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Molecular and Cellular Biology, August 2000, p. 5749-5757, Vol. 20, No. 15
0270-7306/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
Species-Specific Elements in the Large T-Antigen J
Domain Are Required for Cellular Transformation and DNA Replication by
Simian Virus 40
Christopher S.
Sullivan,
James D.
Tremblay,
Sheara W.
Fewell,
John A.
Lewis,
Jeffrey L.
Brodsky, and
James M.
Pipas*
Department of Biological Sciences, University
of Pittsburgh, Pittsburgh, Pennsylvania 15260
Received 1 February 2000/Returned for modification 2 March
2000/Accepted 27 April 2000
 |
ABSTRACT |
The J domain of simian virus 40 (SV40) large T antigen is required
for efficient DNA replication and transformation. Despite previous
reports demonstrating the promiscuity of J domains in heterologous
systems, results presented here show the requirement for specific
J-domain sequences in SV40 large-T-antigen-mediated activities. In
particular, chimeric-T-antigen constructs in which the SV40 T-antigen J
domain was replaced with that from the yeast Ydj1p or Escherichia
coli DnaJ proteins failed to replicate in BSC40 cells and did not
transform REF52 cells. However, T antigen containing the JC virus J
domain was functional in these assays, although it was less efficient
than the wild type. The inability of some large-T-antigen chimeras to
promote DNA replication and elicit cellular transformation was not due
to a failure to interact with hsc70, since a nonfunctional chimera,
containing the DnaJ J domain, bound hsc70. However, this nonfunctional
chimeric T antigen was reduced in its ability to stimulate hsc70 ATPase
activity and unable to liberate E2F from p130, indicating that
transcriptional activation of factors required for cell growth and DNA
replication may be compromised. Our data suggest that the T-antigen J
domain harbors species-specific elements required for viral activities in vivo.
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INTRODUCTION |
The large and small tumor antigens
of simian virus 40 (SV40) are multifunctional regulatory proteins that
play vital roles at many steps in the virus life cycle. In particular,
the large tumor antigen (T antigen) is necessary for diverse functions, including viral DNA replication and transcriptional regulation; T
antigen is also necessary and often sufficient for tumorigenesis. The
ability of T antigen to elicit neoplastic transformation depends upon
its capacity to alter a number of multiprotein complexes, including
those containing members of the retinoblastoma (Rb) tumor suppressor
family (p107, p130, and pRb) and those containing p53 (12, 13,
14, 24, 26; reviewed in reference 5).
Essential T-antigen functions have been shown to depend completely or
in part on activities mapping within the first 80 amino acids of T
antigen (29). This amino-terminal segment of T antigen is
homologous to and functions both in vivo and in vitro as a J domain
(6, 21, 36). J domain-containing proteins constitute a
family of molecular chaperones known as DnaJ homologues or hsp40s (40-kDa heat shock proteins). Hsp40s associate with a partner chaperone, known as a DnaK homologue or hsc70 (70-kDa heat shock cognate proteins), and stimulate their ATPase activity, consequently modulating the ability of the hsc70 to bind and release polypeptides or
protein complexes. As a result, hsc70-hsp40 chaperone pairs may remodel
the conformations and regulate the activities of cellular protein
machines (reviewed in reference 19). Because T
antigen also acts on several protein complexes (see above), we proposed that the chaperone activity of T antigen is required to modulate the
activities of these multiprotein assemblies (5).
Experiments demonstrating that the amino terminus of T antigen is a
functional J domain also indicated that the SV40 T-antigen J domain is
functionally promiscuous. First, the J domain from SV40 T antigen
substitutes functionally for the J domain of the Escherichia
coli DnaJ protein, as assessed by the ability of the chimeric
protein to support both phage lambda plaque formation and bacterial
growth at a restrictive temperature (21). Second, the J
domains from two human hsp40s could replace the J domain in T antigen
and support SV40 replication (6). Third, a 136-amino-acid N-terminal fragment of T antigen that includes the J domain stimulates the ATPase activities of both mammalian and yeast hsc70s
(36). Fourth, the T-antigen J domain, when inserted into the
J domain of the cytoplasmic yeast protein, Ydj1p, rescues a
temperature-sensitive growth defect when expressed in yeast containing
mutations in YDJ1 (S. W. Fewell and J. L. Brodsky,
unpublished data). In accordance with these data, promiscuous
hsc70-hsp40 interactions have been observed both in vivo and in vitro
in a number of experimental systems (22, 25, 32, 33). In
contrast, a significant body of data indicate that only specific
interactions between an hsc70 and a unique hsp40 can promote
chaperone-dependent functions both in vitro and in vivo (for examples,
see references 2, 4, 10, 11, 27, 28, and
41). The determinants of this specificity remain
unknown and, because of the results presented above, it is unclear if T
antigens similarly possess such determinants.
To address this question, we substituted the J domain of SV40 T antigen
with the yeast Ydj1p and E. coli DnaJ J domains and examined
viral growth and infection, DNA replication, and the ability of the
hybrid T antigens to transform mammalian cells. In addition, because
the J domain from T antigens in the JC virus and SV40 are highly
homologous (31), the T-antigen J domain from JC virus was
used to replace the J domain of the SV40 T antigen. Although the J
domain from JC virus complemented each activity to some extent, we
found that the bacterial and yeast J domains could not substitute for
the T-antigen J domain. In accordance with these results, only the SV40
T antigen chimera containing the JCV J domain was able to dissolve an
Rb family-EF2 transcription factor complex. However, both the SV40 T
antigen and a defective T antigen containing the DnaJ J domain bound
hsc70, but only wild-type SV40 T antigen stimulated proficiently the
ATPase activity of hsc70. These data suggest that the T-antigen J
domain harbors amino acid sequence elements required for it to engineer
virus-specific activities in vivo and that hsc70 binding is not
sufficient for T-antigen J domain activities.
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MATERIALS AND METHODS |
Chimera construction.
The starting point for these
constructions was pSV-B3 (30), a plasmid which contains the
SV40 genome ligated into pBR322 at the BamHI sites. A new
plasmid (pSV40*) was made by replacing the HindIII
restriction site 7 bp upstream of the T-antigen translation start site
with a BglII site. This was accomplished by two-step PCR
with two flanking primers: SV-JD Taq (CTA AAG CAT TCG AAG CAG TAG
CAA TC) and SV-Ori (CAT TCT CCG CCC CAT GGC TGA C) and an internal primer SV-JD Bgl II (GGC TTT TGC AA AGA TCT TGC AAA GAT GGA TAA AG) (1). The resulting fragment was cut
with BglI and BstXI and ligated into the
corresponding sites of pSV-B3. No differences in viral growth were
observed between pSV40* and wild-type SV40 (J. D. Tremblay,
J. A. Lewis, and J. M. Pipas, unpublished observations). The
J domain for each chimera was PCR amplified and cloned into the
BglII and ApaI sites in the polylinker of pSKB, a
Bluescript (Stratagene)-derived vector in which the PstI
site was replaced with a BglII site. The first 210 nucleotides (nt) of yeast YDJ1 were amplified from plasmid
pET9d.Ydj1p (8) using YDJ-Bgl II (GCG AGA TCT TGC AAA
GAT GGT TAA AGA AAC TAA) and YDJ-Apa I (GCC GGG CCC AAA TTG
GTC ATA TAT ATC TCT C). The first 225 nt of the JC virus
T-antigen gene (16) were amplified using primers JCV-Bgl II
(GCG AGA TCT TGC AAA GAT GGA CAA AGT GCT GAA TAG) and
JCV-Apa I (TCC GGG CCC AAA ATC AGG CTG ATG AGC). The first
210 nt of E. coli DNA J (21) were amplified using DNAJ-Bgl II (GCG AGA TCT TGC AAA GAT GGC TAA GCA AGA TTA TTA) and DNAJ-Apa I (TCC GGG CCC ATA CTG ATC GTA TGC CGC).
DNA from SV40 T antigen was PCR amplified to introduce an
NaeI site at the J-domain border using primers SV-JD Nae I
(CAA CCT GAC TTT GCC GGC TTC TGG GAT G) and a
ClaI site using SV-JD Taq (see above) and then cloned into
pSKB at the NaeI and ClaI sites to create pSKB Nae.
To complete the construction of the chimeras (SV-JCV, SV-YDJ, and
SV-DNAJ), each J-domain plasmid was cut with BglII and
NlaIV, the SV40 fragment in pSKB Nae was removed with
BstXI and NaeI, and the two fragments were
ligated into pSV40* that was digested with BglII and
BstXI. NlaIV and NaeI are both
blunt-end cutters whose cleaved sites when ligated in these clones
maintain the open reading frame but result in the loss of both
restriction sites. All constructs were verified by nucleotide sequence
analysis. For plaque and replication assays, the viral genomes were
excised from pBR322 using BamHI and recircularized with T4
DNA ligase as described elsewhere (30).
The intron in pSV40* and pSV-DNAJ was removed by inverse PCR using
oligonucleotides SWF5 (ATC TCG AGC TCA GTT GCA TCC CAG)
and
SWF6 (ATC TCG AGA TTC CAA CCT ATG GAA CTG) and the Expand
Long Template PCR System (Roche Molecular Biochemicals). Amplified
DNAs
were digested with
XhoI and religated to generate pSV40*-Xho
and pSV-DNAJ-Xho. Baculovirus expression plasmids were constructed
by
subcloning
BglII-
BamHI fragments from pSV40*-Xho
and pSV-DNAJ-Xho
into the
BamHI site in pFastBac1
(Gibco-BRL). Proteins were expressed
in and purified from Sf9 insect
cells as described previously
(
7).
Plaque assays.
Freshly confluent 6-cm plates of BSC40 cells
were transfected using 0.5 mg of DEAE-dextran (Sigma) per ml in minimum
essential medium (MEM; Gibco) with 15 ng of DNA in a total volume of
200 µl. This mixture was carefully added to the center of each plate after removal of the old medium. After 15 min, plates were overlaid with 4 ml of a mixture containing one part melted 1.8% Bacto-Agar (Difco) cooled to 45°C and one part 2× modified Eagle medium without phenol red (Gibco) but supplemented with 10% fetal bovine serum (FBS;
HyClone) at 37°C. An additional 3 ml of this mixture was added every
3 days (35). On the sixth day, Neutral Red (Sigma) was added
at a final concentration of 0.05 mg/ml to the mixture in order to
visualize plaques. Plaques were scored by number, size, and time of appearance.
In vivo replication assay.
Freshly confluent
75-cm2 flasks of BSC40 cells were transfected with 45 ng of
DNA containing or lacking 45 ng of dl1007 DNA (control
dishes) using DEAE-dextran in a total volume of 800 µl. After 15 min,
dishes were fed with 10 ml of MEM-2% FBS and incubated at 37°C for
2 to 3 days. Cells were trypsinized from the plates, and DNA was
extracted with the Qiagen Plasmid Mini Kit. Extracted DNA was
linearized with BclI and quantified. The DNA was also treated with DpnI to digest methylated input template DNA,
while leaving newly replicated DNA intact (30). DNA extracts
were then separated by agarose gel electrophoresis, transferred to a
nylon membrane, and hybridized with a 32P-labeled probe
synthesized using random hexamer primers with SV40 genomic DNA
(30) as a template.
Transformation assay.
Transformation activity was measured
using a dense focus formation assay in REF52 cells (36).
Subconfluent plates of REF52 cells were transfected with 2 µg of DNA
using Lipofectamine as described by the manufacturer (Gibco). After
24 h, plates were split 1:3 and fed twice weekly with MEM-10%
FBS. After 4 to 6 weeks, plates were stained with crystal violet
(Sigma), and foci were counted.
Expression of T-antigen hybrids.
In order to verify
expression of each chimera, cells were transfected as described above
but with the addition of 0.2 µg of pRSV.neo (36) per dish.
After being split 1:3, plates were either used in the transformation
assay as described above or selected for drug resistance using 300 µg
of G418 (BioWhittaker) per ml. Drug-resistant colonies were picked and
expanded into lines. Lysates were prepared by resuspending cell pellets
in 300 µl of lysis buffer (50 mM Tris-HCl [pH 8]-5 mM EDTA-150 mM
NaCl-0.5% Nonidet P-40 supplemented with the following protease
inhibitors to the respective final concentrations: leupeptin, 1 µg/ml; pepstatin, 0.7 µg/ml; E64, 1 µg/ml; phenylmethylsulfonyl
fluoride, 50 ng/ml; aprotinin, 1 µg/ml; trypsin inhibitor, 10 µg/ml; and tolylsulfonyl phenylalanyl chloromethyl ketone [TPCK],
10 µg/ml) with rocking for 30 min at 4°C. Clarified extracts were
prepared by centrifuging the extract at 13,000 rpm in a microcentrifuge
for 15 min at 4°C. Equal amounts of total protein (determined by
measuring the absorbance of a diluted aliquot of the sample at 280 nm
in a spectrophotometer) were resolved by sodium dodecyl
sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred
to a nitrocellulose membrane (Schleicher & Schuell). PAb901, an
antibody specific to the C terminus of large T antigen (kindly provided
by Judith Tevethia, Pennsylvania State University Medical School,
Hershey, Pa.), was used to detect each of the T-antigen chimeras, and
anti-mouse actin antibody (Boehringer Mannheim) was used to detect
actin levels as a loading control. Both antibodies were decorated using
horseradish peroxidase-conjugated sheep anti-mouse antiserum (Amersham)
and the SuperSignal West Chemiluminescence system from Pierce.
Gel shift assay.
Sf9 insect cells and their handling have
been described previously (7). Baculoviruses expressing
human E2F4 and a truncated version of human p130(
2-371) were kindly
provided by Peter Whyte (Institute for Molecular Biology and
Biotechnology, McMaster University, Hamilton, Ontario, Canada).
Baculoviruses expressing human DP1 and E2F1 were generously provided by
Helen Piwnica Worms (Washington University Medical School, St. Louis,
Mo.).
Lysates enriched for E2F4-Dp1 or p130-E2F4-Dp1 were generated either by
double infecting Sf9 cells with multiple viruses encoding
E2F4 and DP1
or triple infecting them with multiple viruses encoding
E2F4, DP1, and
p130. Cells were incubated at 27°C for 43 h. Parental
and
transfected REF52 cells or insect cells were harvested 10-fold
in
buffer B (50 mM HEPES, pH 7.9; 400 mM KCl; 0.5 µM EDTA; 10%
glycerol; 0.1% Nonidet P-40), 1 µg of pepstatin per ml, and the
recommended dilution of Complete EDTA-free Protease Inhibitor
Cocktail
as recommended by the supplier (Boehringer Mannheim).
Cells were lysed
for 25 min on ice and centrifuged at 16,000 ×
g
in a microcentrifuge for 30 min at 4°C. The pellets were discarded,
and protein in the supernatant was quantified with the Bio-Rad
protein
assay reagent using bovine serum albumin as a
standard.
For the gel shift reaction, 10 µg of REF52 or insect cell lysate was
incubated with 1 ng of DNA probe containing an E2F binding
site
(5'-ATTTAAGTTTCGCGCCCTTTCTCAA-3') end labeled with
32P (U.S. Biochemical T4 protocol). Reactions (20 µl,
total volume)
were incubated for 10 min on ice and then for 20 min at
room temperature
in 20 mM HEPES (pH 7.4), 50 mM KCl, 8.5% glycerol, 1 mM EDTA,
and 1 mM MgCl
2. Reactions were loaded onto a
0.25 × TBE-4.5% acrylamide
gel and run at 200 V for 3 h at
4°C. Where indicated, competitor
DNA
(5'-ATTTAAGTTTCG
ATCCCTTTCTCAA-3') was also
included at a 500-fold
molar excess (underlined nucleotides denote
mutated sequence).
The following antibodies were added to identify
components of
the shifted DNA binding complexes: anti-p130-C20,
p107-SD9, E2F1-C20,
E2F2-C20, E2F3-C18, E2F4-C20, E2F5-C20, and pRb IF8
(Santa Cruz
Biotechnologies); anti-pRb AB2 (Calbiochem); and anti-pRb
14001A
(Pharmingen).
Hsc70 binding and ATPase assays.
REF52 lysate (prepared as
described above) was incubated with anti-T-antigen antibody (PAb901)
for 2 h on ice. The complexes were captured via a 20-s spin in a
microcentrifuge at 16,000 × g and washed three times
with 1 ml of buffer I (20 mM HEPES, pH 7.8; 40 mM KCl; 6 mM
MgCl2; 0.1% Nonidet P-40). The pellets were resuspended in
100 µl of buffer I, in the presence of an ATP regeneration system (50 µM GDP mannose, 40 µM creatine phosphate, 0.2 mg of creatine
phosphokinase per ml), and 1 µg of purified bovine hsc70 (StressGen)
for 30 min at room temperature. The complexes were recaptured via a
20-s spin in a microcentrifuge at 16,000 × g and
washed two times with 1 ml of phosphate-buffered saline (Gibco) and two
times with 1 ml of buffer I. The final pellets were resuspended in 2×
SDS-PAGE sample buffer containing dithiothreitol and
-mercaptoethanol and resolved by electrophoresis on an 8%
polyacrylamide gel. Proteins were transferred to an Immobilon
polyvinylidene difluoride membrane (Millipore) and immunoblots were
performed using the PAb901 or anti-hsc70 antibodies (StressGen) as
described above.
Ssa1p-ATP complexes were formed essentially as described previously for
Ssc1p (
12a). Ssa1p (25 µg) was mixed with 100 µCi
of
[

-
32P]ATP (NEN) and 25 µM ATP in complex buffer (25 mM HEPES-KOH,
pH 7.5; 100 mM KCl; 11 mM magnesium acetate) and
incubated for
30 min on ice. Complexes were purified from free ATP on a
NICK
spin column (Amersham/Pharmacia Biotech) preequilibrated with
complex buffer. Fifteen fractions were collected (two drops per
fraction) and monitored with a Geiger counter. Peak complex fractions
were pooled, adjusted to 10% glycerol, and frozen in liquid nitrogen.
Single turnover assays were performed at 30°C by mixing 25 µl
of
thawed complex and 25 µl of complex buffer with or without
1.6 µg
of the indicated T antigen. At specified time points, a
6-µl aliquot
of the reaction was removed and added to 2 µl of
stop solution (36 mM
ATP; 2 M LiCl; 4 M formic acid) on ice. Triplicate
2-µl aliquots of
this mixture were spotted onto a thin-layer chromatography
plate and
developed as described previously (
36).
 |
RESULTS |
Yeast and E. coli J-domain chimeric SV40 viruses fail
to produce plaques.
To test the ability of various J domains to
functionally substitute for the SV40 T-antigen J domain in vivo,
chimeric SV40 DNAs containing the J domains of JC virus T antigen,
Saccharomyces cerevisiae Ydj1p, or E. coli DnaJ
were constructed (Fig. 1). We first
examined whether these recombinant viruses formed plaques after being
transfected into monkey BSC40 cells. The wild-type SV40 control
produced visible plaques after 7 days, as expected (Fig.
2). The JC virus construct (SV-JCV)
produced plaques 2 to 3 days later and with a much smaller size (Fig.
2). In contrast, the cells transfected with the yeast (SV-YDJ)- and
E. coli (SV-DNAJ)-derived constructs failed to produce
plaques, even after 21 days of incubation. To establish that the
inability of these constructs to produce plaques arose specifically
from a defective T antigen, each construct was cotransfected with
dl1007, an SV40 mutant defective for viral coat protein
production (23). We found that dl1007
complemented both defective hybrid T antigens (Tremblay et al.,
unpublished). Thus, the failure of SV-YDJ and SV-DNAJ to produce
plaques was due to inactive chimeric T antigens.

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FIG. 1.
(A) Sequence alignment of the relevant J domains. The
aligned sequences of SV40 large T-antigen (residues 1 to 80), JCV large
T-antigen (residues 1 to 75), Ydj1p (residues 1 to 70), and DnaJ
(residues 1 to 70) J domains are shown (5, 6, 36). Helices
in the E. coli DnaJ J domain are underlined. (B)
Construction of the chimeric T-antigen J-domain proteins. The J-domain
sequences of the JCV T antigen, Ydj1p, and DnaJ used to replace the J
domain of SV40 large T antigen are depicted as shaded boxes. The p53
and Rb family binding site (LXCXE) is also shown.
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FIG. 2.
The Ydj1p and DnaJ J domains cannot functionally replace
the J domain of SV40 large T antigen. The ability of wild-type SV40 and
three SV40 mutants containing chimeric T-antigen constructs to form
infectious virions was assessed by a plaque assay: SV-JCV, the JCV J
domain in T antigen; SV-YDJ, the Ydj1p J domain in T antigen; and
SV-DNAJ, the DnaJ J domain in T antigen. The number of plaques per
nanogram of input DNA is shown below each dish. Wild-type SV40 plaques
were detected 7 days after infection, while plaques on the SV-JCV plate
appeared 9 to 10 days after infection and were noticeably smaller than
those on the wild-type SV40 dish. Plaques were absent on plates
infected with the SV-YDJ or SV-DNAJ chimeric viruses. A portion of each
plaque assay dish is shown.
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SV40 T-antigen chimeras containing yeast or E. coli J
domains do not support viral DNA replication.
Because the J domain
has been shown to be required for efficient viral DNA replication
(6, 29), the ability of each construct to support in vivo
replication was examined by extracting DNA from BSC40 cells that had
been transfected with each of the chimeric virus constructs. Southern
blot analysis of DpnI-treated DNA extracts showed that
SV-YDJ and SV-DNAJ failed to exhibit replication activity in vivo. In
contrast, the SV-JCV hybrid replicated DNA but was only ~10% as
proficient as wild-type SV40 (Fig. 3), a
finding consistent with the compromised ability of this chimera to form plaques (Fig. 2). When wild-type large T antigen (dl1007)
was transfected with the defective chimeras in trans,
replication of the chimeric DNA was recovered (Fig. 3), providing
evidence that the defect is not related to the condition of the input
DNA and is specific to the J domain in the T-antigen constructs.

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FIG. 3.
DNA replication in defective SV40 containing the Ydj1p
and DnaJ J domains. DNA was extracted from BSC40 cells infected with
wild-type, control, or chimeric SV40 viral DNA (lanes 1 to 5) and
assayed by Southern blot analysis using a SV40 probe. In addition,
wild-type T-antigen DNA (dl1007) was transfected alone (lane
6) or in combination with DNA encoding SV40 coat proteins
(dl4000; lane 7) or the Ydj1p (lane 8) or DnaJ (lane 9)
chimeric SV40 genomes and analyzed similarly. The positions of
replicated SV40 and dl1007 DNA were indicated.
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SV40 T-antigen chimeras containing yeast or E. coli J
domains are transformation defective.
The transforming ability of
each chimeric virus was measured by its ability to form dense foci on a
monolayer of REF52 cells. Subconfluent plates of cells were transfected
with a vector containing the complete SV40 genome encoding either the
SV40, JC virus, Ydj1p, or DnaJ J domains. After transfection, plates
were split and maintained for 4 to 6 weeks before being stained with
crystal violet. Foci were scored as darkly stained piles of cells
emerging from the monolayer. As shown in Fig.
4A and Table
1, constructs expressing the yeast and
E. coli J-domain chimeric T antigens failed to produce foci, whereas the JC virus J-domain construct was able to produce foci,
but at a somewhat reduced efficiency.

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FIG. 4.
(A) The Ydj1p and DnaJ chimeric T antigens fail to
transform REF52 cells. Transformation of REF52 cells was measured by a
dense focus assay. Cells were fixed and stained 4 weeks after
transfection with SV40 large T antigen, SV-JCV chimeric T antigen,
SV-DNAJ T antigen, SV-YDJ T antigen, or vector DNA. Photographs of a
representative portion of tissue culture dishes are shown. (B)
Steady-state levels of chimeric T antigens are similar to that of
wild-type T antigen. REF52 cells were cotransfected with pRSV.
Neo and SV40, SV-JCV, SV-YDJ, or SV-DNAJ T-antigen DNAs. G418-resistant
colonies were expanded into clonal lines, and the steady-state levels
of each chimeric large T antigen in cell extracts were measured by
immunoblot analysis using PAb901 (see Materials and Methods). The level
of actin was also determined as a loading control.
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To verify that the chimeric T antigens were expressed efficiently in
REF52 cells, replicate plates were transfected as described
in the
Materials and Methods but with the addition of a pRSV.neo
plasmid.
After being split, cells were tested either for focus
formation or
selected for drug resistance using G418. Extracts
from drug-resistant
colonies were prepared and then screened by
immunoblot analysis using
an anti-T-antigen-specific antibody.
As presented in Fig.
4B, the level
of each chimeric T antigen
was reduced compared to the wild-type level.
However, the level
of SV-JCV (which was transformation and
replication competent)
was identical to the levels of the defective
hybrids. Therefore,
the inability of SV-YDJ and SV-DNAJ and
compromised ability of
SV-JCV to form foci was not solely due to lower
steady-state levels
of the
protein.
SV40 T-antigen chimeras containing yeast or E. coli J
domains are defective for abolishing a p130-E2F DNA binding
complex.
One function of the T-antigen J domain is to act in
cis with the Rb binding motif to disable the growth
inhibitory functions of the Rb family of proteins (18, 36, 37,
37a; 42). When bound by the Rb family of proteins, such as
pRb, p107, or p130, E2Fs are unable to transactivate genes that
induce DNA synthesis and cellular division; T antigen disrupts this
complex, thereby activating DNA synthesis and cell division (12,
14, 40). Thus, we wished to determine if the chimeric T antigens
were capable of disrupting Rb-E2F family complexes.
Lysates of stable REF52 cell lines expressing SV40 large T antigen were
incubated in a gel shift reaction using an oligonucleotide
containing
an E2F consensus-binding site. To demonstrate the relative
migration of
"free" E2F versus Rb family-E2F complexes, a gel
shift of lysate
from insect cells expressing only E2F4-DP1 or
p130-E2F4-DP1 was
performed (Fig.
5A, lanes 7 and 8). When
incubated
in the gel shift reaction, 2-day-postconfluent parental REF52
cell lysate yielded bands that migrated as free E2F as well as
Rb
family-E2F complexes (Fig.
5A, lane 1). As expected, the Rb
family-E2F complexes were absent from lysates of 2-day-postconfluent
wild-type T-antigen REF52 cell lines but free E2F-DNA binding
complexes
were present (Fig.
5A, lane 2). The E2F-DNA binding
complexes were
specific since coincubation of an excess of a 500-fold
molar ratio of
specific but not mutated nonradioactive oligonucleotide
abolished DNA
binding (Fig.
6A, lanes 3 to 6).

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FIG. 5.
Analysis of Rb family-E2F complexes in
T-antigen-transfected REF52 cells. Lysates from parental cells (P) and
cells transfected with SV40 T antigen (T) were subjected to gel shift
analysis using radiolabeled nucleotide probe containing a consensus E2F
binding site. (A) A 500-fold molar excess of specific (lanes 3 and 4)
or mutated (lanes 5 and 6) competitor DNA was included in the gel shift
reactions. Arrows indicate the migration of E2F4, and p130-E2F4-Dp1
complexes from doubly E2F4-Dp1 baculovirus-infected insect cells (lane
7) and triply p130-E2F4-Dp1 infected cells (lane 8). (B) Parental or
T-antigen-transfected REF52 cell lysates were incubated alone (lanes 1 and 2) or in the presence of antibody against p107 (lanes 3 and 4),
p130 (lanes 5 and 6), or pRb (lanes 7 and 8). Lane 8 appears
overexposed as a result of incubation with multiple anti-pRb
antibodies. Multiple antibodies are required to effect efficient
binding to pRb (data not shown). (C) Parental or T-antigen-transfected
REF52 cell lysates were incubated alone (lanes 1 and 2) or in the
presence of antibodies against E2F1 (lanes 3 and 4), E2F2 (lanes 5 and
6), E2F3 (lanes 7 and 8), E2F4 (lanes 9 and 10), or E2F5 (lanes 11 and
12).
|
|

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|
FIG. 6.
The Ydj1p and DnaJ chimeric T antigens cannot fully
abolish a p130-E2F DNA binding complex. Lysates from parental REF52
cells (P; lane 1) and two clones from REF52 cells transfected with SV40
large T antigen (SV40, lanes 2 and 3), SV-JCV (lanes 4 and 5), SV-YDJ
(lanes 6 and 7), and SV-DNAJ (lanes 8 and 9) were subjected to gel
shift analysis using an E2F consensus site-containing probe.
|
|
To identify the Rb family member(s) present, antibodies either to
p107, p130, or pRb were included in the gel shift reaction.
Anti-p130
antibody shifted a majority of the parental REF52 complex
that migrates
at the Rb family-E2F position (Fig.
5B, lane 5).
Incubation with
anti-p107 or anti-pRb had no effect on the E2F-DNA
complexes (Fig.
5B,
lanes 3 and 4 and lanes 7 and 8). We conclude
that the Rb family
complex present in postconfluent parental REF52
cells but absent in
postconfluent T-antigen-expressing cells includes
p130-E2F.
Similar supershift experiments were performed with antibodies against
the various E2F family members. Anti-E2F4 antibody supershifted
a
majority of the free E2F complexes present in the T-antigen-expressing
cells (Fig.
5C, lane 10). In contrast, antibodies directed against
E2Fs
1 to 3 and E2F5 had little effect in this assay. Thus, the
free E2F
induced by T antigen and the E2F bound to p130 is primarily
E2F4.
Finally, we tested whether the chimeric T antigens disrupted p130-E2F4
DNA binding complexes. Two cell lines derived from
independent clones
were grown to 2 days postconfluency and then
lysed. E2F gel shift
reactions conducted with these lysates demonstrated
that the SV-JCV
chimera completely abolished the p130-E2F4 DNA
binding complex (Fig.
6,
lanes 4 and 5), whereas the SV-YDJ and
SV-DNAJ chimeras did not (Fig.
6, lanes 6 to 9). Therefore, only
SV-JCV, like wild-type T antigen
disrupts a p130-E2F-DNA binding
complex in postconfluent
cells.
Wild-type and chimeric T antigens bind mammalian hsc70, but only
wild-type T antigen significantly enhances hsc70 ATPase
activity.
The J domain of SV40 T antigen has been shown to bind
hsc70, and mutations in T antigen that disrupt this association
abrogate SV40 DNA replication (6). Thus, it was possible
that the SV-YDJ and SV-DNAJ chimeras were simply unable to complex with
hsc70. To test this hypothesis, we developed an in vitro assay to
measure hsc70 binding to T antigen prepared from transformed cell
lysates. As a positive control, we prepared lysate from cells
transformed with wild-type SV40 T antigen and, as a negative control,
parental (untransformed) cell lysate was used. In addition, because it had been shown that mutations in the conserved HPD sequence in the J
domain of T antigen abolished T-antigen function and hsc70 binding
(reference 6; see also the introduction), lysates
from cells transformed with SV40 T antigen containing the D44N mutation (5110, [29]) were prepared. Finally, to
examine whether a defective chimera bound hsc70, we made lysate from
the SV-DNAJ-transformed cells. These lysates were incubated with
purified bovine brain hsc70. T antigen was then immunoprecipitated
using a C-terminal-specific antibody, and the pelleted complexes were
examined via immunoblot analysis. Approximately equal levels of all
T-antigen constructs were immunoprecipitated (Fig.
7A, lanes 2 to 4). Control reactions demonstrated that equal amounts of endogenous and exogenous hsc70 were
also present in each assay. As expected, wild-type T antigen, but not
the T-antigen J-domain point mutant (D44N), bound hsc70 (Fig. 7A, lanes
2 versus lane 4); lysate from parental cells also failed to display
hsc70 in the immunoprecipitate. However, T antigen from cells
transformed with the SV-DNAJ T antigen were hsc70-binding proficient
(lane 3).

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|
FIG. 7.
T-antigen binding to hsc70 and stimulation of hsc70
ATPase activity. (A) Lysates containing various T antigens were
incubated with hsc70 and immunoprecipitated for T antigen. T antigen
and hsc70 associated with the pellets from the parental (lane 1),
wild-type (lane 2), SV-DNAJ hybrid (lane 3), and the SV40 J-domain
mutant D44N (5110, lane 4) cell lysates are shown. Input and endogenous
hsc70 levels were also measured. (B) ATPase assays were performed as
described in Materials and Methods. Stimulation of Ssa1p ATPase
activity by wild-type T antigen ( ), SV-DnaJ ( ), D44N ( ), and
Ssa1p alone ( ) are shown.
|
|
The result presented above indicating that a nonfunctional T-antigen
hybrid (SV-DNAJ) bound to hsc70 was surprising, given
that other T
antigens containing a mutated J domain fail to interact
with hsc70
(D44N, Fig.
7A) (
6). However, it is possible that
the
interaction between the cochaperones may be unproductive,
i.e., the J
domain of SV-DNAJ may be unable to enhance the ATPase
activity of
hsc70, an activity that is required to promote viral
replication and
cellular transformation (
36). To test this hypothesis,
we
purified wild-type T antigen, the D44N T antigen mutant, and
SV-DNAJ
from baculovirus-infected cells as previously described
(
7).
To discount the endogenous ATPase activity of T antigen,
we preformed
ATP-hsc70 complexes (see Materials and Methods) and
then added T
antigen. Such single-turnover ATPase assays measure
the ability of a
J-domain-containing protein to stimulate specifically
the hydrolysis of
hsc70-bound ATP (
12a). When we performed this
assay multiple
times, we observed that wild-type T antigen stimulated
endogenous hsc70
ATP hydrolysis by 4.6- to 5.5-fold, while D44N
and SV-DNAJ stimulated
hydrolysis by only 2.3- and 2.2- to 2.9-fold,
respectively (Fig.
7B
displays a representative experiment). As
a control, we found that
purified T antigen completely lacking
the J domain (
12b)
stimulated hsc70 ATP turnover by 0.4-fold
(data not shown). These
results indicate that the defective T-antigen
J-domain mutant and
SV-DNAJ hybrid proteins are compromised for
their ability to interact
productively with
hsc70.
 |
DISCUSSION |
Our results show that the S. cerevisiae Ydj1p and
E. coli DnaJ J domains fail to substitute functionally for
the SV40 T-antigen J domain for one or more activities necessary for a
complete virus life cycle (Fig. 2), including the ability to support
viral DNA replication (Fig. 3). In addition the J domains from Ydj1p
and DnaJ cannot substitute functionally for the SV40 T-antigen J domain in activities required for dense foci formation in REF52 cells (Fig.
4). In contrast, the JC virus J domain can replace the SV40 T antigen J
domain for all of the activities necessary for a complete SV40 life
cycle in cell culture, for viral DNA replication in an established in
vivo system, and for the ability to transform REF52 cells in a dense
focus assay. In each of these assays, however, the JC virus J domain is
less efficient than the wild-type SV40 T-antigen J domain. This result
is not unexpected, since the decreased efficiency of JC virus compared
with SV40 has been seen in the results from other SV40-JC virus
chimeras studied (9). Nevertheless, these results provide
further evidence that not all J domains are interchangeable. Most
striking, reciprocal domain-swapping experiments yielded opposing
results: the yeast Ydj1p protein containing the T-antigen J domain
(Fewell and Brodsky, unpublished) and the bacterial
DnaJ protein harboring the T-antigen J domain (21) are
active in yeast and bacteria, respectively, but the DnaJ and Ydj1p J
domains fail to function in the context of SV40.
One role of the J domain is to interact with a cognate hsc70 molecular
chaperone. The J domain forms a four-bundle
-helix, in which helices
I and IV occupy the base of the structure and helices II and III form a
finger-like projection, with the conserved amino acid sequence HPD
located at the tip of the projection. Nuclear magnetic resonance
studies have indicated that hsc70 interacts primarily with amino acid
residues in helix II and the HPD sequence (17). Consistent
with these data, mutations in the HPD motif in bacterial
(39) and yeast J domains (15, 38) are known to
abolish the activities of DnaJ homologue-hsc70 complexes. Because the
T-antigen J domain can substitute functionally for the Ydj1p (Fewell
and Brodsky, unpublished) and DnaJ (21) J domains, we suggest that the T-antigen J domain is proficient for binding to the
bacterial and yeast hsc70 partner proteins. Thus, one explanation for
the inability of the DnaJ and Ydj1p J domains to replace the T-antigen
J domain is that mammalian hsc70 cannot bind to the other J domains. We
found, however, that the bacterium-derived chimera could bind to hsc70
(Fig. 7). Because SV-DNAJ, which is defective for viral DNA
replication, focus formation, and disrupting p130-E2F complexes,
associates with hsc70 as well as wild-type T antigen, the simplest
conclusion from these data is that hsc70 association alone is not
sufficient to support J-domain function in DNA replication and cellular
transformation. In accordance with this hypothesis, we found that both
the D44N and SV-DnaJ proteins displayed a reduced ability to enhance
hsc70 ATPase activity.
Although the ability of D44N and SV-DNAJ to enhance the ATPase activity
of hsc70 was compromised with respect to wild-type T antigen, we note
that the level of stimulation (~2- to 3-fold) was higher than that
obtained when a T-antigen construct lacking the J domain was incubated
with hsc70 (0.4-fold). Thus, these defective proteins can interact
productively to some extent with hsc70. For D44N, we suggest that the
productive interaction is transient, since stable complexes with hsc70
were not observed (Fig. 7A). In contrast, SV-DNAJ formed a stable
complex with hsc70 but could not fully stimulate the ATPase activity of hsc70.
E2F dissociated from Rb family members (pRb, p107, or p130) induces
transactivation of the genes required for DNA replication and cellular
division, whereas binding of E2F by Rb family members inhibits the
transactivation activity of E2F (40). The J domain of T
antigen is required in cis with the Rb binding motif to
induce cellular division (36), and is also required to free
p130 from E2F4 and to decrease the half life of p130 (37a,
42). Here we show that a p130-E2F DNA binding complex is
present in postconfluent REF52 cells and that the action of T antigen
or the SV-JCV chimera disrupts this complex, thereby liberating E2F4
(Fig. 5). In contrast, neither SV-YDJ nor SV-DNAJ disrupts the p130-E2F
DNA binding complex. This result provides a mechanism to explain the
inability of the T-antigen chimeras that contain other J domains to
induce focus formation and to successfully complete viral DNA replication.
In conclusion, our work suggests that there is a specificity element
within some J domains that is not present in yeast or E. coli J domains but that is required for viral DNA replication and
transformation. This element is not restricted to viral J domains,
since two mammalian J domains are functional in the SV40 T antigen
(6). Furthermore, this specificity element is not simply an
inability of a defective J domain to bind to hsc70. One possibility is
that there is another T-antigen function in amino acids 1 to 75 other
than the J-domain chaperone activity. For example, the T-antigen J
domain may contain binding sites for cellular targets other than hsc70.
In support of this idea, it has been shown that the binding site for
the Tst-1/Oct-6/SCIP transcription factor maps to the T-antigen J
domain (34). Alternatively, it is possible that although the
T-antigen chimeras containing nonfunctional J domains can bind to
hsc70, they may fail to regulate its activity, as suggested by the
experiments presented in Fig. 7B. It is also possible that the
association between a cochaperone or modulator of chaperone action,
such as BAG-1 (3, 20), and the T-antigen J domain in the
chimera is absent. In these last scenarios, the net effect is that T
antigen fails to induce hsc70 to act on some cellular protein, such as
the transcriptional repressor p130; thus, the cells would not be
transformed. Future experiments will aim to identify the specificity
element(s) in the T-antigen J domain and decipher its role in inducing
DNA replication and transformation.
 |
ACKNOWLEDGMENTS |
This work was supported by grant CA40586 to J.M.P. from the
National Institutes of Health and by a grant from the American Cancer
Society (RPG-99-267-01-MBC) to J.L.B. S.W.F. was supported by a
National Research Service Award from the National Institutes of Health.
We thank Paul Cantalupo for the expert technical assistance and protein
purification and Thomas Harper for help with the figures.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Department of
Biological Sciences, University of Pittsburgh, Pittsburgh, PA 15260. Phone: (412) 624-4350. Fax: (412) 624-4759. E-mail:
pipas+{at}pitt.edu.
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