate a set
of about 20 similar proteins called hnRNP A to U (58).
Extensive biochemical studies have suggested a role for
vertebrate hnRNP proteins in splicing and nucleocytoplasmic transport of mRNA (11, 47, 59, 60, 62, 71).
More than 10 homologues of vertebrate hnRNP proteins have been
characterized in Drosophila melanogaster, the most abundant being hrp36, hrp40, and hrp48 (45). All hnRNPs described
in Drosophila share sequence homology with human hnRNP A
and B, containing two N-terminal RNP consensus (RNP-CS) RNA-binding
domains and a glycine-rich carboxy-terminal domain (43).
Drosophila hnRNP proteins have been shown to be
associated with the majority of nascent transcripts (44,
45). In vivo overexpression studies have established a role for
Drosophila hnRNP proteins in RNA processing. For
instance, overexpression of the hrp36 or hrp38 protein affects the
splice site selection of the dopa decarboxylase pre-mRNA (69, 88). Hammond et al. (24) have determined that the
hrp48 gene is required in vivo for splicing of the third
intron in the P transposable element. These authors have shown that
hypomorphic mutations in the hrp48 gene cause larval
lethality and developmental defects including reduced numbers of
ommatidia in the eye and bristle abnormalities. The
squid gene (encoding hrp40) is required for
dorsoventral axis formation during oogenesis (33, 65). Several additional Drosophila RNA-binding proteins with
RNP-CS motifs are required for diverse processes such as sex
determination, vision, behavior, and spermatogenesis (2, 4, 5, 23, 32).
Human hnRNP K is the major poly(rC)-binding protein
(46), and several features set it apart from other hnRNP
proteins. Unlike most other hnRNP proteins, nucleic acid binding by
hnRNP K is not mediated by an RNP-CS RNA-binding domain (reviewed
in reference 16); instead, it uses three repeat
motifs termed KH (K homology) domains (72, 74). Direct
competition studies reveal that hnRNP K preferentially binds
single-stranded DNA over single-stranded RNA in vitro (81),
and several groups have identified hnRNP K as a sequence-specific
DNA-binding protein, suggesting that it might be involved in
transcription (21, 29, 56, 81).
Here we report the expression pattern and biochemical properties of the
D. melanogaster homologue of vertebrate hnRNP K protein. Null and weak alleles of this gene called bancal
(bl) result in adults with shortened appendages. This
phenotype appears to result from a reduction in the number of cell
divisions in the imaginal discs. Elevated hnRNP K activity induces
cell death in imaginal discs, and expression of the antiapoptotic P35
protein suppresses this phenotype in the eye. We also present the first
in vivo evidence for a role of the human hnRNP K protein in gene
expression control. These observations indicate that a negative
feedback regulation mechanism of the bl gene controls the
amount of Bancal (Bl) protein produced.
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MATERIALS AND METHODS |
Fly strains and genetics.
Oregon R was used as a wild-type
standard. The enhancer trap line P(lac, w+)176
isolated in our laboratory is located cytologically at position 57A on
chromosome 2R and expresses
-galactosidase in the anterior region of
the embryo at the blastoderm stage. The P(lac,
w+) element is described in reference
6. Precise and imprecise excisions of this P element
were isolated by the jump start technique (64). For the
identification of bl mutant third-instar larvae, blV6 and blV4 were
introduced into a yellow
genetic background
and balanced with a chromosome carrying an yellow+ insertion. Mutants are identifiable by
their yellow
phenotype.
Cloning of the bl gene.
Cloning of the
bl gene was achieved by plasmid rescue (61) using
DNA isolated from the P(lac, w+)176 insertion.
Phages carrying overlapping genomic DNA fragments were isolated by
hybridization screening of an EMBL3 genomic library (Clontech) and
chromosomal walking. Genomic DNA fragments hybridizing to
poly(A)+ RNA on Northern blots were used to isolate clones
from a Zimm embryonic cDNA library. For Northern blot experiments,
poly(A)+ mRNAs were isolated from various developmental
stages by using a poly(A) tract isolation kit (Promega). Sequencing of
the cDNAs and the genomic fragments was done by Genome Express
(Grenoble, France), using synthetic primers. To analyze the extent of
the deletions generated after mobilization of the P element, Southern blot analysis was performed with the genomic DNA extracted from the
different mutant and parental strains. The genomic DNA was digested by
EcoRI, run on an agarose gel, transferred to a
nitrocellulose membrane, and probed with either the P(lac,
w+) DNA or different fragments of the genomic DNA
surrounding the insertion site.
Analysis of Bl protein.
Anti-Bl antibodies were made in rats
by injecting a histidine-tagged Bl fusion protein produced in bacteria;
the bl sequence used encodes for the C-terminal 433 amino
acids of the Bl protein. Proteins from various developmental stages
were extracted by homogenizing the tissue in the sample buffer (5 parts
S buffer:1 part D buffer; S-buffer is 0.2 M Tris [pH 6.8], 5 mM EDTA,
0.01% BBP, and 22% sucrose; D buffer is 18% sodium dodecyl sulfate
[SDS] and 0.5 M dithiothreitol) in the presence of protease
inhibitors (aprotinin, leupeptin, pepstatin A, antipain, and
phenylmethylsulfonyl fluoride; 1 mg/ml, final concentration). The
proteins were then separated on SDS-polyacrylamide (10%) gels,
transferred to nitrocellulose, and probed as described previously
(25). In situ immunodetection of the Bl protein was
performed with the anti-Bl antiserum at 1/500 dilution.
RNA binding assays.
Binding of in vitro-produced proteins to
ribohomopolymers was carried out essentially as described previously
(77), with minor modifications. Briefly, ribonucleotide
homopolymer (Pharmacia) binding reactions were carried out with 100,000 cpm of trichloroacetic acid-precipitable protein in a total of 0.5 ml
of binding buffer (10 mM Tris-HCl [pH 7.4], 2.5 mM MgCl2,
0.5% Triton X-100, 200 mM NaCl) for 10 min on a rocking platform at
4°C. The beads were pelleted with a brief spin in a microcentrifuge
and washed five times with binding buffer prior to resuspension in 50 µl of SDS-polyacrylamide gel electrophoresis (PAGE) sample buffer.
Bound proteins were eluted from the nucleic acid by boiling, resolved
on an SDS-polyacrylamide (12.5%) gel, and visualized by fluorography.
Transgenic lines and overexpression of the K proteins.
A
2.0-kb EcoRI fragment corresponding to the full-length
bl cDNA and a 2.3-kb EcoRI fragment encoding the
human hnRNP K protein (HK5 cDNA; a gift from G. Dreyfuss
[45]) were inserted in the EcoRI site of
the pCaSpeR-hs vector (80) and in the EcoRI site of the pUAST vector (7). The full-length bl cDNA
was cloned in the EcoRI polylinker site of pGMR
(26). hs-bl, hs-HK5,
pUAST-bl, pUAST-HK5, and pGMR-bl
transgenic flies were obtained by P-element-mediated transformation
(66). The Gal4 system was used to overexpress bl
and the human K gene (7), using the ptcGAL4
driver (7). Adult wings were dissected in 100% ethanol,
rinsed twice in xylene, mounted in DPX, and observed under a Zeiss
AxioPhot microscope using Nomarski optics. Samples for scanning
electron microscopy (SEM) were prepared as described in reference
34.
BrdU labeling, apoptosis assays, and cell size analysis.
Imaginal discs from third-instar larvae were dissected and placed in
Schneider's medium containing 5-bromo-2'-deoxyuridine (BrdU; 0.2 mg/ml; Sigma) for 30 min at room temperature. Tissues were then fixed
and stained as described previously (3). The anti-BrdU
antibody was from Dako. Apoptotic cells were detected as described
previously (76), using acridine orange (Sigma) at 1 µg/ml.
Cell size was determined using an Arm antibody (described below)
to stain the periphery of cells.
In situ hybridization and immunostaining on discs.
Discs
were dissected from both control and transgenic third-instar larvae in
Ringer's solution, fixed, and immunostained with anti-Bl antibody (see
above) (30). The human hnRNP K primary antibody was
kindly provided by G. Dreyfuss. The Teashirt (Tsh) antibody is
described in reference 22. A rat polyclonal antibody raised against glutathione S-transferase-Modulo (Mod) was
used (36). Arm N2 7A1 monoclonal antibody (Developmental
Studies Hybridoma Bank) (57) recognizes an epitope in the
amino-terminal part of the Arm protein. Secondary antibodies, either
fluorescein isothiocyanate or tetramethylrhodamine isothiocyanate
labeled, were from Jackson ImmunoResearch Laboratories (West Grove,
Pa.). Confocal microscopy was performed on a Zeiss confocal microscope, and data were processed with Adobe Photoshop.
In situ hybridization was performed with digoxigenin-labeled probes
(Boehringer). We used a full-length bl cDNA to detect bl RNA and a full-length mod cDNA to detect
mod RNA. After phosphatase alkaline detection, the discs
were mounted in 70% glycerol-100 mM Tris-HCl (pH 7.5) and observed
under a Zeiss AxioPhot microscope using Nomarski optics.
Sequence accession numbers.
The protein identification
numbers for the human, Xenopus, and Caenorhabditis
elegans hnRNP K clones are 585911, 542643, and 1707028, respectively. The bl GenBank accession number is AF142631.
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RESULTS |
Mutations in the bl gene.
From a viable
enhancer-trap line, P(lac, w+)176, that
cytologically maps to position 57A (33a), we generated
deletion mutations following mobilization of this P element (Materials
and Methods). From 370 w
excision events, 9 showed fully penetrant mutant, semiviable, adult phenotypes when
homozygous. Homozygotes or transheterozygotes for all mutations
affected the size of the adult appendages. Wings, legs, and eyes were
smaller than wild type (Fig. 1). The
mutations isolated fall into three classes (strong, weak, and nearly
wild type) based on the viability of alleles and their effects on the derivatives of imaginal discs (Table 1).
Because adult flies with a strong phenotype cannot walk and fall over,
we called these mutants bancal, which means "wobbly" in
French. Twenty to twenty-five percent of adult flies homozygous for
blv5 or blv6 or
blv6/blv4 transheterozygotes have
smaller than wild-type eyes. Observation of the descendants from the
different bl heterozygous flies shows that all homozygotes
survive to the second or third instar larval stage; 70 to 80% of
mutant individual survive to pupal or adult stages. We have also
removed maternal and zygotic bl+ function, by
making bl germ line clones (data not shown). Loss of
maternal bl product has no effect on the survival
characteristics of bl homozygotes (data not shown). The
bl mutant phenotype (Fig. 1) and the bl mutant
flies used in the rescue experiment described below are
blv6/blv4 transheterozygotes. Note
that the adult wing is the tissue most affected by the bl
mutations (Table 1).

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FIG. 1.
The reduction in size of adult appendages observed in
the blv6/blv4 mutant is rescued by
ubiquitous expression of Bl protein. The
blv6/blv4 mutant eyes (B), legs (E),
and wing (H) are smaller than wild type (A, D, and G).
blv6/blv4,
hsp70-bl/hsp70-bl flies show normal adult structures when
grown at 25°C (C, F, and I). Eyes were observed by SEM (A to C).
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The bl gene encodes a Drosophila homologue
of the vertebrate hnRNP K protein.
Genomic DNA flanking the 3'
end of the transposon P(lac, w+)176 was isolated
by plasmid rescue (61). Genomic phages were isolated,
allowing the isolation of 50 kb of genomic DNA surrounding the
insertion site (Fig. 2A). Mutant
and parental chromosomes were studied by Southern blot analysis
(data not shown). Because the distal breakpoint of the deficiencies
blv6 and blv5 has not
been characterized, we used a transheterozygous allelic combination,
blv6/blv4, in all the genetic
experiments described in this report. Several embryonic cDNA clones
were isolated by using a genomic DNA fragment flanking the P-element
insertion site as a probe. One of the longest cDNA clones (CR22)
detects mRNAs of about 1.9 and 2.1 kb during the first 10 h of
embryogenesis; only the larger transcript is detected during the later
stages of development (Fig. 2B). The cDNA CR22 (Fig.
3A) contains an open
reading frame (ORF) encoding a 490-amino-acid protein with a predicted
molecular weight of 53,900 and a predicted pI of 8.98. Another
differentially spliced form of bl transcript that produces
an abortive protein has been described (reference
17a and Fig. 3B). Database searches showed that the
Bl sequence has strong homology within three maxi-KH domain internal
repeats found in the human, Xenopus, and C. elegans hnRNP K proteins (Fig. 3A). The maxi-KH domain, an
extended classical KH domain (54), is found in the
prokaryotic RNase PNP (63), the Saccharomyces
cerevisiae meiosis-specific factor MER1 (55), the
Drosophila PSI (70) and Bicaudal-C proteins
(40), and the product of the human fragile X gene
FMR-1 (73) and the human Src substrate Sam 68 (20).

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FIG. 2.
Molecular analysis of bl. (A) Map of the
bl genomic region. Restriction sites are represented by
vertical bars, EcoRI sites above and XbaI sites
below. Breakpoints or deletions found in bl alleles are
indicated by shaded boxes. The location and polarity of the insertion
were determined by Southern blot and sequence analysis (data not
shown). Genomic phages are indicated. The triangle indicates the
P-element insertion site. (B) Northern blot analysis revealing
bl transcripts, using CR22 cDNA as a probe. mRNAs of 1.9 and 2.1 kb are detected during the first 10 h of embryogenesis (0 to 5 h, lane 1; 5 to 10 h, lane 2); only the larger
transcript is detected in the later stages of embryogenesis (lane 3),
in third-instar larvae (lane 4), and in adult females (lane 5). Each
lane contains 5 µg of poly(A)+ mRNA.
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FIG. 3.
The Bl protein is structurally and functionally
homologous to human K. (A) Amino acid sequence alignment between Bl and
human, Xenopus, and C. elegans K proteins.
Identicals amino acids are indicated by black boxes. The Bl protein has
a putative nuclear localization signal (NLS) in the N-terminal region
and three maxi-KH domains (KH1, KH2, and KH3; in yellow boxes). The KH3
domain is located in the C-terminal extremity of the protein and is
separated from the KH2 motif by a hinge region composed of 33% glycine
residues for Bl and 19% glycine and 16% proline residues for the
human hnRNP K protein. The KNS domain (50) present in
the human K protein is indicated. A putative M9 motif, responsible for
the shuttling activity of human hnRNP A1 and B2 proteins
(49), is present in the Bl protein (amino acids 272 to 319;
in blue). (B) Another differentially spliced form of bl
transcript produces an abortive protein. Shown is sequence alignment
between the bl cDNA CR22 and the EST (expressed sequence
tag) clone A1389318. The predicted ORFs of CR22 and the EST clone are
indicated. In italics are the amino acids that differs between the two
ORFs. The KH1 domain is underlined. (C and D) Binding of the Bl and
human K proteins to ribonucleotide homopolymers. The Bl protein and the
human K protein were produced by in vitro transcription-translation of
pBS-CR22 and pBS-HK5, respectively. An amount equivalent to 20% of the
material used for each binding reaction is shown in the lanes marked
Translation. The translated proteins were incubated with the indicated
ribonucleotide homopolymers in the presence of 200 mM NaCl, and bound
proteins were analyzed by SDS-PAGE as described previously
(73). Positions of the molecular mass markers are indicated
on the left. (E) Amino acid sequence comparison between the M9 motifs
identified in different organisms. Conserved residues are underlined.
The derived consensus is indicated below the sequence alignment. An
amino acid critical for the shuttling activity of the M9 motif is boxed
(49).
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Sequence homology strongly suggests that the
bl cDNA CR22
encodes the
Drosophila homologue of the vertebrate hnRNP
K protein.
First, the homology between the human and
Drosophila amino acid
sequences is not confined to the three
maxi-KH domains; sequence
similarity extends outside the second maxi-KH
domain (Fig.
3A;
see Discussion). Second, the positions of the KH
motifs are conserved
in the different species. Third, extensive
sequence analysis revealed
that the Bl maxi-KH domains are more
homologous to the human hnRNP
K maxi-KH domains than to those found
in other vertebrate KH domain-containing
proteins (data not shown). To
investigate whether Bl is functionally
as well as structurally similar
to human hnRNP K, we transcribed
and translated the Bl cDNA in the
presence of [
35S]methionine and assayed the affinity of
the protein for different
RNA homopolymers immobilized on agarose
beads. This assay has
been useful in assessing RNA binding for many
other RNA-binding
proteins (
34,
73,
77). In the presence of
200 mM NaCl, Bl
shows strong binding to poly(rC), very little binding
to poly(rG)
and poly(rU), and no binding to poly(rA) (Fig.
3C). Human
hnRNP
K protein has the same RNA-binding profile as Bl (Fig.
3D).
Taken
as whole, these data show that Bl protein is a
Drosophila homologue
of the vertebrate hnRNP K
protein.
Both Drosophila and human K proteins can rescue the
bl mutations when expressed ubiquitously.
To confirm
that the identified transcription unit corresponds to the bl
gene, we performed rescue experiments in which transgenic flies
carrying the CR22 cDNA under control of the heat shock-inducible hsp70 promoter were combined with
blv4/blv6 transheterozygotes. In the
absence of the transgene, only 10% of the expected number of
blv4/blv6 transheterozygotes
survived to adulthood at 25°C (Table 1). Due to weak and leaky
activity of the hsp70 promoter at 25°C, 62% of
blv4/blv6 transheterozygotes
carrying the transgene gave fully viable adults. In addition, the
blv4/blv6 mutant phenotype is
rescued (Fig. 1). Similar results were obtained with a
hsp70-driven human hnRNP K transgene (Table 1). This
rescue experiment is highly sensitive to growth temperature. At 29°C almost 100% of the blv4/blv6
transheterozygotes carrying the transgenes die during the second or
third instar larval stage, most likely because of higher leakage of the
hsp70 promoter at this temperature. This observation
suggests that the amount of K protein synthesis is critical for the
normal development of the flies (see Discussion). In summary, the CR22 cDNA isolated corresponds to the bl gene genetically
characterized by the bl mutations. Moreover, these results
show that the human K protein and Drosophila Bl protein are
functionally homologous.
Analysis of Bl expression.
Rats were immunized to obtain
polyclonal antiserum specific to the Drosophila Bl protein.
Western blot analysis shows that this antiserum recognizes a single
protein with a molecular mass of 54 kDa at all stages examined (Fig.
4A). To assess the effects of different
bl mutations on protein production, Western blot analysis
was performed with imaginal tissue homozygous or heterozygous for
different bl alleles (Fig. 4A and B). Bl is undetectable in blv6 (or blv5 not shown)
homozygotes, confirming that these are null alleles (Fig. 4A, lane 5).
Bl is still detected, but at a lower than wild-type level, in
blv4/blv6 larvae (Fig. 4A, lane 4)
or in the weak bl alleles blv10 and
blv4 (data not shown).

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FIG. 4.
Analysis of Bl expression. (A and B) The Bl antiserum is
specific for the bl gene product, and
blv6/blv4 mutant imaginal discs have
a reduced amount of the Bl protein. (A) Equal amounts of protein
extracted from wild-type ovaries (1), wild-type embryos
(2), and wild-type (3) or
blv6/blv4 (4) or
blv6/blv6 (5) mutant
imaginal discs were resolved by SDS-PAGE and transferred to a
nitrocellulose membrane. The bl antiserum detects a single
54-kDa protein among proteins prepared from all tissues except proteins
prepared from blv6/blv6 (lane 5)
mutant imaginal discs. Bl is still detected in
blv6/blv4 imaginal discs (lane 4)
but at a lower than wild-type level (lane 3). (B) Ponceau S staining of
the nitrocellulose membrane immunoblotted by Bl antiserum in panel A. (C to F) Immunodetection of the Bl protein during embryogenesis. (C)
Preferential cytoplasmic localization of Bl, syncytial blastoderm,
cycle 12. (D) Nuclear and cytoplasmic localization, cellular
blastoderm, cycle 13. Cytoplasmic staining is indicated by a thin
arrow. Note that the Bl protein is present in the cytoplasm but not in
the nucleus of the pole cells at this stage (thick arrow). (E) Nuclear
localization, cellular blastoderm, cycle 14. (F) Embryo at stage 9 during germ band elongation. Bl is weakly detected in cells undergoing
mitosis (indicated by asterisks) (19); the long arrow
indicates the nuclear staining of amnioserosa cells in panel F. In all
views, anterior is left and dorsal is uppermost. (C and D) Confocal
sections of the posterior region of the embryo; (E and F) optical
views.
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The pattern of Bl protein distribution during the early stages of
embryogenesis is illustrated in Fig.
4C to F. Bl shows a
dynamic
redistribution from the cytoplasm to the nuclei at the
time of the
initiation of massive zygotic transcription in early
embryos. Fixed
embryos of the nuclear cycles 10-12 (
18) are
characterized
by strong cytoplasmic staining (Fig.
4C). In contrast,
embryos of cycle
14 showed exclusively nuclear Bl signal (Fig.
4E), whereas cycle 13 embryos were clearly in transition, demonstrating
examples of both
patterns (Fig.
4D). From cycle 14 through the
rest of embryogenesis and
in larvae imaginal discs, the protein
is found in all interphase nuclei
without any preferential tissue
distribution (not shown). Bl is weakly
detected in cells undergoing
mitosis (Fig.
4F), likely because of the
absence of transcription
during cell division and dilution of Bl
product all over the cell.
In summary, the dynamic redistribution of Bl
during early development
and/or mitosis coincides with the
transcription activity of the
cell, as described previously
(
8). These observations are also
true for other components
of nuclear RNP complexes like the Sm
proteins of splicing snRNPs and
the
Drosophila hnRNP A and B groups
(
15,
68).
Mutations of the Drosophila hnRNP K gene slow down
cell division.
The reduction in size of imaginal structures caused
by bl mutations could result from an excess of programmed
cell death, fewer cell divisions, and/or a reduction in size of
imaginal cells. We have stained mutant imaginal discs with acridine
orange to visualize apoptotic cells: no difference in cell death was
observed between wild-type and bl mutant wing imaginal discs
at the third instar stage (Fig. 5A and
B). Careful inspection of cell size does not reveal any obvious
differences between wild-type and bl wing mutant imaginal
cells (Fig. 5C and D). However, following incorporation of BrdU, we
observed that bl mutant imaginal discs show a significant
reduction of cells stained with BrdU compared to the wild-type
situation (Fig. 5E to H). Incorporation of BrdU occurs during the S
phase of the cell cycle when DNA is replicated. Consequently, BrdU
staining is an indirect marker of cellular proliferation in a given
tissue. In the late third-instar larva, the distribution of
BrdU-labeled cells is nonuniform (82). Some regions of the
discs contain nonlabeled cells like the zone of nonproliferating cells
(the ZNC band) and the M stripe, while other domains of the disc
contain strongly labeled nuclei such as the notum region. We found that
all bl mutant imaginal discs examined at the third-instar
larvae displayed less BrdU-labeled nuclei than wild-type imaginal
discs. Figure 5F illustrates a bl mutant third-instar larvae
wing imaginal disc with a particularly strong reduction of BrdU
staining in the notum region (Fig. 5H). Note that the regions of the
bl mutant disc showing less intense BrdU staining vary from
one disc to another (data not shown). In summary, our observations
suggest that bl mutant discs proliferate less actively than
wild-type discs.

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FIG. 5.
Cell proliferation is reduced in
blv6/blv4 mutant imaginal discs.
Apoptotic cells were stained with acridine orange in wild-type (A) and
blv6/blv4 mutant (B) wing imaginal
discs. Arrows in panels A and B indicate acridine orange-positive
cells. Inspection of cell size does not reveal any obvious differences
between wild-type (C) and blv6/blv4
mutant (D) imaginal discs. Panels D and C correspond to a magnification
of the wing blade. (E and F) Imaginal discs from late third instar were
labeled with BrdU and stained with anti-BrdU antibodies. The number of
fluorescent nuclei reflects the number and distribution of cells in S
phase. A significant reduction in the number of BrdU-positive cells is
seen in blv6/blv4 third-instar wing
discs (F) compared to wild-type discs (E). Arrows indicate the ZNC, and
the notum region is boxed. (G and H) Magnifications of the boxed
regions in panels E and F, respectively.
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Overexpression of either the Drosophila or human
hnRNP K protein induces cell death.
To gain more insight into
the function of the K proteins, we studied the consequences of
overexpression of either the Drosophila Bl protein or its
human counterpart hnRNP K in Drosophila imaginal discs.
We constructed flies carrying UAS-bl and UAS-HK5
(human hnRNP K) transgenes in order to target the expression of Bl
to specific cells (7). Ubiquitous and high-level expression
of K proteins is lethal to flies (see above). Under ptcGAL4
regulation, we targeted UAS-bl or UAS-HK5
expression in a band of cells just anterior to the anteroposterior
boundary in most imaginal discs, focusing at the third instar larval
stage (Fig. 6A). These mutant flies
display loss of some adult epidermal structures, corresponding to the
domain of imaginal discs which overexpresses the K proteins. For
instance, the intervein tissue, located between veins 3 and 4 of the
wings, is reduced in size and the anterior cross-vein is missing (Fig.
6B to D). The absence of epidermal structures in flies overexpressing K
could result from excessive cell death during the larval and/or pupal
stages. Therefore, we investigated the pattern of cell death in these
mutant discs. Normally there is little detectable cell death in the
imaginal discs during the larval life. Extensive cell death, however,
correlates with the site of overproduction of K proteins (Fig. 6E to
G). Similarly, the expression of reaper (rpr),
which encodes an effector of programmed cell death in
Drosophila (27, 85), is expressed ectopically in
cells overexpressing the K proteins (Fig. 6H to J).

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FIG. 6.
High levels of hnRNP K proteins induce apoptosis.
(A) Immunodetection of the Bl protein in
ptcGAL4/UAS-bl wing imaginal disc. The experiment
was performed using the anti-Bl antiserum at 1/2,000 dilution to detect
only Bl-overexpressing cells. Bl is immunodetected in cells located in
a band just anterior (ant) to the anteroposterior boundary. A similar
distribution of the human K protein is observed in
ptcGAL4/UAS-HK5 wing disc immunostained with
mouse monoclonal anti-human K antibody (Fig. 8). post, posterior. (B to
D) Wings of wild-type flies (B) or wings of flies overexpressing the
Drosophila (C) or the vertebrate (D) K protein under
ptcGAL4 regulation lack adult structures. Note the absence
of the anterior cross-vein (arrow) and the reduction in size of the
intervein tissue between veins 3 and 4 (black dot). These structures
originate from the domain that overexpresses the K proteins in imaginal
discs (A). (E to G) Apoptotic cells were stained with acridine orange
in a wild-type wing imaginal disc (E) and a
ptcGAL4/UAS-bl (F) or
ptcGAL4/UAS-HK5 (G) wing disc. (H and I)
Digoxigenin-labeled rpr cDNA was hybridized to fixed
wild-type wing imaginal disc (H) and a
ptcGAL4/UAS-bl (I) or a
ptcGAL4/UAS-HK5 (J) wing disc. The
rpr probe hybridizes to regions that probably overexpress
the K proteins.
|
|
Expression of the antiapoptotic P35 protein suppresses the
phenotype of Bl overexpression in the eye.
It has been shown that
ectopic expression of the baculovirus P35 protein, which acts as an
inhibitor of ICE proteases (9), inhibits both normal and
induced apoptosis in the Drosophila eye imaginal discs
(26). To further confirm that high levels of hnRNP K
protein induce cell death, we targeted the expression of Bl in the
Drosophila eye by using a pGMR-bl construct and
then investigated the consequence of P35 coexpression. Expression of the pGMR transgenes is directed by the developmentally regulated Glass
transcription factor in cells in, and posterior to, the morphogenetic
furrow of the eye imaginal disc (53). Four independent transgenic P(GMR-bl; w+) lines were generated,
and no phenotypic difference was observed between the different lines.
By SEM, the eyes of flies carrying GMR-bl transgenes
appeared normal (data not shown). A second chromosome carrying two
copies of P(GMR-bl; w+) was constructed after
recombination and designated GMR-bl2. Eyes of
heterozygotes for this chromosome are reduced in size and highly
disorganized (Fig. 7A). Inspection of
GMR-bl2/+ eye by SEM revealed that
interommatidial bristles are mislocated. As expected, eye imaginal
discs from GMR-bl2/+ flies display a significant
increase in the amount of cell death posterior to the furrow (Fig. 7C),
while wild-type eye discs show very few apoptotic cells (Fig. 7D).
Note that extensive acridine orange staining is observed only in the
very posterior region of the eye disc despite the fact that the level
of ectopic Bl expression was constant from the furrow to the posterior
end of the disc at this stage (data not shown). It seems that there is a time delay between the onset of Bl expression and the appearance of
cell death, and apparently the only defect resulting from high levels
of Bl expression in postmitotic cells is cell death. To test if P35 can
suppress the GMR-bl2 phenotype,
GMR-bl2/+ flies were crossed with GMR-P35 flies.
Flies heterozygous for both GMR-bl2 and GMR-P35
have eyes very similar in size and organization to a wild-type eye
(Fig. 7E). We conclude that cell death is the major cellular defect
caused by high levels of Bl expression.

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|
FIG. 7.
P35 is a suppressor of the phenotype of Bl
overexpression in the eye. (A and B) Scanning electron micrographs of
GMR-bl2/+ (A) and GMR-P35/+ (B) eyes. (C) High
levels of Bl protein in postmitotic cells of the eye lead to increased
apoptosis visualized by acridine orange staining (C). (D) Wild-type eye
imaginal disc stained with acridine orange. Very little cell death
occurs posterior to the morphogenetic furrow (arrows in panels C and D)
in a wild-type eye disc. (E) Scanning electron micrograph of a
GMR-bl2/+; GMR-P35/+ eye.
|
|
The human K protein negatively regulates expression of the
bl gene in vivo.
Because high levels of K protein
cause cell death, we thought that the amount of K protein synthesized
must be tightly regulated. One possibility is that K protein acts as
its own negative regulator in a dose-sensitive manner (a dose-sensitive
negative feedback loop). Since the Drosophila and vertebrate
K proteins are functionally conserved, high levels of human K protein
would be expected to negatively regulate the production of the Bl
protein. To test this hypothesis, ptcGAL4/UAS-HK5
discs were double labeled with specific antibodies to immunodetect the
Drosophila and human K proteins. Drosophila K
protein was detected in the nuclei of all cells of wild-type wing discs
of third-instar larvae (data not shown). Confocal analysis revealed
that no Bl protein is detected in cells expressing high levels of the
human K protein (Fig. 8A and B). Notably,
Bl was weakly detected in cells expressing low levels of human K
protein (Fig. 8B). However, overexpression of the K proteins did not
affect the nucleoplasmic accumulation of the Tsh protein (Fig. 8C)
(1) and the nucleolar expression of the Mod protein (Fig.
8D) (36), showing that cells overexpressing Bl are not
generally deficient in protein expression. To determine the level at
which this regulation occurs, we investigated the consequences of high
levels of human K protein production on the level of the
Drosophila bl mRNA detected by in situ hybridization. In
situ hybridization to ptcGAL4/UAS-HK5 wing
imaginal discs, using bl as a probe, reveals that
Drosophila hnRNP K transcripts are not detected in the
ptcGAL4/UAS-HK5 domain (Fig. 8E). Since cell
death is observed following high levels of K protein production, it is
feasible that no transcription was occurring in the
ptcGAL4/UAS-HK5-expressing domain. However, this
is unlikely since mod mRNA is present at wild-type
levels (Fig. 8F) and tsh transcript levels are unaffected in
the ptcGAL4 domain (data not shown). These results
demonstrate that the human K protein functions in vivo in
Drosophila as a direct or indirect negative regulator of
bl gene expression and that the regulatory effect depends on
the amount of hnRNP K expressed.

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|
FIG. 8.
The human K protein negatively regulates expression of
the bl gene. Wing imaginal discs of
ptcGAL4/UAS-HK5 third-instar larvae were double
stained with anti-human K protein (red) and anti-Bl (green) (A and B),
anti-human K protein (red) and anti-Tsh (green) (C), or anti-human K
protein (red) and anti-Mod (green) (D). (A and B) Bl is detected in the
nuclei of all cells except those expressing the human K protein. Note
that like Bl, the human K protein is detected essentially in the
nucleus. The arrow in panel B indicates cells expressing both the
vertebrate and Drosophila K proteins. Overexpression of the
human K protein has no detectable effect on the immunodetection of the
Tsh (expressed only in the proximal region of the disc) (C) or Mod (D)
protein. Digoxigenin-labeled bl cDNA (E) and mod
cDNA (F) were hybridized to fixed ptcGAL4/UAS-HK5
wing imaginal discs. bl transcript is not detected in a band
of cells along the anterior-posterior boundary of Gal4-expressing cells
(E). Ubiquitous expression of mod transcript is not affected
in ptcGAL4/UAS-HK5 wing imaginal discs (F).
|
|
 |
DISCUSSION |
Bl is the Drosophila homologue of the human hnRNP K
protein.
We have cloned the gene, bl, that encodes the
Drosophila homologue of the vertebrate hnRNP K protein.
Using an hsp70 promoter-driven Drosophila or
human hnRNP K transgene, we have been able to rescue a weak
bl phenotype. Although we were able to only partially rescue the bl mutant phenotype, the functional equivalence of human
hnRNP K and Drosophila bl in the rescue assays strongly
argues in favor of a conserved functional homology between Bl and the
human hnRNP K protein.
The human and
Drosophila K proteins have highest
sequence similarity within their KH domains (KH1, 34% identity;
KH2, 34%
identity; KH3, 44% identity), and Bl preferentially
binds poly(rC)
in vitro. Dejgaard and Leffers (
12) reported
that KH3 is responsible
for the in vitro poly(rC)-binding activity of
human K, while the
two other KH motifs act as nonspecific RNA-binding
domains. Our
observations reinforce the idea that the KH3 domain is
critical
for RNA-binding specificity of K protein because of its strong
conservation throughout evolution. The conservation of a block
of amino
acids immediately adjacent to the second maxi-KH domain
also suggests
that this region is functionally relevant for the
hnRNP K proteins.
This region partially overlaps the binding domain
of human hnRNP K
to the transcriptional repressor Zik1 (
14)
(Fig.
3), and we
found that Bl interacts in vitro with the human
Zik1 protein (data not
shown) probably through this conserved
domain.
Human hnRNP K protein contains a specific domain, the KNS
(hnRNP K nuclear shuttling) domain (
50), that promotes
bidirectional
transport through the nuclear pore complex. This KNS
domain lacks
the Bl protein. An M9 motif, responsible for the shuttling
activity
of human A1 and A2/B1 hnRNP between the nucleus and the
cytoplasm
(
49), is present upstream of the third maxi-KH
domain in Bl
(Fig.
3A and E). The presence of such a motif in Bl
supports the
idea that the
Drosophila hnRNP K protein is
a member of the hnRNP
family. Note that the M9 motif is conserved
in other
Drosophila hnRNP proteins (
75).
The level of hnRNP K protein is critical for cell
survival.
We found that mutations in the bl gene cause
developmental defects of imaginal disc derivatives (Fig. 1).
Hypomorphic bl mutants, which express low levels of Bl
protein (Fig. 4A, lane 4), give rise to adults with shortened
appendages, probably due to less active cell proliferation compared to
wild-type levels (Fig. 5F). Imaginal discs contain cells which normally
progress through the four phases of the cell cycle (G1, S,
G2, and M) (reviewed in reference 17).
Because cells maintain a constant size as they proliferate, cell growth
appears to be a limiting factor in the division of the imaginal cells
(17, 39). In bl mutant discs, the imaginal cells
are able to grow to a normal size (Fig. 5D). However, the reduction of
the number of cells in S phase suggests that proliferation is less
active than in wild-type flies. In conclusion, we propose that
bl imaginal cells grow more slowly than wild-type cells.
Several lines of evidence suggest that the human hnRNP K protein
has functions which are linked to the cell cycle. First,
hnRNP K
protein has been found to be upregulated in human simian
virus
40-transformed keratinocytes compared to normal proliferating
keratinocytes (
13). Second, hnRNP K is associated in
vivo with
several members of the Src protein tyrosine kinase family
(
79,
83,
84). Third, the human hnRNP K can bind and
activate the
human c-
myc promoter (
78). However,
during our work, we found
that overexpressing K proteins does not
affect the transcription
of the d-
myc gene in vivo (data not
shown). Finally, because the
bl gene encodes an hnRNP
protein, it is more likely that pre-mRNA
biogenesis is affected in
bl mutant flies. It is therefore possible
that the
bl mutant cells grow slowly because of defective
pre-mRNA
processing. Interestingly, mutations in housekeeping genes
such
as ribosomal genes cripple protein synthesis and have a dominant
effect of slowing growth (reviewed in reference
37).
Negative regulation of bl gene expression.
The
expression level of hnRNP proteins is critical for their normal
function (10, 31, 69, 86, 87), and here we have shown that
overexpression of Drosophila and human K proteins in imaginal discs promotes cell death, as demonstrated by the increased number of acridine orange-positive cells (Fig. 6E to F) and the induction of rpr gene expression (Fig. 6H to J). Thus, it is
very likely that the expression level of hnRNP K proteins is
tightly regulated. We found that high levels of the human hnRNP K
protein negatively regulate the expression of the bl gene,
as demonstrated by the absence of Bl protein (Fig. 8B) and
bl mRNA (Fig. 8E) in cells overexpressing the human K
protein. Notably, a lower level of Bl protein is detected in cells
weakly expressing the human K protein (arrow in Fig. 8B), suggesting
that the vertebrate hnRNP K protein is able to repress, probably in
a dose-sensitive manner, the expression of the bl gene. Two
observations argue in favor of regulation at the transcriptional rather
than posttranscriptional level. First, no bl transcripts are
detected in cells overexpressing the human K protein (Fig. 8E); second,
when expressed under the control of a heterologous promotor (the
UAS-TATA promoter), the human and Drosophila K proteins are
always highly expressed without any modulation in protein synthesis. In
fact, many groups have reported that the human K protein can bind DNA
to both activate and repress RNA polymerase II promoters (21, 29,
38, 48, 51, 52, 54, 81). However, we cannot exclude the
possibility that overexpression of the human K protein affects either
the stability, splicing, or nuclear export of the bl
mRNA, since any of these mechanisms of regulation may affect
transcript abundance.
Based on functional conservation between the vertebrate and
Drosophila K proteins, we imagine that the Bl protein acts
to
negatively regulate its own expression, allowing us to propose
the
existence of negative feedback regulation for
bl gene
expression.
Such a regulatory mechanism has been proposed for many
genes in
Drosophila (
28,
41,
42,
67). For
example, two mRNAs encoding
transformer-2
(
tra-2) are produced in the male germ line that
differ from
each other only by the retention of intron 3 (nonfunctional
mRNA)
or removal by splicing of intron 3 (functional mRNA)
(
42).
It has been proposed that the Tra-2 protein limits its
own synthesis
by repressing the splicing of intron 3 (
42).
Additionally, the
cyclin E protein is required directly or indirectly
to shut off
its own expression in endoreplicating tissues of the
Drosophila embryo (
67). Because overexpression of
Bl is lethal, we speculate
that such a regulatory mechanism has evolved
for tight control
of the level of Bl
expression.
 |
ACKNOWLEDGMENTS |
We thank Gideon Dreyfuss and Matthew Michael for the human
hnRNP K cDNA and the human K protein antibody. We gratefully
acknowledge Sara Nakielny, Haruhiko Siomi, and Wes Friesen for critical
comments on the manuscript.
This work was funded by the Centre National de la Recherche
Scientifique and the Association de la Recherche contre le Cancer (ARC). B.C. received grants from the Ministère de la Recherche et
de la Technologie and the ARC.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: LGPD-IBDM,
Université de la Méditerrannée, Campus de Luminy,
Case 907, 13288 Marseille Cedex 09, France. Phone: 33-4-9182-9424. Fax:
33-4-9182-0682. E-mail: vola{at}ibdm.univ-mrs.fr.
Present address: Howard Hughes Medical Institute, Department of
Biochemistry and Biophysics, University of Pennsylvania School of
Medicine, Philadelphia, PA 19104-6148.
 |
REFERENCES |
| 1.
|
Alexandre, E.,
Y. Graba,
L. Fasano,
A. Gallet,
L. Perrin,
P. De Zulueta,
J. Pradel,
S. Kerridge, and B. Jacq.
1996.
The Drosophila Teashirt homeotic protein is a DNA-binding protein and modulo, a HOM C regulated modifier of variegation, is a likely candidate for being a direct target gene.
Mech. Dev.
59:191-204[Medline].
|
| 2.
|
Amrein, H.,
M. Gorman, and R. Nothiger.
1988.
The sex-determining gene tra-2 of Drosophila encodes a putative RNA binding protein.
Cell
55:1025-1035[Medline].
|
| 3.
|
Baker, N. E., and G. M. Rubin.
1992.
Ellipse mutations in the Drosophila homologue of the EGF receptor affect pattern formation, cell division, and cell death in eye imaginal discs.
Dev. Biol.
150:381-396[Medline].
|
| 4.
|
Bell, L. R.,
E. M. Maine,
P. Schedl, and T. W. Cline.
1988.
Sex-lethal, a Drosophila sex determination switch gene, exhibits sex-specific RNA splicing and sequence similarity to RNA binding proteins.
Cell
55:1037-1046[Medline].
|
| 5.
|
Bellen, H. J.,
S. Kooyer,
D. D'Evelyn, and J. Pearlman.
1992.
The Drosophila couch potato protein is expressed in nuclei of peripheral neuronal precursors and shows homology to RNA-binding proteins.
Genes Dev.
6:2125-2136[Abstract/Free Full Text].
|
| 6.
|
Bier, E.,
H. Vaessin,
S. Shepherd,
K. Lee,
K. McCall,
S. Barbel,
L. Ackerman,
R. Carretto,
T. Uemura,
E. Grell, et al.
1989.
Searching for pattern and mutation in the Drosophila genome with a P-lacZ vector.
Genes Dev.
3:1273-1287[Abstract/Free Full Text].
|
| 7.
|
Brand, A. H., and N. Perrimon.
1993.
Targeted gene expression as a means of altering cell fates and generating dominant phenotypes.
Development
118:401-415[Abstract].
|
| 8.
|
Buchenau, P.,
H. Saumweber, and D. J. Arndt-Jovin.
1997.
The dynamic nuclear redistribution of an hnRNP K-homologous protein during Drosophila embryo development and heat shock. Flexibility of transcription sites in vivo.
J. Cell Biol.
137:291-303[Abstract/Free Full Text].
|
| 9.
|
Bump, N. J.,
M. Hackett,
M. Hugunin,
S. Seshagiri,
K. Brady,
P. Chen,
C. Ferenz,
S. Franklin,
T. Ghayur,
P. Li, et al.
1995.
Inhibition of ICE family proteases by baculovirus antiapoptotic protein p35.
Science
269:1885-1888[Abstract/Free Full Text].
|
| 10.
|
Caceres, J. F.,
S. Stamm,
D. M. Helfman, and A. R. Krainer.
1994.
Regulation of alternative splicing in vivo by overexpression of antagonistic splicing factors.
Science
265:1706-1709[Abstract/Free Full Text].
|
| 11.
|
Choi, Y. D.,
P. J. Grabowski,
P. A. Sharp, and G. Dreyfuss.
1986.
Heterogeneous nuclear ribonucleoproteins: role in RNA splicing.
Science
231:1534-1539[Abstract/Free Full Text].
|
| 12.
|
Dejgaard, K., and H. Leffers.
1996.
Characterisation of the nucleic-acid-binding activity of KH domains. Different properties of different domains.
Eur. J. Biochem.
241:425-431[Medline].
|
| 13.
|
Dejgaard, K.,
H. Leffers,
H. H. Rasmussen,
P. Madsen,
T. A. Kruse,
B. Gesser,
H. Nielsen, and J. E. Celis.
1994.
Identification, molecular cloning, expression and chromosome mapping of a family of transformation upregulated hnRNP-K proteins derived by alternative splicing.
J. Mol. Biol.
236:33-48[Medline].
|
| 14.
|
Denisenko, O. N.,
B. O'Neill,
J. Ostrowski,
I. Van Seuningen, and K. Bomsztyk.
1996.
Zik1, a transcriptional repressor that interacts with the heterogeneous nuclear ribonucleoprotein particle K protein.
J. Biol. Chem.
271:27701-27706[Abstract/Free Full Text].
|
| 15.
|
Dequin, R.,
H. Saumweber, and J. W. Sedat.
1984.
Proteins shifting from the cytoplasm into the nuclei during early embryogenesis of Drosophila melanogaster.
Dev. Biol.
104:37-48[Medline].
|
| 16.
|
Dreyfuss, G.,
M. J. Matunis,
S. Pinol-Roma, and C. G. Burd.
1993.
hnRNP proteins and the biogenesis of mRNA.
Annu. Rev. Biochem.
62:289-321[Medline].
|
| 17.
|
Edgar, B. A., and C. F. Lehner.
1996.
Developmental control of cell cycle regulators: a fly's perspective.
Science
274:1646-1652[Abstract/Free Full Text].
|
| 17a.
| Fly base. 1993-1997, copyright date. [Online.]
The Drosophila genetic database. Genetics Society of America.
http://flybase.bio.indiana.edu. [7 May 1999, last date accessed.]
|
| 18.
|
Foe, V. E., and B. M. Alberts.
1983.
Studies of nuclear and cytoplasmic behaviour during the five mitotic cycles that precede gastrulation in Drosophila embryogenesis.
J. Cell Sci.
61:31-70[Abstract].
|
| 19.
|
Foe, V. E.
1989.
Mitotic domains reveal early commitment of cells in Drosophila embryos.
Development
107:1-22[Abstract].
|
| 20.
|
Fumagalli, S.,
N. F. Totty,
J. J. Hsuan, and S. A. Courtneidge.
1994.
A target for Src in mitosis.
Nature
368:871-874[Medline].
|
| 21.
|
Gaillard, C.,
E. Cabannes, and F. Strauss.
1994.
Identity of the RNA-binding protein K of hnRNP particles with protein H16, a sequence-specific single strand DNA-binding protein.
Nucleic Acids Res.
22:4183-4186[Abstract/Free Full Text].
|
| 22.
|
Gallet, A.,
A. Erkner,
B. Charroux,
L. Fasano, and S. Kerridge.
1998.
Trunk-specific modulation of Wingless signalling in Drosophila by Teashirt binding to Armadillo.
Curr. Biol.
8:893-902[Medline].
|
| 23.
|
Goralski, T. J.,
J. E. Edstrom, and B. S. Baker.
1989.
The sex determination locus transformer-2 of Drosophila encodes a polypeptide with similarity to RNA binding proteins.
Cell
56:1011-1018[Medline].
|
| 24.
|
Hammond, L. E.,
D. Z. Rudner,
R. Kanaar, and D. C. Rio.
1997.
Mutations in the hrp48 gene, which encodes a Drosophila heterogeneous nuclear ribonucleoprotein particle protein, cause lethality and developmental defects and affect P-element third-intron splicing in vivo.
Mol. Cell. Biol.
17:7260-7267[Abstract].
|
| 25.
|
Harlow, E., and D. Lane.
1988.
Antibodies: a laboratory manual.
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
|
| 26.
|
Hay, B. A.,
T. Wolff, and G. M. Rubin.
1994.
Expression of baculovirus P35 prevents cell death in Drosophila.
Development
120:2121-2129[Abstract].
|
| 27.
|
Hay, B. A.,
D. A. Wassarman, and G. M. Rubin.
1995.
Drosophila homologs of baculovirus inhibitor of apoptosis proteins function to block cell death.
Cell
83:1253-1262[Medline].
|
| 28.
|
Hepker, J.,
Q. T. Wang,
C. K. Motzny,
R. Holmgren, and T. V. Orenic.
1997.
Drosophila Cubitus Interruptus forms a negative feedback loop with Patched and regulates expression of Hedgehog target genes.
Development
124:549-558[Abstract].
|
| 29.
|
Ito, K.,
K. Sato, and H. Endo.
1994.
Cloning and characterization of a single-stranded DNA binding protein that specifically recognizes deoxycytidine stretch.
Nucleic Acids Res.
22:53-58[Abstract/Free Full Text].
|
| 30.
|
Johnston, L. A., and G. Schubiger.
1996.
Ectopic expression of wingless in imaginal discs interferes with decapentaplegic expression and alters cell determination.
Development
122:3519-3529[Abstract].
|
| 31.
|
Kamma, H.,
D. S. Portman, and G. Dreyfuss.
1995.
Cell type-specific expression of hnRNP proteins.
Exp. Cell Res.
221:187-196[Medline].
|
| 32.
|
Karsch-Mizrachi, I., and S. R. Haynes.
1993.
The Rb97D gene encodes a potential RNA-binding protein required for spermatogenesis in Drosophila.
Nucleic Acids Res.
21:2229-2235[Abstract/Free Full Text].
|
| 33.
|
Kelley, R. L.
1993.
Initial organization of the Drosophila dorsoventral axis depends on an RNA-binding protein encoded by the squid gene.
Genes Dev.
7:948-960[Abstract/Free Full Text].
|
| 33a.
| Kerridge, S. Unpublished data.
|
| 34.
|
Kiledjian, M., and G. Dreyfuss.
1992.
Primary structure and binding activity of the hnRNP U protein: binding RNA through RGG box.
EMBO J.
11:2655-2664[Medline].
|
| 35.
|
Kimmel, B. E.,
U. Heberlein, and G. M. Rubin.
1990.
The homeo domain protein Rough is expressed in a subset of cells in the developing Drosophila eye where it can specify photoreceptor cell subtype.
Genes Dev.
4:712-727[Abstract/Free Full Text].
|
| 36.
|
Krejci, E.,
V. Garzino,
C. Mary,
N. Bennani, and J. Pradel.
1989.
Modulo, a new maternally expressed Drosophila gene encodes a DNA-binding protein with distinct acidic and basic regions.
Nucleic Acids Res.
17:8101-8115[Abstract/Free Full Text].
|
| 37.
|
Lambertsson, A.
1998.
The minute genes in Drosophila and their molecular functions.
Adv. Genet.
38:69-134[Medline].
|
| 38.
|
Lee, M. H.,
S. Mori, and P. Raychaudhuri.
1996.
Trans-activation by the hnRNP K protein involves an increase in RNA synthesis from the reporter genes.
J. Biol. Chem.
271:3420-3427[Abstract/Free Full Text].
|
| 39.
|
Madhavan, M., and H. A. Schneiderman.
1977.
Histological analysis of the dynamics of growth of imaginal discs and histoblast nests during the larval development of Drosophila melanogaster.
Roux's Arch. Dev. Biol.
183:269.
|
| 40.
|
Mahone, M.,
E. E. Saffman, and P. F. Lasko.
1995.
Localized Bicaudal-C RNA encodes a protein containing a KH domain, the RNA binding motif of FMR1.
EMBO J.
14:2043-2055[Medline].
|
| 41.
|
Marrus, S. B.,
H. Zeng, and M. Rosbash.
1996.
Effect of constant light and circadian entrainment of perS flies: evidence for light-mediated delay of the negative feedback loop in Drosophila.
EMBO J.
15:6877-6886[Medline].
|
| 42.
|
Mattox, W.,
M. E. McGuffin, and B. S. Baker.
1996.
A negative feedback mechanism revealed by functional analysis of the alternative isoforms of the Drosophila splicing regulator Transformer-2.
Genetics
143:303-314[Abstract].
|
| 43.
|
Matunis, E. L.,
M. J. Matunis, and G. Dreyfuss.
1992.
Characterization of the major hnRNP proteins from Drosophila melanogaster.
J. Cell Biol.
116:257-269[Abstract/Free Full Text].
|
| 44.
|
Matunis, E. L.,
M. J. Matunis, and G. Dreyfuss.
1993.
Association of individual hnRNP proteins and snRNPs with nascent transcripts.
J. Cell Biol.
121:219-228[Abstract/Free Full Text].
|
| 45.
|
Matunis, M. J.,
E. L. Matunis, and G. Dreyfuss.
1992.
Isolation of hnRNP complexes from Drosophila melanogaster.
J. Cell Biol.
116:245-255[Abstract/Free Full Text].
|
| 46.
|
Matunis, M. J.,
W. M. Michael, and G. Dreyfuss.
1992.
Characterization and primary structure of the poly(C)-binding heterogeneous nuclear ribonucleoprotein complex K protein.
Mol. Cell. Biol.
12:164-171[Abstract/Free Full Text].
|
| 47.
|
Mayeda, A.,
S. H. Munroe,
J. F. Caceres, and A. R. Krainer.
1994.
Function of conserved domains of hnRNP A1 and other hnRNP A/B proteins.
EMBO J.
13:5483-5495[Medline].
|
| 48.
|
Miau, L. H.,
C. J. Chang,
B. J. Shen,
W. H. Tsai, and S. C. Lee.
1998.
Identification of heterogeneous nuclear ribonucleoprotein K (hnRNP K) as a repressor of C/EBPbeta-mediated gene activation.
J. Biol. Chem.
273:10784-10791[Abstract/Free Full Text].
|
| 49.
|
Michael, W. M.,
M. Choi, and G. Dreyfuss.
1995.
A nuclear export signal in hnRNP A1: a signal-mediated, temperature-dependent nuclear protein export pathway.
Cell
83:415-422[Medline].
|
| 50.
|
Michael, W. M.,
P. S. Eder, and G Dreyfuss.
1997.
The K nuclear shuttling domain: a novel signal for nuclear import and nuclear export in the hnRNP K protein.
EMBO J.
16:3587-3598[Medline].
|
| 51.
|
Michelotti, E. F.,
G. A. Michelotti,
A. I. Aronsohn, and D. Levens.
1996.
Heterogeneous nuclear ribonucleoprotein K is a transcription factor.
Mol. Cell. Biol.
16:2350-2360[Abstract].
|
| 52.
|
Michelotti, E. F.,
T. Tomonaga,
H. Krutzsch, and D. Levens.
1995.
Cellular nucleic acid binding protein regulates the CT element of the human c-myc protooncogene.
J. Biol. Chem.
270:9494-9499[Abstract/Free Full Text].
|
| 53.
|
Moses, K.,
M. C. Ellis, and G. M. Rubin.
1989.
The glass gene encodes a zinc-finger protein required by Drosophila photoreceptor cells.
Nature
340:531-536[Medline].
|
| 54.
|
Musco, G.,
G. Stier,
C. Joseph,
M. A. Castiglione Morelli,
M. Nilges,
T. J. Gibson, and A. Pastore.
1996.
Three-dimensional structure and stability of the KH domain: molecular insights into the fragile X syndrome.
Cell
85:237-245[Medline].
|
| 55.
|
Nandabalan, K.,
L. Price, and G. S. Roeder.
1993.
Mutations in U1 snRNA bypass the requirement for a cell type-specific RNA splicing factor.
Cell
73:407-415[Medline].
|
| 56.
|
Ostrowski, J.,
I. Van Seuningen,
R. Seger,
C. T. Rauch,
P. R. Sleath,
B. A. McMullen, and K. Bomsztyk.
1994.
Purification, cloning, and expression of a murine phosphoprotein that binds the kappa B motif in vitro identifies it as the homolog of the human heterogeneous nuclear ribonucleoprotein K protein. Description of a novel DNA-dependent phosphorylation process.
J. Biol. Chem.
269:17626-17634[Abstract/Free Full Text].
|
| 57.
|
Peifer, M., and E. Wieschaus.
1990.
The segment polarity gene armadillo encodes a functionally modular protein that is the Drosophila homolog of human plakoglobin.
Cell
63:1167-1176[Medline].
|
| 58.
|
Pinol-Roma, S.,
Y. D. Choi,
M. J. Matunis, and G. Dreyfuss.
1988.
Immunopurification of heterogeneous nuclear ribonucleoprotein particles reveals an assortment of RNA-binding proteins.
Genes Dev.
2:215-227[Abstract/Free Full Text].
|
| 59.
|
Pinol-Roma, S., and G. Dreyfuss.
1991.
Transcription-dependent and transcription-independent nuclear transport of hnRNP proteins.
Science
253:312-314[Abstract/Free Full Text].
|
| 60.
|
Pinol-Roma, S., and G. Dreyfuss.
1992.
Shuttling of pre-mRNA binding proteins between nucleus and cytoplasm.
Nature
355:730-732[Medline].
|
| 61.
|
Pirrotta, V.
1988.
Vectors for P-mediated transformation in Drosophila.
Bio/Technology
10:437-456[Medline].
|
| 62.
|
Pollard, V. W.,
W. M. Michael,
S. Nakielny,
M. C. Siomi,
F. Wang, and G. Dreyfuss.
1996.
A novel receptor-mediated nuclear protein import pathway.
Cell
86:985-994[Medline].
|
| 63.
|
Regnier, P.,
M. Grunberg-Manago, and C. Portier.
1987.
Nucleotide sequence of the pnp gene of Escherichia coli encoding polynucleotide phosphorylase. Homology of the primary structure of the protein with the RNA-binding domain of ribosomal protein S1.
J. Biol. Chem.
262:63-68[Abstract/Free Full Text].
|
| 64.
|
Robertson, H. M.,
C. R. Preston,
R. W. Phillis,
D. M. Johnson-Schlitz,
W. K. Benz, and W. R. Engels.
1988.
A stable genomic source of P element transposase in Drosophila melanogaster.
Genetics
118:461-470[Abstract/Free Full Text].
|
| 65.
|
Roth, S., and T. Schupbach.
1994.
The relationship between ovarian and embryonic dorsoventral patterning in Drosophila.
Development
120:2245-2257[Abstract].
|
| 66.
|
Rubin, G. M., and A. C. Spradling.
1982.
Genetic transformation of Drosophila with transposable element vectors.
Science
218:348-353[Abstract/Free Full Text].
|
| 67.
|
Sauer, K.,
J. A. Knoblich,
H. Richardson, and C. F. Lehner.
1995.
Distinct modes of cyclin E/cdc2c kinase regulation and S-phase control in mitotic and endoreduplication cycles of Drosophila embryogenesis.
Genes Dev.
9:1327-1339[Abstract/Free Full Text].
|
| 68.
|
Segalat, L., and J. A. Lepesant.
1992.
Spatial distribution of the Sm antigen in Drosophila early embryos.
Biol. Cell
75:181-185[Medline].
|
| 69.
|
Shen, J.,
K. Zu,
C. L. Cass,
A. L. Beyer, and J. Hirsh.
1995.
Exon skipping by overexpression of a Drosophila heterogeneous nuclear ribonucleoprotein in vivo.
Proc. Natl. Acad. Sci. USA
92:1822-1825[Abstract/Free Full Text].
|
| 70.
|
Siebel, C. W.,
R. Kanaar, and D. C. Rio.
1994.
Regulation of tissue-specific P-element pre-mRNA splicing requires the RNA-binding protein PSI.
Genes Dev.
8:1713-1725[Abstract/Free Full Text].
|
| 71.
|
Singh, R.,
J. Valcarcel, and M. R. Green.
1995.
Distinct binding specificities and functions of higher eukaryotic polypyrimidine tract-binding proteins.
Science
268:1173-1176[Abstract/Free Full Text].
|
| 72.
|
Siomi, H.,
M. J. Matunis,
W. M. Michael, and G. Dreyfuss.
1993.
The pre-mRNA binding K protein contains a novel evolutionarily conserved motif.
Nucleic Acids Res.
21:1193-1198[Abstract/Free Full Text].
|
| 73.
|
Siomi, H.,
M. C. Siomi,
R. L. Nussbaum, and G. Dreyfuss.
1993.
The protein product of the fragile X gene, FMR1, has characteristics of an RNA-binding protein.
Cell
74:291-298[Medline].
|
| 74.
|
Siomi, H.,
M. Choi,
M. C. Siomi,
R. L. Nussbaum, and G. Dreyfuss.
1994.
Essential role for KH domains in RNA binding: impaired RNA binding by a mutation in the KH domain of FMR1 that causes fragile X syndrome.
Cell
77:33-39[Medline].
|
| 75.
|
Siomi, M. C.,
M. Fromont,
J. C. Rain,
L. Wan,
F. Wang,
P. Legrain, and G. Dreyfuss.
1998.
Functional conservation of the transportin nuclear import pathway in divergent organisms.
Mol. Cell. Biol.
18:4141-4148[Abstract/Free Full Text].
|
| 76.
|
Spreij, T. E.
1971.
Cell death during the development of imaginal discs of Calliphora erythrocephala.
Neth. J. Zool.
21:221-264.
|
| 77.
|
Swanson, M. S., and G. Dreyfuss.
1988.
Classification and purification of proteins of heterogeneous nuclear ribonucleoprotein particles by RNA-binding specificities.
Mol. Cell. Biol.
8:2237-2241[Abstract/Free Full Text].
|
| 78.
|
Takimoto, M.,
T. Tomonaga,
M. Matunis,
M. Avigan,
H. Krutzsch,
G. Dreyfuss, and D. Levens.
1993.
Specific binding of heterogeneous ribonucleoprotein particle protein K to the human c-myc promoter, in vitro.
J. Biol. Chem.
268:18249-18258[Abstract/Free Full Text].
|
| 79.
|
Taylor, S. J., and D. Shalloway.
1994.
An RNA-binding protein associated with Src through its SH2 and SH3 domains in mitosis.
Nature
368:867-871[Medline].
|
| 80.
|
Thummel, C. S.,
A. M. Boulet, and H. D. Lipshitz.
1988.
Vectors for Drosophila P-element-mediated transformation and tissue culture transfection.
Gene
74:445-456[Medline].
|
| 81.
|
Tomonaga, T., and D. Levens.
1995.
Heterogeneous nuclear ribonucleoprotein K is a DNA-binding transactivator.
J. Biol. Chem.
270:4875-4881[Abstract/Free Full Text].
|
| 82.
|
Usui, K., and K. I. Kimura.
1992.
Sensory mother cells are selected from among mitotically quiescent cluster of cells in the wing disc of Drosophila.
Development
116:601-610[Abstract].
|
| 83.
|
Van Seuningen, I.,
J. Ostrowski,
X. R. Bustelo,
P. R. Sleath, and K. Bomsztyk.
1995.
The K protein domain that recruits the interleukin 1-responsive K protein kinase lies adjacent to a cluster of c-Src and Vav SH3-binding sites. Implications that K protein acts as a docking platform.
J. Biol. Chem.
270:26976-26985[Abstract/Free Full Text].
|
| 84.
|
Weng, Z.,
S. M. Thomas,
R. J. Rickles,
J. A. Taylor,
A. W. Brauer,
C. Seidel-Dugan,
W. M. Michael,
G. Dreyfuss, and J. S. Brugge.
1994.
Identification of Src, Fyn, and Lyn SH3-binding proteins: implications for a function of SH3 domains.
Mol. Cell. Biol.
14:4509-4521[Abstract/Free Full Text].
|
| 85.
|
White, K.,
M. E. Grether,
J. M. Abrams,
L. Young,
K. Farrell, and H. Steller.
1994.
Genetic control of programmed cell death in Drosophila.
Science
264:677-683[Abstract/Free Full Text].
|
| 86.
|
Yang, X.,
M. R. Bani,
S. J. Lu,
S. Rowan,
Y. Ben-David, and B. Chabot.
1994.
The A1 and A1B proteins of heterogeneous nuclear ribonucleoparticles modulate 5' splice site selection in vivo.
Proc. Natl. Acad. Sci. USA
91:6924-6928[Abstract/Free Full Text].
|
| 87.
|
Zahler, A. M.,
K. M. Neugebauer,
W. S. Lane, and M. B. Roth.
1993.
Distinct functions of SR proteins in alternative pre-mRNA splicing.
Science
260:219-222[Abstract/Free Full Text].
|
| 88.
|
Zu, K.,
M. L. Sikes,
S. R. Haynes, and A. L. Beyer.
1996.
Altered levels of the Drosophila HRB87F/hrp36 hnRNP protein have limited effects on alternative splicing in vivo.
Mol. Biol. Cell.
7:1059-1073[Abstract].
|
Molecular and Cellular Biology, November 1999, p. 7846-7856, Vol. 19, No. 11
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