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Molecular and Cellular Biology, September 2001, p. 5889-5898, Vol. 21, No. 17
0270-7306/01/$04.00+0 DOI: 10.1128/MCB.21.17.5889-5898.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Loss of HuR Is Linked to Reduced Expression of
Proliferative Genes during Replicative Senescence
Wengong
Wang,1
Xiaoling
Yang,1
Vincent J.
Cristofalo,2
Nikki J.
Holbrook,1 and
Myriam
Gorospe1,*
Laboratory of Cellular and Molecular Biology,
National Institute on Aging-Intramural Research Program, National
Institutes of Health, Baltimore, Maryland
21224,1 and Lankenau Institute for
Medical Research and Thomas Jefferson University, Wynnewood,
Pennsylvania 190962
Received 1 May 2001/Accepted 25 May 2001
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ABSTRACT |
Cellular aging is accompanied by alterations in gene expression
patterns. Here, using two models of replicative senescence, we
describe the influence of the RNA-binding protein HuR in regulating the
expression of several genes whose expression decreases during senescence. We demonstrate that HuR levels, HuR binding to target mRNAs
encoding proliferative genes, and the half-lives of such mRNAs are
lower in senescent cells. Importantly, overexpression of HuR in
senescent cells restored a "younger" phenotype, while a reduction
in HuR expression accentuated the senescent phenotype. Our studies
highlight a critical role for HuR during the process of replicative senescence.
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INTRODUCTION |
Human diploid fibroblasts exhibit a
finite life span in culture. Following a limited number of cell
divisions, they exit the cell cycle and may remain viable for long
periods in a state known as replicative senescence (3). As
this process is thought to reflect aspects of organismal aging,
human primary cells have been used extensively to study cellular
proliferation, immortality, and growth arrest. Over the years, and
employing a variety of model systems, investigators have reported
collections of genes whose expression levels are altered in
senescent cells relative to young cells. Examples of genes whose
expression is elevated in senescent cells are those for
p16INK4, p21CIP1, cyclins
D1 and E, APP, endothelin-1, fibronectin, interleukin-1, Cu,
ZnSOD, GADD45, PAI-1, PAI-2, SPARC, IGFBP-3, collagenase, macrophage colony-stimulating factor, p53, bcl-2, and
p33ING1. Examples of genes whose expression is
reduced in senescent cells are those for cyclin A, cyclin B1, cyclin H,
CAK, cdc2, MnSOD, c-fos, catalase, EPC-1, E2F-1, E2F-2, DP-1, elastin,
thymidine kinase, IGF-II, egr-1, granulocyte-macrophage
colony-stimulating factor, dihydrofolate reductase, PCNA,
ribonucleotide reductase, and histones (2, 16, 21, 22, 26, 31,
33; for reviews, see references 4, 5, 14, 32, and
37).
Many investigators have postulated the existence of common regulatory
mechanisms to account for such senescence-related alterations in gene
expression. While a number of transcriptional regulators contributing
to age-dependent gene expression have been identified, their influences
on the senescent phenotype are not fully understood (8, 15, 20,
24). Based on the increasingly recognized participation of
posttranscriptional regulatory mechanisms and the observation that many
senescence-associated genes bear AU-rich elements, which are
known targets of regulated mRNA turnover, in their 3'
untranslated regions (UTRs), we hypothesized that their orchestrated
expression may be regulated, at least in part, through coordinate
alterations in mRNA stability. Alterations in mRNA stability
require the association of the mRNAs with RNA-binding proteins that either enhance or reduce their stabilities. Many RNA-binding proteins have been described, but only a few
them, including the Elav (embryonic lethal abnormal visual)/Hu and AUF1 protein family, have been reported to affect mRNA half-life. The Elav/Hu family of RNA-binding proteins, including the ubiquitously expressed HuR and the neuronal-specific Hel-N1, HuC, and HuD, have been
found to bind to critical mRNAs containing AU-rich elements (e.g.,
GLUT-1, c-myc, GAP-43, c-fos, PAI-2, VEGF, and p21 [10, 11, 25,
34, 35]) and either stabilize them, enhance their translation,
or both (10, 11, 25). By contrast, AUF1 has generally been
associated with enhanced mRNA turnover (6, 19).
We previously described the stress-triggered stabilization of the
mRNA encoding the cyclin-dependent kinase (cdk) inhibitor p21
through complexing with the mRNA-binding protein HuR and
subsequently reported that mRNAs encoding cyclins A and B1 are
targeted and stabilized by HuR in a cell cycle-regulated fashion
(34, 35). Here, we employ two established model systems of
cellular senescence: in vitro passage of WI-38 human diploid
fibroblasts (13) and the IDH4 human fibroblast model
developed by Shay and colleagues, where the normal limitation of life
span can be reversibly bypassed through inducible expression of the
simian virus 40 (SV40) large T antigen (38). We report
that senescent cells in both models had lower HuR levels; exhibited
decreased binding to transcripts of c-fos, cyclin A, and cyclin B1; and
displayed reduced stability and steady-state levels of the respective
mRNAs, suggesting that reduced HuR binding to these mRNAs
contributes to their lower expression with aging. Strikingly, transient
overexpression of HuR in IDH4 cells restored a "younger" phenotype,
while antisense-RNA-mediated reduction in HuR levels led to a more
pronounced "old" phenotype. Our findings provide evidence that HuR
serves to regulate the turnover of genes whose expression is
coordinately downregulated during replicative senescence. Thus, a
reduction in HuR during replicative senescence contributes directly to
the senescent phenotype.
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MATERIALS AND METHODS |
Cell culture, cell transfections, and assessment of
3H-thymidine incorporation, fluorescence-activated cell
sorter (FACS) distribution, and senescence-associated
-galactosidase
(SA-
-gal) activity.
Human diploid IDH4 fibroblasts (generously
provided by J. W. Shay) and early-passage (
28 population
doublings [pdl]) and late-passage (
60 pdl) human diploid WI-38
fibroblasts were cultured in Dulbecco's modified essential medium
(Gibco-BRL, Gaithersburg, Md.) supplemented with 10% fetal bovine
serum. Skin biopsy-derived human diploid fibroblasts were obtained from
the CORIELL Cell Repositories (Camden, N.J.). The samples included
fibroblasts from nine young individual donors (15 to 30 years old) and
from nine elderly individual donors (80 to 94 years old). The cells were cultured in Dulbecco's modified essential medium plus 10% fetal
bovine serum for approximately 3 to 4 pdl to obtain enough material for
Western blot analysis. IDH4 cell culture medium was further
supplemented with 1 µM dexamethasone (dex) for constitutive expression of SV40 large T antigen to suppress senescence and induce
proliferation (38). To induce senescence of IDH4 cells, dex was removed from the culture media (and regular serum was replaced
with charcoal-stripped serum), and the cells were assessed at different
times (3 to 8 days) thereafter. Constructs pZeoSV2(
)HuR(S) and
pZeoSV2(
)ASHuR (antisense) were previously described
(17). All transfections were transient and were carried
out using lipofectamine (Gibco-BRL), following the manufacturer's
recommendations. This procedure resulted in a transfection efficiency
of 75 to 90% based on parallel transfections using a green fluorescent
protein-expressing plasmid.
For assessment of SA-
-gal activity, cells were seeded in
30-mm-diameter dishes, cultured in medium without dex for different lengths of time, and then fixed with a 3% formaldehyde solution. The
cells were then washed and incubated with SA-
-gal staining solution
(1 mg of X-Gal
[5-bromo-4-chloro-3-indolyl-
-D-galactopyranoside]/ml, 40 mM citric acid-sodium phosphate buffer [pH 6.0], 5 mM
ferrocyanide, 5 mM ferricyanide, 150 mM NaCl, and 2 mM
MgCl2) from 4 h to overnight to
visualize SA-
-gal activity (7).
3H-thymidine incorporation assays and FACS
analysis were performed as described previously (35).
Northern and Western blot analysis.
Northern blot analysis
was carried out as previously described (12). Oligomers
complementary to human cyclin D1, p21, and 18S rRNA (18)
were 3'-end labeled using terminal transferase enzyme, while
PCR-generated fragments of cyclin A, cyclin B1, DP-1, gadd153, c-fos,
and
-actin cDNAs were random-primer labeled using Klenow enzyme; all
labeling reactions were carried out in the presence of
[
-32P]dATP. Signals on Northern blots were
visualized and quantitated with a PhosphorImager (Molecular Dynamics,
Sunnyvale, Calif.).
For Western blot analysis, 40 µg of cell lysate was resolved on
sodium dodecyl sulfate-polyacrylamide gels and transferred
onto
polyvinylidene difluoride membranes. HuR was detected with
the
monoclonal anti-HuR antibody 19F12 (
34); anti-AUF1
(
39)
and anti-BAF57c (
36) antibodies were
previously described. Monoclonal
anti-

-actin antibody was from Santa
Cruz Biotechnologies (Santa
Cruz, Calif.). Signals were detected with
the ECL reagent (Amersham)
and quantitated using a Personal
Densitometer (Molecular
Dynamics).
Preparation of cell fractions and radiolabeled transcripts.
Lysis of cells and preparation of whole-cell lysates as well as
cytoplasmic and nuclear fractions were carried out as described previously (34). For in vitro synthesis of all transcripts
(either unlabeled or radiolabeled), RNA from IDH4 cells was reverse
transcribed, and the cDNAs generated were used as templates in PCRs to
amplify the 3' UTRs of cyclin A, cyclin B1, cyclin E, and c-fos cDNAs, as described previously (34, 35). All 5' primers contained the T7 RNA polymerase promoter sequence (T7):
CCAAGCTTCTAATACGACTCACTATAGGGAGA. Oligonucleotides used to
amplify the 3' UTRs of cyclins A, B1, and E were described previously
(35); oligonucleotides (T7)GCAATGAGCCTTCCTCTGAC and CATTCAACTTAAATGCTTTTATTG were used to prepare the
c-fos 3' UTR (region 1246 to 2101).
Binding assays.
Electrophoretic mobility shift assays to
detect the formation of complexes between cellular proteins (10 µg of
either cytoplasmic or nuclear fractions) and various radiolabeled
transcripts (100,000 cpm of each RNA) were performed as described
previously (34). For competition assays, 5×, 10×, or
20× excess unlabeled transcript was used. For supershift analysis, 10 µg of cytoplasmic protein was incubated with 2 µg each of anti-HuR
antibodies or control antibodies recognizing p27, p38, and p53
(34).
cdk2 and cdc2 immunoprecipitation and kinase assays.
Immunoprecipitation-kinase assays were carried out as previously
described (12). cdk2 and cdc2 were immunoprecipitated from 200-µg
aliquots of lysate using either anti-cdk2 (Pharmingen) or anti-cyclin
B1 (Santa Cruz) antibodies, respectively. Kinase activities were
assayed using histone H1 (Ambion, Austin, Tex.) as a substrate and
quantitated with a PhosphorImager.
 |
RESULTS |
mRNAs encoding senescence-associated genes exhibit
different relative half-lives in young and senescent cells.
With rapidly accumulating experimental evidence that altered
mRNA turnover regulates important cellular processes, we set out to
investigate whether replicative senescence is also influenced by
altered mRNA degradation by using two established models. The first
consisted of standard in vitro passage of untransformed WI-38 human
diploid fibroblasts (13). The second was the IDH4 human
fibroblast model of reversible senescence developed by Wright and
colleagues (38). In this model, constitutive dex-driven SV40 large-T-antigen expression allows IDH4 cells to suppress senescence and continue to proliferate as young cells. However, they
can be induced to quickly undergo replicative senescence by removing
dex from the culture medium, resulting in the loss of large-T-antigen
expression (38). In each cell model, comparison of young
cells (dex-treated IDH4 cells and WI-38 cells at
28 pdl) with
senescent cells (IDH4 cells cultured without dex for 3 to 7 days and
WI-38 cells at
60 pdl) revealed that senescent cells had
considerably lower cdk activity, diminished rates of 3H-thymidine incorporation, and a reduced number
of S- and G2-phase cells. Likewise, a neutral
SA-
-gal activity that is largely absent from young cells
(7) was greatly elevated in the senescent cultures (Fig.
1). SA-
-gal activity is used as a
biomarker for replicative senescence, although the specific enzyme(s)
involved remains poorly characterized. When the expression of
senescence-regulated genes was studied (Fig.
2A), we observed that the cyclin D1
mRNA levels were moderately elevated in senescent cells,
while mRNAs encoding the cdk inhibitors p16 (not shown) and p21
were much higher in senescent cells, in accordance with previous
findings (9, 23, 27). Also in agreement with previous
reports, levels of mRNAs encoding cyclin A, cyclin B1, and c-fos
were greatly reduced in both senescent WI-38 (
60 pdl) and IDH4 cells
(7 days after dex was removed) (28, 30).

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FIG. 1.
Phenotypic characterization of IDH4 cells cultured in
the presence or absence of dex. IDH4 cells that were cultured in the
presence (Young) or absence (Sen.) of dex for 7 days
were subjected to FACS analysis, 3H-thymidine incorporation
assays, and assessment of cdk2- and cdc2-associated kinase activity
using histone H1 as a substrate (A) and to SA- -gal staining (B)
(left, representative fields; right, quantitation of
SA- -gal-positive IDH4 cells). The graphs represent the means + standard errors of the means of four independent experiments.
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FIG. 2.
Senescence-associated gene expression in WI-38 and IDH4
fibroblasts. (A) Northern blot analysis of expression of the genes
indicated using early-passage (Young; 28 pdl) and late-passage
(senescent [Sen.]; 60 pdl) WI-38 cells, as well as young
(dex-treated) and senescent (7 days after removing dex) IDH4 cells. (B)
Stabilities of cyclin A, cyclin B1, c-fos, and -actin mRNAs in
IDH4 cells that were either dex-treated [Young (+dex)] or cultured
without dex for 7 days [Senescent ( dex)] were assessed after the
addition of 2 µg of actinomycin D/ml; preparation of RNA at the times
indicated; measurement of cyclin A, cyclin B1, c-fos, and -actin
mRNA Northern blot signals; normalizing them to 18S rRNA; and
plotting them on a logarithmic scale (bottom). Dashed horizontal lines,
50% of untreated. The data represent the means ± standard errors
of the means of four independent experiments.
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In order to determine if these age-related differences in gene
expression were influenced by changes in the stabilities of
the
respective mRNAs, we examined mRNA half-life in young and
senescent populations after addition of actinomycin D. As shown
in Fig.
2B, proliferating (with dex) and senescent (without dex)
IDH4 cells
showed marked differences in the half-lives of mRNAs
encoding
cyclin A, cyclin B1, and c-fos. For these three mRNAs,
treatment
with actinomycin D resulted in faster transcript loss
in the
populations without dex, revealing that their stabilities
were lower in
senescent cells. These differences in mRNA stability
were specific
for a subset of genes, since the stabilities of
other genes studied
were unchanged. p21 mRNA stability did not
seem to differ between
proliferating and senescent populations,
despite elevated p21
expression with senescence. Similarly, the
gadd153 and

-actin
mRNAs showed no differences in stability as
a function of cell
senescence. Basal gadd153 was unchanged between
proliferating and
senescent IDH4 cells, while basal

-actin mRNA
levels were
moderately reduced in senescent cultures (Fig.
2B).
When the mRNA
half-lives were calculated, they were found to be
4 h (in
proliferating cells) versus 2 h (in senescent cells) for
cyclin A,
4.3 versus 2 h for cyclin B1, and 1.2 versus 0.5 h for
c-fos
(Fig.
2B, graph). By contrast, the

-actin mRNA half-lives
were
essentially the same in proliferating and senescent IDH4
cells (about
13 to 14 h). A similar assessment of mRNA half-life
in
early-passage and senescent WI-38 cells revealed comparable
differences, with young populations exhibiting longer half-lives
of
mRNAs encoding cyclin A, cyclin B1, and c-fos than did senescent
cells (not
shown).
HuR levels are lower in fibroblasts undergoing replicative
senescence and in skin biopsy fibroblasts from elderly
individuals.
Since mRNAs encoding c-fos, cyclin A, and cyclin
B1 have been reported to be targets of the RNA-binding protein HuR, and
their half-lives are known to increase upon HuR binding, we
investigated whether HuR levels change with senescence. As shown in
Fig. 3A, HuR expression was found to be
high in young cells but decreased significantly with replicative
senescence in both WI-38 and IDH4 cells. This decrease affected total
cellular HuR, with more pronounced reductions in cytoplasmic HuR than
in nuclear HuR. It was important to assess the levels of cytoplasmic
HuR because our earlier studies suggested that critical binding of HuR
to target mRNAs leading to their altered half-lives occurred in the
cytoplasm (34, 35). The quality of the subcellular
fractionation, as well as differences in loading and transfer among
samples, was monitored by hybridization with antibodies recognizing
-actin (a cytoplasmic protein) and BAF57c (a nuclear protein). As
depicted in Fig. 3B, reductions in HuR levels occurred gradually as
cells progressed towards senescence.

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FIG. 3.
HuR expression in young and senescent human fibroblasts.
(A) Western blot analysis of HuR expression in whole-cell (Total [20
µg]), nuclear (10 µg), or cytoplasmic (Cytopl. [40 µg])
lysates from either WI-38 or IDH4 populations (young or senescent
[Sen.], as described in the legend to Fig. 1A). Western blot
analysis of BAF57c and -actin expression served to assess the
quality of the cell fractionation procedure and to monitor differences
in loading and transfer among samples. Western blot signals were
quantitated and represented (graph) relative to the total protein
present in whole-cell lysates from young cells. Y, young; S,
senescent. (B) Western blot analyses depicting time-dependent
changes in total HuR expression in dex-depleted ( Dex) IDH4
cells or in WI-38 cells of the indicated number of population
doublings.
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We extended our analysis of HuR expression to skin fibroblasts obtained
from individual donors of different ages. As shown
in Fig.
4, HuR expression in fibroblasts derived
from young individuals
(15 to 30 years of age) was, on average, about
2.5-fold higher
than that seen in fibroblasts from elderly donors (80 to 94 years
of age). Although the growth of these fibroblast cultures
was
not formally measured, there was a good correlation between the
rate of cell growth and HuR expression levels: fast-growing cultures
(those derived from young donors and several of those derived
from
elderly donors) exhibited high levels of HuR expression,
with
slow-growing cultures (derived from elderly donors) showing
reduced HuR
expression. While this system has important limitations
(such as the
small sample sizes available for experimentation),
it provides evidence
suggesting that HuR expression may also be
altered during in vivo
aging.

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FIG. 4.
HuR expression in fibroblasts from skin biopsies from
young and elderly individuals. Western blot analysis of expression of
the proteins indicated was carried out using fibroblasts from skin
biopsies obtained from individual donors who were either young (15 to
30 years old) or aged (80 to 94 years old). The fibroblasts were
cultured in vitro for 3 to 4 pdl before Western blot analysis of
whole-cell lysates. The error bars represent standard errors of the
mean.
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HuR binding to target mRNAs decreases with senescence.
Lysates prepared from either young or senescent cells exhibited
abundant binding to radiolabeled RNAs comprising the 3' UTRs of
the cyclin A, cyclin B1, and c-fos transcripts (Fig.
5). As shown, for each transcript tested,
nuclear lysates prepared from young IDH4 cells exhibited essentially
the same binding pattern and intensity as did lysates prepared from
senescent cells (Fig. 5). Similar results were observed when WI-38
cells were used (not shown). Remarkably, however, proteins present in
cytoplasmic lysates prepared from young cells (both proliferating IDH4
and early-passage WI-38 cells) revealed much more extensive binding to
radiolabeled transcripts than did proteins present in cytoplasmic
lysates from senescent cells. That HuR was part of these
senescence-sensitive complexes was evidenced by the ability of an
anti-HuR antibody to supershift some of the protein-RNA associations,
while antibodies directed to unrelated proteins did not produce
supershifts (Fig. 5). These age-dependent associations with HuR were
specific for cyclin A, cyclin B1, and c-fos, since assessment of a
control radiolabeled RNA (encoding the cyclin E 3' UTR) in binding
assays revealed no differences associated with cell senescence and
similarly failed to produce supershifts (Fig. 5). Other control
transcripts (those encompassing the coding region and 5' UTRs of the
three genes) likewise failed to show this age-dependent difference in complex formation, and no supershifts were observed (not shown).

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FIG. 5.
HuR binding to target mRNAs in young and senescent
human fibroblasts. Radiolabeled RNAs encoding the 3' UTRs of c-fos,
cyclin A, cyclin B1, and cyclin E are shown (top; underlined).
Radiolabeled transcripts were incubated with proteins present in either
nuclear (Nuc.) or cytoplasmic lysates of young (Y) or
senescent (S) WI-38 or IDH4 cells (defined in the legend to Fig. 3),
forming associations with slower electrophoretic mobilities (bottom).
Complexes formed with lysates from IDH4 cells and radiolabeled
transcripts were assayed for the ability to be supershifted by either
anti-HuR antibodies ( -HuR), or control anti-p27,
anti-p38, or anti-p53 antibodies ( -p27,
-p38, and -p53, respectively), as
shown. f, free probes; arrows, supershifted complexes.
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These age-dependent binding activities were further characterized, as
shown in Fig.
6. Decreasing complex
formation was seen
in lysates from cells that were advancing towards
senescence (Fig.
6A). Binding specificity was assessed using competing
unlabeled
transcripts. Complex formation was inhibited when lysates
were
preincubated with 5-, 10-, or 20-fold excess specific, or
"self,"
unlabeled transcript (that is, unlabeled cyclin A
transcript in
the case of shifts using radiolabeled cyclin A, unlabeled
cyclin
B1 transcript for cyclin B1 shifts, and similarly for c-fos).
By
contrast, similar fold excess of a nonspecific transcript (cyclin
E 3'
UTR) failed to compete for binding (Fig.
6B).

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FIG. 6.
Time course of complex formation in cells undergoing
senescence, showing specificity of binding to target radiolabeled
transcripts. (A) Cytoplasmic lysates from IDH4 cells cultured without
dex ( Dex) for the indicated times were incubated with radiolabeled
cyclin A, cyclin B1, or c-fos transcripts. (B) IDH4 cytoplasmic lysates
were incubated with 5×, 10×, or 20× excess unlabeled competitor
transcripts. Lanes Sp, competition using a specific transcript
(unlabeled cyclin [cyc] A RNA competing for binding of radiolabeled
cyclin A RNA, unlabeled cyclin B1 RNA competing for binding of
radiolabeled cyclin B1 RNA, and likewise for c-fos RNA); lanes Non-Sp,
competition using unlabeled cyclin E RNA as a nonspecific transcript in
binding assays with radiolabeled cyclin A RNA, cyclin B1 RNA, and c-fos
RNA.
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Ectopic intervention to either elevate or reduce HuR expression can
alter the half-lives of target senescence-associated mRNAs.
Next, we sought to determine if the observed differences in HuR levels
in young and senescent cells directly influenced the levels of cyclin
A, cyclin B1, and c-fos. To this end, we chose to utilize IDH4 cells
grown without dex for 3 to 4 days, which rendered their phenotype
intermediate between those of young (with dex) and senescent (without
dex for 7 days) fibroblasts and allowed us to monitor HuR-dependent
changes leading to the acquisition of younger or more
"senescencelike" traits. Cells that had been transiently
transfected with an empty vector (zeo) or with vectors expressing
either HuR (S) or an antisense transcript complementary to HuR mRNA
(AS) (see Materials and Methods) were grown without dex for 3 to 4 days. Parallel transfections using an enhanced green fluorescent
protein expression vector revealed that 75 to 90% of the cells were
transfected under our experimental conditions (not shown). WI-38 cells
were not amenable to such transfection-driven changes in HuR expression
levels due to their very low transfection rates. As shown in Fig.
7, by day 3 such transient overexpression of HuR(S) in senescent IDH4 cells led to an
4-fold increase in HuR
levels, while HuR(AS) expression led to an
3.5-fold decrease in HuR
levels relative to transfections using an empty vector. Levels of the
constitutively expressed nuclear protein BAF57c served as a control for
loading, while levels of the RNA-binding AUF1 protein family were not
significantly altered. Accordingly, lysates prepared from each
transfection group formed complexes with transcripts encoding the 3'
UTRs of cyclin A, cyclin B1, and c-fos that were in keeping with HuR
levels: compared with control cells (zeo), binding was higher in
HuR-overexpressing cells and lower in cells with reduced HuR expression
(S and AS, respectively) (Fig. 7B).

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FIG. 7.
Influence of HuR levels on the formation of protein
complexes with the 3' UTRs of senescence-associated genes. (A) Western
blot analysis of expression of the indicated genes was carried out
using IDH4 cells transiently transfected with either empty vector
(zeo), HuR-expressing (S), or antisense-HuR-expressing (AS) plasmid
pZeoSV2( ) and then cultured in the absence of dex for 3 days. (B)
Binding of radiolabeled RNAs corresponding to the 3' UTRs of cyclin
(cyc) A, cyclin B1, and c-fos and proteins present in the cytoplasmic
lysates (10 µg) of IDH4 cells cultured as described for panel A. Fold
differences in intensity of shifted complexes, relative to those in zeo
populations, are shown below the lanes.
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These interventions to either elevate or reduce HuR expression levels
affected the steady-state levels and half-lives of target
mRNAs. As
shown in Fig.
8, the expression levels,
as well as the
half-lives, of mRNAs encoding cyclins A and B1 were
longer in
the HuR(S) transfection group and shorter in the HuR(AS)
transfection
group than they were in control, empty-vector-transfected
group
(as measured by day 3 without dex). For cyclin A mRNA,
half-lives
were 2.7 h for the zeo transfection group, 3.3 h
for the HuR(S)
group, and 2 h for HuR(AS); for cyclin B1 mRNA,
half-lives were
2.8 h for zeo control, 3.8 h for HuR(S), and
2 h for HuR(AS).
c-fos mRNA signals were too low to measure
accurately in actinomycin
D-based experiments. By contrast, HuR levels
did not influence
either the steady-state levels or the half-lives of
two control
mRNAs, those encoding gadd153 and

-actin (Fig.
8).

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FIG. 8.
Influence of HuR levels on the steady-state levels and
stabilities of senescence-associated genes. Three days after
transfection and removal of dex (as described in the legend to Fig. 7),
expression of cyclin A, cyclin B1, and c-fos was assessed in IDH4
cells. (A) Representative Northern blots depicting the steady-state
levels of cyclin (cyc) A, cyclin B1, c-fos, gadd153, and -actin
mRNAs, as well as 18S rRNA, and quantitations from 10 independent experiments (bar graph, showing means + standard errors of
the means [SEM]). (B) Cyclin A, cyclin B1, -actin, and
gadd153 mRNA stabilities, assessed as explained in the legend to
Fig. 2B; the values represent the means ± SEM of seven
independent experiments.
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Taken together, these observations suggest that high HuR levels, such
as are found in young cells, contribute to maintaining
high
expression of cyclin A, cyclin B1, and c-fos, all three important
proliferation-associated genes, while decreased HuR expression
in
senescent cells contributes to lowering their
expression.
Ectopic intervention to either elevate or reduce HuR expression in
IDH4 cells can alter their senescence phenotype.
Given HuR's
ability to regulate the mRNA levels of genes whose expression is
reduced with senescence, we postulated that HuR expression levels could
directly influence the implementation (onset and/or maintenance) of the
senescence phenotype. Consistent with this view, overexpression of HuR
in IDH4 cells grown without dex for 3 to 4 days revealed a younger
phenotype than did vector-transfected (zeo) cells, as the cells
exhibited higher cdk activity, proliferation, and
3H-thymidine incorporation (Fig.
9) while they displayed a lower proportion of SA-
-gal-positive cells (Fig.
10). By contrast, populations where HuR
expression was suppressed displayed more pronounced characteristics of
senescence, with lower basal cdk activity, fewer cells, less
3H-thymidine incorporation, and a dramatically
higher number of enlarged, SA-
-gal-positive cells (Fig. 9 and 10).

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|
FIG. 9.
Influence of HuR levels on the senescent phenotype. IDH4
cells transfected as described in the legend to Fig. 7 (zeo, S, and AS)
were cultured without dex for either 3 or 6 days and then subjected to
assessment and quantitation of cdk2- and cdc2-associated kinase
activity using histone H1 as a substrate (A), 3H-thymidine
(Thym.) incorporation (B), or total cell numbers (C). The graphs
represent the means ± standard errors of the means of four
independent experiments.
|
|

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[in this window]
[in a new window]
|
FIG. 10.
Influence of HuR levels on SA- -gal activity. IDH4
cells transfected as described in the legend to Fig. 7 (zeo, S, and AS)
were cultured without dex for 4 days and then stained to assess
SA- -gal activity. Top, representative fields; bottom, quantitation
of SA- -gal-positive IDH4 cells. The graph represents the means + standard errors of the means of four independent experiments.
|
|
 |
DISCUSSION |
The data presented here provide novel insight into the regulation
of gene expression during replicative senescence. Using two established
models of cellular senescence, we show that expression of the
RNA-binding protein HuR, as well as binding of HuR to target mRNAs
encoding cyclin A, cyclin B1, and c-fos, decreases with replicative
senescence (Fig. 3 and 5). Both the half-lives and expression levels of
these mRNAs are elevated in young cells, where HuR is abundant, but
are low in senescent cells, where HuR expression is diminished. We
further show that transfected IDH4 cells overexpressing HuR displayed
elevated stability of target mRNAs, while those expressing lower
HuR levels showed reduced target mRNA half-lives. Importantly, such
manipulations of HuR expression affected the senescence phenotype of
IDH4 cells. As shown in Fig. 9 and 10, cells overexpressing HuR
displayed features of young cells (lower SA-
-gal activity and higher
cdk activity and 3H-thymidine incorporation)
compared with empty-vector-transfected cells, while cells expressing
reduced HuR levels displayed an enhanced senescent phenotype (higher
SA-
-gal activity and diminished cdk activity, proliferation, and
3H-thymidine incorporation).
To date, the expression of replicative-senescence-associated genes has
been studied by comparing collections of genes expressed in various
young and senescent cell systems, but the underlying mechanisms serving
to coordinately regulate their expression (for example, transcriptional
regulators) have remained elusive. Based on our results reported here,
we propose that changes in mRNA stability may constitute an
effective means of globally regulating age-related gene expression.
Coordinate, HuR-dependent changes in the expression of cyclin A, cyclin
B1, and c-fos (whose mRNAs are known targets of HuR [25, 35]) may
have a direct impact on the senescence phenotype, since these genes are
critical regulators of cellular proliferation and cell cycle
progression. However, it is likely that additional HuR target genes
collectively participate in the implementation of the senescence
phenotype, its maintenance, or both. In this regard, HuR was found to
bind transcripts corresponding to other senescence-related genes, such
as those for MnSOD and DP-1 (not shown).
Based on earlier observations that (i) elevated p21 is a hallmark of
entry into senescence, (ii) HuR stabilized the p21 mRNA after
exposure to UV irradiation (34), and (iii) to our
knowledge, no senescence-associated activators of p21 transcription
have been reported, we initially set out to examine if HuR enhanced p21
mRNA in our study system. Surprisingly, HuR does not appear to be
responsible for upregulating p21 expression during replicative senescence (as it does during the cellular stress response) based on
our data presented here (Fig. 2). Systematic studies aimed at examining
HuR-regulated changes in gene expression are under way in our
laboratory using DNA arrays. We anticipate finding additional
senescence-associated genes using this strategy.
According to the model emerging from the present study, high HuR
expression in young cells has a direct impact on the cellular phenotype, characterized by a highly proliferative state (in which cyclin A, cyclin B1, and c-fos are known to be major participants). Likewise, low HuR expression in senescent cells contributes to maintaining reduced levels of such proliferative genes. A corollary of
our hypothesis is that cells expressing high levels of HuR are likely
to have high proliferation rates. In this regard, it is of interest to
note that HuR was more highly expressed in skin fibroblasts from young
individual donors (Fig. 4) and that high HuR expression levels were
found in neoplastic tissues and were correlated with rapid growth, both
in vivo and in vitro (1). Likewise, HuR was found to be
highly expressed in virtually all tumors examined (H. Furneaux,
personal communication). In conclusion, while HuR expression could be a
consequence of replicative senescence, the ability of HuR manipulations
to alter the senescent phenotype suggests a direct participation of HuR
in the process of in vitro senescence.
Although the link between in vitro cellular senescence and human aging
remains controversial, a diminution in proliferative capacity is also a
hallmark of in vivo aging. Therefore, knowledge of the mechanisms
serving to regulate gene expression during in vitro senescence is
likely to aid our understanding of in vivo aging as well as contribute
to our comprehension of age-related diseases, such as cancer and
hyperplasia, where control of proliferation is lost. As in cancer,
where clearly more genes are abnormally expressed than are mutated
(29), it is plausible that conditions associated with
aging also arise as a consequence of deregulated gene expression rather
than mutations. Thus, while single-gene approaches to intervene in such
conditions have been unfruitful, it is likely that strategies aimed at
modulating global patterns of gene expression will prove more successful.
 |
ACKNOWLEDGMENTS |
We are grateful to Jerry W. Shay for providing the IDH4 cells,
Weidong Wang for the anti-BAF57c antibody, Henry Furneaux for the
anti-HuR antibody, and Gary Brewer for the anti-AUF1 antibody. We thank
Theresa Marinucci for providing WI-38 cells and Mingyi Wang for
photographic assistance.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Box 12, Laboratory of Cellular and Molecular Biology, GRC, National Institute
on Aging-IRP, NIH, 5600 Nathan Shock Dr., Baltimore, MD 21224. Phone:
(410) 558-8443. Fax: (410) 558-8386. E-mail:
myriam-gorospe{at}nih.gov.
 |
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0270-7306/01/$04.00+0 DOI: 10.1128/MCB.21.17.5889-5898.2001
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