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Molecular and Cellular Biology, November 2001, p. 7403-7415, Vol. 21, No. 21
0270-7306/01/$04.00+0 DOI: 10.1128/MCB.21.21.7403-7415.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
SEL-10 Is an Inhibitor of Notch Signaling That
Targets Notch for Ubiquitin-Mediated Protein Degradation
Guangyu
Wu,1,2
Svetlana
Lyapina,3
Indranil
Das,1,2
Jinhe
Li,4
Mark
Gurney,4
Adele
Pauley,4
Inca
Chui,1,2
Raymond J.
Deshaies,3,5 and
Jan
Kitajewski1,2,*
Departments of Pathology1 and
Obstetrics and Gynecology,2 Columbia
University, New York, New York 10032; Division of
Biology3 and Howard Hughes Medical
Institute,5 California Institute of Technology,
Pasadena, California 91125; and Department of Neurobiology,
Pharmacia & Upjohn, Kalamazoo, Michigan 490014
Received 25 January 2001/Returned for modification 23 March
2001/Accepted 19 July 2001
 |
ABSTRACT |
Notch receptors and their ligands play important roles in both
normal animal development and pathogenesis. We show here that the
F-box/WD40 repeat protein SEL-10 negatively regulates Notch receptor activity by targeting the intracellular domain of Notch receptors for ubiquitin-mediated protein degradation. Blocking of
endogenous SEL-10 activity was done by expression of a
dominant-negative form containing only the WD40 repeats. In the case of
Notch1, this block leads to an increase in Notch signaling stimulated by either an activated form of the Notch1 receptor or Jagged1-induced signaling through Notch1. Expression of dominant-negative SEL-10 leads
to stabilization of the intracellular domain of Notch1. The Notch4
intracellular domain bound to SEL-10, but its activity was not
increased as a result of dominant-negative SEL-10 expression. SEL-10
bound Notch4 via the WD40 repeats and bound preferentially to a
phosphorylated form of Notch4 in cells. We mapped the region of Notch4
essential for SEL-10 binding to the C-terminal region downstream of the
ankyrin repeats. When this C-terminal fragment of Notch4 was expressed
in cells, it was highly labile but could be stabilized by the
expression of dominant-negative SEL-10. Ubiquitination of Notch1 and
Notch4 intracellular domains in vitro was dependent on SEL-10. Although
SEL-10 interacts with the intracellular domains of both Notch1 and
Notch4, these proteins respond differently to interference with SEL-10
function. Thus, SEL-10 functions to promote the ubiquitination of Notch
proteins; however, the fates of these proteins may differ.
 |
INTRODUCTION |
Notch/LIN-12 receptors
regulate cell fate decisions during normal animal development and
pathogenesis. For example, in Caenorhabditis elegans, LIN-12 ensures that only one of two
undifferentiated gonadal cells develops into an anchor cell, while the
other cell becomes a ventral uterine precursor cell (8).
Notch genes have been linked to several human pathological conditions,
including cancer (21), vascular failure (13),
and schizophrenia (41).
The Notch/LIN-12 signaling pathway is activated when a ligand-receptor
interaction induces a proteolytic cleavage event that releases the
intracellular domain of the receptor from the cell membrane (25,
32, 35). Release of the intracellular domain of Notch is
dependent on presenilins (5, 35). Mammalian Notch ligands
are membrane-tethered proteins referred to as Jagged and Delta-like.
The signaling module of a Notch/LIN-12 receptor is the intracellular
domain that translocates to the nucleus to modulate gene expression
(11, 34). The nuclear activity of Notch/LIN-12 receptors
relies on the interaction between the intracellular domain of a
Notch/LIN-12 receptor and the transcription factor suppressor of
hairless (Su[H]) in Drosophila, Lag-1 in C. elegans (9, 37, 42), or CBF-1 or RBP-J
in
mammals (7, 11). The complex of Su(H) and the Notch/LIN-12
intracellular domain is a transcriptional activator and induces genes
with a regulatory sequence recognized by the Su(H) DNA binding domain.
Less is known about the subsequent down-regulation of Notch signaling.
Insight into this aspect of Notch signaling came from identification of
the C. elegans gene sel-10, which was
first identified in a genetic screen as a negative regulator of the Notch/LIN-12 signaling pathway (36). SEL-10 is related to
the budding yeast protein CDC4 (10). Members of the CDC4
family are characterized by an F-box domain (43) and seven
WD40 repeats, both protein-protein interaction motifs. In previous
studies, CDC4 family proteins have been shown to mediate target protein ubiquitination and degradation. Specifically, the WD40 repeats bind to
the target protein in a phosphorylation-dependent manner, while the
F-box domain tethers the protein to the SCF ubiquitin ligase
complex via binding to the SKP1 adapter (4, 6, 16, 33).
C. elegans sel-10 was shown to
functionally reduce lin-12 activity, and
coimmunoprecipitation studies demonstrated that C. elegans SEL-10 protein can associate with LIN-12 or
murine Notch4 protein (10). Based on this
precedent, we have proposed that SEL-10 is a conserved
F-box/WD40 repeat protein that negatively regulates Notch/LIN-12
signaling by targeting the intracellular domain of Notch/LIN-12
receptors for ubiquitin-mediated protein degradation (10).
To elucidate the mechanism by which SEL-10 regulates Notch/LIN-12
signaling, we analyzed the function of a human homologue of
C. elegans sel-10 in mammalian cells.
We demonstrate that human SEL-10 (hSEL-10) binds mammalian Notch
proteins in a domain-specific manner. We also show that Notch proteins
are phosphorylated and that the interaction between SEL-10 and Notch
proteins is phosphorylation dependent. Through an in vitro
ubiquitination assay, we show that SEL-10 can mediate Notch protein
ubiquitination and that Notch proteins are degraded by the 26S
proteasome in the cell. The proposed role of SEL-10 in Notch
ubiquitination and degradation is further supported by data showing
that a SEL-10 deletion mutant containing only the WD40 repeats can
stabilize Notch proteins by competing with wild-type SEL-10 for binding
to Notch. In principle, Notch down-regulation by SEL-10 may be
physiologically important for sensitizing cells to incoming signals
from Notch ligands; alternatively, SEL-10 may provide a general
mechanism for preventing excess Notch signaling.
 |
MATERIALS AND METHODS |
Cell lines and media.
Bosc23 cells (26) were
maintained in Dulbecco's modified Eagle's medium (DMEM) supplemented
with 10% fetal bovine serum and penicillin-streptomycin. Sf9 insect
cells were maintained in Gibco BRL SF900II medium. Hi5 insect cells
were maintained in Ex-Cell 400 medium (JRH Biosciences). Bacterial
strain DH10Bac was purchased from Gibco BRL.
Plasmids and vectors.
The following plasmids were
constructed by use of pQNCXII (14), a retrovirus vector
that drives gene expression under the control of a cytomegalovirus
(CMV) promoter. pQNClacZ contains the bacterial lacZ gene.
pQNCint-3HAHis expresses the entire Int-3 protein (amino acids 1412 to
1964 of the mouse Notch4 protein), whose C terminus is fused to
hemagglutinin (HA) and six-His tags. pQNCint-3CHAHis expresses a
C-terminal fragment of the mouse Notch4 protein (amino acids 1789 to
1964) with HA and six-His tags at the end. pQNCNotch1ICHAHis expresses
the rat Notch1 intracellular domain (amino acids 1747 to 2531) with HA
and six-His tags at its C terminus.
The following plasmids were constructed by use of pLNCX
(24), a retrovirus vector that drives gene expression
under the control of a CMV promoter. These plasmids express different
regions of the Int-3 protein and have been described previously
(40). pLNCint-3HA contains cDNA corresponding to the
Notch4 region expressed in the Int-3 insertion, beginning at
amino acid 1411; the Notch4(int-3) protein includes the entire
intracellular domain of Notch4 and additional sequences. The entire
protein is HA tagged at the C terminus. pLNCint-3
NHA expresses an
Int-3 protein lacking the region upstream of the CDC10/ankyrin repeats.
pLNCint-3
CHA expresses an Int-3 protein lacking the region distal to
the CDC10/ankyrin repeats. pLNCint-3
N
CHA expresses the
CDC10/ankyrin repeat region of Int-3. pLNCint-3
CDCHA expresses an
Int-3 protein lacking the CDC10/ankyrin repeats. All of the above Int-3
proteins have an in-frame HA tag at the C terminus. pHyTC-Jagged1 is
described elsewhere (38) and drives the expression of
full-length Jagged1 from the CMV promoter.
The following plasmids were constructed by use of pCS2-MT6
(
30), a vector that drives gene expression under the
control
of a CMV promoter. There are six myc tags upstream of the
polyclonal
sites. pCS2hSEL-10myc expresses full-length hSEL-10 protein
with
six myc epitope tags at the N terminus. pCS2hSEL-10WDmyc expresses
the WD40 repeat region (amino acids 184 to 540) of hSEL-10 with
six myc
epitope tags at the N terminus. pCS2hSEL-10Fmyc expresses
the F-box
region (amino acids 1 to 207) of hSEL-10 with six myc
epitope tags at
the N
terminus.
Plasmid pCS2HA-HsSKP1, which expresses HA-tagged full-length human
SKP1, was obtained from Mike Tyers, Mt. Sinai Hospital,
Toronto,
Canada.
The following plasmids were constructed by use of pFastBac (Gibco BRL),
a shuttle vector for making baculoviruses overexpressing
proteins in
insect cells. pFastBacInt-3HA encodes the entire mouse
Notch4(int-3)
sequence fused at its C terminus to an HA tag.
pFastBacInt-3CHAHis
encodes the C-terminal region (amino acids 1789 to
1964) of mouse
Notch4(int-3) fused at its C terminus to HA and six-His
tags.
pFastBacN1ICHAHis encodes the intracellular domain (amino acids
1747 to 2531) of rat Notch1 fused at its C terminus to HA and
six-His
tags. pFastBachSEL-10myc expresses full-length hSEL-10
with six
N-terminal myc epitope tags. pFastBachSEL-10WDmyc expresses
the WD40
repeat region (amino acids 184 to 540) of hSEL-10 with
six N-terminal
myc
tags.
Luciferase reporter assays.
Transient transfections were
performed by calcium phosphate precipitation. For assessment of
activated Notch signaling, HeLa cells (1.2 × 105) plated 1 day earlier in six-well plates were
transfected in triplicate with 50 ng of pQNCN1ICHA or 50 ng of pLNCX in
combination with 670 ng of luciferase vector (pGA981-6)
(15) and 160 ng of pLNClacZ (control for transfection
efficiency) and with or without 500 ng of pCS2hSEL-10WDmyc. To
determine ligand-induced Notch signaling, coculture assays were
performed using HeLa and Bosc23 cells. HeLa cells (1.2 × 106) plated 1 day earlier in 10-cm plates were
transfected with 7.5 µg of pBOS Notch1 (20), 4 µg of
pGA981-6, and 1 µg of pLNClacZ and with or without 1.5 µg of
pCS2hSEL-10WDmyc. Bosc23 cells (3 × 106)
plated 1 day earlier in 10-cm plates were transfected with either 25 µg of pHyTCJagged1 (38) or 25 µg of pLNCX. One day
after transfection, the HeLa and Bosc23 cells were cocultured in
triplicate (1:1) on six-well plates for 24 h. Luciferase activity
was determined 2 days posttransfection using an enhanced luciferase
assay kit (BD PharMingen), and
-galactosidase activity was
determined using a Galacto-Light Plus kit (PE Biosystems) and a
Berthold dual-injection luminometer.
Transfection, immunoprecipitation, and Western blot
analysis.
For transient transfection, a confluent plate of Bosc23
cells was split 1:3 on the day prior to transfection. For each 60-mm plate of cells, 4 µg of each plasmid DNA was transfected using the
calcium phosphate precipitation method. The total amount of DNA was
kept constant by supplementation with lacZ-containing plasmids.
Two days after transfection, cells were harvested and lysed in TENT
buffer (50 mM Tris-Cl [pH 8.0], 2 mM EDTA, 150 mM NaCl,
1% Triton
X-100) containing protease inhibitors (2 µg of aprotinin/ml,
2 µg
of leupeptin/ml, 2 µg of pepstatin/ml, 0.5 mM phenylmethylsulfonyl
fluoride [PMSF]). Lysates were clarified by centrifugation at
10,000 ×
g for 10 min, and protein content was
determined using
a Bio-Rad protein assay kit. Equal amounts of extracts
from samples
were precleared with Sepharose CL-4B beads, incubated with
antibodies
(50 µl of 12CA5 anti-HA supernatant, 200 µl of 9E10
anti-myc supernatant,
or 2 µl of anti-FLAG antibody) for
2 h at 4°C, and then incubated
with 40 µl of a 50% slurry of
protein A-Sepharose for 1 h at 4°C.
The protein A-Sepharose
beads were washed with TENT buffer three
times by vortexing for 5 min
each time. The beads were boiled
in 30 µl of protein gel loading
buffer (50 mM Tris-Cl [pH 6.8],
100 mM dithiothreitol, 2%
[wt/vol] sodium dodecyl sulfate [SDS],
0.1% bromphenol blue, 10%
[wt/vol] glycerol), electrophoresed
on an SDS-polyacrylamide gel, and
transferred to a polyvinylidene
difluoride
membrane.
A Western blot was blocked overnight at 4°C with TBST (10 mM Tris
[pH 8.0], 150 mM NaCl, 0.2% Tween 20) containing 1% bovine
serum
albumin (BSA). The blot was then incubated with primary
antibody
diluted (1:50 for 12CA5; 1:10 for 9E10; 1:2,000 for anti-FLAG)
in
TBST-BSA for 1 h, washed three times for 5 min each time with
TBST, and incubated with secondary antibody (anti-mouse
immunoglobulin-horseradish
peroxidase, 1:10,000; Amersham) in TBST-BSA
for 1 h. After three
washes, the signal was visualized by
chemiluminescence (Amersham
ECL
kit).
12CA5 anti-HA antibody was obtained from BabCo., Richmond, Calif. 9E10
anti-myc antibody was prepared from culture supernatants
of the 9E10
hybridoma (
18). Anti-FLAG antibody was purchased
from
Sigma.
Dephosphorylation of proteins with CIP.
Immunoprecipitation
was carried out to obtain the protein to be treated with calf
intestinal phosphatase (CIP). At the end of the immunoprecipitation,
the protein A-Sepharose beads were thoroughly washed with TENT buffer,
and the solution was completely removed by aspiration. The beads were
then suspended in 30 µl of buffer containing 2 µl of CIP (New
England Biolabs) and incubated at 37°C for 2 h. Ten microliters
of 4× protein gel loading buffer was added to the reaction mixture.
The sample was boiled, loaded onto an SDS-polyacrylamide gel, and
subjected to Western blot analysis.
Pulse-chase labeling assay.
Bosc23 cells were transfected
with plasmid DNA as described above. Two days after transfection, the
cells were washed and incubated in DMEM lacking methionine (Met) and
cysteine (Cys) for 0.5 h to deplete Met and Cys. Cells were then
incubated for 0.5 h in labeling DMEM, containing
35S-labeled Met and Cys at 0.5 mCi/ml. The
labeling medium was then replaced with regular DMEM. Cells were
harvested every 0.5 h during the chase period for up to 2.5 h. Lactacystin (10 µM) was added to both pulse-labeling and
pulse-chase media.
The harvested cells were lysed and immunoprecipitated as described
above. The precipitates were separated on an SDS-polyacrylamide
gel.
The gel was fixed for 30 min in isopropanol-water-acetic
acid
(25:65:10), stained for 30 min with Amplify (Amersham), vacuum
dried,
and exposed to X-ray film to visualize and quantitate the
signal.
Generation of baculovirues and in vitro ubiquitination
assays.
Baculoviruses used in the in vitro ubiquitination assays
were generated with the Gibco BRL FastBac system by following the manufacurer's protocols. Hi5 insect cell lysates were prepared 48 h postinfection from cells coinfected with baculoviruses that expressed
SEL-10myc or SEL-10WDmyc plus hCUL1, hSKP1, and hHRT1. Cell lysis was
achieved by incubating cells in buffer containing 20 mM HEPES (pH 7.4),
150 mM NaCl, 50 mM NaF, 60 mM
-glycerophosphate, 0.3% Triton
X-100 100 µM N-acetyl-Leu-Leu-norleucinal (LLnL), and protease inhibitor cocktail (Sigma). Crude Hi5 cell lysates (500 µg) were incubated with 10 µl of anti-myc beads for 2 h at 4°C to allow binding of myc-tagged SEL-10 subunits. Beads were washed
three times with lysis buffer and incubated with 500 µg of crude
lysates prepared from Hi5 cells infected with baculoviruses that
expressed either Notch4(int-3)HA, Notch4(int-3)CHAHis6, or N1ICHAHis6
to allow substrate binding to SCF. Beads were washed three times with
lysis buffer, washed two times with 20 mM HEPES (pH 7.4)-100 mM
potassium acetate-1 mM dithiothreitol, and incubated with the
following ubiquitination reaction components: 50 ng of His6yUBA1, 500 ng of hCDC34, 1 µl of 10× ATP-regenerating system, 1 µl of 10× reaction buffer (6), and 5 µg of either
ubiquitin or methylubiquitin (Boston Biochem). Ubiquitination reactions were carried out for 60 min at 30°C and terminated by the addition of
protein gel loading buffer. The samples were fractionated by SDS-polyacrylamide gel electrophoresis (PAGE), and Notch proteins were
visualized by Western blotting with anti-HA antibodies.
 |
RESULTS |
hSEL-10 is an F-box/WD40 protein that inhibits Notch
signaling.
Figure 1A presents a
schematic of the identified domains of the hSEL-10 protein. The full
coding sequence for human SEL-10 translates into a
540-amino-acid protein (GenBank accession no. AY008274). Like its
homologue in C. elegans, hSEL-10 contains an
N-terminal F-box domain followed by seven WD40 repeats. The predicted
protein sequences of C. elegans Sel-10 and
hSEL-10 show 47.6% identity and approximately 57% similarity. Higher
conservation is observed in the WD40 repeats (60% identity) than in
the N terminus and F-box domains (30 and 35% identities,
respectively). The human Sel-10 gene reported here is similar to
FLJ117071 of the New Energy and Industrial Development Organization
(NEDO) human cDNA sequencing project and is also referred to as
FBXW6.

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FIG. 1.
hSEL-10 and its effects on Notch signaling. (A)
Comparison of C. elegans SEL-10 and
hSEL-10 proteins. Percentages indicate amino acid identities between
homologous domains of the two proteins. (B) Epitope-tagged hSEL-10
proteins used in biochemical studies. Six myc epitope tags (6Xmyc) were
engineered to fuse in frame to three SEL-10 variants at their N
termini. (C and D) A SEL-10 variant expressing only the WD40 repeats
upregulates signaling of activated Notch1 (C) and Jagged1-induced
signaling of full-length Notch1 (D). Notch signaling was assessed by a
luciferase assay using a reporter construct containing the RBP-J
binding sites. In panel C, an activated Notch1 construct (Notch1IC) and
the reporter construct were transfected with or without SEL-10WDmyc
into HeLa cells. Reporter gene transactivation was measured 2 days
posttransfection, and the fold induction of luciferase activity was
calculated relative to that in HeLa cells that were transfected with an
empty vector (pLNCX) and the reporter construct. In panel D, Jagged1 or
pLNCX (control) was transiently expressed in Bosc23 cells. These cells
were cocultured with HeLa cells transiently expressing the full-length
Notch 1 receptor, luciferase reporter, and SEL-10WDmyc. Luciferase
activity was measured 1 day after coculturing. Each bar represents the
mean from experiments done in triplicate. Error bars represent standard
deviations.
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|
To explore the activity and binding potential of hSEL-10, the coding
sequence for six consecutive myc epitope tags was added
to the 5' end
of
SEL-10 (Fig.
1B). We also generated two variants
of
SEL-10; SEL-10Fmyc contains the N terminus through the F-box
and
terminates just prior to the first WD40 repeat, and SEL-10WDmyc
contains the WD40 repeats but not the F-box or any sequences upstream
of the F-box (Fig.
1B). By analogy to mammalian F-box/WD40 repeat
family members, we predict that the F-box mediates association
with the
ubiquitination machinery and that the WD40 repeats provide
a binding
domain for
substrates.
We were interested in how SEL-10 might interact, both physically and
functionally, with a classic Notch intracellular domain
protein,
Notch1IC, and an oncogenic form of the Notch4 protein.
We used a
variant of the Notch4 protein, originally referred to
as int-3, and we
refer to this variant as Notch4(int-3) (
39).
It
contains a short region of the extracellular sequence, the
transmembrane domain, and the intracellular domain of mouse Notch4
(see
Fig.
3) but does not contain a signal sequence. Notch4(int-3)
behaves
as a gain-of-function mutant of Notch4 (
12,
38,
40)
and
promotes mammary tumorigenesis in
mice.
Engineered versions of F-box/WD40 proteins, such as

-TRCP,
which regulates

-catenin stability, that contain only the WD40
repeats function as dominant-negative proteins (
17,
19,
46).
We asked whether a variant of SEL-10 containing only the
WD40
repeats (SEL-10WDmyc; Fig.
1B) could inhibit endogenous SEL-10
function. Using an in vitro culture system, we examined how the
overexpression of SEL-10WDmyc influences Notch receptor signaling.
Receptor activation was assessed with a luciferase reporter assay
that
responds to the transcriptional activation of a downstream
Notch
signaling component, RBP-J

. The expression of an activated
Notch1
receptor (Notch1IC) in HeLa cells induced reporter expression
greater than 500-fold relative to that in control HeLa cells
transfected
with the reporter and an empty vector (Fig.
1C).
Coexpression
of the SEL-10WDmyc construct with activated Notch1
increased reporter
expression by approximately twofold (Fig.
1C),
indicative of enhanced
Notch signaling. Notch4(int-3) expression
induced reporter expression
greater than 400-fold; however,
coexpression of the SEL-10WDmyc
construct with Notch4(int-3) only
minimally increased reporter
activity (data not shown). Thus, Notch1-
and Notch4-induced signaling
responded differently to interference with
endogenous SEL-10 function.
We also overexpressed full-length SEL-10
with Notch proteins and
did not find a significant effect on signaling
via either Notch1IC
or Notch4(int-3) (data not shown), suggesting that
sufficient
SEL-10 activity is present within cells to mediate its
activity.
We determined whether the SEL-10WDmyc construct could augment
ligand-induced activation of Notch1 signaling. For these experiments,
we used a coculture reporter assay with one cell type expressing
the
Notch ligand, Jagged1, and another cell type expressing full-length
Notch1 and a reporter. Bosc23 cells (a derivative of human HEK
293 cells) expressing either Jagged1 or an empty vector were cocultured
with HeLa cells expressing full-length Notch1, the reporter, and
SEL-10WDmyc (Fig.
1D). We observed approximately a fourfold induction
in reporter activation in cocultures of cells expressing Jagged1
and
Notch1 relative to that in cocultures in which Notch1 was
expressed
without exogenous Jagged1. In cocultures of cells expressing
Jagged1
with cells expressing both Notch1 and SEL-10WDmyc, a further
2.5-fold
increase in reporter induction was observed. These results
demonstrate
that with activated Notch1 signaling and with Jagged1-induced
Notch1
signaling, expression of the SEL-10WDmyc protein enhanced
Notch
signaling. Thus, the truncated SEL-10 protein acts in a
dominant-negative manner, potentially by competing with endogenous
SEL-10 for binding to Notch. We postulate that the augmented Notch1
signaling that we observed is due to a blockade of SEL-10-mediated
degradation of the Notch1
protein.
SEL-10 binds Notch through the WD40 domain and SKP1 through the
F-box domain.
To investigate whether hSEL-10 is involved in Notch
protein ubiquitination and degradation, we first studied the physical interaction between hSEL-10 and mouse Notch4 proteins using
coimmunoprecipitation assays. Previous reports suggested that detecting
F-box/WD40-target protein interactions is difficult due to the extreme
lability of the target protein after ubiquitination. In initial studies we found that hSEL-10 binding to the oncogenic Notch4(int-3) variant could be detected, and we thus focused our analysis on defining this
interaction in detail. Binding assays were conducted after coexpression
of the myc-tagged variants of hSEL-10 and HA-tagged Notch4(int-3)
(40). Bosc23 cells were used for transient transfections with various expression constructs. Cell extracts were prepared and
immunoprecipitated with either anti-HA or anti-myc antibodies. Western
blotting of the immunoprecipitates demonstrated that Notch4(int-3)HA (Fig. 2A, bottom panel) and all three
SEL-10 variants (Fig. 2A, second panel from the top) were recovered at
comparable levels. By probing the anti-myc immunoprecipitates with
anti-HA antibody, we demonstrated that Notch4(int-3)HA associated with
either full-length hSEL-10 (Fig. 2A, top panel, lane 6) or the WD40
domain (Fig. 2A, top panel, lane 8) but not with the F-box domain (Fig.
2A, top panel, lane 7). We confirmed the interaction between
Notch4(int-3) and SEL-10 proteins by immunoprecipitating
Notch4(int-3)HA with anti-HA antibody and then probing for myc-tagged
SEL-10 proteins. As shown in Fig. 2A (third panel from the top),
full-length hSEL-10 (lane 6) but not the F-box domain (lane 7)
complexes with Notch4(int-3)HA; SEL-10WDmyc (lane 8) comigrated with
the heavy chain of immunoglobulin and therefore could not be visualized
in this experiment. In conclusion, hSEL-10 physically associates with
mouse Notch4(int-3) through the WD40 domain, whereas the F-box domain
is not required for this interaction.

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FIG. 2.
hSEL-10 interacts with Notch through the WD40 repeats
and SKP1 through the F-box. (A) Physical interactions between hSEL-10
and mouse Notch4. HA-tagged Notch4(int-3) protein was coexpressed with
three six-myc-epitope-tagged SEL-10 variants in Bosc23 cells by
transient transfection. Immunoprecipitation (IP) and Western
blotting were performed using either anti-HA or anti-myc antibody to
demonstrate that the proteins are well expressed and properly
immunoprecipitated (second panel from the top and bottom panel).
Anti-HA antibody was then used to probe the anti-myc antibody
immunoprecipitates to reveal Notch4(int-3)HA protein in immune
complexes of either SEL-10myc or SEL-10WDmyc (top panel). Similarly,
anti-myc antibody was used to probe anti-HA antibody immunoprecipitates
to reveal SEL-10 proteins associated with Notch4(int-3)HA (third panel
from the top). (B) Physical interactions between hSEL-10 and human
SKP1. HA-tagged SKP1 was coexpressed with three SEL-10 variants in
Bosc23 cells. Immunoprecipitation followed by Western blotting using
anti-HA or anti-myc antibody shows that the proteins are well expressed
and precipitated efficiently (second panel from the top and bottom
panel). Anti-myc antibody immunoprecipitates were probed with anti-HA
antibody (top panel) to reveal SKP1HA associated with SEL-10 proteins,
and anti-myc antibody was used to detect SEL-10 proteins in
immunoprecipitates of SKP1HA (third panel from the top). Arrows
indicate the signal of SKP1HA, which comigrates with the light chain of
the antibody.
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|
Based on previous studies of F-box/WD40 proteins, we predict that the
F-box domain of SEL-10 should interact with other components
of the
ubiquitination machinery, such as SKP1. We tested this
possibility with
coimmunoprecipitation assays using HA-tagged
full-length human SKP1 and
myc-tagged SEL-10 proteins. As shown
in Fig.
2B (top panel, lanes 6, 7, and 8), SKP1HA interacted with
full-length hSEL-10 and the F-box domain
but not with the WD40
domain. Consistent with this observation, we were
able to detect
full-length SEL-10 and the F-box domain in the
immunoprecipitates
of SKP1 (Fig.
2B, third panel from the top, lanes 6 and 7). This
observed interaction implies that SEL-10, like other
F-box/WD40
family proteins, is part of an E3 ubiquitin ligase that
mediates
the ubiquitination and degradation of target
proteins.
The Notch4 C-terminal domain binds to hSEL-10.
To map the
domains of Notch4(int-3) that are required for the physical interaction
between Notch4 and SEL-10, we tested a series of Notch4(int-3) deletion
variants (schematized in Fig. 3A) for their ability
to complex with full-length hSEL-10. We chose the Notch4(int-3)
proteins to map domains of interaction because of the ease of
detection of Notch-SEL-10 complexes.

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FIG. 3.
The C-terminal domain of Notch4 mediates the
interaction of Notch4 and SEL-10. (A) Epitope-tagged Notch4(int-3)
deletion variants. The HA tag is labeled in yellow, and six-His
tags are labeled in red. (B) Physical interactions between
SEL-10 and Notch4 deletion variants. Six-myc-epitope-tagged full-length
hSEL-10 was coexpressed with HA-tagged Notch4(int-3) deletion variants
in Bosc23 cells. All the proteins were well expressed (second panel
from the top and bottom panel), except for NT CTHA (bottom panel,
lanes 5 and 11). Anti-HA antibody was used to detect Notch4 proteins in
the immunoprecipiates of SEL-10myc (top panel), and anti-myc antibody
was used to detect SEL-10myc in the immunoprecipitates of Notch4
proteins (third panel from the top). (C) A C-terminal fragment of
Notch4 complexes with SEL-10 in the presence of a proteasome inhibitor.
Notch4(int-3)CHAHis, a fragment of Notch4 containing only the
C-terminal domain, was tested for its ability to coimmunoprecipitate
with SEL-10. Before the coimmunoprecipitation assays, cells were either
treated with lactacystin, a specific proteasome inhibitor, or left
untreated. The bottom two panels show that both Notch4(int-3)C and
SEL-10 are well expressed. Notch4(int-3)C can be detected by anti-HA
antibody in the immune complex of SEL-10myc (top panel). Arrows in the
top two panels indicate the signal of Notch4(int-3)CHAHis, and the
arrow in the bottom panel indicates the major species of SEL-10myc
protein. IP, immunoprecipitation.
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|
Coexpression of myc-tagged SEL-10 and HA-tagged Notch4(int-3)
variants was monitored by immunoprecipitation of SEL-10 with
anti-myc
antibody; the immunoprecipitates were then probed with
anti-HA
antibody. This coimmunoprecipitation assay revealed that
N4(int-3),
N4(int3)

N, and N4(int-3)

CDC proteins interacted with
SEL-10 (Fig.
3B, top panel, lanes 8, 9, and 12). When the coimmunoprecipitation
was conducted in a complementary fashion by immunoprecipitating
with anti-HA antibody for Notch4 proteins and then probing with
anti-myc antibody for SEL-10, we detected SEL-10 in the immune
complexes of N4(int-3) and N4(int-3)

N (Fig.
3B, third panel from
the
top, lanes 8 and 9). All three of the Notch4(int-3) variants
that
interact with SEL-10 contain the C-terminal domain, and removal
of this
domain abolishes the interaction between Notch4(int-3)
and SEL-10.
These results suggest that the C-terminal domain of
Notch4(int-3),
distal to the CDC10/ankyrin repeats, binds SEL-10.
We found that the C-terminal domain of Notch4(int-3) alone was
sufficient to bind SEL-10 in coimmunoprecipitation assays using
full-length hSEL-10 and a Notch4(int-3) fragment containing only
the C-terminal domain, N4(int-3)C. N4(int-3)C could be
detected
after expression in Bosc23 cells (Fig.
3C, middle panel, lanes
2, 4, 6, and 8). However, when coimmunoprecipitations were carried
out
under standard conditions, as described above, we failed to
detect a
complex between Notch4(int-3)C and hSEL-10. To prevent
ubiquitin-mediated turnover, we treated cells with a specific
proteasome inhibitor, lactacystin, before harvest. After
lactacystin
treatment, we detected N4(int-3)C proteins in the
immunoprecipitates
of hSEL-10 (Fig.
3C, top panel, lane 8). Thus,
under normal conditions,
the interaction between N4(int-3)C and hSEL-10
is probably transient
and difficult to detect due to
proteasome-dependent turnover of
SEL-10-bound Notch4(int-3)C.
SEL-10 binds to phosphorylated forms of Notch4(int-3)
proteins.
Upon Western blot analysis of Notch4(int-3) variants, we
noted that some of the Notch4(int-3) proteins appeared as multiple bands (Fig. 3B, bottom panel, lanes 9 and 12), which might represent Notch protein modification by phosphorylation. To address this question, we determined if the pattern of migration could be altered by
phosphatase treatment of immunoprecipitated Notch4(int-3) proteins. We
focused on the N4(int-3)
N variant, which contains the CDC10 repeats
and the C-terminal region (Fig. 3A). SEL-10myc and N4(int-3)
NHA were coexpressed in Bosc23 cells. When immune complexes containing N4(int-3)
NHA were probed with anti-HA antibody, three bands, ranging
from 48 to 51 kDa, were detected (Fig. 4,
lane 1). After treatment with CIP, the top two bands were significantly
diminished, indicating that they had become dephosphorylated (Fig. 4,
lane 2).

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FIG. 4.
SEL-10 binds to phosphorylated Notch.
Notch4(int-3) NTHA and SEL-10myc were coexpressed in Bosc23
cells by transient transfection. Immunoprecipitation (IP) was performed
with either anti-HA or anti-myc antibody. Each precipitate was divided
into two tubes; one was treated with CIP, and one was left untreated.
The blot was probed with anti-HA antibody to visualize
Notch4(int-3) NTHA precipitated either directly by anti-HA antibody
or indirectly by anti-myc antibody. Arrows indicate the three species
of Notch4(int-3) NTHA. Stars indicate the heavy and light
chains of immunoglobulin.
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|
We next determined which forms of N4(int-3)

N were associated with
SEL-10. The same cell lysate was immunoprecipitated with
anti-myc
antibody to isolate SEL-10myc and then probed with anti-HA
antibody. The slowest migrating form of N4(int-3)

NHA protein
was the
predominant form associated with SEL-10 (Fig.
4, lane
3). This immune
complex was treated with CIP, and the slower migrating
forms were
diminished at the expense of the faster migrating forms
(Fig.
4, lane
4). This observation suggests that hSEL-10 preferentially
binds to
phosphorylated forms of Notch4(int-3) and is consistent
with the
behavior of CDC4-like proteins, which bind to phosphorylated
target
proteins. The bulk population of N4(int-3)

N molecules
was
efficiently dephosphorylated by CIP, whereas those bound to
SEL-10 were
not (Fig.
4, compare lanes 2 and 4). We speculate
that the direct
interaction of SEL-10 with phosphate residues
on N4(int-3)

N may have
shielded N4(int-3)

N from access to CIP.
We also noted that Notch4
variants that contain the C terminus
[N4(int-3)

N, N4(int-3)

CDC,
and N4(int-3)C] typically migrated
as several species. These other
Notch4(int-3) variants were also
tested in this assay, and the slower
migrating forms of these
proteins were also diminished after
phosphatase treatment (data
not shown). On the basis of these results
and the results shown
in Fig.
3B and C, we conclude that the C
terminus of Notch4(int-3)
is a site of phosphorylation and is the
domain required for the
Notch4-SEL-10
interaction.
Proteasome inhibitors and a dominant-negative form of hSEL-10
stabilize Notch proteins.
To study whether Notch proteins are
degraded by the ubiquitin/proteasome pathway, cells expressing Notch
proteins were treated with proteasome inhibitors. After treatment,
Western blot analysis was used to measure the changes in the
steady-state levels of these proteins. A protein containing the
C-terminal tail of Notch4(int-3) was expressed poorly in transfected
Bosc23 cells (Fig. 5A, zero-hour time
point), but the levels of this protein were increased after lactacystin
treatment (Fig. 5A), indicating turnover by the proteasome. Notch4(int-3) proteins were expressed well in transfected Bosc23 cells
(Fig. 2A, bottom panel), and the levels of these proteins were not
significantly increased after lactacystin treatment (data not shown).
Thus, the Notch4(int-3) protein was not efficiently processed by the
proteasome, whereas a fragment containing the C-terminal tail of
Notch4(int-3) was. A protein containing the entire intracellular domain
of murine Notch1, N1CHAHis, was stabilized by treatment with another
specific proteasome inhibitor, MG132 (Fig. 5B). Steady-state levels of
several intracellular Notch proteins increased upon treatment with
proteasome inhibitors, indicating that they are targeted for
degradation via the proteasome pathway.

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FIG. 5.
Notch proteins are stabilized by proteasome inhibitor
treatment. (A) Two micrograms of a plasmid expressing
Notch4(int-3)CHAHis was transiently transfected into Bosc23 cells on a
60-mm plate. The cells were treated with 10 µM lactacystin for the
indicated number of hours before harvest. Western blotting using
anti-HA antibody was carried out to assess the steady-state levels of
expression of Notch4(int-3)CHAHis (arrow). (B) A Notch1 fragment
containing the intracellular domain tagged with HA and hexahistidine
was expressed in Bosc23 cells by transient transfection. Cells were
treated with a proteasome inhibitor, MG132, for 12 h before
harvest. Dimethyl sulfoxide (DMSO) was used as a negative control. The
arrow indicates the Notch1 protein revealed by Western blotting using
anti-HA antibody. (C) Proteasome inhibitor treatment leads to a longer
half-life for the Notch protein. Bosc23 cells were transfected to
express Notch4(int-3)CHAHis. Two days after transfection, cells were
pulse-labeled with 35S-labeled methionine and cysteine for
30 min and chased with regular DMEM for up to 2.5 h.
Samples were harvested every 0.5 h and then immunoprecipitated
using anti-HA antibody. The immunoprecipitates were separated by
SDS-PAGE and autoradiographed to reveal the amount of labeled
Notch4(int-3)CHAHis. For cells treated with 10 µM lactacystin, a
proteasome inhibitor was added to both pulse-labeling and pulse-chase
media. Arrows indicate the two bands representing
Notch4(int-3)CHAHis.
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To determine whether the increased steady-state levels of Notch
proteins were due to increased stability, we carried out pulse-chase
analysis to assess the half-life of the N4(int-3)C protein, the
C
terminus of N4(int-3). Transfected cells were pulse-labeled,
cell
extracts were prepared and immunoprecipitated, and the intensities
of
immunoprecipitated protein bands were quantified to compare
the
relative Notch protein levels. Figure
5C shows that in the
absence of
lactacystin, more than half of the N4(int-3)C protein
was turned over
after approximately 1.5 h of chase. In contrast,
after treatment
with 10 µM lactacystin, the amount of Notch4(int-3)C
was diminished
only slightly throughout the 2.5-h chase. Based
on these results, the
increase in Notch4(int-3)C levels after
lactacystin treatment (Fig.
5A)
was likely due to decreased degradation
by the proteasome
pathway.
To determine whether endogenous SEL-10 was required to target Notch
proteins for turnover, we used the dominant-negative form
of SEL-10,
which interferes with endogenous SEL-10 function (SEL-10WDmyc;
Fig.
1B). We tested the ability of SEL-10WDmyc, which expresses
only the
WD40 repeats and not the F-box, to interfere with endogenous
SEL-10
function by coexpressing SEL-10WDmyc with either Notch4(int-3)C
or
N1ICHA in Bosc23 cells. Two days after transfection, cells
were
harvested and the steady-state levels of Notch proteins were
examined
by Western blot analysis. The expression of SEL-10WDmyc
resulted in
increased steady-state levels of N4(int-3)C (Fig.
6A) and of Notch1IC (Fig.
6B). The
increased levels of these proteins
were apparent after equivalent
levels of the plasmids were used
in transfection, and the levels
increased in a dosage-dependent
manner as more SEL-10WDmyc
plasmid was used. The increased expression
of N4(int-3)C upon
coexpression of SEL-10WDmyc was reflected in
increased stability of the
protein after pulse-chase analysis
and quantitation (Fig.
6C). In
contrast, the expression of full-length
SEL-10 did not have a
significant effect on steady-state levels
of Notch1IC (data not shown).
Thus, the WD40 repeat region of
SEL-10 functions as a dominant-negative
form of SEL-10, and the
expression of this form results in decreased
turnover of Notch
proteins. In contrast, expression of the
SEL-10WDmyc plasmid did
not significantly alter the levels of
oncogenic Notch4(int-3)
protein (data not shown). This result
is consistent with the lack
of an appreciable increase in signaling
mediated by Notch4(int-3)
when coexpressed with SEL-10WDmyc
(data not shown).

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FIG. 6.
Expression of the WD40 repeats of SEL-10 stabilizes
Notch proteins. (A) Plasmids expressing Notch4(int-3)CHAHis and
SEL-10WDmyc were cotransfected into Bosc23 cells. The amounts of
plasmids used are indicated at the top of the panel. Two days after
transfection, cells were harvested and subjected to Western blotting.
The steady-state levels of the HA-tagged Notch protein are indicated by
the arrows. (B) SEL-10WDmyc was coexpressed with N1ICHAHis, a Notch1
fragment containing the intracellular domain. Two days later, the
steady-state levels of expression of N1ICHAHis (arrow) were assessed by
Western blotting. (C) Overexpression of the WD40 repeats of SEL-10
results in an increased half-life for Notch4(int-3)CHAHis. A
pulse-chase labeling experiment was done in the absence or presence of
SEL-10WDmyc to determine the half-life of Notch4(int-3)CHAHis.
Metabolically labeled Notch4(int-3)CHAHis (arrows) was visualized by
immunoprecipitation followed by autoradiography.
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SEL-10 mediates Notch protein ubiquitination in vitro.
To
examine whether SEL-10 functions as part of an SCF ubiquitin ligase
that can target Notch proteins for ubiquitin-dependent degradation, we
first tested whether SEL-10myc and SEL-10WDmyc assembled into SCF
complexes. Both proteins were coexpressed in insect cells with hCUL1,
hSKP1, and hHRT1, all components of the SCF complex. SEL-10 protein
complexes were retrieved by immunoprecipitation with anti-myc antibody
beads. Full-length SEL-10 efficiently coprecipitated hCUL1, hSKP1, and
hHRT1, but the WD40 repeat domain by itself was unable to recruit the
other SCF subunits (Fig. 7A); these results provide an explanation for the observed dominant-negative effect of SEL-10WDmyc in transfected cells (Fig. 1C and E and Fig.
6).

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FIG. 7.
SCFSEL-10 mediates Notch ubiquitination in
vitro. (A) Full-length SEL-10 but not the WD40 repeat domain interacts
with other SCF components. Hi5 insect cells were coinfected with a
cocktail of recombinant baculoviruses that expressed hCUL1, hSKP1, and
hHRT1 plus either full-length SEL-10myc or SEL-10WDmyc. Crude lysates
and anti-myc immunoprecipitates prepared from infected cells were
fractionated by SDS-PAGE and evaluated by Western blotting with
anti-myc, anti-CUL1, anti-SKP1, and anti-HRT1 antibodies. (B)
SCFSEL-10 mediates ubiquitination of Notch proteins in
vitro. Bead-bound SCF complexes, prepared as described for panel A,
were incubated with crude lysates of Hi5 insect cells infected with
recombinant baculoviruses that expressed Notch4(int-3)HA,
Notch4(int-3)CHAHis6, and N1ICHAHis6 to allow substrate binding. Beads
were washed three times with lysis buffer and incubated with
six-His-tagged yeast UBA1, hCDC34, and ATP-regenerating system (Rxn).
Ubiquitin (Ub) was either included in or omitted from the reactions.
Following incubation for 60 min at 30°C, the samples were
fractionated by SDS-PAGE, and Notch4 proteins were visualized by
Western blotting with anti-HA antibody. Arrows designate extensively
ubiquitinated forms of Notch proteins. (C) N1ICHAHis6 ubiquitination by
SCFSEL-1 and SCFSEL-10WDmyc. Ubiquitination
reactions were performed as described for panel B, except that
methylubiquitin (Me Ub) was used where indicated to inhibit
multiubiquitin chain formation. Arrows designate multiubiquitinated
forms of Notch proteins. IP, immunoprecipitation.
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|
We next tested whether Notch proteins were ubiquitinated by recombinant
SCF
SEL-10. As shown in Fig.
7B,
high-molecular-weight (HMW) forms of coprecipitated
Notch4(int-3),
Notch4(int-3)CHAHis, and N1ICHAHis proteins were
generated in the
presence of SEL-10myc immunoprecipitates that
contained all subunits of
SCF but not in the presence of SEL-10WDmyc
immunoprecipitates.
Formation of the HMW forms of Notch4 proteins
was dependent on the
presence of ubiquitin, confirming that Notch4
was ubiquitinated in the
presence of SCF
SEL-10. We next examined in more
detail N1ICHAhis ubiquitination in
the presence or absence of ubiquitin
and its chain-terminating
derivative, methyl-ubiquitin. In the presence
of ubiquitin and
SCF
SEL-10, SCF-bound N1ICHAHis
was completely converted into HMW conjugates.
These conjugates migrated
as an apparent band instead of as a
more characteristic smear, because
they were compressed at the
interface of the stacking and running gels.
Substituting ubiquitin
with methyl-ubiquitin dramatically reduced the
apparent size of
ubiquitinated N1ICHAHis, whereas the omission of
ubiquitin from
the reaction completely abolished the formation of HMW
conjugates.
These results confirm that the HMW forms observed were
ubiquitinated
forms of N1ICHAHis. As expected, immunoprecipitates that
contained
full-length SEL-10 but not those that contained SEL-10WD
retained
N1ICHAHis ubiquitination in
vitro.
 |
DISCUSSION |
Although the mechanisms of Notch/LIN-12 signal transmission are
being defined through genetic and biochemical analyses, little is known
about the mechanisms involved in down-regulating the Notch signal.
Notch signaling mediates numerous key developmental decisions in both
vertebrates and invertebrates. As such, mechanisms to down-regulate
Notch signaling are likely critical to maintain proper developmental
programs or to prevent oncogenic functions of Notch proteins.
sel-10 was originally identified genetically in
C. elegans as a negative regulator of
lin-12 activity (10). The fact that the SEL-10
protein is related to the F-box/WD40 repeat family of proteins
suggested that SEL-10 down-regulates Notch/LIN-12 signaling by
targeting these proteins for ubiquitin-mediated protein turnover
(10). This proposed function of SEL-10 would represent a
key mechanism by which Notch signaling is reduced in physiological
settings. Based on the paradigm established by analysis of budding
yeast Cdc4, F-box/WD40 proteins are predicted to bind their target
proteins in a phosphorylation-dependent fashion.
Here, we demonstrate that Notch1 signaling is negatively regulated by
SEL-10. Interference with SEL-10 function by expression of the WD
repeat region enhances steady-state levels of Notch1 proteins by
reducing the rate of turnover, thus increasing Notch1-mediated signaling, indicating that SEL-10 is directly involved in mediating Notch ubiquitination and degradation. We also found the Notch4 proteins
interact efficiently with SEL-10 but that the levels and activity of
the intracellular domain of Notch4, Notch4(int-3), are relatively
resilient to interference with SEL-10 function. Thus, these two Notch
proteins behave differently in response to blocking of SEL-10 function.
The ease with which we could detect Notch4(int-3)-SEL-10 protein
complexes prompted us to choose Notch4(int-3) proteins as a focus for
detailed binding studies. This proved an effective way of dissecting
the biochemical interactions in greater detail than could be achieved
with substrates that would be tremendously labile when complexed to
SEL-10. We demonstrated that the WD40 repeats of SEL-10 bind to the
C-terminal domain of Notch4, a domain important for Notch4
phosphorylation. Moreover, SEL-10 binds preferentially to
phosphorylated forms of Notch4 and shields the phosphate groups from
nonspecific dephosphorylation by CIP, suggesting that the interaction
is directly mediated by phosphorylated amino acids within the
C-terminal domain of Notch4. We also found that several forms of Notch
proteins, Notch1ICD and Notch4(int-3)C, are very unstable as a result
of rapid turnover via the proteasome pathway. However, full-length
SEL-10 expression did not have an appreciable effect on Notch protein
levels or activities (data not shown). This result may indicate that
sufficient SEL-10 activity exists in these cells to mediate Notch
protein turnover.
Finally, recombinant SEL-10 assembles into SCF ubiquitin ligase
complexes in insect cells. These complexes bind coexpressed Notch and
mediate highly processive (and efficient) ubiquitination of bound Notch
proteins. Given that other SCF complexes (including SCFCdc4, SCFGrr1,
SCFSkp2, and SCF
-TRCP)
have been shown to be extremely selective for phosphorylated substrates, we presume that recombinant Notch proteins are targeted to
SCFSEL-10 by an endogenous protein kinase in
insect cells. Although the exact mechanism by which Notch proteins are
targeted for ubiquitination remains unclear, it is evident from the in
vitro experiments that Notch proteins can serve as excellent substrates
for SCFSEL-10. Given the extraordinary substrate
specificity that is evinced by all other SCF ubiquitin ligases that
have been evaluated to date, the efficient and highly processive in
vitro ubiquitination that we observed (Fig. 6C) indicates that Notch is
a physiological substrate for SCFSEL-10. Based on
all of the data, the most parsimonious hypothesis is that the
phosphorylation of Notch by an unidentified protein kinase targets it
to SCFSEL-10, which in turn extensively
ubiquitinates Notch as a prelude to its degradation. Conclusive proof
of this hypothesis in vivo will ultimately require the mapping of
phosphorylation sites and the construction of nonphosphorylatable point
mutant versions of Notch.
We conclude that the C-terminal domain of Notch4 distal to the
CDC10/ankyrin repeats is a negative regulatory domain because it is
responsible for interactions with SEL-10. This notion is consistent
with the fact that the C-terminal domain contains a PEST sequence,
which is characteristic of many short-lived proteins and which is
thought to be a target for phosphorylation and ubiquitination (28). It has also been observed that a C-terminal deletion
can activate GLP-1, a C. elegans Notch protein
(22). The C-terminal domain of Notch proteins is also
where some other regulatory proteins bind. For example,
Drosophila protein Dishevelled has been reported to bind to
this region and may thus mediate the interaction between the Wingless
and Notch signaling pathways (2). Our results predict that
Notch levels and activity may be controlled by a kinase(s) that
phosphorylates the C terminus of Notch proteins. This phosphorylation
would mediate SEL-10 binding and thus ubiquitination and degradation by
the 26S proteasome. Little is known about kinases that phosphorylate
and regulate Notch, but one would predict that the kinase that
phosphorylates the C terminus has a negative regulatory function in
Notch signaling.
An interesting observation is that Notch4(int-3) proteins show strong
and specific interactions with SEL-10 but do not seem to be readily
degraded by the proteasome pathway, in contrast to Notch1IC.
Overexpression of the WD40 repeat region or treatment by lactacystin
failed to increase the steady-state levels of Notch4(int-3) (data not
shown). Pulse-chase analysis indicated that Notch4(int-3) has a much
longer half-life in cells than does Notch4(int-3)C, the C-terminal
domain of Notch4(int-3) (data not shown). However, Notch4(int-3) still
seems to be ubiquitinated in cells because a Western blot of
Notch4(int-3) often displays a very high-molecular-weight smear in
addition to the main Notch4(int-3) signal at the predicted molecular
weight (unpublished observations). This smear can be seen even without
proteasome inhibitor treatment and is very typical of proteins that are
ubiquitinated. Notch4(int-3) also serves as a substrate for
SEL-10-dependent in vitro ubiquitination (Fig. 7A). The fact that
Notch4(int-3) protein levels are relatively unaffected by interference
with SEL-10 activity is consistent with the fact that in signaling
assays, Notch4(int-3) activity was not elevated by coexpression
with a dominant-negative form of SEL-10 (data not shown). One possible
explanation for these observations is that the extracellular sequence,
the transmembrane domain, or the ankyrin repeats in Notch4(int-3) can
function to prevent the protein from being degraded by the proteasome
even after ubiquitination. The resultant increased stability of
Notch4(int-3) may also contribute to the potent oncogenic activity of
this variant of Notch4, whose gene was originally defined as a mammary
oncogene (12, 29). In contrast, our studies show that
Notch4(int-3)C and Notch1IC, both lacking a transmembrane domain and
extracellular sequence, can be readily stabilized by proteasome
inhibitors or overexpression of the WD40 repeat region of SEL-10. This
issue can be further addressed by biochemical studies using a
Notch4(int-3) fragment containing only the intracellular domain or
possibly chimeric proteins of Notch4(int-3) and Notch1IC.
Other reports also suggest that Notch proteins are likely turned over
by ubiquitination. For example, it has been reported that the
steady-state level of the Notch1 intracellular domain can be elevated
by lactacystin, a proteasome inhibitor (32). In addition,
Notchless, a novel Drosophila gene identified as a modulator of Notch activity, encodes a WD40
repeat-containing protein that binds to the intracellular domain of
Notch (31). However, the function of Notchless
is not clear because both loss-of-function mutations and overexpression
of the gene lead to increased Notch activity. These results, once
again, suggest that regulation of the Notch pathway is very complex. A
recent report suggests that Notch proteins are targets for
ubiquitination and provides biochemical evidence that the Itch protein
may participate in mediating Notch ubiquitination
(27). However, this study did not establish that Itch is
responsible for or participates in the ubiquitination of Notch in vivo
or that Notch ubiquitination, stability, or activity is altered in mice
with the Itch mutation.
Ubiquitin-mediated protein degradation is a highly regulated and
selective process used to down-regulate several signaling pathways
(1, 3). F-box/WD40 family proteins can bind to multiple
target proteins (23, 44, 46). We report that Notch signaling also utilizes ubiquitin-mediated protein turnover to down-regulate the Notch/LIN-12 signal. This is evident both in C. elegans (10) and in Notch
signaling in mammalian cells (Fig. 1C and D). Thus, clear evidence from
sequence homology, functional studies, and binding studies points to
the high level of conserved function of SEL-10 as a negative regulator
of Notch signaling from worms to humans. SEL-10 also interacts
genetically and physically with the C. elegans
presenilin, SEL-12 (45), and may target both Notch and
presenilin for degradation. The data presented here suggest that
hSEL-10 may serve a similar role in the down-regulation of presenilin
function as in the down-regulation of Notch. Presenilin is required for
the activation of Notch, probably by mediating the proteolytic cleavage
of the transmembrane domain of Notch, enabling the nuclear access of
the Notch intracellular domain (5, 35, 47). It is not
clear whether SEL-10 has effects on the presenilin-Notch interaction or
whether it targets each protein separately. It will be interesting to
define how SEL-10 is directed to distinct targets, such as Notch and
presenilins. Understanding how Notch proteins are regulated by SEL-10
may also provide new approaches to controlling Notch activity. For
example, as constitutive activation of Notch can lead to tumorigenesis, SEL-10 activity could be used to reverse Notch activity in these circumstances.
 |
ACKNOWLEDGMENTS |
We are grateful to Yuko Takayasu, Liz Munoz, and Khaled Zeitoun
for technical assistance. We thank Iva Greenwald, Martin Julius, and
Richard Kessin for comments on the manuscript. We also thank G. Weinmaster, R. Kopan, P. Sorger, P. Jackson, and Y. Xiong for generously providing Jagged1 and Notch1 plasmids, Notch1
E plasmid, hSKP1 baculovirus, and anti-hSKP1 and anti-HRT1 antibodies, respectively.
This work was supported by grants to J.K. from the NIH (RO1 HL62454 and
RO1 CA75353) and the Marilyn Bokemeier Sperry Fund, by a grant to
R.J.D. from the NIH (GM52466), and by a Burroughs-Wellcome Young
Investigator in the Pharmacological Sciences award given to
R.J.D. G.W. was supported by a predoctoral fellowship from the
Department of Defense Breast Cancer Research program
(DAMD17-97-1-7291), and I.D. was supported by an NIH training grant
(2T32 DK07328).
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Departments of
Pathology and Obstetrics and Gynecology, Columbia University, 630 West 168 St., New York, NY 10032. Phone: (212) 305-3624. Fax: (212) 305-3624. E-mail: jkk9{at}columbia.edu.
 |
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Molecular and Cellular Biology, November 2001, p. 7403-7415, Vol. 21, No. 21
0270-7306/01/$04.00+0 DOI: 10.1128/MCB.21.21.7403-7415.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
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