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Molecular and Cellular Biology, February 2001, p. 1297-1310, Vol. 21, No. 4
0270-7306/01/$04.00+0 DOI: 10.1128/MCB.21.4.1297-1310.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Regulation of p53 by Hypoxia: Dissociation of
Transcriptional Repression and Apoptosis from
p53-Dependent Transactivation
Constantinos
Koumenis,1,
Rodolfo
Alarcon,1
Ester
Hammond,1
Patrick
Sutphin,1
William
Hoffman,2
Maureen
Murphy,2
Jennifer
Derr,1
Yoichi
Taya,3
Scott W.
Lowe,4
Michael
Kastan,5 and
Amato
Giaccia1,*
Division of Radiation and Cancer Biology, Department of
Radiation Oncology, Stanford University School of Medicine,
Stanford, California 943051;
Department of Pharmacology, Fox Chase Cancer Center,
Philadelphia, Pennsylvania 191112;
National Cancer Center Research Institute, Chuo-ku, Tokyo
104, Japan3; Cold Spring Harbor
Laboratory, Cold Spring Harbor, New York
1172414; and Department of
Hematology-Oncology, St. Jude Children's Research Hospital,
Memphis, Tennessee 081055
Received 14 September 2000/Returned for modification 20 September
2000/Accepted 10 November 2000
 |
ABSTRACT |
Hypoxic stress, like DNA damage, induces p53 protein accumulation
and p53-dependent apoptosis in oncogenically transformed cells.
Unlike DNA damage, hypoxia does not induce p53-dependent cell cycle
arrest, suggesting that p53 activity is differentially regulated by these two stresses. Here we report that hypoxia induces p53 protein accumulation, but in contrast to DNA damage, hypoxia fails
to induce endogenous downstream p53 effector mRNAs and proteins. Hypoxia does not inhibit the induction of p53 target genes by ionizing
radiation, indicating that p53-dependent transactivation requires a DNA
damage-inducible signal that is lacking under hypoxic treatment alone.
At the molecular level, DNA damage induces the interaction of p53 with
the transcriptional activator p300 as well as with the transcriptional
corepressor mSin3A. In contrast, hypoxia primarily induces an
interaction of p53 with mSin3A, but not with p300. Pretreatment of
cells with an inhibitor of histone deacetylases that relieves
transcriptional repression resulted in a significant reduction of
p53-dependent transrepression and hypoxia-induced apoptosis.
These results led us to propose a model in which different cellular
pools of p53 can modulate transcriptional activity through interactions
with transcriptional coactivators or corepressors. Genotoxic stress
induces both kinds of interactions, whereas stresses that lack a DNA
damage component as exemplified by hypoxia primarily induce interaction
with corepressors. However, inhibition of either type of interaction
can result in diminished apoptotic activity.
 |
INTRODUCTION |
The critical role of p53 in tumor
suppression is underscored by the findings that the p53 gene is mutated
in over 50% of human cancers (17) and that mice
nullizigous for the p53 gene develop tumors early in their lifetime
(10). Two functions of p53 that have been proposed to be
responsible for its role as a tumor suppressor are the induction of
cell cycle arrest in response to DNA damage and the induction of
apoptosis. Following DNA damage, p53 binds to DNA in a
sequence-dependent manner, and through interactions with the
transcriptional coactivator p300 (also called CBP) (4, 27)
as well as basal transcription factors like TFIID (13), it
induces the transcription of downstream effector genes whose products
interact with and inhibit proteins involved in cell-cycle regulation
(for a review, see 26).
The molecular events that lead to p53-dependent apoptosis are less
clear. p53-dependent transactivation has been reported to induce
apoptosis in some experimental systems (9, 53, 55).
However, under other conditions it appears that macromolecular synthesis is completely dispensable for the induction of p53-dependent apoptosis (7, 51). Furthermore, expression of p53 mutants that lack transactivation capability is able to induce apoptosis in
certain cell lines (9, 21, 40), and deletion of the polyproline-rich domain of p53 which is located between the
transactivation and DNA binding domains of p53 abrogates the apoptotic
properties of p53 but does not affect DNA binding, bax
induction, or cell cycle inhibition (43). There is also
increasing evidence that p53-dependent transrepression may also
contribute to the induction of apoptosis (35, 36, 39, 41,
50). In addition, the interaction of p53 with two proteins, XPB
and XPD, that are components of the basal transcription factor TFIIH,
has been suggested to be essential for UV-induced apoptosis of human
fibroblasts (52). The consensus from the above findings is
that different mechanisms of p53-mediated apoptosis may exist which may
function coordinately or independently in different experimental
systems depending on factors such as cell type, type of stress, levels
of p53, and oncogenic activity.
Accumulation of the p53 protein following genotoxic stress involves
posttranscriptional mechanisms such as enhanced translation of p53 mRNA
and decreased proteolytic degradation of the protein (26, 28,
33). Activation of p53 following genotoxic damage is achieved by
induction of p53 levels and by modifications of the p53 protein such as
phosphorylation and acetylation (reviewed in references 14 and
38). Phosphorylation of serines 15 and 20 following genotoxic
stress (8, 29, 44-46, 48) has been shown to impair
interaction between p53 and Mdm-2, resulting in enhanced p53
accumulation (38, 44, 48), suggesting another means of
modulating p53-dependent apoptosis. p53 is also extensively phosphorylated at other sites in vitro and in vivo in response to
genotoxic damage (reviewed in references 14, 29, and 38). Although some of these posttranslational modifications increase the sequence-specific DNA binding activity of p53 and its
transactivation properties in vitro, the physiological significance of
these modifications in vivo remains to be determined.
Tumor hypoxia develops in most solid tumors as a result of inefficient
vascular development, or abnormal vascular architecture (6). Previous studies have demonstrated that hypoxia is an independent prognostic factor of survival independent of other factors,
including tumor grade or treatment modality (surgery or radiotherapy)
(22). In contrast to DNA damage, hypoxia is a
physiological inducer of the p53 tumor suppressor gene product (15) and can act as a selective pressure during tumor
growth for the elimination of cells with wild-type (wt) p53 and the
clonal expansion of cells with mutant or otherwise inactive p53 protein (16). This observation provides a possible explanation for
the more aggressive nature of hypoxic tumors compared to
well-oxygenated ones and for the frequent occurrence of p53 mutations
in advanced stages of tumor development.
Little is known about the regulation of p53 function in
oxygen-deprived cells and the role of known endogenous downstream effectors of p53 in this process. In this study we present evidence indicating that similar to genotoxic damage, hypoxia induces p53 protein accumulation and apoptosis. Unlike DNA damage, hypoxia fails to
enhance the transactivation properties of p53. However, hypoxia does
induce p53 transrepression activity, and inhibition of this activity
significantly decreases p53-dependent apoptosis under hypoxic conditions.
 |
MATERIALS AND METHODS |
Cell lines.
Human breast carcinoma MCF-7, human colorectal
carcinoma RKO, Epstein-Barr virus-transformed human lymphocytes
GM2184B, and HT1299 cell lines were obtained from the American
Type Culture Collection (Manassas, Va.). p53+/+ and
p53-null mouse embryonic fibroblasts (MEFs) transformed with E1A and ras (15) were a gift from
Scott Lowe (Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.).
Hypoxic treatments.
Treatment of cells with hypoxia was
performed either in a hypoxic chamber (<0.2% O2) (Sheldon
Corp., Cornelius, Oreg.) or in specially designed aluminum chambers for
dose-response experiments (2 to 0.02% O2) and for
experiments in which cells were irradiated under hypoxia.
Determination of apoptotic cells.
Cells with apoptotic
morphology were identified by staining with Hoechst dye 33342 (blue) (5 µg/ml) for changes in nuclear characteristics and with propidium
iodide (pink) (5 µg/ml) for loss of membrane integrity. Apoptotic
values were calculated as the percentage of apoptotic cells relative to
the total number of cells in each field (>100 cells) and represent the
average of four randomly selected fields per 60-mm-diameter dish.
Immunoblotting and immunoprecipitation.
Primary antibodies
used for immunoblotting were DO-1 mouse monoclonal for human p53, M-19
rabbit polyclonal for human p21, and SMP14 mouse monoclonal for human
Mdm-2 (Santa Cruz Biotechnology, Santa Cruz, Calif.). The anti-mSin3A
(K-20) and anti-p300 (N-15) rabbit polyclonal antibodies used for
coimmunoprecipitations of p53 protein were purchased from Santa Cruz
Biotechnology. For immunoprecipitation and immunoblotting, cell
extracts were prepared by lysing 107 to 108
cells in buffer A, which contained 10 mM Tris (pH. 7.5), 1 mM EDTA, 400 mM NaCl, 10% glycerol, 0.5% NP-40, 5 mM NaF, 0.5 M
Na3VO5, 1 mM dithiothreitol (DTT), and 1 mM
phenylmethylsulfonyl fluoride (PMSF). Lysates were incubated on ice for
10 min and then centrifuged at 6,000 × g to remove
cellular debris. Forty to fifty micrograms of protein was used for
Western transfer and immunoblotting. For immunoprecipitations cell
lysates (2 to 4 mg) were mixed with an equal volume of TEG buffer,
which contained 10 mM Tris (pH 7.5), 1 mM EDTA, 20% glycerol, 5 mM NaF, 0.5 mM Na3VO5, 1 mM DTT, 1 mM
phenylmethylsulfonyl fluoride (PMSF), and 3 µg of polyclonal antibody
1801 and rocked at 4°C overnight. Antibody-protein complexes were
captured by addition of 40 µl of protein A-G-Plus beads (Santa Cruz
Biotechnology) for 2 h. Immunoprecipitates were washed three times
with buffer B, which contained 0.5 M Tris (pH 7.9), 250 mM KCl, 0.3%
NP-40, 0.1% Triton X-100, 0.01% sodium dodecyl sulfate, and 1 mM DTT;
resuspended in 3X SDS gel loading buffer, and analyzed on 9%
polyacrylamide gels.
Immunofluorescent staining.
Immunofluorescent staining of
RKO cells was performed as described by Graeber et al.
(15). Cells were placed on Lab-Tek slides (Nunc,
Naperville, Ill.), treated, and then fixed for 5 min with methanol
previously stored at
20°C. After fixation, the slides were
incubated for 20 min with 10% goat serum in phosphate-buffered saline (PBS). The slides were washed with PBS and then incubated with mouse anti-53 antibody (DO-1 at 1 µg/ml) for 60 min. After another wash, the slides were incubated in fluorescein
isothiocyanate-conjugated goat anti-mouse immunoglobulin (secondary)
antibody (20 µg/ml; Caltag, South San Francisco, Calif.) for 60 min
before a final wash. Coverslips were then mounted onto the slides, and
the slides were photographed at a X600 magnification. As controls,
slides that were stained with secondary antibody alone showed no
significant fluorescence. All incubations were done at room temperature.
RNA isolation, Northern hybridization, and RPA.
Total RNA
was isolated from 106 to 107 cells grown in
monolayers using a modified guanidine isothiocyanate protocol (Trizol reagent; Gibco Life Sciences) according to the manufacturer's protocol. Northern hybridization assays were performed using 20 µg of
total RNA. Radiolabeled probes to human and mouse
-tubulin,
-tubulin, and 18S RNA were synthesized with a random priming kit
(Gibco BRL) from DNA fragments obtained by PCR amplification of mouse
or human cDNA and gel purification of the DNA product. Ribonuclease
protection assay (RPA) was performed with 10 µg of total RNA by using
the RiboQuant kit and the human Stress-1 multiprobe template set
(Pharmingen, San Diego, Calif.). Protected RNA-RNA hybrids were
resolved on a 5% denaturing polyacrylamide gel and subjected to
autoradiography. Quantitation was performed on a PhosphorImager
(Molecular Dynamics, Sunnyvale, Calif.).
Comet assay.
The comet assay was performed with RKO
cells using a CometAssay kit (Trevigen, Gaithersburg, Md.)
according to the manufacturer's instructions. Briefly, at the end of
the treatment, cells were placed on ice, washed three times in ice-cold
PBS, and counted. Approximately 250,000 cells were mixed with
low-melting-point agarose (1%, wt/vol) and were placed on specially
treated coverslips. Cells were lysed in a solution (2.5 M NaCl, 100 mM
EDTA [pH 10], 10 mM Tris base, 1% sodium lauryl sarcosinate, 1%
Triton X-100) for 30 min. Following cell lysis, the slides were placed
in alkali buffer (NaOH, pH > 13) for 60 min, rinsed in
Tris-borate-EDTA (TBE) buffer, and electrophoresed in 1× TBE buffer at
25 V for 20 min. The agarose was dehydrated by immersing it in 100%
ethanol for 10 min and air dried. The DNA was visualized using
SYBR-green dissolved in antifade solution and comets were analyzed on
an epifluorescence microscope by capturing images with a charge-coupled device-cooled camera and analyzing individual comets with the Comet
Analysis System (Loats Associates, Westminster, Md). Tail moment
(percentage of DNA in the tail × length of migration) was automatically calculated after background correction for 75 comets in
each experimental group. Results are reported as absolute tail moment
measurement ± standard error of the mean (SEM).
 |
RESULTS |
Hypoxia induces p53 accumulation without increasing p21 protein
levels.
Activation of p53 protein by DNA damage is followed by
increased synthesis of downstream effector proteins. The product of the
p21-WAF-1-cip-1 gene (hereafter referred to as p21) exhibits the most
consistent upregulation by p53 in response to DNA damage among various
in vitro and in vivo systems (11, 37). Although hypoxia
has been previously shown to induce p53 accumulation, it is not known
whether p53 accumulation is followed by upregulation of p21 levels. To
address this question we investigated the oxygen dependency of p53 and
p21 accumulation in the wt p53 cell line RKO, which exhibits a
p53-dependent upregulation of p21 after infrared (IR) treatment.
Lowering oxygen levels from 20% to 0.02% by serial evacuations
increased p53 protein levels (Fig. 1A). This increase was evident at O2 concentrations of 0.2%.
However, none of the decreased oxygen levels resulted in increased p21 protein levels. In the human lymphocyte cell line GM2184, both IR
treatment and hypoxia caused an increase in p53 levels of
comparable magnitudes (Fig. 1B). However, while IR treatment of
cells increased p21 levels, hypoxia decreased p21 levels. The same
difference in the regulation of p21 levels by IR treatment and hypoxia
was found in RKO and MCF-7 cells (Fig. 1C and D). Again, IR but not hypoxia increased p21 levels. These results demonstrate that the inability of hypoxia-induced p53 to induce p21 accumulation is not cell
line specific but occurs in cell lines of different lineage.

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FIG. 1.
Hypoxia induces p53 accumulation but uncouples it from
p21 accumulation. (A) Western blot analysis of p53 and p21 levels from
RKO exposed to different levels of hypoxia for 6 h or following
5 h of reoxygenation after hypoxia treatment. (B) Western blot
analysis of p53 and p21 protein levels in GM2184B lymphoblasts with wt
p53 following treatment with 6 Gy of IR or hypoxia for the indicated
times. Also shown are western blot analyses of p21 levels in RKO cells
(C) and in MCF-7 cells (D) after treatment with 6 Gy of IR or with
hypoxia for the indicated times.
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Hypoxia downregulates Mdm-2 protein levels.
Another important
p53-regulated effector is the product of the Mdm-2 oncogene. This
transcriptional target of p53 participates in an autoregulatory
feedback loop that regulates p53 levels by binding to the N terminus of
p53, inhibiting its transactivation properties, and promoting its
proteolytic degradation (20, 25, 33). In cells treated
with hypoxia, Mdm-2 levels were markedly repressed at 4 h and
remained repressed up to 26 h under hypoxia, while IR treatment
induced a substantial increase in Mdm-2 levels (Fig.
2A). The decrease in Mdm-2 levels was not
accompanied by a decrease in Mdm-2 mRNA levels (Fig. 2B), indicating
that the decrease in Mdm-2 levels by hypoxia is due to a
posttranscriptional mechanism. This decrease in Mdm-2 protein levels
observed under hypoxia also suggests a likely mechanism for the
increased accumulation of p53 by hypoxia (see Discussion).

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FIG. 2.
IR but not hypoxia induces Mdm-2 protein and mRNA
accumulation. (A) Time course of the regulation of Mdm-2 levels in cell
extracts prepared at the indicated times under hypoxia or 3 h following
treatment with 6 Gy of IR. (B) Northern blot analysis of Mdm-2 mRNA
levels following treatment with hypoxia or 6 Gy of IR. Hybridization to
18S rRNA was used as a loading control (Con).
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p53 induced by hypoxia fails to induce transactivation of
endogenous downstream effectors.
Since hypoxia failed to increase
p21 protein levels following p53 induction, we examined the ability of
hypoxia-induced p53 to upregulate transcription of downstream effector
genes. To address this question, we assayed for the levels of various
mRNAs of known downstream p53 effectors after hypoxia or IR treatments.
Such effectors include the cyclin-cdk inhibitor p21, the proapoptotic protein Bax, and the product of the growth arrest and DNA
damage-inducible gene GADD-45. These effector genes have
p53-responsive elements in their promoter regions and are induced in a
p53-dependent manner following treatment with IR in a wide variety of
cell lines and tissues (11, 23, 30, 31). To assay the
levels of these products, we employed a multiribonuclease assay that
allows the simultaneous detection of these mRNAs as well as the mRNA
levels of housekeeping genes as an internal control in a single reaction.
wt p53 MCF-7 cells were irradiated or exposed for different durations
to hypoxia before protein and total RNA extraction.
Induction of p53
occurred 8 h following hypoxia and reached levels
comparable to
those obtained 3 h after treatment with IR (Fig.
3A). However,
hypoxia-induced p53 failed to increase the mRNA
levels of the p21,
GADD-45, or Bax genes (Fig.
3B). From the mRNAs
assayed in this set,
only the mRNA of the c-fos proto-oncogene
increased under hypoxia,
confirming previous observations that
hypoxia is an inducer of this
immediate-early gene (
34). No
change in p53 mRNA levels
was observed under hypoxia, indicating
that as with IR, accumulation of
p53 protein by hypoxia is due
to posttranscriptional mechanisms. These
results indicate that
hypoxia does not induce the transactivation of
the same endogenous
downstream effectors of p53 that DNA damage
induces. Similar results
were obtained in normal cervical epithelial
cells, indicating
that the lack of transactivation by hypoxia-induced
p53 is not
restricted to the transformed cell phenotype (Denko et al.,
unpublished
results).

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FIG. 3.
Hypoxia-induced p53 fails to transactivate endogenous
effector gene mRNAs. MCF-7 cells were treated with hypoxia or with 6 Gy
of IR, and at the times indicated whole-cell lysates and total RNA was
prepared. (A) Western blot analysis of p53 levels following treatment
of MCF-7 cells. (B) Multi-RPAs of mRNA levels of various p53 effectors and other genes involved in cellular stress and
apoptotic responses. RPAs were performed in MCF-7 cells using RNA
probes synthesized from a set containing various stress-induced genes
(hStress set). Probes that are complementary to two housekeeping genes
(ribosomal protein L32 and GAPDH) serve as normalization controls
(Con).
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A DNA damage-inducible signal activates p53 transactivation under
hypoxia.
The lack of significant transactivation by
hypoxia-inducible p53 could be explained by the following hypotheses:
(i) hypoxia downregulates or inhibits the interaction of p53 with an
accessory factor required for p53 transactivation, (ii) hypoxia-induced p53 or an accessory factor lacks a modification which is present in DNA
damage-induced cells and which is necessary for transactivation, or
(iii) both i and ii. To distinguish between these possibilities, we
examined the transactivation properties of p53 in MCF-7 and RKO cells
treated with IR or hypoxia or treated with IR while exposed to hypoxia.
In MCF-7 cells, IR caused a significant dose-dependent induction of
GADD-45, p21, and Bax mRNA levels (Fig.
4). Note that based on the levels of L32
and glyceraldehyde-3-phosphate dehydrogenase (GAPDH) mRNAs, lane 2 is
underloaded compared to control (lane 1) and the other lanes, by a
factor of 2.2 Treatment with hypoxia for 9 h failed to increase
GADD-45 or Bax levels, and increased p21 levels only 2- to 3-fold
compared to 6- to 10-fold induction by 10 Gy of IR. However, in cells
treated with IR while under hypoxia, a substantial increase in the
levels of these same mRNAs was observed. Similar results to those found
with MCF-7 cells were obtained in RKO cells, although the increases in
p21 and Bax mRNA levels after combined hypoxia and IR treatments were less pronounced than those observed in MCF-7 cells (Fig. 4). This result suggests that hypoxia induces the accumulation of
transcriptionally latent p53 that upon DNA damage becomes
transcriptionally active. These results support the hypothesis that
lack of p53-dependent transactivation is due not to a dominant,
hypoxia-repressible event but rather to a lack of modification(s) of
p53 and/or of accessory protein(s), which is induced by DNA damage.

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FIG. 4.
Irradiation of MCF7 and RKO cells under hypoxia induces
p53-dependent transactivation. Cells were grown in normoxic conditions
(lanes 1 to 3, MCF-7, and lanes 1, 2, and 5, RKO) or exposed to hypoxia
(lanes 4 to 6, MCF-7, and lanes 3 and 4, RKO). Cells in lanes 2, 3, 5, and 6 (MCF-7) and lanes 2 and 4 (RKO) received 3 or 10 Gy of IR, as
indicated, 3 h before cell lysis. Cells in lane 5 (RKO) were
treated with 20 µM ALLN for 3 h before cell lysis. Following
cell lysis, total RNA was isolated and RPAs were performed as described
in Materials and Methods.
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Hypoxia induces nuclear accumulation of p53.
One mechanism
that could explain the lack of p53-dependent transactivation of
endogenous effector gene products under hypoxia is the nuclear
exclusion of hypoxia-induced p53. This possibility is even more likely
since the recent report by Ashcroft et al. (3) that p53
stabilized by hypoxia-mimicking agents like deferoxamine (DFO) was
excluded from the nucleus. Although it was previously shown that
hypoxia induced nuclear accumulation of p53 in untransformed human
fibroblasts (15), it is still possible that in transformed cell lines like RKO, nuclear accumulation or transport of
hypoxia-induced p53 is compromised. To address this question, we
exposed RKO cells to hypoxia and subjected them to immunocytochemistry
using the DO-1 monoclonal antibody. Under normoxia, a very low level of p53 immunoreactivity was present in these cells (Fig.
5d). After 12 h of hypoxia, a strong
p53 signal that localized to the cell nuclei was evident (Fig. 5 f
and h). These results indicate that as was the case in untransformed
human fibroblasts, hypoxia-induced p53 accumulates in the nuclei of
transformed cells and suggest that the mechanism of induction of p53
levels by DFO and physiological hypoxia are different.

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FIG. 5.
Hypoxia-induced p53 is mainly localized to the nucleus.
RKO cells were grown under normoxia (a to d), or exposed to hypoxia (e
to h). Nuclei were visualized with DAPI
(4',6'-diamidino-2-phenylindole) counterstaining (a, c, e, and g),
while p53 was visualized using the DO-1 monoclonal antibody and a
fluorescein-conjugated mouse secondary antibody (d, f, and h). Panel b
depicts fluorescence due to binding of the secondary antibody alone.
Images in panels g and h were taken using a higher magnification
objective (×60) than the other panels (×20).
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Hypoxia induces p53-dependent transrepression.
While p53 has
been demonstrated to act as a transcriptional activator in response to
DNA damage, it can also repress transcription of several downstream
genes (1, 35-37, 41). Therefore, we examined the effect
of hypoxia on the regulation of expression of genes that have been
shown to be repressed in a p53-dependent manner. The mRNA for
-tubulin is repressed by p53 (35). To investigate
whether the repression of
-tubulin is p53 dependent, we examined the
effects of hypoxia on expression of
-tubulin mRNA in the p53-null
cell line H1299, which was stably transfected with a p53-inducible gene
construct under the control of a tetracycline-regulated promoter (Fig.
6A). A relatively low dose of doxycycline
(200 ng/ml) was used to moderately induce p53 in these experiments. Under these conditions, we have found that p53 protein levels increase
without any substantial induction of apoptosis compared to uninduced
cells (data not shown). When H1299 cells were exposed to hypoxia in the
presence of doxycycline, the levels of
-tubulin mRNA decreased to
38% of control levels. This decrease was p53 dependent, as in the
absence of the p53-inducible gene hypoxia and doxycycline caused only a
6% decrease (Fig. 6B).

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FIG. 6.
Hypoxia induces p53-dependent transrepression. (A)
Doxycycline (200 ng/ml) induces p53 expression in H1299 cells
transfected with a tet-inducible construct (clone 30) under
normoxic and hypoxic conditions. The slight increase in p53 levels
under hypoxia in the absence of doxycycline is probably due to
stabilization of residual p53 expressed due to the "leakiness" of
the construct. (B) Northern analysis of -tubulin ( -tubul.) mRNA
levels in an H1299 clone expressing a tet-inducible p53
construct and the parental clone transfected with empty vector. Cells
were treated with hypoxia, doxycycline, or doxycycline for 2 h
followed by treatment with hypoxia. In this cell line, hybridization
with the -tubulin probe results in two signals, probably because of
alternative splicing of the -tubulin. At the bottom, a methylene
blue-stained nitrocellulose membrane, indicating levels of 18S and 28S
RNA is shown. (C) Northern blot analysis of the p53-transrepressed gene
coding for -tubulin after treatment of p53+/+ and
p53 / MEFs with hypoxia or with 10 J of UV
radiation/m2. Hybridization to 18S rRNA was used as a
control. This is a light PhosphorImager scan that better represents the
repression levels of -tubulin. Values represent relative -tubulin
levels.
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Another gene whose expression is repressed in a p53-dependent manner is

-tubulin. mRNA levels of this gene decrease in response
to p53
induction that leads to growth arrest (
36), or to
apoptosis
(
37). We assayed for changes in

-tubulin mRNA
levels in p53
+/+ and p53
/
MEFs after
treatment with hypoxia and UV. Hypoxia decreased

-tubulin
mRNA
levels to 22 and 25% of control levels after 8 and 16 h of
treatment in the p53
+/+ MEFs (Fig.
6C). UV treatment also
caused a significant decrease
in

-tubulin levels. In
p53
/
cells, however,

-tubulin mRNA levels decreased
only slightly
in response to hypoxia (85% at 6 h and 96% at
12 h) and moderately
in response to UV (67% at 3 h and 58%
at 6 h). These results indicate
that while p53-dependent
transactivation is absent in cells exposed
to hypoxia, p53
transrepression is still
present.
Hypoxia fails to induce acetylation of Lys382 but induces
phosphorylation of Ser15.
Activation of p53-dependent
transcriptional activity by DNA-damaging agents has been associated
with specific posttranscriptional modifications of the protein. The
transcriptional coactivator p300 has been shown to interact with p53
and induce acetylation of its C terminus, at Lys320 and Lys382
(18, 42). Furthermore, acetylation of p53 is proposed to
unmask the DNA binding domain of p53 and to increase its
transactivation ability. We investigated the effects of hypoxia and IR
on p53 acetylation using a rabbit polyclonal antibody that recognizes
p53 acetylated at Lys382. RKO cells treated with hypoxia, IR, and the
proteasome inhibitor ALLN were lysed, and extracts were subjected to
immunoblotting using this antibody. ALLN induces accumulation of p53
protein by inhibiting its proteolytic degradation and does not induce p53-dependent transactivation (Fig. 4). As seen in Fig.
7A, only IR caused a significant increase
in p53 protein acetylation, while 10 or 20 h of hypoxia did not
result in an increase in p53 acetylation at this site. ALLN also failed
to induce this modification.

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FIG. 7.
Differences in p53 modifications induced by IR and
hypoxia. (A) IR but not hypoxia induces acetylation of Lys382. RKO
cells were treated with hypoxia, 6 Gy of IR, or 20 µM ALLN for the
times indicated. Immunoblotting was performed with a rabbit polyclonal
antibody raised against Lys382. (B) Both IR and hypoxia induce Ser15
phosphorylation of p53. Treatment times are indicated. The top panel
shows an immunoblot using a rabbit polyclonal that recognizes p53
phosphorylated at Ser15. The bottom panel shows the same immunoblot
after being stripped and reprobed with the DO-1 monoclonal antibody.
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In contrast, hypoxia exhibited an ability similar to that of IR in
stimulating phosphorylation of Ser15 (Fig.
7B). Human p53
is
phosphorylated on at least two sites near the N terminus in
response to
DNA damage: at Ser15 and Ser20 (
8,
29,
45,
46,
48).
Phosphorylation on Ser15 has been shown to decrease
the affinity of
Mdm-2 for binding at the N terminus of the protein
(
44).
Treatment of RKO cells with hypoxia for 20 h induced robust
phosphorylation on Ser15 as determined by immunoblotting with
a
polyclonal antibody specific for phosphorylated Ser15. IR also
caused
Ser15 phosphorylation 3 h after treatment, while treatment
with ALLN, a
calpain I inhibitor that induces p53 accumulation
by decreasing its
proteolytic degradation (
46), did not result
in Ser15
phosphorylation. When the same immunoblot was stripped
and reprobed
with the DO-1 monoclonal antibody that recognizes
wt p53 protein, a
significant induction of p53 protein levels
was observed in cells
treated with ALLN, IR, and hypoxia, compared
to untreated control
cells. The phosphorylation of p53 on Ser15
was induced as early as
4 h of hypoxia and was present at comparable
levels after 20 h of
continuous exposure to hypoxia (Koumenis
et al., unpublished
observations). Therefore, phosphorylation
of p53 on Ser15 is similar
for both DNA damage and
hypoxia.
Hypoxia fails to induce a p53-p300 interaction but promotes a
strong interaction between p53 and the corepressor mSin3A.
The
lack of p53-dependent transactivation and acetylation of p53 on Lys382
and the induction of p53-dependent transrepression by p53 under hypoxia
suggest that hypoxia must influence the interaction of p53 with
transcriptional accessory proteins in a unique manner. To further
elucidate the mechanism of selective regulation of p53 function by
hypoxia, we examined the interactions between p53 and transcriptional
coactivators and corepressors. The transcriptional coactivator p300 has
been shown to interact with a number of transcriptional activators and
enhancers, including p53, and its function has been demonstrated to be
indispensable for p53-dependent transactivation (4, 18, 27,
42). The transcriptional corepressor mSin3A, a member of the
NCoR transcriptional repressor complex, is utilized by transcriptional
repressors like the Mad-Max complex and nuclear hormone receptors and
has recently been shown to interact strongly with p53
(36). mSin3A also interacts with histone deacetylases (HDACs), which promote deacetylation of core histones at the promoter region and induce transcriptional repression of specific genes (19).
The interaction between p53 and p300 or p53 and mSin3A was examined in
RKO cells treated with hypoxia, ALLN, or IR. Accumulation
of p53
protein was strongly induced in these cells by hypoxia,
ALLN, and IR in
a dose-dependent manner (Fig.
8A). In
extracts
immunoprecipitated with an anti-p300 polyclonal antibody, p53
was present only in cells treated with IR, with maximal levels
occurring at 8 h post-IR treatment. In contrast, in
immunoprecipitates
using an anti-mSin3A antibody, p53 was detected in
cells treated
with both hypoxia and IR and to a lesser extent in cells
treated
with ALLN. The strong interaction between p53 and mSin3A under
hypoxic conditions was time dependent and followed kinetics similar
to
those of p53 induction. More significantly, higher levels of
p53 were
coimmunoprecipitated with mSin3A after 20 h of hypoxia
compared to
the levels following treatment with ALLN, suggesting
that hypoxia
induces a stress-specific modification that leads
to a strong
interaction between p53 and mSin3A. No change in the
levels of p300 or
mSin3A was observed following treatments with
hypoxia (Koumenis et al.,
unpublished data).

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FIG. 8.
Interactions of p53, p300, and mSin3A after hypoxia and
ionizing radiation exposure. (A) Immunoprecipitation of mSin3a or p300
was performed on extracts from cells treated with 3 Gy of IR (top) or
hypoxia-ALLN (bottom) using polyclonal antibodies against the
corresponding proteins. One-tenth of the cell extract was loaded in a
lane of each set to assay for p53 levels. The blot was probed with the
DO-1 anti-p53 monoclonal antibody. (B) Immunoblot on cell lysate (top)
and immunoprecipitation (IP) followed by immunoblotting (bottom) of p53
levels in extracts of cells treated with doxorubicin (100 ng/ml) for
12 h, hypoxia for 12 and 24 h, or both doxorubicin (12 h) and
hypoxia (24 h). In the third case, doxorubicin was added during the
last 12 h of hypoxia. The same anti-p300 polyclonal antibody
(N-15) that was used in the top panel of B was used here. The table at
the bottom of the figure indicates the tail moment values from cells
treated as described above as determined by the Comet assay. Values are
averages of 75 cells per treatment group and are reported along with
SEMs for each group.
|
|
Since DNA damage is able to induce transactivation by
hypoxia-inducible, transcriptionally latent p53, we hypothesized that
DNA damage should be able to induce an interaction between
hypoxia-induced
p53 and p300. We treated RKO cells with doxorubicin,
hypoxia,
or a combination of both treatments (Fig.
8B). Doxorubicin was
used as the DNA-damaging agent because we found that it induces
higher
levels of p53 accumulation and a stronger interaction between
p53 and
p300. Both doxorubicin and hypoxia induced p53 accumulation.
The
combination of the two treatments induced p53 accumulation
that was no
greater than the induction found by doxorubicin or
hypoxia alone. When
lysates were immunoprecipitated with an anti-p300
antibody, p53 was
present in the extracts treated with doxorubicin
but not with hypoxia.
However, in cells treated with both doxorubicin
and hypoxia, the
anti-p300 antibody was able to coimmunoprecipitate
p53, indicating that
DNA damage induced an interaction between
p53 and p300 even under
hypoxia. The lower levels of p53 in this
lane compared to those in
extracts treated with doxorubicin alone
may reflect the difference in
DNA damage induced by doxorubicin
under oxic versus hypoxic conditions
as detected by the comet
assay (Fig.
8B). This assay measures DNA
damage in the genome
through an increase in the electrophoretic
mobility of nuclear
DNA in an electrofield (
12). The
increase in DNA mobility (seen
as migrating DNA comet) is a direct
measure of the extent of total
DNA damage (single- and double-strand
breaks). Hypoxia itself
did not induce any measurable DNA damage and
reduced the net damage
induced by doxorubicin after a 12-h
exposure.
The histone deacetylase inhibitor TSA reduces hypoxia-induced
apoptosis and p53-dependent transrepression.
The p53-mSin3A
interaction under hypoxia suggests that transcriptional repression
mediated by this interaction may be important for p53-induced apoptosis
by this stress. To investigate this possibility, we tested the effects
of the HDAC inhibitor trichostatin A (TSA) on p53-dependent apoptosis
following treatments with IR and hypoxia. TSA is an inhibitor of HDAC
activity and has been shown to inhibit transcription by several
transcriptional repressors, including p53 (24, 36, 54).
To test the effects of TSA on hypoxia- and IR-induced apoptosis, cells
from
tet-inducible H1299 cells were treated with TSA
alone,
doxycycline, or TSA followed by doxycycline, and cells
with apoptotic
morphology were visualized with Hoechst 33342 and
propidium iodide
staining and counted. As shown in Fig.
9A, TSA
did not cause significant changes
in apoptotic levels in cells
under normoxic or hypoxic conditions or
treated with IR. Addition
of doxycycline prior to treatment induced a
substantial increase
in the apoptotic levels induced by hypoxia or IR.
The level of
apoptosis induced by hypoxia was reduced by TSA to the
level of
Dox treatment alone, suggesting that a trichostatin-sensitive
transcriptional repression pathway mediates almost all p53-dependent
apoptosis under hypoxia. In contrast, only 40% of radiation-induced
apoptosis was inhibited by trichostatin, consistent with our data
demonstrating the interactions of p53 with both transcriptional
activation and repression pathways following IR treatments.

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|
FIG. 9.
(A) TSA inhibits p53-dependent apoptosis under
hypoxia. H1299 cells transfected with a p53 expression vector under the
control of the tetracycline promoter were treated with IR or hypoxia.
One group of cells did not receive any additional treatment (CON). TSA
(25 nM) was added to a second group 1 h prior to treatment. A
third group was treated with doxycycline 2 h prior to treatment, while
both TSA and doxycycline were added to a fourth group prior to
treatments. At the end of the treatment, cells with apoptotic
morphology were visualized with Hoechst 3342 and phosphatidyl inositol
staining. The total number of cells and the number of apoptotic cells
in four different fields in 60-mm-diameter dishes were counted and
expressed as the percentage of the total number of cells. Numbers
represent the average of three independent experiments. Error bars
represent SEM (B) TSA inhibits p53 transrepression under
hypoxia. RKO cells were treated as described above, with the exception
that cells were lysed 6 h after IR treatment and 12 h after
hypoxia treatment. Northern blot analysis was performed on total RNA
using a probe for human -tubulin and 18S rRNA as described above.
|
|
To test whether the reduction of apoptosis by TSA correlated with a
reduction in transcriptional repression, we assayed the
levels of

-tubulin mRNA (Fig.
9B). p53 was induced by the addition
of
doxycycline, and RKO cells were treated in the same manner
as described
above, but cells were lysed at earlier time points
to avoid effects due
to apoptosis. Cells treated with IR were
lysed at 6 h following
treatments, while cells treated with hypoxia
were lysed at 12 h
after the onset of hypoxia. We found that pretreatment
with TSA did not
alter the mRNA levels of

-tubulin in untreated
cells or cells
treated with IR or hypoxia (lanes 4 to 6, respectively).
In contrast,
pretreatment with doxycycline caused a modest decrease
of

-tubulin mRNA levels in untreated cells (lane 7) and cells
treated
with IR (lane 8), and a substantially bigger decrease
in cells exposed
to hypoxia (lane 9). When TSA was added 1 h prior
to doxycycline,
no decrease in

-tubulin mRNA levels was seen
in IR-treated and
hypoxia-treated cells compared to those in control
cells. These results
demonstrate that a strong correlation exists
between the ability of TSA
to reverse hypoxia-induced p53-dependent
apoptosis and to inhibit
p53-dependent
transrepression.
 |
DISCUSSION |
The results described in this study demonstrate that hypoxia is
unique among stresses that modulate p53, as it induces p53 protein
accumulation and transcriptional repression but not the transcriptional
induction of endogenous downstream effector genes. Furthermore, hypoxia
is the first physiological stress that has been shown to lack a
component of transactivation-competent p53 for the induction of apoptosis.
One of the most consistently transactivated genes in response to p53
induction is p21. Both p21 protein and mRNA failed to increase in response to hypoxia in human and rodent cells. The mRNA
levels of other p53 effector genes, bax, GADD-45, and
APO-1-Fas also failed to increase in response to hypoxia.
Furthermore, we have shown that hypoxia not only fails to activate
another important effector of p53, Mdm-2, but actually suppresses its
protein levels. The lack of change in the mRNA levels of Mdm-2 by
hypoxia points to a posttranscriptional mechanism for this decrease,
like decreased mRNA translation or enhanced protein ubiquination. The
results presented here, which show a marked reduction of Mdm-2 levels under hypoxia, provide a direct explanation for the observed
accumulation of p53 under hypoxic conditions. Taken together, the
findings listed above indicate that the dissociation between p53
accumulation and effector activation is not limited to one experimental
system, nor does it apply to one effector, but instead it reflects a
conserved, stress-specific cellular response.
The results from the experiments in which hypoxia is combined with IR
treatments strongly suggest that the lack of p53 transactivation under
hypoxia is due to a specific posttranslational modification(s) of p53
or an accessory protein which requires DNA damage for induction. Phosphorylation of p53 at different sites, including Ser15 and Ser20,
has been proposed to induce the transcriptional activity of p53.
However, at least for phosphorylation at the Ser15 position of human
p53, this does not appear to be the case. Hypoxia was found to induce
significant phosphorylation of Ser15, indicating that modification of
this site alone is not sufficient for transcriptional activity.
Furthermore, Ser15 phosphorylation does not appear to be required for
p53 protein accumulation under hypoxia, since we have shown that the
decrease in Mdm-2 levels under hypoxia is most likely the mechanism of
p53 accumulation under these conditions (2).
Our immunocytochemistry experiments also rule out the possibility that
the lack of p53 transactivation is due to a failure of hypoxia-induced
p53 to accumulate in or be actively transported to the nucleus of RKO
cells. These results extend our previous findings using untransformed
human fibroblasts but also raise the interesting possibility that the
mechanism for p53 accumulation by hypoxia is different from the one
responsible for induction by DFO or other hypoxia-mimicking agents.
While DFO and CoCl2 have been extensively used as a
biochemical surrogate of hypoxia, we have found that at the molecular
level these stresses exhibit significant differences in their profiles
of induction of gene expression (Denko et al., unpublished
observations). However, the finding by Ashcroft et al. that p53
accumulated by a nongenotoxic stress is not transcriptionally active is
in agreement with our study (3).
The failure of p53 to become acetylated on Lys382 or to associate with
p300 under hypoxia indicates that the lack of p300-p53 interaction and
C-terminal acetylation may be responsible for the lack of p53-dependent
transactivation of endogenous effector genes under hypoxia. These
findings also underscore the requirement for C-terminal acetylation for
p53-dependent transactivation, irrespective of other modifications that
may occur at the N terminus. Other modifications like phosphorylation
of Ser20 or phosphorylations at the C terminus in response to hypoxia
treatments are currently being investigated.
The lack of association between p53 and p300 and acetylation of p53 at
Lys382 under hypoxia is intriguing and may provide a biochemical handle
for understanding the relationship between posttranslational
modifications and activity of p53. Alternatively, this lack of
interaction between the two proteins may be due to functional
competition of p53 with factors that limit the availability of p300.
Interestingly, another hypoxia-inducible factor, p35srj, has been
reported to associate with p300 and to inhibit Hif-1
activity
(5). A similar mechanism could be responsible for disrupting the association of p300 with p53. Still, our results with the combined hypoxia-DNA-damaging treatments suggest that if any
competitive inhibition is responsible for lack of p53 transactivation under hypoxia, then DNA damage must shift the dynamics of this competitive inhibition towards a functional p53-p300 interaction.
It has been proposed that while p53 requires a functional interaction
with the transcriptional coactivator p300 and PCAF (both proteins have
histone acetylase and chromatin decondensation activities), p53-dependent transrepression may require interactions with proteins that possess deacetylase and chromatin condensation properties, like
HDACs (19, 36). Murphy et al. have shown that p53 can coprecipitate not only with mSin3A but also with HDAC, indicating that,
by binding to an as yet unidentified factor, p53 can recruit the HDAC
complex to the promoter. Using an immunoprecipitation-PCR-based assay,
they also demonstrated that this interaction occurs at the promoters of
the repressed genes like MAP4 (36). Our
coimmunoprecipitation studies lend support to the finding that p53
interacts with the histone deacetylase complex in vivo through mSin3A.
This interaction between p53 and mSin3A is particularly strong under hypoxia.
What is the biological role of p53-dependent transrepression under
hypoxia? Murphy et al. have shown that overexpression of the
p53-repressed gene MAP4 delayed the onset of apoptosis induced by
activation of a temperature sensitive-p53 construct (35). More recently, work from the same investigators has shown that compromising transcriptional repression by inhibiting histone deacetylase activity results in a dramatic decrease in the levels of
p53-dependent apoptosis (36). Here, we also demonstrate
that TSA decreases p53-dependent apoptosis and transrepression of
-tubulin under hypoxic conditions, to the levels of
doxycycline-treated cells alone, indicating that almost all of
hypoxia-induced apoptosis occurs through this trichostatin-sensitive
pathway. This result is consistent with our finding that
hypoxia-inducible p53 only interacts with transcriptional corepressors
such as mSin3A and does not interact with transcriptional cofactors
such as p300. Furthermore, as DNA damage induces interactions between
p53 and both transcriptional coactivators and repressors, trichostatin only reduced radiation-induced apoptosis by 40%. Thus, in the case of
activation of p53 by DNA damage, both transcriptional activation and
repression pathways appear to be involved, as has been reported in the literature.
The results presented here describe a new paradigm for the regulation
of p53 function by a physiological stress. As depicted in our model
(Fig. 10), DNA damage induces the
modification of p53 and interaction with accessory proteins that result
in two pools of p53, one that possesses transactivation potential and one that possesses transrepression potential. Each pool of DNA damage-induced p53 is capable of inducing apoptosis. In contrast, hypoxia-induced p53 primarily interacts with transcriptional
corepressors in signalling for apoptosis. Although a variety of genes
exist that are transcriptionally repressed by p53, the identification of that gene(s) that modulates the critical effectors of apoptosis such
as APAF-1 and caspase 9 (47) in a p53-dependent manner will be the next major contribution to understanding tumor suppression.

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|
FIG. 10.
Model for the regulation of p53 function by genotoxic
stress (top) and hypoxia (bottom). See text for details.
|
|
 |
ACKNOWLEDGMENTS |
This work was supported by National Institutes of Health (NIH)
grants CA67166, CA64489, and CA88480 to A.J.G. and ES05777 to
M.B.K. C.K. was supported by National Research Service Award F32CA675754-02 from the NIH. M.B.K. is the Steven Birnbaum Scholar of the Leukemia Society of America and is also supported by the American Lebanese Syrian Associated Charities of St. Jude Children's Research Hospital.
We thank Thea Tlsty for helpful suggestions and Nick Denko for critical
review of the manuscript.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Stanford
University School of Medicine, CCSR-South, Room 1255, 269 Campus
Drive, Stanford, CA 94305-5152. Phone: (650) 723-7366. Fax: (650)
723-7382. E-mail: giaccia{at}stanford.edu.
Present address: Department of Radiation Oncology, Wake Forest
University School of Medicine, Winston-Salem, NC 27157.
 |
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Molecular and Cellular Biology, February 2001, p. 1297-1310, Vol. 21, No. 4
0270-7306/01/$04.00+0 DOI: 10.1128/MCB.21.4.1297-1310.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
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