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Molecular and Cellular Biology, January 2001, p. 390-399, Vol. 21, No. 2
0270-7306/01/$04.00+0 DOI: 10.1128/MCB.21.2.390-399.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Copper-Modulated Gene Expression and Senescence in
the Filamentous Fungus Podospora anserina
Corina
Borghouts,
Alexandra
Werner,
Thomas
Elthon,
and
Heinz D.
Osiewacz*
Botanisches Institut, Johann Wolfgang
Goethe-Universität, D-60439 Frankfurt am Main, Germany
Received 28 August 2000/Accepted 9 October 2000
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ABSTRACT |
We have previously shown that the control of cellular copper
homeostasis by the copper-modulated transcription factor GRISEA has an
important impact on the phenotype and lifespan of Podospora anserina. Here we demonstrate that copper depletion leads to the induction of an alternative respiratory pathway and to an increase in
lifespan. This response compensates mitochondrial dysfunctions via the
expression of PaAox, a nuclear gene coding for an
alternative oxidase. It resembles the retrograde response in
Saccharomyces cerevisiae. In P. anserina, this
pathway appears to be induced by specific impairments of the
copper-dependent cytochrome c oxidase. It is not induced as
the result of a general decline of mitochondrial functions during
senescence. We cloned and characterized PaAox. Transcript
levels are decreased when cellular copper, superoxide, and hydrogen
peroxide levels are raised. Copper also controls transcript levels of
PaSod2, the gene encoding the mitochondrial manganese
superoxide dismutase (PaSOD2). PaSod2 is a target of transcription factor GRISEA. During the senescence of wild-type strain
s, the activity of PaSOD2 decreases, whereas the activity of the
cytoplasmic copper/zinc superoxide dismutase (PaSOD1) increases. Collectively, the data explain the postponed senescence of mutant grisea as a defined consequence of copper depletion, ultimately leading
to a reduction of oxidative stress. Moreover, they suggest that during
senescence of the wild-type strain, copper is released from
mitochondria. The involved mechanism is unknown. However, it is
striking that the permeability of mitochondrial membranes in animal
systems changes during apoptosis and that mitochondrial proteins with
an important impact on this type of cellular death are released.
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INTRODUCTION |
In biological systems, copper as a
cofactor of different enzymes (e.g., cytochrome c oxidase
[COX] and Cu/Zn superoxide dismutase [SOD1]) is an essential trace
element. Apart from this essential role, elevated copper levels are
cytotoxic. This effect is thought to be due to the copper-mediated
generation of the highly toxic hydroxyl radical able to efficiently
damage all biomolecules. The dual role of copper makes it crucial for
biological systems to control cellular copper levels tightly. To date,
the regulation of cellular copper homeostasis is best understood in
Saccharomyces cerevisiae (for recent reviews, see references
25, 31, 59, and 60). In this
yeast, control occurs at the transcriptional level via the two
copper-sensing and copper-modulated transcription factors MAC1 and
ACE1. MAC1 is active under low-copper conditions and induces the
expression of four genes involved in high-affinity copper uptake. These
are the genes encoding two high-affinity copper ion permeases, CTR1 and
CTR3, and the metalloreductase FRE1 (10, 18, 26). The
function of FRE7, the product of the fourth target gene of MAC1, is
still unknown (34). Elevated cellular copper levels lead
to a repression of MAC1. As a consequence, the expression of the
mentioned target genes is reduced. In contrast to MAC1, ACE1 is active
when cellular copper levels are high. Under these conditions, ACE1
induces the expression of genes encoding the copper-binding proteins
CUP1 and CRS5, two yeast metallothioneins, and the cytoplasmic SOD1.
These proteins act against the toxic effect of copper by binding this metal.
Several of the different components of the complex molecular system
involved in the control of cellular copper homeostasis in S. cerevisiae have been identified in other organisms, including different yeasts, the filamentous fungus Podospora anserina,
and plants and humans, thus stressing the importance of strict
regulation of cellular copper levels (3, 8, 19, 22, 28,
62).
In P. anserina, GRISEA was identified as an ortholog of MAC1
(8, 41). A mutation in the Grisea gene leads to
a different phenotype and a 60% increase in life span, further
emphasizing the significance of copper homeostasis. Due to a specific
mutation leading to a splice defect, Grisea is not
expressed, resulting in a copper uptake defect. In mitochondria of the
corresponding mutant, the reduction of copper levels was found to
increase the stability of the mitochondrial DNA (mtDNA), a process
significantly contributing to life span extension (7).
mtDNA stabilization appears to be due to a reduced homologous
recombination activity in mitochondria, indicating a copper dependence
of the underlying mechanism (6).
In most obligate aerobes, energy transduction is strictly dependent on
the availability of cellular copper since the COX complex, the terminal
oxidase of the cyanide-sensitive respiratory chain, requires copper as
a cofactor. However, higher plants, some protozoans, and some fungi can
induce an alternative respiratory pathway. This pathway branches at the
ubiquinone pool of the respiratory chain and is dependent on the
expression of a gene coding for alternative terminal oxidase (AOX)
(reviewed in references 14, 54 and
55). Instead of copper, the AOX utilizes iron as a cofactor (4, 53). The AOX is cyanide resistant but
sensitive to salicylhydroxamic acid (SHAM).
In this study, we report data of investigations conducted to further
elucidate the significance of cellular copper for senescence and
lifespan control. In particular, we focused on the energy transduction
pathways in mitochondria. We cloned and characterized a gene coding for
the AOX of P. anserina and investigated the expression of
this gene in the wild-type strain and in two mutants with an affected
COX. In addition, we investigated the role of copper in the expression
and activity of components of the defense system against oxidative
stress and found that the cellular distribution of copper appears to
change during senescence.
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MATERIALS AND METHODS |
Strains and media.
The wild-type strain s and the two mutant
strains grisea and ex1 of P. anserina were used in this
study (15, 43, 50). Cultures were grown on cornmeal agar
at 27°C under light. In some of the experiments described below,
cultures were subsequently grown in liquid complete medium (CM) for 2 to 3 days (6). To determine life span, cultures were grown
in race tubes and examined until they stopped growing. Several
supplements like bathocuproinedisulfonic acid (BCS; Sigma), paraquat,
and H2O2, as well as different metals, were
added to the autoclaved medium at a temperature of about 60°C. Metals
and BCS were added after sterile filtration. To reduce Cu(II) to Cu(I),
ascorbic acid was added in combination with the Cu(I) chelator BCS.
Concentrations are indicated in the figure legends. Before preparation
of RNA, different concentrations of paraquat (100, 250, and 500 µM)
were added to the CM and cultures were incubated in this supplemented
medium for different times (15 min, 30 min, 1 h, and 4 h).
Accordingly, 0.01, 0.02, and 0.04% H2O2 was
added 15 min, 30 min, 1 h, 4 h, 16 h, and 4 to 6 days before RNA isolation. These cultures were incubated at 27°C in the dark.
Isolation of mitochondria.
All isolation steps were
performed at 4°C. Wet mycelium (30 to 40 g) was suspended in 200 ml of grinding buffer (350 mM mannitol, 30 mM morpholinepropanesulfonic
acid [MOPS], 1 mM EDTA, and 0.2% bovine serum albumin [pH 7.6]).
Immediately, 1.2 g of polyvinylpyrrolidone and 0.253 g of
L-cysteine were added. Cell walls were broken in a Waring
blender for 1 min. The cell debris was filtered through cheesecloth,
and the filtrate was centrifuged at 6,500 rpm (SS34 rotor; Sorvall) for
2 min. Subsequently, the supernatant was centrifuged once again at
12,750 rpm for 5 min. The pellet was resuspended in 12 ml of wash
medium (300 mM mannitol, 20 mM MOPS, 1 mM EDTA, and 0.2% bovine serum
albumin [pH 7.2]) and homogenized using a glass homogenizer. Wash
medium (28 ml) was added, and the solution was centrifuged at 6,500 rpm
for 2 min. Twenty milliliters of the supernatant was layered onto 8 ml
of 0.6 M sucrose in a centrifuge tube, and mitochondria were pelleted
at 9,250 rpm for 20 min. Pellets were resuspended in 100 ml of
suspension solution (250 mM sucrose, 30 mM MOPS [pH 7.2]).
Mitochondria were subsequently used for COX activity measurements or
for Western blot analysis.
Determination of COX activity.
Mitochondria were diluted at
a concentration of 30 µg/ml in assay buffer (30 mM MOPS, 20 mM KCl, 1 mM EDTA [pH 7.2]). To break the mitochondrial membranes, samples were
sonicated three times (30% duty cycle) at 1-min intervals on ice using
a Branson sonifier. Horse heart cytochrome c (Sigma), used
as a substrate, was reduced by sodium dithionite and eluted by gel
filtration on a Sephadex G-25 column. Measurements were performed in a
spectrophotometer (Uvikon) at 550 nm in a 1-ml cuvette containing 10 µl of 20 µM reduced cytochrome c in 890 µl of assay
buffer and 100 µl of mitochondria (containing about 3 µg of
protein). As a control, the reaction was inhibited after 2 min by the
addition of 10 µl of 350 mM KCN. COX activity was calculated in units
per milligram by using an
of 19.4 mM
1
cm
1.
Western blot analysis.
Mitochondria (5 to 15 µg of
protein) were boiled for 2 min in loading buffer (0.1 Tris [pH 6.8],
6% sodium dodecyl sulfate (SDS), 6% glycerol, 0.6 M
-mercaptoethanol) and were separated on a 16% denaturing
polyacrylamide gel using a Protean II electrophoresis unit (Bio-Rad).
Subsequently, proteins were transferred to a nitrocellulose membrane by
using an electroblotting device (Bio-Rad). Standard protocols were
followed. Immunoblots were probed with an anti-AOX mouse monoclonal
antibody (called AOA) that was generated against the AOX of
Sauromatum guttatum (13). Additionally, blots
were reprobed with anti-
ATPase rabbit monoclonal antibodies
(37) to confirm equal loading of mitochondrial proteins.
Detection was performed by using the Western Light kit (Tropix)
according to the protocol of the supplier.
Oxygen uptake measurements.
Mitochondrial respiration was
measured with a Clark-type electrode (Rank Bros.) in oxygen uptake
buffer containing 0.1 M potassium phosphate buffer (pH 6.0), 0.1%
glucose, and 2 mM succinate. About 200 mg of wet mycelial pellets was
washed in oxygen uptake buffer and transferred into the reaction
vessel. The COX-dependent and alternative pathways were inhibited by
the addition of 1 mM KCN and 4 mM SHAM, respectively. To calculate the
amount of oxygen uptake, the dry weight of the mycelium used in each
measurement was determined afterwards.
Cloning of PaAox and PaSod2.
Partially
degenerated primers (AOX1, 5'-RCGMGAYAAYGGMTGGAT-3'; AOX2,
5'-TCCTCCTCRAGGTAMCCGAC-3') were deduced from a conserved part of the Aox genes from Neurospora crassa,
Aspergillus niger, and Magnaporthe grisea. These
primers were used to amplify cDNA from the wild-type strain of P. anserina. The PCR was performed at an annealing temperature of
50°C. A single product of about 200 bp was obtained. This fragment
was cloned and sequenced and used as a probe to screen a genomic DNA
library and a cDNA library of the wild-type strain. The cDNA library
was constructed starting from RNA of P. anserina cultures
grown in medium that was depleted of copper by the addition of 33 µM
BCS and 1 mM ascorbic acid. In the corresponding cDNA library, the
probability to select for PaAox, the expression of which is
induced under copper-depleted conditions, should be increased. This
screen revealed a 1.4-kb cDNA clone and a 8.5-kb EcoRI
genomic fragment. Sequence analysis confirmed that both clones
contained the PaAox gene. Sequence alignments were performed
using the BLASTN program (2).
A conserved part of the manganese superoxide gene (PaSod2)
was cloned by PCR amplification using the two partly degenerated primers MnSOD1 (5'-AAGCACCAYCARACYCTAYGSA-3') and MnSOD2
(5'-GTAGTASGCRTGYTCCCACAT-3') deduced from the MnSOD genes
of N. crassa, S. cerevisiae, and Penicillium chrysogenum. Amplification was performed using
the cDNA of wild-type strain s at an annealing temperature of 48°C. The product of about 400 bp was cloned in the SmaI site of
pUC18 and sequenced. The sequence showed 74% identity to the
Sod-2 gene of N. crassa. This cloned fragment was
used as a probe for Northern blot analysis and to screen a cDNA
library. The Gpd gene of P. anserina (accession
no. X62824) was amplified by using primers Gpd1
(5'-CAAACATGACTGTCAAGG-3') and Gpd2
(5'-GGAACCTACGAATCAACTAG-3') and served as an internal control.
Northern blot analysis.
Cultures were grown for 2 to 3 days
on agar plates and 2 to 3 days in CM. Approximately 10 g of
mycelium was harvested and ground in liquid nitrogen. The frozen
mycelial powder was transferred to 30 ml of prewarmed (60°C) GTC
buffer (5.5 M guanidine thiocyanate, 25 mM sodium citrate, 0.5%
N-lauroylsarcosine, 0.2 M
-mercaptoethanol [pH 7.0]),
mixed, and incubated for 10 min at 60°C. The sample was centrifuged
(10 min, 10,000 rpm, room temperature, Sorvall SS34 rotor), and the
supernatant was layered onto 3 ml of CsCl2 (5.7 M
CsCl2, 0.1 M EDTA [pH 7.4], refraction index of 1.400) in
an ultracentrifuge tube. RNA was centrifuged at 34,000 rpm (18 h,
Sorvall TH-641 rotor) at 20°C overnight. The pellet was washed with
70% ethanol and dissolved in dimethyl pyrocarbonate (DMPC)-treated
H2O. For Northern blot analysis, 10 to 20 µg of RNA was
separated on a standard formaldehyde agarose gel and subsequently blotted onto a nylon membrane using a vacuum blotting device (Amersham Pharmacia Biotech). Hybridizations were performed in 6× SSC (1× SSC
is 0.15 M NaCl plus 15 mM sodium citrate [pH 7.0]), 5× Denhardt's solution, 0.5% SDS, 50% formaldehyde, and 100-µg/ml denatured salmon sperm DNA. A radioactive probe was added at a concentration of
10 to 100 ng/ml. Hybridization was performed at 37°C overnight. Blots
were washed at 37°C in 2× SSC-0.5% SDS twice for 10 min and
subsequently at 50°C in 0.1× SSC-0.1% SDS twice for 15 min. Blots
were exposed to X-ray films for 24 h to 7 days.
SOD activity assay.
Total proteins were isolated by grinding
5 g of wet mycelium in liquid nitrogen. The mycelial powder was
dissolved in 20 ml of extraction buffer (1 mM EDTA, 20 mM HEPES [pH
7.5]) and was incubated on ice for 30 min. The sample was centrifuged
(13,000 rpm, 10 min, Sorvall GSA rotor), and the supernatant was
stirred for 30 min. During this time, ammonium sulfate salt was slowly added until a final concentration of 0.66 g per ml of supernatant was reached. The sample was stirred for an additional hour at 4°C and
centrifuged (8,500 rpm, 50 min, Sorvall GSA rotor), and the protein
pellet was resuspended in 0.5 to 1 ml of extraction buffer. The
concentration of the protein sample was determined according to a
modified protocol as described by Bradford using Roti-nanoquant (Roth).
To detect SOD activity, proteins (50 to 75 µg) were separated on a
8.5% nondenaturing polyacrylamide gel and stained using nitroblue
tetrazolium, riboflavin, and
N,N,N',N'-tetramethylethylenediamine as described previously (16).
Nucleotide sequence accession numbers.
The sequences of
PaAox and PaSod2 have been submitted to GenBank
and the EMBL Data Bank. The accession numbers are AJ290969 and
AJ278985.
 |
RESULTS |
Life span of P. anserina is modulated by cellular
copper levels.
In previous work, the nuclear gene
Grisea from P. anserina has been cloned and
characterized (6-8, 41). A loss-of-function mutation in
this gene has a pleiotropic effect on cultures: the pigmentation of the
mycelium and of the ascospores is changed, the formation of female
gametangia is affected, and life span is increased (43).
In the corresponding mutant grisea, a high-affinity copper transporter
gene is not expressed (unpublished data), consequently leading to
decreased cellular copper levels. The phenotype of the mutant can be
rescued to wild-type characteristics by growing cultures in medium
containing high amounts of copper, most likely due to the uptake of
copper via a low-affinity system (7, 33). These data
clearly indicate an important effect of copper on the lifespan of
P. anserina. In order to verify and further support this
conclusion, we grew the wild-type strain on solid medium depleted of
copper by the addition of different amounts of the copper chelator BCS.
These conditions lower cellular copper levels. Since copper excess
represses the activity of GRISEA, copper depletion results in a strong
activation of this transcription factor (8). As may be
seen from Fig. 1, the addition of BCS to
the medium resulted in a clear extension of life span. Growth in a
medium containing 30 µM BCS led to mean and maximum life spans that
are greater than even the corresponding life span of mutant grisea. These results demonstrate that life span extension in long-lived mutant
grisea is due to the defect in the control of the high-affinity copper
uptake system and not due to the compromised regulation of unidentified
target genes of GRISEA.

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FIG. 1.
Copper depletion leads to an extension of life span.
Fifteen P. anserina cultures of the wild-type strain derived
from independent mononucleate ascospores were grown to senescence on
cornmeal agar containing 10 µM BCS and 0.33 mM ascorbic acid or
containing 30 µM BCS and 1 mM ascorbic acid or without supplements.
Accordingly, 15 cultures of mutant grisea were grown on cornmeal agar.
All cultures were grown in race tubes at 27°C in the light. A single
culture of mutant ex1 has been growing in the laboratory on cornmeal
agar plates for over 12 years without signs of senescence.
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An alternative respiratory pathway is induced in long-lived mutant
grisea.
It was previously demonstrated that the long-lived mutant
strain ex1 does not respire via the cyanide-sensitive, COX-dependent respiratory chain but via a cyanide-resistant, SHAM-sensitive pathway
(17, 51). This switch results from the deletion of parts
of the CoxI gene coding for the first subunit of the COX complex and seems to lead to eternal life (Fig. 1). Since copper is a
cofactor of COX and cellular copper levels are reduced in mutant
grisea, we analyzed the function of the mitochondrial respiratory chain
in this mutant. First, we determined the activity of COX in
mitochondria from middle-aged cultures of the wild-type strain and of
mutant grisea. In mutant mitochondria, the COX activity was found to be
reduced approximately fivefold in comparison to that from the wild-type
strain (Fig. 2A). The subsequent analysis of oxygen uptake as a measure of mitochondrial respiration revealed that in mutant grisea, respiration is largely resistant to cyanide but
sensitive to SHAM. This is similar to the situation in mutant ex1 but
in sharp contrast to that in the wild-type strain (Fig. 2B). Growth of
mutant grisea on medium supplemented with 100 µM CuSO4
led to a reversion of SHAM sensitivity to the characteristic cyanide
sensitivity of the wild type. Vice versa, the wild-type strain grown in
a medium depleted of copper by the addition of BCS becomes sensitive to
SHAM and more resistant to KCN (Fig. 2C). Clearly, it appears that
mitochondria of P. anserina affected at complex IV of the
respiratory chain lead to an induction of the alternative respiratory
pathway.

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FIG. 2.
Copper depletion leads to reduced activity of COX and to
the induction of the alternative oxidase. (A) Photometric determination
of COX activity in the wild-type strain and mutant grisea. Three
micrograms of mitochondrial protein was incubated with reduced
cytochrome c as described in Materials and Methods. The
protein preparation and measurements were repeated three times. (B)
Oxygen uptake measurements of the wild-type strain, mutant grisea, and
mutant ex1, without addition of respiratory inhibitors, with addition
of 1 mM KCN, or with addition of 4 mM SHAM. (C) Oxygen uptake
measurements of the wild-type strain grown on 30 µM BCS and 1 mM
ascorbic acid and of mutant grisea grown on 100 µM CuSO4.
Experiments described for panels B and C were carried out at least in
triplicate with two or three independent isolates of each strain.
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Cloning and transcriptional analysis of PaAox.
Since the
alternative respiratory pathway is induced by cellular copper depletion
and since the induction of this pathway appears to have a significant
impact on longevity (12, 17, 51), we set out to clone and
characterize the gene coding for the AOX of P. anserina. The
gene, named PaAox, was cloned following a PCR cloning
strategy. Degenerated primers were synthesized to conserved parts of
the Aox gene from different organisms (see Materials and
Methods). These primers were used to amplify the conserved part of
PaAox from a cDNA library of P. anserina. The resulting amplification product containing a part of PaAox
was used to isolate the full-length cDNA and the complete gene from a
genomic library. The sequence of the corresponding insert fragments was
found to contain an open reading frame encoding a peptide with a high
degree of sequence identity to other AOX sequences, in particular to
those of fungal and plant origin (Fig.
3). The open reading frame of the genomic
fragment is interrupted by two introns of 72 and 64 bp. These introns
are located in the first half of the gene (Fig. 3). In PaAOX the six
amino acids proposed to be involved in iron binding (4,
53) and the glutamine essential for the catalytic activity of
the alternative oxidase of S. guttatum (1) were
found at the correct position. Hybridization of total DNA with the
PaAox probe revealed that the gene is present as a
single-copy genome of P. anserina (data not shown).

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FIG. 3.
Multiple protein alignment of the deduced amino acid
sequences of P. anserina PaAOX with N. crassa
AOD-1 (29), M. grisea MgAOX (61),
Hansenula anomala (49), Arabidopsis
thaliana AOX1B (48), and S. guttatum AOX1
(46). The area with black background corresponds to
residues completely conserved between all species, while the area with
gray background displays homology of PaAOX with the AOX sequence of
several but not all examples (indicated in percent at the end of the
sequence). The amino acids indicated by arrows were proposed to form
the binuclear iron center on the matrix side of the mitochondrial inner
membrane, whereas Glu270 (*) was found to be essential
for the catalytic activity of the alternative oxidase from S. guttatum (1, 4, 53). These amino acids are also
conserved in PaAOX. The positions of two introns in the nucleotide
sequence of PaAox are indicated by black triangles.
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After cloning
PaAox, we analyzed the expression of this gene
at the transcriptional level. Transcript levels are higher in
the
copper-deficient mutant grisea than in the wild-type strain
(Fig.
4A). The expression is clearly modulated
by cellular copper.
Supplementation of the growth medium with
CuSO
4 led to decreased
transcript levels, whereas copper
depletion resulted in an increase
(Fig.
4B). Basically, the same
response was observed in mutant
grisea (Fig.
4C). These data indicate a
copper-dependent expression
of
PaAox modulated at the
transcriptional level. Since the copper-dependent
regulation of
PaAox is effective in mutant grisea lacking the
functional
copper-regulated transcription factor GRISEA, regulators
other than
GRISEA must be responsible for the observed regulation
of this gene.

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FIG. 4.
Transcription of the PaAox gene is dependent
on the cellular copper concentration. (A) Transcript level of
PaAox for the wild-type strain (s) compared to that for
mutant grisea (gr). (B and C) Northern blot analysis of
PaAox in wild-type strain s (B) and mutant grisea (C) at low
or high copper concentrations in the medium. The copper concentration
was reduced by the addition of 10 µM BCS and 0.33 mM ascorbic acid or
30 µM BCS and 1 mM ascorbic acid or 50 µM BCS and 1.7 mM ascorbic
acid. Copper levels were increased by the addition of 0.1, 1.0, or 10 µM CuSO4 to the medium. In the lower part of the figure,
the ethidium bromide-stained RNA is shown as loading control.
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The alternative pathway is not induced during aging of P. anserina cultures.
As mentioned above, dysfunctional
mitochondria affected at the COX complex of the respiratory chain of
P. anserina lead to the induction of PaAox.
Dysfunctional mitochondria are not restricted to particular mutants of
P. anserina but regularly arise during aging of these
cultures. Functional impairment, at least in part, is the consequence
of extensive rearrangements of the mtDNA. These rearrangements result
in deletions of large regions of DNA encoding different proteins of the
respiratory chain (9, 27). It thus was reasonable to
surmise that a switch from the COX-dependent to AOX-dependent
respiration may occur regularly during aging of wild-type cultures. We
investigated this possibility by the analysis of oxygen uptake in
cultures of different ages. Clearly, the general performance of
mitochondria was found to decline during aging. However, the response
to the specific inhibitors of the two terminal oxidases did not change
significantly (Fig. 5A). These results
were confirmed by Western blot analysis using a monoclonal antibody
against the AOX of S. guttatum (13). In both
long-lived mutants, a single band of about 39 kDa reacted with the
plant antibody. Interestingly, PaAOX levels were highest in the
immortal mutant strain ex1 (Fig. 5B). In mutant grisea, the amount of
the transcript and of the protein did not change during aging (Fig. 5B
and C). In the wild-type strain PaAox, transcripts were
detected and were found to decline during aging. The protein was only
detectable in very low amounts. At the protein level, the difference
between the wild-type strain and mutant grisea appears to be more
pronounced than at the transcript level, suggesting differences in the
posttranscriptional regulation of PaAox in the two analyzed
strains. Taken together, the data from the Western blot analysis and
those from the transcript analysis of the wild-type strain were
consistent with the data from respiration measurements showing that an
induction of the alternative respiratory pathway does not occur during
senescence.

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FIG. 5.
PaAOX-dependent respiration is not induced in senescent
cultures of the wild-type strain. (A) Oxygen uptake measurements of
juvenile (10 days), middle-aged (15 days), and senescent cultures of
the wild-type strain. Respiration was measured without addition of
respiratory inhibitors, after the addition of 1 mM KCN, or after the
addition of 4 mM SHAM. (B) Western blot analysis of PaAOX proteins of
juvenile (juv.), middle-aged (m.a.), and senescent (sen.) cultures of
the wild-type strain and of mutant grisea. In addition, mitochondrial
protein preparations of mutant ex1 were analyzed. PaAOX was detected
with AOA monoclonal antibodies directed against the AOX of S. guttatum strain Schott and visualized by enhanced
chemiluminescence. An antibody directed against the subunit of the
ATPase complex was used as a loading control. (C) Northern blot
analysis of PaAox transcription in juvenile and senescent
cultures of the wild-type strain and of mutant grisea. The ethidium
bromide-stained RNA is shown as a loading control.
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Oxidative stress reduces PaAox transcript levels.
In higher plants, the activity of the AOX was demonstrated to increase
by reactive oxygen species (ROS) (36, 57). In the fungus
M. grisea, transcription of the MgAox gene was
found to increase after addition of H2O2
(61). To test whether this is also the case in P. anserina, we incubated cultures of wild-type strain s and of
mutant grisea for different times in medium containing either
H2O2 or paraquat. The latter compound was added
as a superoxide generator. Northern blot analysis revealed that a
long-term induction of PaAox expression is not observed
under these conditions (Fig. 6). The
reduction in transcript levels can be observed after a few minutes of
incubation in paraquat-containing medium. The effect remains stable for
at least 4 h. The addition of higher levels of paraquat (250 and
500 µM) reduced PaAox transcript levels even more (not
shown). Growing cultures in H2O2 also led to an
overall decrease in transcript levels, although after an hour of
incubation, transcript levels recovered to the initial level. Later,
levels decreased again. The addition of higher levels of
H2O2 (0.02 and 0.04%) also reduced transcript
levels. The same results were obtained in the wild type and in mutant
grisea. In both strains, it appears that either the transcription of
PaAox is repressed or the stability of the transcript is
affected by the two tested additives. Thus, increased PaAox
transcript levels were not detected in P. anserina under
oxidative stress conditions as in M. grisea
(61).

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FIG. 6.
Transcription of PaAox is reduced by the
addition of paraquat and hydrogen peroxide. (A and B) Northern blot
analysis of PaAox transcripts in the wild-type strain and in mutant
grisea. Paraquat (Pq, 100 µM) was added to the medium 15, 30, 60, and
240 min before RNA preparation. (C and D) H2O2
(0.01%) was added to the medium 15, 30, 60, 240, and 960 min before
RNA preparation. These cultures were grown in the dark.
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Expression of SODs in P. anserina.
The extension of life
span in mutants grisea and ex1 correlates with the expression of
PaAox. Since it is known from plants and from P. anserina that the alternative pathway results in reduced formation
of ROS (12, 35, 44, 58), we surmised that in mitochondria
of long-lived mutant grisea, oxidative stress is reduced. In order to
verify this idea, mitochondrial ROS production was determined
indirectly by investigating the activity of the manganese SOD
(PaSOD2), a mitochondrial scavenger of superoxide. In the
wild-type strain, one SOD band was detected on nondenaturing polyacrylamide gels. The intensity of this band increased after addition of large amounts of manganese to the growth medium (Fig. 7A). Since it is known from other systems
(23) that manganese is involved in the expression of
Sod2, we surmised that the corresponding protein band
represents PaSOD2. Interestingly, the corresponding band does
not appear in mutant grisea, regardless of the conditions under which
this strain was cultivated. In addition to this manganese-inducible SOD, another SOD band migrating much more slowly was identified in both
wild-type and mutant grisea when strains were cultivated in medium
supplemented with 100 µM CuSO4. Since the activity of SOD1 (Cu/Zn SOD) is dependent on the availability of copper, we surmised that this band represents PaSOD1. Interestingly, the activity
of PaSOD2 is reduced in cultures of the wild-type strain grown in
medium containing 100 µM CuSO4.

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|
FIG. 7.
PaSOD2 is active in the wild-type strain and is
dependent upon cellular copper. (A) SOD activity assay. Proteins were
prepared from the wild-type strain and from mutant grisea after
cultivation of these strains in CM without supplements ( ) or in CM
containing 100 µM MnCl2 (Mn2+) or 100 µM
CuSO4 (Cu2+), run on a native polyacrylamide
gel, and stained for SOD activity. (B) Northern blot analysis of
PaSod2 transcription. Different metals (100 µM
CuSO4 [Cu2+], 100 µM AgCl
[Ag+], 100 µM MnCl2 [Mn2+],
100 µM FeSO4 [Fe2+], 100 µM
FeCl3 [Fe3+]) were added to the medium. ,
control. (C) Northern blot analysis of PaSod2 transcription
at different copper concentrations. To reduce the copper concentration,
cultures were grown in medium containing 1 µM BCS and 33 µM
ascorbic acid or 10 µM BCS and 0.33 mM ascorbic acid or 50 µM BCS
and 1.7 mM ascorbic acid. Copper levels were increased by the addition
of 0.1 or 10 µM CuSO4 to the medium. , no addition of
CuSO4 (control).
|
|
To verify the nature of the different SODs identified in native protein
gels more specifically, we cloned a part of
PaSod2 and used
this sequence as a probe for Northern analysis. Cloning
was achieved
following a PCR strategy. First, we amplified a specific
cDNA of the
corresponding
PaSod2 gene using partly degenerated
primers.
Subcloning and sequencing confirmed that a conserved
part of the gene
was amplified. The amino acid sequence derived
from the cloned cDNA
shares high homology with other fungal SOD2
proteins (e.g.,
N. crassa). Subsequently, we isolated a cDNA clone
from a
P. anserina cDNA library and determined the nucleotide
sequence. The
sequence verified that
PaSod2 was isolated. Northern
blot
analysis in which RNA of wild-type cultures cultivated in
standard
medium demonstrated expression of the gene in standard
medium. In
accordance with the predictions from the SOD activity
analysis,
supplementation of the medium with Mn
2+ leads to increased
transcript levels. The addition of Ag
+ and Fe
2+
ions had no significant effect on transcription, whereas
Cu
2+ and Fe
3+ led to decreased transcript
levels (Fig.
7B). The effect of copper
was more thoroughly investigated
by analyzing RNA isolated from
cultures grown in medium containing
different amounts of copper
and BCS (Fig.
7C). These experiments
clearly demonstrated that
PaSod2 transcript levels are
highest under copper-depleted
conditions.
PaSod2 is not expressed in long-lived mutant
grisea.
The transcript analysis data indicate that the SOD
activity of the faster-migrating protein in the activity gels that
appears to be induced by manganese corresponds to PaSOD2.
Interestingly, although PaSod2 transcription was found to be
increased by the addition of manganese or under copper-deficient
conditions, the activity of this protein was not detected in the copper
uptake mutant grisea. The addition of 100 µM Mn2+ did not
restore this defect. We surmised that PaSod2 is a target gene of transcription factor GRISEA. To verify this assumption, Northern analysis of PaSod2 transcripts was performed,
confirming that this gene is not expressed in mutant grisea (not
shown). The same results were obtained with a more sensitive reverse
transcription-PCR analysis, which was performed using RNA preparations
of the wild-type strain and of mutant grisea. Transcripts were
amplified using a set of specific PaSod2 primers. As an
internal control, a pair of specific primers for the glyceraldehyde
dehydrogenase gene (Gpd) of P. anserina was
included in the PCR (Fig. 8). A PCR
product was obtained only in cDNA preparations of the wild-type strain grown in standard medium but not in medium containing additional copper. No transcript was detected in the corresponding cDNA
preparation of mutant grisea, supporting the idea that
PaSod2 is a target gene of transcription factor GRISEA.

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|
FIG. 8.
PaSod2 is a putative target gene of
transcription factor GRISEA. RNA was isolated from wild-type and grisea
cultures grown with 100 µM CuSO4 or without supplements.
RNA was treated with DNase I to reduce DNA contamination and
subsequently reverse transcribed by using an oligo(dT) primer.
Reverse-transcribed RNA samples (cDNA) were used as a template. The
PaSod2 transcripts were amplified by using primers MnSOD1
and MnSOD2 (see Materials and Methods). The Gpd gene was
amplified in the same reaction and served as an internal control
(positive control). DNase I-treated RNA (RNA) was included to exclude
amplification of DNA (negative control). Lane m, 100-bp size standard.
Numbers on the left indicate fragment sizes in kilobase pairs.
|
|
The activity of PaSOD2 decreases during aging of wild-type cultures
of P. anserina.
Mitochondrial oxidative stress is thought to
be a main contributor to aging processes in different biological
systems and is thought to generally increase during aging (for a review
see reference 38). In P. anserina, the
increase in ROS during aging is thought to be the result of two
processes and consequences: first, protein damage of the respiratory
chain by ROS leaking from the electron transfer chain during energy
transduction; and second, the inability of senescent cultures to
replace affected respiratory chains. This inability is due to extensive
rearrangements of the mtDNA occurring during aging, which lead to the
deletion of genes coding for different components of the respiratory
chain (39). Consequently, the performance of the
respiratory chain becomes reduced during senescence, and the generation
of ROS increases. Since PaSOD2 is part of the mitochondrial defense
system directed against oxidative stress, we investigated whether
levels of PaSOD2 increase during aging of the wild-type strain. SOD
activity was determined in protein extracts of juvenile and senescent
cultures grown in standard medium. In addition, extracts of juvenile
cultures grown in a medium supplemented with 100 µM paraquat and 100 µM Mn2+ were investigated. Whereas manganese clearly
induced PaSOD2 activity, paraquat did not lead to such an induction.
Moreover, in the wild-type strain, PaSOD2 levels were significantly
reduced in senescent cultures (Fig. 9),
whereas PaSOD1 levels increased. These data clearly demonstrated that
the oxidative stress defense capacity of mitochondria is reduced in
senescent cultures. The expression of PaSod2 is most
probably reduced due to the previously observed increase in cytoplasmic
copper in senescent cultures, which also explains the increased
activity of PaSOD1 in these cultures. We have shown that the transcript
levels of PaMt1, coding for a Cu-metallothionein, greatly
increase during senescence (5). Therefore, the observed decrease is not just a general degenerative effect observed later in
the lifespan.

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FIG. 9.
The activity of PaSOD2 is reduced in senescent cultures
of the wild-type strain. Proteins of two independent juvenile (juv.)
and two senescent (sen.) cultures were isolated, as well as proteins
from a juvenile strain grown for 4 h on 100 µM paraquat (+ Pq)
or for 4 days on 100 µM MnCl2 (+ Mn2+). These
proteins were subjected to native polyacrylamide gel electrophoresis.
SOD activity was determined by staining of the gel.
|
|
 |
DISCUSSION |
In this study, we investigated the impact of cellular copper on
the longevity of the filamentous ascomycete P. anserina. We first demonstrated that a reduction of the copper concentration in the
growth medium led to an increased life span for the wild-type strain.
This is not in concordance with a direct role of the active copper-modulated transcription factor GRISEA in bringing life to an
end, as it may be concluded from the demonstration that Grisea is not expressed in the long-lived loss-of-function
mutant grisea. The data presented in this work underscore the
significant role of cellular copper, which has also been suggested by
previous mutant rescue experiments (8, 33).
A retrograde response in P. anserina.
Since there is a
huge body of experimental data demonstrating a crucial role for
mitochondria in senescence in the two filamentous ascomycetes P. anserina and N. crassa (for review see references 21, 39, and 40), and because
copper is a cofactor of the mitochondrial COX complex, we investigated
the performance of mitochondria in wild-type and nuclear long-lived
mutant grisea. As expected, the copper uptake mutant showed a clear
reduction in COX activity. Energy transduction proceeds mainly via the
cyanide-resistant alternative oxidase, PaAOX. The cloning and
characterization of the corresponding gene revealed a strong
conservation of the protein with all of the previously demonstrated
crucial amino acid residues. However, in sharp contrast to plants, in
which the expression of the AOX becomes induced by copper
(42), in P. anserina, higher copper levels lead
to a reduction of PaAox transcripts.
The expression of
PaAox under low-copper conditions appears
not to be directly related to cellular copper depletion, e.g.,
as the
result of the activation of a copper-repressed transcription
factor,
but is rather due to the fact that reduced copper levels
give rise to
dysfunctional mitochondria. This conclusion can be
drawn from the
demonstration that the same response is induced
in the two
COX-deficient, long-lived strains ex1 and cox5::BLE
(
12,
50). In these two strains, the uptake of copper is
not
affected. It thus appears that in
P. anserina, like in
yeast,
dysfunctional mitochondria signal to the nucleus and induce the
expression of nuclear genes to compensate for the defect in
mitochondria.
In yeast, such a mechanism was previously named the
retrograde
response (
30). It is controlled by the three
regulatory proteins
RTG1, RTG2, and RTG3 (
32,
47,
52).
Importantly, it was recently
shown that the induction of the retrograde
response postpones
senescence, leading to an increased replicative life
span for
the corresponding yeast strains (
24). Although we
currently
do not know whether homologs of the regulator proteins
involved
in the retrograde response in yeast play a role in
P. anserina,
the situation in the long-lived mutants of
P. anserina mentioned
above clearly suggests that a retrograde
response with an impact
on life span can be induced in
P. anserina. Moreover, it is intriguing
that this response appears to
be specifically induced in mutants
with a compromised COX function.
This was clearly demonstrated
not only by oxygen uptake measurements
but also, for the first
time, by Western blot analysis. Regardless of
whether complex
IV is impaired by deletions of mitochondrial or nuclear
genes
coding for subunits of this respiratory chain complex or by the
depletion of copper as a crucial cofactor of COX, the outcome
seems to
be the same: the signaling of dysfunctional mitochondria
to the nucleus
and the induction of
PaAox.
Since the mtDNA of
P. anserina encoding different subunits
of complex I (NADH dehydrogenase) and of complex V (ATP synthetase)
of
the inner mitochondrial membrane is rearranged during senescence,
resulting in dysfunctional mitochondria, it was reasonable to
expect
that a retrograde response is also induced during senescence.
We were
surprised to see that this is not the case. However, if
one looks more
closely at the effect of an induction of
PaAox,
the obtained
results can be explained by the fact that the expression
of
PaAox can rescue mitochondria only if complex I is
functional.
At this point it needs to be emphasized that
P. anserina is a
strict aerobe depending on respiration. Since the
alternative
oxidase is located upstream of complexes III and IV,
generation
of a proton gradient, a prerequisite for ATP synthesis at
complex
V, is dependent on a functional complex I. It thus makes sense
that the retrograde response is induced only if an impaired function
can be rescued by the induction of specific nuclear genes. In
different
long-lived strains of
P. anserina, this is clearly the
case
(
12,
50). However, mitochondrial dysfunction as the result
of age-dependent reorganization of the mtDNA leads to impairments
of
the whole respiratory chain, including complex I. Thus, an
induction of
the retrograde response in senescent cultures cannot
be
expected.
Age-related increase of copper stress.
What is the molecular
basis of the observed failure to induce the alternative pathway in
senescent cultures of P. anserina, cultures which are
clearly affected in their mitochondrial functions? The investigations
addressing the age-related capacity of the enzymatic defense system
against copper and oxidative stress, which were performed in a previous
study as well as in this one, provided clear evidence that cytoplasmic
copper stress increases during aging of wild-type cultures of P. anserina. First, we demonstrated that the expression of a gene,
PaMt1, encoding a Cu-metallothionein strongly increases
during senescence of wild-type cultures. In the copper uptake mutant
grisea, this was not the case (5). Second, transcript
levels of PaSod2, a target gene of transcription factor
GRISEA, decrease (this study). Third, the copper-dependent activity of
PaSOD1 increases during aging of wild-type cultures (this study).
Fourth, the expression of PaCtr3, which encodes a
high-affinity copper transporter, is copper regulated and repressed during senescence (unpublished data). Consequently, since the expression of the gene coding for the alternative oxidase was also
found to be repressed by elevated copper levels, the reduced PaAox transcript levels and the almost undetectable protein
levels in senescent cultures can easily be explained by increased
levels of cytoplasmic copper. In addition, the reduced activity of
PaSOD2, the impairments of the respiratory chain, and the increased
copper concentration observed during aging result in increased levels of ROS, contributing to the repression of PaAox.
But what are the reasons for the suggested cytoplasmic copper increase?
In this respect the role of mitochondria in apoptosis
in animal systems
is of special interest. It is clear that mitochondria,
as the result of
different cellular stresses, change their membrane
permeability
characteristics. It has been shown in animal systems
that cytochrome
c and the Smac/DIABLO protein are released from
mitochondria
and give rise to apoptosis (
11,
20,
45,
56).
We suggest
here that during the senescence of
P. anserina, copper
normally bound to COX is released from mitochondria and induces
the
different molecular pathways mentioned above. This idea is
supported by
reduced cyanide-sensitive respiration in senescent
P. anserina cultures. Moreover, it is intriguing that
PaMt1 transcript
levels in senescent cultures of the
long-lived mutant grisea are
not increased in comparison to those in
juvenile cultures. Only
in middle-aged cultures is a moderate increase
observed. These
data seem to suggest that copper from a limited number
of functional
COX complexes is released rather early during the fungal
life
span. In later stages, there is no mitochondrial copper reservoir
left that can lead to the marked effect on
PaMt1,
PaCtr3, and
PaSod2 transcript levels observed in
the wild-type strain (
5).
Life span extension in the copper uptake mutant grisea.
Previous investigations and the data from this study clearly
demonstrate the important impact of cellular copper levels on longevity. From these data it is clear that impairments of the molecular machinery regulating cellular copper levels have specific consequences. In long-lived mutant grisea, the primary cause of such an
impairment is a loss-of-function mutation in the gene coding for the
copper-modulated transcription factor GRISEA. As a consequence, a gene
coding for a high-affinity copper transporter is not expressed, and
import of copper is restricted to a low-affinity uptake system. Under
these conditions, complex IV of the respiratory chain is affected. Only
a small number of functional COX-dependent respiratory chains are
assembled. Most mitochondria are dysfunctional and signal to the
nucleus to induce PaAox. Energy transduction via the
alternative pathway leads to a reduced generation of mitochondrial ROS.
Therefore, a block in the expression of PaSod2 (a target gene of GRISEA), as the result of the absence of this transcription factor in mutant grisea, is not a major problem. In addition, in
contrast to that of the wild-type strain, the mtDNA of mutant grisea
remains stable during senescence and is available to replace damaged
mtDNA-encoded components of the respiratory chain. Finally, the
inactivity of PaSOD1 might explain why the increase in life span is not
as pronounced as in mutant ex1 and most cox5::BLE strains.
In summary, the data presented in this study underscore the role of
copper in the control of life span. This becomes clear
from the
analysis of both the wild-type strain and a copper uptake
mutant. A
molecular mechanism able to sense mitochondrial dysfunction
and to
adapt the system to altered situations, the so-called retrograde
response, was demonstrated in
P. anserina. The induction of
the
retrograde response appears to have a significant impact on life
span, indicating that metabolism plays an important role. An
alternative
oxidase was found to be part of this pathway. The
expression of
the gene encoding PaAOX is controlled in a way different
from
that found in higher plants. Copper was found to play a
significant
role in the expression of
PaAox and of
PaSod2. Finally, and very
surprisingly, different lines of
evidence suggest the age-related
release of copper from mitochondria.
Such a process is probably
the result of changes in the permeability of
mitochondrial membranes
that are demonstrated to occur during apoptosis
in animal systems.
It will be of particular interest to investigate
these similarities
between senescence in
P. anserina and
apoptosis in more
detail.
 |
ACKNOWLEDGMENTS |
We thank Bernd Ludwig and Ute Pfitzner (Frankfurt, Germany) for
introducing cytochrome oxidase measurements and for providing anti-
ATPase antibodies.
This work was supported by a grant of the Deutsche
Forschungsgemeinschaft (Bonn, Germany) to H.D.O.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Botanisches
Institut, Johann Wolfgang Goethe-Universität, Marie-Curie-Strasse
9, D-60439 Frankfurt am Main, Germany. Phone: 49 69 798 29264. Fax: 49 69 798 29363. E-mail: osiewacz{at}em.uni-frankfurt.de.
Present address: University of Nebraska, School of Biological
Sciences, 348 Manter Hall, Lincoln, NE 68588-0118.
 |
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Molecular and Cellular Biology, January 2001, p. 390-399, Vol. 21, No. 2
0270-7306/01/$04.00+0 DOI: 10.1128/MCB.21.2.390-399.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
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