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Molecular and Cellular Biology, June 2002, p. 4181-4188, Vol. 22, No. 12
0270-7306/02/$04.00+0 DOI: 10.1128/MCB.22.12.4181-4188.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.
Department of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania 15260
Received 8 February 2002/ Returned for modification 8 March 2002/ Accepted 18 March 2002
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The molecular mechanisms of proteolysis in muscle have been extensively studied (3, 4, 15, 31-33, 44, 45, 51), although there is considerable uncertainty remaining about the specific roles of the proteolytic systems involved. Moreover, several external signals that regulate muscle proteolysis have been identified but we know little about how intramuscular signal-transduction mechanisms might couple external stimuli to the regulation of protein degradation.
We have been developing a genetically tractable model for studying the regulation of proteolysis in muscle, using strains of the nematode Caenorhabditis elegans that express a transgene-coded LacZ reporter protein specifically in body-wall and vulval muscles. This protein is completely stable in well-fed wild-type animals, but its degradation can be triggered by starvation (59) or by loss of cholinergic neural inputs (50). In both instances, the activation of preexisting proteolytic systems is sufficient to account for the observed protein degradation. The reporter protein is ubiquitinated in starved animals (59), and inhibitor data indicate that proteasome activity is required for its degradation (50).
Ras signaling is known to be important in a number of disease states associated with muscle wasting. We report here that proteolysis in muscle is triggered acutely by activation of the Ras homologue LET-60, that signaling occurs by the Raf-MEK-MAPK cascade of protein kinases, and that the resultant protein degradation uses a preexisting proteolytic system. We also show that reduction-of-function mutations in this pathway do not affect starvation-induced or denervation-induced protein degradation, implying that the various mechanisms of stimulating proteolysis in muscle are at least partly distinct.
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-D-mek(gf) hs-mpk-1(wt)] IV was obtained from S. Kim; at 25°C, the constitutively active Drosophila MEK homologue activates wild-type C. elegans MPK-1 expressed from a heat shock promoter (28). Strains containing unlinked mutations and/or the integrated transgene (59) ccIs55(unc-54::lacZ) on linkage group V or the transgene iwIs16(act-4::lacZ) on linkage group X (49) were constructed by conventional genetic methods. A double-mutant strain containing let-60(ga89ts) and lin-45(sy96) on LG IV was obtained by constructing a lin-45/unc-24 let-60 heterozygote, selecting (at 25°C) their nonuncoordinated multivulva (MuV) progeny (presumed lin-45 let-60/unc-24 let-60 recombinants arising by crossing over between let-60 and unc-24), and then selecting their vulvaless (Vul) progeny (at 20°C) to obtain lin-45 homozygotes. The presence of suppressed let-60(ga89ts) in this strain was confirmed by the production of MuV individuals at 25°C after outcrossing. Methods for histochemical staining of ß-galactosidase with 5-bromo-4-chloro-3-indolyl-ß-D-galactopyranoside (X-Gal) were as described previously (59). Staining times were 1 to 2 h at room temperature, governed by visual examination of stained control animals (wild type or mutant at permissive temperature) included with every experiment. Stained animals were photographed on Kodak Ektachrome EH-160 transparency film under bright-field illumination with a red suppression filter or, in some later experiments, with a Nikon 990 digital camera. The automatically controlled exposure is dominated by the bright-field background and depends little on the intensity of staining of the animals being photographed and is thus approximately constant from experiment to experiment.
Methods for gel electrophoresis, fluorometric assay of ß-galactosidase activity, and immunoblotting and quantitation were as described previously (59). Movement rates were measured as previously described (6), except that rates were measured with animals suspended in liquid (70 mM potassium phosphate, 70 mM NaCl [pH 7]). Optical measurement of worm growth was as described previously (6).
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To determine whether Ras signaling regulates muscle protein degradation, we constructed strains containing the unc-54::lacZ transgene in combination with the let-60 Ras mutant allele ga89ts. The ga89ts mutant Ras has temperature-sensitive GTPase activity (16), such that Ras signaling is activated at the nonpermissive temperature (25°C). Well-fed ga89ts homozygotes expressed approximately wild-type levels of LacZ fusion protein when grown at 16°C. To measure protein degradation without regard to any potential effects of Ras on transcription or translation of the unc-54::lacZ transgene, we grew animals to mid-adulthood at 16°C, such that lacZ expression was essentially completed. Studies have shown previously (59) that the fusion protein is completely stable in well-fed wild-type animals (Fig. 1c), so that any subsequent decline in LacZ levels (as measured by either ß-galactosidase activity or immunoreactive protein) in a mutant strain must represent net degradation of the preexisting LacZ fusion protein. We found that activated-Ras (ga89ts) homozygotes, when shifted to 25°C as adults, showed a time-dependent loss of preexisting reporter protein that did not occur in similarly treated wild-type animals (Fig. 1). In these and all subsequent experiments below, the amounts of 146-kDa reporter protein (Fig. 1b, c, and d) and the levels of ß-galactosidase activity (Fig. 1c and d) declined in parallel.
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FIG. 1. Ras activation promotes proteolysis in muscle. (a) Animals stained for ß-galactosidase activity (blue) after growth at 16°C (left) or 72 h after young adults grown at 16°C were shifted to 25°C (right) either with (+CH) or without (-CH) cycloheximide at 400 µg/ml. (b) Immunoblot analysis of 146-kDa fusion protein in 30-worm lysates. Each band shown from left to right in the two rows of bands is the 146-kDa band from the corresponding animal shown from left to right in panel a. (c) Kinetics of loss of ß-galactosidase activity at 16°C (open circles and squares) or at 25°C (filled circles and squares) in wild-type (circles) or let-60(ga89ts) (squares) homozygotes. Diamonds show decline of protein in ga89ts after a shift to 25°C, measured by Western blot analysis similar to that described for panel b. (d) Quantitation of 146-kDa fusion protein (open bars) by integration of the bands shown in panel b for the 72-h group and of ß-galactosidase activity (striped bars) by fluorometric assay of 10-worm lysates. Data are means ± standard deviations of triplicate samples.
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We have also examined in a more limited way the effect of activated Ras on the stability of an ACT-4::LacZ fusion encoded by the integrated transgene iwIs16 (49). In contrast to the much larger N-terminal moiety on the UNC-54::LacZ fusion protein, the ACT-4::LacZ fusion protein adds only the first 14 amino acid residues of ACT-4 (actin) to the N terminus of Escherichia coli LacZ and is expressed from the act-4 promoter in 95 body-wall muscle cells, the eight vulval muscles, and the spermathecae. The ACT-4::LacZ fusion was also completely stable in wild-type animals and was degraded (in muscles but not the spermathecae) in activated-Ras (ga89ts) homozygotes after a shift to 25°C, with kinetics approximately the same as those we observed for the UNC-54::LacZ fusion. This suggests that the in vivo stabilities of the fusion proteins are determined primarily by the large LacZ regions (1,015 residues) rather than by the smaller N-terminal fusion regions. Furthermore, we examined a strain expressing soluble, cytosolic green fluorescent protein from an unc-54 promoter (but with no added amino acid residues) and, after activation of ga89ts Ras at 25°C, observed time-dependent loss of green fluorescent protein fluorescence in body-wall muscle over 72 h. Thus, these various reporter proteins provided us with information about a Ras-induced proteolytic process in body-wall muscle cells that is not specific for LacZ.
We infer that protein catabolism is provoked by activation of Ras signaling rather than by some other peculiar property of ga89ts mutant Ras, because protein is also degraded in other strains with Ras activation. We observed (Fig. 2) protein degradation in strains homozygous for a constitutively active (47) let-60 allele (n1046) and in strains with increased Ras activation as the result of reduction-of-function mutations in the Ras GTPase-activating protein gene (20, 21) gap-1 or gap-2. Additionally, the gap-1 reduction-of-function mutation enhanced protein degradation at 25°C in a strain carrying let-60(ga89ts). It is notable that the gap-1 and gap-2 single mutants do not show the MuV phenotype (20, 21) characteristic of strong Ras activation (47).
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FIG. 2. Ras activation, but not LET-23 EGFR activation, promotes degradation. (a) Adult animals grown at 20°C were stained for ß-galactosidase activity. (b) ß-Galactosidase activity as a function of age of wild-type and let-23(sa62)-activated EGFR animals. Age-synchronized L1 larvae were grown for 84 h at 16°C and then shifted to 25°C at the 0 time point. Data represent means ± standard deviations of fluorometric assays of triplicate 10-worm samples.
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Ras activation induces changes in gene expression through the action of various downstream effectors, which in many cases act to promote the transcription of specific genes. To determine if Ras activation stimulates proteolysis by inducing de novo gene expression, we followed protein degradation in ga89ts mutant animals treated with cycloheximide. Studies have previously shown that cycloheximide at this concentration blocks protein synthesis within a few minutes at most but does not affect the rate of protein degradation in muscle (59). If Ras-induced proteolysis required the participation of newly synthesized proteins (e.g., signaling proteins, proteases, etc.), then cycloheximide should block the Ras effect and the LacZ reporter protein should remain stable after a shift to 25°C. To the contrary, we observed that onset of Ras-induced protein degradation was not blocked by cycloheximide added at the time of a shift to 25°C (Fig. 1), implying that stimulation of proteolysis does not require the synthesis of new proteins but is mediated by preexisting signaling proteins and proteases. Pretreatment with cycloheximide for 6 h prior to a shift to 25°C did not alter this result (data not shown), mitigating against the possibility that relevant Ras-induced gene expression takes place in a (hypothetical) brief period before protein synthesis is blocked by cycloheximide. Cycloheximide-treated wild-type controls showed little or no LacZ degradation over the same time interval (Fig. 1) (59).
The Ras effect is physiological rather than developmental. Ras activation is widely known to affect the developmental fates of specific cells in C. elegans (47) as well as in other organisms (8, 11, 39). To distinguish developmental effects of Ras on the muscle cells from acute physiological effects on protein degradation in those cells, we performed temperature upshift and downshift experiments with let-60(ga89ts) homozygotes. Figure 3 shows that animals shifted from 25 to 15°C conditions at or prior to adulthood retained full ß-galactosidase activity and that animals shifted from 15 to 25°C conditions well after adulthood still lost significant activity. In other words, early Ras activation at 25°C does not provoke later protein degradation if the mutant animals are returned to the permissive temperature (15°C) prior to reaching adulthood. Conversely, mutant animals raised to adulthood at 15°C, and thus having a near-wild-type experience during development, can still be provoked after reaching adulthood to degrade muscle protein when Ras is activated by a shift to 25°C. These observations imply that Ras activation promotes protein degradation by acutely stimulating proteolysis rather than by altering some developmental process in the muscles. This is entirely consistent with the inference from the cycloheximide experiments (Fig. 1) that Ras activation causes signal to pass via preexisting proteins to a preexisting proteolytic system.
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FIG. 3. Ras activation effects on ß-galactosidase in muscle are acute rather than developmental. Ras mutant [let-60(ga89ts)] animals were grown at 15°C or 25°C, and L1-L2 animals at each temperature were then transferred to nine new plates. At 0, 8, 24, 32, 53, 57, 68, 72, and 80 h after transfer, one plate was moved from 15°C to 25°C and one was moved from 25°C to 15°C. At 119 h after transfer, 50 animals from each plate were stained for ß-galactosidase activity and the stained animals were examined to score the fraction showing full-body staining (ordinate). Times of temperature shift were normalized to growth at 20°C (7) to generate the abscissa.
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The ectopic differentiation of hypodermal cells to produce the MuV phenotype is efficiently signaled by activation of the LET-23 receptor (2, 48), a homologue of mammalian epidermal growth factor receptor (EGFR) which signals via Ras (47). To test whether LET-23 also signals to Ras to induce muscle proteolysis and to further examine the lack of correlation between the Ras-induced protein-degradation and MuV phenotypes, we constructed a strain carrying the unc-54::lacZ transgene and an activating mutation in the extracellular domain of LET-23 (25). This mutant strain [homozygous for let-23(sa62)] showed high penetrance and expressivity of the MuV phenotype (Fig. 2a) but on the basis of histochemical staining did not obviously degrade the LacZ reporter. Quantitative fluorometric assaying of ß-galactosidase activity (Fig. 2b) showed that the ß-galactosidase levels in the activated-LET-23 mutants were about 50 to 70% of those in wild-type animals of similar chronological age; this is approximately proportionate to the reduced body size of the mutants (Fig. 2a), so the lower activity on a per-animal basis is likely to reflect only generally reduced growth and protein synthesis rather than increased protein degradation as a result of LET-23 activation. Furthermore, there was no loss of LacZ reporter protein as assayed over time by Western blotting and reporter activity did not disappear in let-23(sa62) animals treated with cycloheximide. We conclude that the LET-23 EGFR does not signal to cause Ras activation in muscle, consistent with the fact that no LET-23 expression has been reported in muscle (23).
Raf, MEK, and MAPK are downstream Ras effectors.
Ras effects may be mediated by a wide variety of downstream effectors (8); the effect on hypodermal development in C. elegans involves signal transduction by the Raf-MEK-MAPK cascade of protein kinases (47). To determine whether Ras signals protein degradation in muscle by the same pathway, we constructed strains containing the unc-54::lacZ transgene and temperature-activated let-60(ga89ts) in combination with mutant alleles that produce reduction of function in the protein kinases Raf [lin-45(sy96)], MEK [mek-2(ku114)], or MAPK [mpk-1(n2521)]. In each case, a mutation in Raf, MEK, or MAPK efficiently suppressed Ras-induced protein degradation after temperature upshift (Fig. 4). Ras-induced protein degradation in ga89ts mutant animals was also prevented by 1 µM PD-98059, a pharmacological inhibitor of MEK activity (1, 14). Conversely, mutational activation of a MAPK transgene [EF1
-D-mek(gf) + hs-mpk-1(wt)] (28) was sufficient to provoke protein degradation (Fig. 4). Note that in this case there was an obvious lag between the shift to 25°C and the onset of reporter protein degradation, as would be expected if degradation were triggered only after MPK-1 had been expressed de novo from the heat shock promoter.
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FIG. 4. Reduction-of-function mutations in downstream effectors suppress Ras-induced protein degradation. (a) Histochemical stain for ß-galactosidase activity in muscle. (b) Immunoblot analysis of 146-kDa fusion protein in 30-worm lysates. Each row of bands shows the 146-kDa lacZ fusion bands from the corresponding double-mutant animal shown in panel a. (c) Quantitation of 146-kDa fusion protein (open bars) by integration of the bands at 72 h (gel in panel b) and of ß-galactosidase activity (filled bars) by fluorometric assay of 10-worm lysates made 72 h after a shift to 25°C. Data represent means ± standard deviations of triplicate samples.
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Ras activation does not cause starvation or loss of neural function. Five lines of evidence indicate that protein degradation in activated-Ras mutants is not the result of starvation. First, ga89ts animals raised at 25°C grew at a rate indistinguishable from that of wild-type animals (Fig. 5), whereas starved animals show arrested development or markedly decreased growth rate. Second, ga89ts animals raised at 25°C do not enter the dauer larva state associated with poor nutritional status (9). Third, ga89ts animals did not catabolize lipid stored in the intestinal cells after a shift to 25°C (as judged by staining with Sudan Black [reference 27 and data not shown]), whereas these stores are completely depleted after about 8 h of acute starvation (S. J. Barmada and L. A. Jacobson, unpublished data). Fourth, ga89ts animals degraded LacZ protein in all muscles at 25°C (Fig. 1), whereas in starved wild-type animals (or starved ga89ts mutants at 16°C) the protein is degraded in the posterior body-wall muscles but preserved in head and vulval muscles (50). Fifth, Ras-induced reporter degradation was significantly slower (50% degradation in about 72 h at 25°C; Fig. 1) than is starvation-induced degradation (50% degradation in 16 h at 20°C [59]). This kinetic discrepancy is large enough to preclude experiments to determine whether Ras-induced and starvation-induced protein degradation would be quantitatively additive.
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FIG. 5. Growth rates of wild-type (filled diamonds) and Ras mutants [let-60(ga89ts); open squares] at 25°C. Eggs were laid on plates for 2 h; the 0 time point represents the end of this period. Data show means ± standard deviations of results from 6 animals at each time point.
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FIG. 6. Reduction-of-function mutations in mek-2 or mpk-1 do not block starvation- or denervation-induced proteolysis. Histochemical stains for ß-galactosidase activity in muscle are shown. Starvation of adult animals was for 24 h at 20°C as described previously (59). At 25°C the cha-1(p1182ts) mutation blocks acetylcholine synthesis; these animals were essentially wild-type at 20°C in both movement and protein degradation. The mek-2 mutants appear short because of a dpy-13 mutation in the background.
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TABLE 1. Ras activation leads to time-dependent loss of mobilitya
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We presently believe that starvation and Ras activation trigger different proteolytic mechanisms. We have previously shown that in starved or denervated animals, the LacZ reporter protein becomes conjugated to ubiquitin (59) and that its subsequent inactivation is prevented by inhibitors of the proteasome (50). By contrast, the protein degradation provoked by Ras activation was not prevented by proteasome inhibitors Z-leu3-CHO (Fig. 7) or clasto-lactacystin-ß-lactone (not shown), implying that Ras-induced degradation occurs by a mechanism independent of proteasome activity. Furthermore, in starvation-induced degradation it is characteristic that 146-kDa protein (as detected on Western blots) is lost more rapidly than is ß-galactosidase activity, because proteolytic fragments remain noncovalently associated in active tetramers (59). By contrast, our data indicate that during Ras-induced reporter degradation there was a very good correlation between the disappearance of 146-kDa protein and that of activity (Fig. 1), perhaps implying that early proteolytic cleavages result in loss of activity. Taken together, these observations thus suggest that Ras-induced reporter degradation occurs by a mechanism distinct from that provoked by starvation or denervation.
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FIG. 7. Proteasome inhibitor Z-leu3-CHO does not prevent Ras-induced protein degradation. Mutant strains [cha-1(p1182ts) or let-60(ga89ts)] were grown at 16°C and shifted as young adults to 25°C either with or without 200 µM Z-leu3-CHO (MG-132; BIOMOL Research Laboratories) and then stained with X-Gal 68 h later. The cha-1ts mutants were unable to synthesize acetylcholine at 25°C and were both genetically denervated and starved because they ceased feeding.
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There is certainly no reason to suppose that the degradation of the UNC-54::LacZ fusion protein in any way represents the catabolism of normal UNC-54 myosin heavy chains. The N-terminal UNC-54 fragment represents only a portion of the myosin ATPase domain (263 residues of the 1,966 present in full-length UNC-54) and is evidently insufficient to support assembly of the fusion protein into myofilaments. It was reported (59) that early in starvation-induced degradation, this region may be separated from the LacZ domain by a set of proteolytic cleavages. Our phalloidin staining results indicate that myofibrils are largely resistant to the proteolytic processes that degrade the reporter proteins. We believe that these soluble reporter proteins are instead reporting on the processes that are most likely to affect the soluble proteins of the muscle cytosol. There are few reliable identifications of endogenous muscle-specific, soluble cytosolic proteins, and few tools are available for studying them. Experiments to identify other endogenous substrates among soluble muscle proteins are presently in progress in our laboratory.
There are some caveats to the use of fusion proteins as reporters, one of which is that if misfolded, they may enter a misfolded-protein degradation pathway (37). However, it is very unlikely that the reporter proteins we have studied are degraded simply because they are recognized as misfolded. There is no direct way to assess the conformation of the N-terminal UNC-54 fragment, but we infer that the C-terminal 1,015-residue portion of the UNC-54::LacZ reporter protein achieves a native or near-native ß-galactosidase conformation because the protein-protein subunit contacts are properly formed to promote association into tetramers (59) and the assembled tetramers have ß-galactosidase activity. The crucial point is that in the context of well-fed wild-type animals, this fusion protein is completely stable (59) and thus does not by default enter a misfolded-protein degradation pathway by virtue of its structure alone. Even after Ras activation its degradation is not rapid, proceeding at a rate four- to fivefold lower than in starved animals.
Neither is it plausible that these fusion proteins are somehow identified as foreign and consequently singled out for degradation by a proteolytic system that has no endogenous protein substrates. It is extremely difficult to imagine how such discrimination might be achieved at the molecular level; indeed, even the best-known examples of enzymes that selectively degrade foreign molecules, the DNA restriction endonucleases, do not differentially identify foreign DNA molecules at all but instead ignore resident DNA because its recognition sites have been methylated. Thus, the transgene-coded proteins in our studies are probably reporting on the activity of a protein-degradation system that has naturally occurring protein substrates in muscle cells. In many of the most familiar instances of Ras-Raf-MEK-MAPK signaling, downstream effectors are phosphorylated by MAPK to trigger an increase in transcription leading to either a developmental decision (e.g., the differentiation of hypodermal precursor cells to form the C. elegans vulva [47]) or a more general increase in biosynthetic activity (e.g., increased cell proliferation after transformation). We have consequently become accustomed to thinking of Ras signaling as having fundamentally anabolic consequences, and it thus seems paradoxical at first that Ras-MAPK signaling should also promote the catabolism of existing proteins.
There are some cases in mammals where Ras-MAPK signaling has been implicated in promoting proteolysis of specific proteins, such as cell cycle regulators cyclin D1 (42), cyclin-dependent kinase inhibitor p27Kip1 (26), and myc (41). It has also been reported that matrix metalloprotease (22) and cathepsin (43) activities are upregulated by Ras signaling. However, this is the first report that Ras-MAPK signaling promotes protein degradation in differentiated muscle.
The body-wall muscle of C. elegans is most nearly similar to the striated skeletal muscle of vertebrates (55). A signaling process in mammalian skeletal muscle analogous to that we have uncovered in C. elegans muscle is suggested by the observations (38) in cultured mouse myotubes that expression of activated Raf promotes atrophy and, conversely, that expression of dominant-negative Raf promotes hypertrophy. It is important to note, however, that these cellular responses were not shown directly to reflect Raf-responsive change in the rate of proteolysis.
Signaling by the Ras-MAPK pathway opposes the conversion of committed mammalian myoblasts into terminally differentiated skeletal muscle (13, 35, 54), and Ras activation is classically associated with transformation or dedifferentiation (11), although it is not clear that the same Ras effectors mediate all these effects (56). On the other hand, it is evident that in order to lose its differentiated phenotype(s) and structures, a cell not only must synthesize new proteins but also must degrade at least some key proteins characteristic of the differentiated state (e.g., myoD in muscle [34, 46]). A similar argument may apply to remodeling of differentiated tissue. Protein degradation in skeletal muscle is increased by heavy exercise (5, 12, 24, 36), which also promotes an increase in MAPK activation (40, 57, 58). Thus, our results raise the intriguing possibility that the stimulation of proteolysis by Ras-MAPK signaling is an important feature of transformation and/or remodeling in mammalian muscle.
It is also worth considering more generally whether the temporal sequence of stimulation of protein synthesis and of protein degradation, and/or the balance between these processes, determines whether Ras signaling results in catabolic, anabolic, or remodeling effects. It may be significant in this context that Ras-stimulated protein degradation appears to involve the activation of a preexisting proteolytic system rather than to depend upon the synthesis of new proteins. This implies that the earliest response to Ras activation might be an increase in degradation of existing proteins and that a lag would likely intervene before Ras-promoted stimulation of transcription resulted in the eventual synthesis and accumulation of new proteins. A temporal separation of this kind would be well suited to facilitating a change in differentiated state or significant remodeling of a relatively plastic tissue like muscle.
We are grateful to A. Fire, D. Eisenmann, S. Kim, A. Golden, J. Shaw, and M. Han for generously providing nematode strains, M. Sundaram for useful discussions, and R. Harper for technical assistance. Many strains were obtained from the Caenorhabditis Genetics Center, which is supported by the NIH National Center for Research Resources.
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