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Molecular and Cellular Biology, September 2000, p. 6537-6549, Vol. 20, No. 17
0270-7306/00/$04.00+0
A Bromodomain Protein, MCAP, Associates with
Mitotic Chromosomes and Affects G2-to-M
Transition
Anup
Dey,1
Jan
Ellenberg,2,
Andrea
Farina,1
Allen E.
Coleman,3
Tetsuo
Maruyama,1,
Selvaggia
Sciortino,1
Jennifer
Lippincott-Schwartz,2 and
Keiko
Ozato1,*
Laboratory of Molecular Growth
Regulation,1 and Cell Biology and
Metabolism Branch,2 National Institute of
Child Health and Human Development, and Laboratory of
Genetics, Division of Basic Sciences, National Cancer
Institute,3 National Institutes of Health,
Bethesda, Maryland 20892-2753
Received 22 November 1999/Returned for modification 2 February
2000/Accepted 2 June 2000
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ABSTRACT |
We describe a novel nuclear factor called mitotic
chromosome-associated protein (MCAP), which belongs to the poorly
understood BET subgroup of the bromodomain superfamily. Expression of
the 200-kDa MCAP was linked to cell division, as it was induced by growth stimulation and repressed by growth inhibition. The most notable
feature of MCAP was its association with chromosomes during mitosis,
observed at a time when the majority of nuclear regulatory factors were
released into the cytoplasm, coinciding with global cessation of
transcription. Indicative of its predominant interaction with
euchromatin, MCAP localized on mitotic chromosomes with exquisite specificity: (i) MCAP-chromosome association became evident subsequent to the initiation of histone H3 phosphorylation and early chromosomal condensation; and (ii) MCAP was absent from centromeres, the sites of
heterochromatin. Supporting a role for MCAP in G2/M
transition, microinjection of anti-MCAP antibody into HeLa cell nuclei
completely inhibited the entry into mitosis, without abrogating the
ongoing DNA replication. These results suggest that MCAP plays a role in a process governing chromosomal dynamics during mitosis.
 |
INTRODUCTION |
The bromodomain is a conserved
sequence motif present in a diverse array of proteins (14,
21). Although its function is not fully understood, a recent
nuclear magnetic resonance study indicates that a bromodomain forms a
bundle of four
helices (8), which may serve as a
chromatin-targeting module (57). Proteins containing
bromodomains have been classified into several distinct subgroups,
which include the SWI/SNF subgroup, the coactivator subgroup such as
CREB-binding protein (CBP) and p300, as well as the histone acetylase
subgroup (21). Mammalian RING3 (2, 6, 43, 49),
Drosophila FSH (9), and yeast BDF1 (3, 26) and BDF2 (Sacch database [YDL070W]) belong to another, less understood subgroup, BET. Proteins of the BET subgroup have two bromodomains that are more similar within the subgroup than other subgroups. In addition, they carry an ET domain, whose function is also
obscure (21, 50). RING3, mapped to the major
histocompatibility complex (2), is a component of
transcription factor mediators (23) and is reported to be a
nuclear kinase (6), although kinase activity is not
confirmed with the murine homologue, Fsrg1 (43). The yeast
homologue, BDF1, interacts with general transcription factors
(30) and regulates transcription (26). It also
localizes to meiotic and mitotic chromosomes and is implicated in
control of cell growth (3).
A series of dramatic events follow when cells transit from
G2 to M (11). During this period, chromosomal
architecture undergoes immense changes. Sister chromatids, joined
together by cohesion, condense in a spatially and temporally ordered
manner, and line up on the metaphase plate. They are then pulled apart
to opposite poles through spindle contraction. Recent studies have
identified a number of proteins involved in chromosomal cohesion and
condensation, many of which belong to the SMC family and are conserved
throughout eukaryotes (13, 18, 22, 35, 58). Histone H3
phosphorylation and topoisomerase II are also critical for chromosomal
condensation and segregation (16, 20, 55).
Accompanying these structural alterations, immense functional changes
occur during mitosis. Transcription by all three RNA polymerases shuts
down, with the exception of few genes still transcribed during mitosis
(12, 41). Coinciding with chromosomal condensation, many
general and specific transcription factors are dispersed into the
cytoplasm and/or inactivated by phosphorylation (29, 45).
Some promoters become devoid of transcription factor occupancy as well
as transcription elongation complexes (17, 29, 38).
Chromatin-remodeling factors of the SWI/SNF family are also released
into the cytoplasm and become inactive during mitosis (33,
46). Transcription resumes in the newly divided cells when
chromosomes decondense. Transcriptional repression during mitosis is
apparently more prominent in cells of higher eukaryotes than in yeast
cells, where transcription continues throughout the cell cycle
(35). Although the mechanism controlling mitotic
transcriptional repression has not been completely elucidated, it is
thought to be relevant to reprogramming of gene expression patterns in
newly formed daughter cells (32).
The present work describes a novel member of the BET subgroup of the
bromodomain superfamily, called MCAP, whose expression is induced by
growth stimulation and down-regulated by growth inhibition.
Interestingly, MCAP localizes to the condensed chromosomes during
mitosis when many other nuclear regulatory factors are dispersed into
the cytoplasm. Analysis of MCAP localization during mitosis reveals an
interesting spatial specificity supporting its predominant interaction
with the euchromatic regions of chromosomes. Antibody microinjection
experiments indicate that MCAP has a role in cell cycle progression to
mitosis. The possible significance of MCAP behavior during mitosis is
discussed in terms of regulation of various mitotic events such as
transcription factor dynamics.
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MATERIALS AND METHODS |
Cloning of murine MCAP cDNA.
A 150-bp bromodomain fragment
was isolated from a murine F9
ZAP cDNA library by PCR using
degenerate primers and was used as a probe to rescreen the same
library. A 2,520-bp fragment obtained was used for a third
screening of F9
ZAP and adult murine thymus UniZAP libraries
(Stratagene; a gift from P. Love). Inserts of several clones were
appropriately excised and recloned into pBluescript to construct a
full-length cDNA. Green fluorescent protein (GFP) fusion vectors were
constructed by inserting MCAP cDNA into pGFP-C1 or histone H2B cDNA
into pGFP-N1 (Clontech).
MCAP antibodies.
Rabbit polyclonal antibody was raised
against a recombinant MCAP peptide corresponding to amino acid
positions 156 to 285, expressed in pET15b (Novagen) (N-MCAP). Another
rabbit antibody was produced against a 14-amino-acid-long synthetic
peptide corresponding to the C terminus of MCAP (C-MCAP). Sera were
purified on protein G-Sepharose beads (Amersham). Antibody specificity
was confirmed by absorption of the reactivity by excess immunogens.
Fluorescence in situ hybridization (FISH) analysis.
A
procedure described in reference 42 was used.
Briefly, a 18-kb mouse genomic fragment containing a 5' flanking
sequence and first five exons of MCAP in the EMBL-4 vector was labeled with biotin-16-dUTP (Boehringer Mannheim) by nick translation. Samples
placed on slides were digested by RNase (20 mg/ml), treated with
pepsin, and fixed with 1% formaldehyde. Samples were further denatured
in 70% formamide-2× SSC (1× SSC is 0.15 M NaCl plus 0.015 M sodium
citrate), ethanol dehydrated, and allowed to hybridize for 3 days at
37°C. Detection was performed by tyramide signal amplification (NEN
Life Science). Images were captured using a Zeiss fluorescent
microscope equipped with a cooled charge-coupled device camera,
controlled by IP-Lab software (Scanalysis, Inc.). Images were acquired
with a 63× objective using specific filter cubes (Chroma).
Lymphocytes and cell lines.
Spleen cells (106
cells/ml) from 5- to 8-week-old C57BL/6 mice were cultured in RPMI 1640 containing 10% fetal bovine serum (FBS) supplemented with 5 × 10
5 M 2-mercaptoethanol and stimulated with concanavalin
A (ConA; 1 µg/ml) or bacterial lipopolysaccharide (LPS; 1 µg/ml)
(both from Sigma). To measure proliferation, cells were incubated with [3H]thymidine (1 µCi/ml; Amersham) for 2 h prior
to harvest (4). Myeloid progenitor 32D cells (47)
were maintained in the same medium as above supplemented with 10%
WEHI3 supernatants as a source of interleukin-3 (IL-3). To induce
growth arrest, cells were incubated in the absence of WEHI3
supernatants or 6 h. P19 embryonal carcinoma cells were maintained
in alpha minimal essential medium with 10% FBS and treated with 1 µM
all-trans retinoic acid (RA) (Sigma) (19). HeLa,
NIH 3T3, and NRK cells were maintained in Dulbecco's modified Eagle
medium with 10% FBS.
Semiquantitative RT-PCR and immunoblot analysis.
MCAP
transcripts were detected from total RNA by semiquantitative reverse
transcription-PCR (RT-PCR) (54), using primers 5'-TGAAGAGCCAGTTGTTAC-3' and 5'-CTTCATCTTGGAAGAACC-3',
which generated a 705-bp fragment in PCRs. A 1:5 dilution of
reverse transcription mixture was used for PCR. PCR (30 cycles for
MCAP; 28 cycles for hypoxanthine phosphoribosyltransferase [HPRT],
run as a control) was run at 94°C for 1 min, 54°C for 1 min, and
72°C for 1 min. For immunoblot analysis, nuclear extracts (2 to 10 µg of protein) prepared as described elsewhere (7) were
separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis
(SDS-PAGE) on a 6% gel and blotted onto ImmobilonP (Millipore).
Filters were incubated with a 1:10,000 dilution of anti-MCAP antibody.
Bound antibodies were detected by the Amersham ECL kit.
Immunofluorescent staining.
Approximately 105
HeLa cells or P19 cells grown on coverslips were fixed in 4%
paraformaldehyde for 20 min at room temperature. Cells were incubated
first in blocking buffer for 20 min and then with rabbit antibody to
MCAP (N-MCAP, diluted at 1:500 in blocking buffer), Sp1 or CBP (both
diluted at 1:50; Santa Cruz), phosphorylated histone (phospho-histone)
H3 (diluted at 1/100; Upstate Biotechnology), or mouse monoclonal
anti-
-tubulin antibody (1:250; Sigma) for 60 min. Cells were washed
and further incubated with biotinylated anti-rabbit immunoglobulin G
(IgG; 1:200) for 1 h and with Cy2-conjugated streptavidin (1:100)
(both from Amersham) or rhodamine-conjugated anti-mouse IgG (Cappel)
for 30 min. Cells were counterstained with Hoechst 33342 (1 µg/ml)
for 5 min. To prepare spread chromosomes, P19 cells were incubated with
a hypotonic buffer (10 mM HEPES [pH 7.0], 30 mM glycerol, 1 mM
CaCl2, 0.8 mM MgCl2) for 10 min at 4°C
(27) and cytospun on a slide prior to incubation with antibody. Details of immunostaining are described elsewhere
(29). Stained cells were viewed with a Zeiss Axiophot
microscope using a 63× planachromat or a 100× planneofluar oil
immersion objective.
Three-dimensional reconstruction of z sections and
photobleaching.
The procedure followed is described in reference
10. Briefly, HeLa or NRK cells (105)
grown on a coverslip were transfected with 0.1 to 1 µg of GFP-MCAP cDNA using the Lipofectamine-Plus reagent (Bethesda Research
Laboratory). Live GFP-MCAP-expressing cells were analyzed by optical
sectioning on a Zeiss LSM 410 confocal microscope using a Zeiss 100×
NA 1.4 planachromat oil immersion objective. A stack of 24 x-y sections was reconstructed for a three-dimensional image.
Twelve hours after transfection with GFP-MCAP or histone H2B-GFP, cDNA
was subjected to fluorescence recovery after photobleaching (FRAP)
experiments. Briefly, the prebleach intensity was recorded with
attenuated 488-nm Ar laser excitation (20% power, 1% transmission) of
a Zeiss LSM 410 confocal microscope. Subsequently, a 4-µm-wide strip
across the entire nucleus was photobleached with full laser intensity
(100% power, 100% transmission), and immediately afterward recovery
of fluorescence was recorded with attenuated light until the intensity
reached a stable plateau.
Biochemical solubility of MCAP.
HeLa cells were treated with
nocodazole (0.04 µg/ml; Sigma) for 6 h, and mitotic cells were
harvested by mechanical shaking, which yielded mitotic cells of >95%
purity. Asynchronous and mitotic cells were incubated in 5 volumes of
ice-cold hypotonic buffer (10 mM HEPES [pH 7.4], 10 mM NaCl, 3 mM
MgCl2, 1 mM dithiothreitol) containing a proteinase
inhibitor cocktail (Boehringer), AEBSF (1 mM), phosphatase inhibitors
Na3 VO4 (1 mM), Na2MoO4
(100 µM), and NaF (10 mM) and then lysed using a 25-gauge needle. The
lysates were divided into three parts, each incubated with the same
buffer containing 100, 200, or 300 mM NaCl for 20 min at 4°C. The
soluble and insoluble fractions were separated by centrifugation at
5,000 rpm for 5 min at 4°C. Pellets were incubated with the same
buffer containing 20 mM MgCl2 and 0.2 U of DNase I
(Boehringer) per ml for 30 min at 37°C. Samples were fractionated by
SDS-PAGE on a 4 to 20% gel and immunoblotted with antibodies for MCAP,
TFIIB, or histone H3.
Antibody microinjection.
HeLa cells plated on Cellocate
coverslips (Eppendorf) were synchronized by a double-thymidine block
(48). Briefly, cells were incubated in 2.5 mM thymidine for
14 h, then without thymidine for 8.5 h, and finally with
thymidine again for 14 h. Cells were washed and allowed to stand
in complete medium for indicated periods of time. Synchronization of
cells used for injections was monitored by fluorescence-activated cell
sorting (FACS) analysis, bromodeoxyuridine (BrdU) incorporation, and
mitotic indices. Purified anti-MCAP IgG (N-MCAP; 1 µg/µl) or
preimmune IgG (1 µg/µl) was injected directly into the nuclei using
a Femtotip (Eppendorf) in the presence of complete medium supplemented
with 25 mM HEPES (pH 7.5). Cells in early S or G2 phase
were injected with antibody 1 or 6 h after removal of thymidine.
In some experiments, cells were incubated with 10 µM BrdU (Amersham)
immediately after injection. Cells were then incubated in the complete
medium for indicated periods of time. Soon after cells reached M stage,
they were fixed and stained with biotinylated anti-rabbit antibody and
streptavidin-Cy3 and counterstained with Hoechst 33342. In BrdU-treated
samples, cells were treated with 2 M HCl followed by 0.25% Triton
X-100, and incorporated BrdU was detected with monoclonal anti-BrdU
antibody (PharMingen), reacted with biotinylated anti-mouse antibody
and streptavidin-conjugated Cy2.
 |
RESULTS |
MCAP is a conserved bromodomain protein.
A bromodomain is
found in a growing number of proteins involved in the regulation of
nuclear activities (15, 21). Recent information on lower
eukaryote genomes indicates the presence of additional
bromodomain-containing proteins in higher eukaryotes. To identify novel
mammalian proteins carrying a bromodomain, we screened mouse cDNA
libraries with a 150-bp PCR fragment containing a part of bromodomain
sequence. By assembling five overlapping cDNAs obtained by several
cycles of screening, we generated a full-length clone of 5,281 bp. The
predicted first methionine was identified at nucleotide position +35
preceded by stop codons in all three reading frames. The assembled MCAP
cDNA encodes a protein of 1,400 amino acids, which we designated MCAP
(mitotic chromosome-associated protein). It has two bromodomains in the N-terminal region and an ET domain in the more C-terminal region, a
characteristic feature of the BET subgroup of the bromodomain superfamily (Fig. 1A)
(21, 50). This subgroup includes the human RING3,
Drosophila FSH, and yeast BDF1/BDF2. Similar to other members of the BET subgroup, the MCAP bromodomains contain a core motif
and flanking motifs (14, 21), which likely form a helical bundle (8). MCAP carries a stretch of amino acids homologous to the "kinase like motifs" described for RING3 (6). As
shown in Fig. 1B, four mammalian cDNAs show homology with MCAP: HUNK1, RING3 (Fsrg1), BRDT, and ORFX (24, 43, 49, 51). MCAP
shows highest homology to the uncharacterized human cDNA HUNK1
(y12059) and to cosmids (R28194 and R31546 [GenBank accession no.
AC003111 and AC004798]). The HUNK1 cDNA, however, encodes a protein of
722 amino acids, much smaller than MCAP.


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FIG. 1.
Amino acid sequence and chromosomal mapping of murine
MCAP. (A) Predicted amino acid sequence of MCAP. A single open reading
frame containing 1,400 amino acids was derived from a 5,281-bp cDNA.
Two bromodomains (BDI and BDII) are shaded (black; core motif; light
gray; flanking motif). The dark gray box represents the ET domain. (B)
Comparison with other BET subgroup members. The number in italics below
each motif represents the percent amino acid homology with MCAP; an
asterisk indicates a kinase-like motif; H indicates a predicted helix.
(C) FISH mapping of MCAP to murine chromosome 17. Normal male mouse
metaphase chromosomes showing two signals (arrows) were visualized with
fluorescein isothiocyanate (green dots) and counterstained with 4',
6-diamidino-2-phenylindole (DAPI) (blue). The inset reveals chromosome
17 in the inverted DAPI image and ideogram for chromosome 17. The
position of the hybridization signal was determined by alignment of
band B. Note that two signals can also be seen in the interphase
nucleus.
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In vitro translation of full-length MCAP cDNA produced a protein of
approximately 200 kDa, larger than the deduced molecular
mass of 155 kDa. A posttranslational modification or a protein
secondary structure
may account for the difference (see below).
Northern blot analysis
revealed a single RNA species of ~6.5 kb,
ubiquitously expressed in
mouse adult and embryonic tissues and
in human cells (not
shown).
The murine MCAP gene is mapped to chromosome 17.
Genetic
mapping of the murine MCAP gene was done by FISH analysis. A
biotinylated 18-kb genomic fragment of MCAP was hybridized to normal,
mitogen-stimulated male spleen cells. A clear single hybridization
signal was detected on the distal region of band B, chromosome 17, in
the vicinity of the complement component 3 (C3) locus (Fig. 1C). This
region is syntenic to human chromosome 19, in which the human homologue
HUNK1 has been mapped. It is of note that mouse RING3 (Fsrg1) is also
localized on chromosome 17, but within the major histocompatibility
complex (2, 50), located proximal to the C3 locus.
MCAP is a nuclear protein broadly expressed in mouse tissues.
Immunoblot analysis was performed using two antibodies raised against a
N-terminal or C-terminal region of MCAP. As shown in Fig.
2, both antibodies revealed a 200-kDa
protein expressed in the nuclear fraction of all mouse tissues tested.
MCAP was expressed at the highest levels in spleen and thymus;
expression was lower in liver and brain. The antibodies also reacted
with a 200-kDa nuclear protein in cultured cells, e.g., mouse P19 and human HeLa cells (Fig. 2). In all cases no other bands were detected, in agreement with a single RNA species. The cytoplasmic fractions were
devoid of antibody reactivity (not shown; see Fig. 4). The antibodies
also immunoprecipitated a 200-kDa protein from in vitro-translated MCAP as well as from nuclear extracts of various cells (not shown).

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FIG. 2.
MCAP protein expression detected by immunoblot analysis
using anti-MCAP antibody with 10 µg of nuclear extracts from adult
mouse tissues, HeLa cells, or P19 cells. S. Intestine, small
intestine.
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MCAP expression is enhanced by growth-stimulatory signals and
repressed by growth-inhibitory signals.
Data in Fig. 2 suggested
that MCAP expression correlated with the presence of proliferating
cells in tissues. To examine whether MCAP expression is linked to cell
proliferation, we first tested mitogen-stimulated lymphocytes. Mouse
spleen cells were stimulated by bacterial LPS or ConA, a B-cell- or
T-cell-specific mitogen, respectively, and MCAP expression was tested
by RT-PCR and immunoblot assays. As shown in Fig.
3A and B, untreated lymphocytes expressed very low levels of MCAP, as the majority of cells were quiescent. However, within 6 h of treatment with either mitogen, MCAP
expression was markedly increased at both RNA and protein levels (Fig.
3A and B). The protein levels reached maximum at 6 h and persisted until 24 h. A slight increase in untreated cells at 12 and 24 h was presumably due to activation of some cells by serum factors. Expression of TFIIB, tested as a control, remained at a constant level
in these cells (Fig. 3B). To assess a relationship between MCAP
expression and DNA synthesis, we examined the kinetics of [3H]thymidine ([3H]TdR) incorporation. As
seen in Fig. 3C, [3H]TdR incorporation was at a
background level 6 and 12 h after stimulation when MCAP protein
expression was already at maximum. An increase in [3H]TdR
uptake was detected only at 24 h, after which levels remained high
for an additional 24 h. Thus, the onset of DNA synthesis lagged behind that of MCAP expression. These results indicate that
MCAP is induced by mitogen stimulation during the
G0/G1 transition in lymphocytes, prior to the
entry into S phase.

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FIG. 3.
MCAP expression is linked to cell growth. (A) Induction
of MCAP RNA in mitogen-stimulated lymphocytes. Spleen cells were
stimulated by indicated mitogens for 6 h, and MCAP transcripts
were detected by semiquantitative RT-PCR. HPRT transcripts were tested
as a control for RNA loading. (B) Induction of MCAP protein in
mitogen-stimulated lymphocytes. Nuclear extracts (2.5 µg) from spleen
cells stimulated by indicated mitogens were analyzed for MCAP
expression by immunoblot assay. TFIIB was tested as a control for
protein loading. (C) [3H]TdR uptake. Spleen cells
stimulated by mitogens were labeled with 1 µCi of
[3H]TdR at indicated times for 2 h. Values represent
averages of triplicate determinations. (D) Inhibition of MCAP protein
expression following IL-3 withdrawal. 32D cells were grown in the
presence (lane 1) or absence (lane 2) of IL-3 for 6 h, or IL-3 was
added back for 4 or 18 h (lanes 3 and 4). Nuclear extracts (5 µg) were analyzed by immunoblot assay. (E) Down-regulation of MCAP
protein expression in P19 cells after RA treatment. Nuclear extracts
(10 µg) from P19 cells treated with 1 µM of all-trans RA
for indicated days were analyzed by immunoblot assay.
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Next, we evaluated MCAP expression in an opposite situation, where cell
growth was arrested by growth factor deprivation.
Immunoblot analysis
was performed with 32D myeloid progenitor
cells that underwent growth
arrest upon IL-3 withdrawal (
47)
(Fig.
3D). In the presence
of IL-3, MCAP was expressed at high
levels in 32D cells (lane 1);
within 6 h after IL-3 withdrawal,
expression was completely
extinguished (lane 2). MCAP expression
resumed when IL-3 was added back
to the medium (lanes 3 and
4).
We also tested MCAP expression in RA-treated P19 embryonal carcinoma
cells, which underwent growth inhibition concurrent with
the induction
of differentiation (
19). As seen in Fig.
3E, MCAP
levels
were high in rapidly proliferating, untreated P19 cells,
but steadily
decreased during 4 days of RA treatment. These results
indicate that
MCAP expression is regulated by growth-stimulatory
and
growth-inhibitory signals in opposite
ways.
MCAP localizes on noncentromeric regions of mitotic
chromosomes.
Consistent with the Western blot data above, indirect
immunofluorescent staining of P19 cells detected MCAP in the nucleus but not in the cytoplasm (Fig. 4A).
During interphase MCAP was uniformly distributed in the nucleus
with the exception of nucleoli. However, in mitotic cells, MCAP was
detected almost exclusively on condensed chromosomes (Fig. 4A, a and
b). Chromosomal localization of MCAP was likewise detected on mitotic
HeLa cells and 32D cells (not shown). In well-spread metaphase
preparations (Fig. 4B), almost the entire length of chromosomes was
intensely stained with anti-MCAP antibody. However, MCAP staining was
distinctly absent from the centromeres, which showed brighter DNA
staining than the rest of chromosomes (Fig. 4B, inset).


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FIG. 4.
Localization of MCAP on mitotic chromosomes. (A)
Indirect immunofluorescent staining of P19 cells. P19 cells were fixed
with paraformaldehyde and stained with antibodies against MCAP (N-MCAP)
(a), CBP (c), or Sp1 (e) and counterstained with Hoechst 33342 (b, d,
and f). In image a, MCAP is present on mitotic chromosomes in two
mitotic cells (arrows); in images c and e, CBP and Sp1 are dispersed
into the cytoplasm and are absent from mitotic chromosomes. All three
factors are present in the interphase nuclei. The bar in image F
corresponds to 10 µm. (B) Absence of MCAP from centromeres. P19 cells
treated with hypotonic buffer were stained with anti-MCAP antibody and
counterstained with Hoechst 33342 as above. Note that the entire axis
of chromosomes is stained with MCAP except for the centromeres
(arrows). The inset is an example of a chromosome showing the absence
of MCAP from the centromeres at the end of chromosomes that are
intensely stained with Hoechst (arrows).
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In mammalian cells, a number of transcription factors and regulatory
proteins are displaced from chromosomes during mitosis,
which coincides
with global transcriptional repression (
29,
33,
38,
45). In
accordance, we found that both Sp1 and CBP,
a DNA-binding transcription
factor and general coactivator, respectively,
were dispersed into the
cytoplasm during mitosis, while they were
localized in the nucleus
during interphase (Fig.
4A, c to f).
We noted that several other
transcription factors are also dispersed
into the cytoplasm during
mitosis in P19 cells (not shown). These
results indicate that MCAP is
held onto mitotic chromosomes during
when many regulatory factors are
released into the
cytoplasm.
MCAP staining during mitosis.
Figure
5A shows immunostaining of MCAP at
different stages of mitosis. In prophase when heterochromatic regions
of chromosomes began to condense, MCAP was evenly distributed in the
nucleus. In the subsequent prometaphase, MCAP localization to the
chromosomes became evident as chromosomal condensation intensified. At
this point, MCAP showed little residual staining elsewhere in the cell. In metaphase, MCAP staining remained on fully condensed chromosomes that were assembled on the equatorial plate and attached to the spindles. In anaphase and telophase when sister chromatids separated, MCAP was still detected on the segregating chromosomes. Thus, MCAP-chromosome association becomes visible following the onset of
early chromosomal condensation and persists until the end of mitosis.

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FIG. 5.
Fine timing of MCAP chromosome staining. (A) P19 cells
were stained with anti-MCAP antibody, Hoechst 33342, and
anti- -tubulin antibody. Arrows in prophase indicate condensing
chromosomes. At this stage, MCAP distribution is uniform over the
entire nucleus. In prometaphase, centrioles move toward the opposite
poles (arrowheads), the nuclear membrane breaks down, and chromosome
condensation increases (arrow). At this stage, chromosomes begins to be
stained with MCAP antibody (arrow). During metaphase, MCAP is found
entirely on fully condensed chromosomes that were assemble on the
metaphase plate. MCAP remains on chromosomes in anaphase, when they are
pulled apart in two daughter cells. The bar corresponds to 3.5 µm.
(B) Colocalization analysis with phospho-histone H3. P19 cells were
stained with antibody to phospho-histone H3, MCAP, or Hoechst 33342. In
G2 and prophase, phospho-histone H3 localizes on the
pericentric heterochromatin regions, which condense early and are seen
as large dots (arrows in G2 and prophase). MCAP is
uniformly distributed over the nucleus at these stages. When cells
reach prometaphase and move from metaphase to anaphase, phospho-histone
H3 staining spreads over the entire, fully condensed chromosomes,
overlapping MCAP staining (arrows).
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The above results raised the possibility that MCAP selectively
localizes to the region of chromosomes that condense relatively
late.
Chromosomal condensation proceeds in a nonrandom, spatiotemporal
order
which can be monitored by the timing of histone H3 phosphorylation
(
16,
53). Histone H3 phosphorylation starts first at the
pericentromeric
heterochromatin and then extends to other parts of the
chromosomes.
We compared the timing of histone H3 phosphorylation with
that
of MCAP-chromosome association. As shown in Fig.
5B, a prominent
dot-like staining of phospho-histone H3 was seen in G
2 and
prophase
nuclei, corresponding to the sites of early chromosomal
condensation.
Staining of MCAP at those stages remained diffuse
throughout the
nuclei, without specifically colocalizing with
phospho-histone
H3. MCAP staining matched that of phospho-histone
H3 only after
the latter spread to the rest of the chromosomes,
which began
in prometaphase. These results, together with the absence
of MCAP
on the centromeres (Fig.
4B), suggest that MCAP predominantly
associates with the late-condensing regions of the chromosomes
rather
than the early-condensing heterochromatic
regions.
Localization of GFP-MCAP on mitotic chromosomes.
Chromosomal
association of the endogenous MCAP observed above prompted us to
investigate localization of an exogenously expressed MCAP. HeLa or NRK
cells were transfected with a construct containing GFP-MCAP, and GFP
distributions were analyzed in a series of z sections, which were
reconstructed to three-dimensional images (Fig.
6A). Similar to the endogenous MCAP,
GFP-MCAP was detected in the interphase nucleus as fine grains
distributed evenly from the periphery to the center, except for
nucleoli (Fig. 6A, left). On the other hand, during mitosis, GFP-MCAP
signals smoothly outlined the condensed chromosomes (Fig. 6A, right).
These observations confirm that MCAP is uniformly distributed in the
nucleus during interphase and associates with chromosomes during
mitosis.

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|
FIG. 6.
(A) Three-dimensional reconstruction of GFP-MCAP
localization in living cells. Three-dimensional images were
reconstructed with serial z sections of HeLa or NRK cells to visualize
the distribution of MCAP-GFP in the interphase (left) and in mitosis
(right). (B) Mobility of MCAP by FRAP analysis. HeLa cells were
transfected with GFP-MCAP or histone H2B-GFP, and recovery of
fluorescence in interphase was analyzed. (C) Biochemical solubility of
MCAP. Homogenates from asynchronous or mitotic HeLa cells were
extracted with indicated concentrations of NaCl. Supernatants and
pellets were analyzed by immunoblot analysis. Each lane was loaded with
extract proteins equivalent to 105 cells.
|
|
FRAP and biochemical analysis.
To test whether MCAP is a
stable component of chromatin, we used FRAP (10). This
method has been used to measure mobility of intracellular molecules by
the recovery of fluorescent signals after brief laser irradiation.
Several previous papers on studies using this method reported that
chromatin in interphase nuclei is relatively immobile and may be
anchored as a defined structure (1, 28). On the other hand,
recent reports on photobleaching of the high-mobility-group proteins
and glucocorticoid hormone receptor (31, 39) indicate that
chromatin-bound proteins can recover relatively rapidly after bleach.
Thus, if MCAP is very strongly immobilized on chromatin, its exchange
might be slow. FRAP analysis was performed with GFP-MCAP transfected in
HeLa cells (used for Fig. 6). To compare the mobility of MCAP with that
of a known chromatin component, histone H2B-GFP was analyzed in
parallel. A 4-µm2 strip through the nucleus was
photobleached, and recovery of fluorescence into this area was recorded
until the intensity reached a stable plateau. As shown in Fig. 6B,
GFP-MCAP fluorescence was reduced to background levels immediately
after photobleaching but recovered ~86% of its intensity within 1 min. By contrast, histone H2B-GFP did not recover any fluorescence over
this period. These results indicate that while histone H2B, a stable
component of chromatin is immobile, the majority of GFP-MCAP is capable of exchanging with a half-life of ~4 s within the interphase nucleus. The relatively small but significant immobile fraction (~14%) of
GFP-MCAP may represent a more tightly chromatin-bound pool of the protein.
To further investigate MCAP-chromatin association, we examined the
solubility of endogenous MCAP by differential salt extractions.
Asynchronously growing HeLa cells or those synchronized to M phase
were
extracted by buffer containing increasing NaCl concentrations.
The
presence of MCAP in the soluble and insoluble fractions was
tested by
immunoblot analysis (Fig.
6C). With the lowest salt
concentration
(100 mM NaCl), approximately half of MCAP was present
in the
soluble fraction, with the rest in the insoluble fraction.
But with
higher NaCl concentrations (200 and 300 mM), most of
MCAP was in the
soluble fraction. The profile of salt solubility
was essentially the
same for asynchronous and mitotic cells. As
expected, the general
transcription factor TFIIB was found in
the soluble fraction, while
histone H3 was in the insoluble fraction
at all NaCl concentrations
tested. These results are in agreement
with FRAP data above, and
indicate that MCAP loosely interacts
with chromatin during interphase
as well as mitosis. Consistent
with these findings, MCAP did not
exhibit a strong binding affinity
for double-stranded or
single-stranded DNA in
vitro.
Microinjection of anti-MCAP antibody inhibits cell cycle
progression to mitosis.
As an initial step to delineate the
function of MCAP, we studied the effect of anti-MCAP antibody
microinjection on cell cycle progression in HeLa cells. Cells
synchronized by double-thymidine block were released and allowed to
proceed through cell cycle. The diagram in Fig.
7A
shows the timing of microinjection and an example of cell cycle
profiles monitored during the experiments by FACS analysis. Anti-MCAP
IgG was injected into the nuclei when cells were at S or in
G2. Normal IgG from preimmune sera was injected as a
control. In each experiment, IgG was injected into 25 to 40 nuclei.
Cells were then allowed to proceed in culture until they reached
mitosis. After being fixed, the cells were stained with anti-rabbit
antibody coupled to biotin-streptavidin-Cy3 to distinguish injected
cells from uninjected ones and with Hoechst 33342 to detect mitotic
cells. Although some cells died soon after injection due to physical
shock or injury, about 70% survived until the end of experiments.
Table 1 shows the number of cells that
successfully reached mitosis in four separate experiments. In the
control groups where cells were injected with preimmune IgG,
approximately 40% of cells were in mitosis as judged by Hoechst staining, irrespective of whether IgG was injected in S or
G2 phase. In contrast, almost no mitotic cells were
observed in the groups injected with anti-MCAP IgG regardless of
growth phase (S or G2), indicating that anti-MCAP antibody
inhibited entry into mitosis. Figure 7B shows injected IgG and DNA in
the cells. In the preimmune IgG-injected group (Fig. 7B, a and
b), three cells were in anaphase/telophase and one was in
metaphase. An uninjected cell which was in metaphase was used as a
control. In the group injected with anti-MCAP IgG (Fig. 7B, c and d),
four injected cells had a large interphase nucleus, indicative of cells in G2, but none in mitosis. These cells did not even
exhibit an early sign of mitosis, as evidenced by the lack of
condensing chromosomes, consistent with the idea that MCAP antibody
inhibited the entry into mitosis. Although some cells escaped
synchronization, ~40% of uninjected cells were in mitosis, similar
to the control groups. The paucity of mitotic cells in the anti-MCAP
IgG-injected groups was unlikely to be due to a delay in mitosis,
because no mitotic cells with anti-MCAP antibody stain were detected
when cells were cultured for additional 4 h and mitotic cells were monitored every hour (not shown). It was not due to the acceleration of
G2/M phase either, since no newly divided cells with
antibody stain were detected in the MCAP antibody-injected groups.



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FIG. 7.
Anti-MCAP antibody injection inhibits the entry into
mitosis. (A) Diagram of microinjection experiments. HeLa cells were
synchronized by double-thymidine block and released. The lower panel
represents a typical cell cycle profile monitored by FACS analysis.
Anti-MCAP IgG (N-MCAP) or preimmune IgG was injected into the nuclei at
S or G2 phase, and cells were allowed to proceed through
mitosis. Cells were fixed, stained with the second antibody, and
counterstained with Hoechst 33342. (B) Morphology of injected cells. (a
and b) Cells injected with preimmune IgG. Arrowheads, mitotic cells
stained with second antibody; *, interphase cell stained with antibody
(escaping synchronization); #, uninjected cell in mitosis. (c and d)
Cells injected with anti-MCAP antibody. Arrows, cells injected with
anti-MCAP IgG which failed to enter into mitosis; *, uninjected cell
in interphase; #, uninjected cells which proceeded to mitosis. The bar
indicates 8 µM. (C) Anti-MCAP IgG injection does not abrogate ongoing
DNA synthesis. Cells in S phase were injected with anti-MCAP IgG and
then incubated with 10 µM BrdU for 1 h and allowed to proceed as
for panel A. Cells were stained for injected IgG, BrdU, and DNA. (a)
Cell injected with anti-MCAP antibody that incorporated BrdU; (b) cell
injected with anti-MCAP antibody that was out of synchrony and failed
to incorporate BrdU (a control for BrdU staining). (c) Uninjected cells
which incorporated BrdU and proceeded through mitosis, tested as a
control for the intensity and pattern of BrdU staining. The bar
corresponds to 6 µm.
|
|
It was of importance to assess whether injection of anti-MCAP IgG into
S-phase cells abolished ongoing DNA synthesis. To address
this
question, cells injected with anti-MCAP IgG were pulse-labeled
with
BrdU for 1 h. Cells were allowed to continue growth as described
above. BrdU uptake was monitored by anti-BrdU monoclonal antibody.
Shown in Fig.
7C (row a) is an example of a cell injected with
anti-MCAP IgG. This cell, while arrested prior to mitosis, incorporated
BrdU. BrdU staining was absent in the nucleoli, similar to that
of
normal, uninjected cells (Fig.
7C, row c). These results show
that
anti-MCAP IgG, when injected into S-phase cells, inhibited
mitosis
without completely abrogating ongoing DNA synthesis. Results
with
G
2 cells indicate that anti-MCAP antibody interfered with
mitotic entry; however, an additional possibility that anti-MCAP
antibody interferes with the completion of DNA replication cannot
be
excluded.
 |
DISCUSSION |
We describe a novel mammalian protein MCAP that associates with
mitotic chromosomes and regulates cell cycle progression from G2 to M. MCAP belongs to the poorly understood BET subgroup
of the bromodomain superfamily. It carries two bromodomains and an ET
domain, both of which are conserved from yeasts to humans (14, 21).
Both the endogenous MCAP and transfected GFP-MCAP localized on
chromosomes during mitosis. Association of MCAP with
mitotic chromosomes became visible in prometaphase and persisted until chromosomes were decondensed in two daughter cells. The specific chromosomal localization was noteworthy, since it occurred when many chromatin-associated regulatory proteins were released into the cytoplasm.
Interestingly, FRAP analysis and biochemical experiments (Fig. 6)
suggested that MCAP is not a rigid structural component of chromatin
but rather is associated with chromatin in a more flexible way during
both interphase and mitosis. It is likely that MCAP is held onto
chromatin not through a tight binding to DNA but through a
protein-protein interaction. In view of a recent structural study and
the proposed chromatin-targeting role of the bromodomain (8,
57), association of MCAP with chromatin may be mediated by one or
both of the bromodomains in MCAP. However, it is important to note that
not all bromodomain proteins are capable of associating with mitotic
chromosomes, since proteins of the SWI/SNF subgroup as well as CBP,
both carrying a bromodomain, are released into the cytoplasm during
mitosis (33) (Fig. 4A). Interaction with mitotic chromosomes
may be a property shared among proteins of the BET subgroup, because
(i) the yeast BDF1 is shown to localize to chromosomes (3)
and (ii) we have obtained evidence that the murine RING3 also localizes
to mitotic chromosomes (F. Chitsaz and K. Ozato, unpublished data).
A role in cell cycle regulation.
Our observations that
antibody injection causes a strong G2 arrest indicate that
MCAP plays a critical role in entry into mitosis (Fig. 7; Table 1). The
cyclin B-cdc2 complex is a key regulator of the onset and completion of
mitosis. This complex controls many mitotic events, including
chromosomal architecture, spindle formation, and nuclear membrane
breakdown (25, 36, 37). The cyclin B-cdc2 complex is
activated during G2/M as it translocates from cytoplasm to
nucleus (52). In this period, some cyclin B-cdc2 complexes
are reported to localize to mitotic chromosomes (40). It is
possible that MCAP plays a role in regulating the activity of cyclin
B-cdc2 during mitosis. However, at present it is not clear whether
MCAP has a direct role in activation of the cyclin B-cdc2 complex.
In view of the finding that MCAP-antibody injected cells were
arrested prior to mitosis, MCAP is likely to affect an event(s)
occurring prior to chromosomal condensation. In addition, since
chromosomal localization becomes visible during condensation,
MCAP may
contribute in some way to the condensation process itself.
On the other
hand, in view of the antibody-induced cell cycle
arrest and the
prometaphase onset of chromosomal association,
it seems less likely
that MCAP regulates post condensation events
such as spindle
attachment, cohesin breakdown, or chromosomal
segregation. A number of
proteins that regulate chromosomal dynamics
during mitosis have been
identified, including SMC family proteins,
phospho-histone H3, and
topoisomerase II (
13,
18,
20,
22,
55,
58). At present,
whether MCAP regulates activities of
any of these proteins is
uncertain.
We found that MCAP expression is linked to cell proliferation; it was
induced by growth stimulation and repressed by growth
arrest signals
(Fig.
3). In lymphocytes, expression was induced
during
G
0/G
1 transition, prior to the entry into S
phase, although
MCAP was seen in all stages of cell cycle in
continuously growing
cells. This expression pattern suggests that the
activity of MCAP
may not be limited to the G
2/M stage. Our
recent observations
are consistent with the view that MCAP has a
more integral role
in coordinating the overall cell growth
program (T. Maruyama and
K. Ozato, unpublished
data).
Spatial specificity of MCAP localization: a role in mitotic
regulation of transcription?
MCAP-chromosome association became
visible at a time when transcription factors are displaced from
chromatin, an event characteristic of mitosis in higher eukaryotes.
These changes are shown to coincide with the abrupt and general
cessation of transcription (12, 29, 33, 38, 41, 45). We
noted that MCAP-chromosome association has a distinct spatial
specificity in that (i) MCAP did not specifically colocalize with the
pericentric heterochromatin, the sites of early histone H3
phosphorylation and early chromosomal condensation, and (ii) MCAP was
absent from the centromeres (Fig. 4B and 5B). Centromeres are rich in
repetitive DNA sequences e.g.,
-satellite, which constitute
heterochromatin (34), where transcription is generally
repressed in an epigenetically inherited manner (56). These regions replicate late during S phase but condense early during
mitosis (5). Our results suggest that MCAP associates predominantly with the regions of chromosomes containing euchromatin and less with heterochromatin.
The liberation of factors from chromosomes during mitosis is thought to
provide a ground for reprogramming a new pattern of
transcription.
Along this line of thinking, mitosis is thought
to be associated with a
mechanism to mark actively transcribed
regions of the genome, ensuring
the resumption of properly controlled
gene expression in newly divided
cells (
32). Molecular processes
leading to gene marking,
however, have yet to be elucidated. Relevant
to this issue, mammalian
polycomb proteins, involved in transcriptional
repression of
heterochromatin, also localize to mitotic chromosomes,
and this process
is thought to have a role in epigenetic inheritance
of repressed
chromatin (
44). In light of the spatial specificity
of MCAP
localization, it may be tempting to envisage that MCAP
has a role in a
gene marking process. At present, however, we
do not have sufficient
evidence to assign MCAP such a
role.
In conclusion, we describe a novel cell cycle regulator that possesses
conserved bromodomain motifs. Further studies of this
and related
factors may elucidate the mechanisms regulating cell
division and gene
expression.
 |
ACKNOWLEDGMENTS |
We thank M. Lonergan and K. Cheng for assistance in library
screening, K. J. M. Zaal for microinjection, K. Mahon and P. Love for gifts of libraries, and N. Bhatia-Dey for useful suggestions, as well as B. Howard and M. DePamphilis for critical reading of the manuscript.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Laboratory of
Molecular Growth Regulation, National Institute of Child Health and
Human Development. Bldg. 6, Rm. 2A01, National Institutes of Health, Bethesda, MD 20892-2753. Phone: (301) 496-9184. Fax: (301) 480-9354. E-mail: ozatok{at}nih.gov.
Present address: Gene Expression and Cell Biology/Biophysics
Programmes, European Molecular Biology Laboratory, Heidelberg, Germany.
Present address: Keio University School of Medicine, Shinjuku-ku,
Tokyo 160-8582, Japan.
 |
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