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Molecular and Cellular Biology, October 2002, p. 6809-6819, Vol. 22, No. 19
0270-7306/02/$04.00+0 DOI: 10.1128/MCB.22.19.6809-6819.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.
Laboratory of Metabolism, National Cancer Institute, National Institutes of Health, Bethesda, Maryland 20892 ,1 Department of Cell and Developmental Biology, University of Wuerzburg, Wuerzburg, Germany ,2 Laboratory of Nutrition, Tohoku University, Sendai, Japan3
Received 16 May 2002/ Returned for modification 25 June 2002/ Accepted 2 July 2002
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The end of mitosis is associated with the dephosphorylation of lamins, re-formation of the nuclear membrane, and reestablishment of nuclear import activity. The exact fate of the phosphorylated regulatory factors and chromatin binding proteins at this stage has not been investigated in detail. Phosphorylation plays an essential role in the interaction of proteins with nuclear import and export factors (17) and with 14.3.3 proteins (10). As such, phosphorylation plays an important role in regulating nuclear transport and determining the intracellular compartmentalization of proteins (17, 30). We have reported that HMGN proteins relocate with chromatin only in late telophase after the formation of the nuclear membrane (15, 33); however, the relationship between the phosphorylation state of HMGN proteins and their reentry into the newly formed nucleus has not yet been studied.
In this report we demonstrate that phosphorylation of the nucleosomal binding domain (NBD) of HMGN1 proteins impairs their ability to enter the nucleus. Using specific point mutations, we demonstrate that the inability to enter the nucleus is a specific consequence of phosphorylation rather than inactivation of the bipartite nuclear localization signal (NLS) by the presence of negative charges in the proteins. We demonstrate that phosphorylation promotes the binding of HMGN1 to specific isotypes of 14.3.3 proteins both in vivo and in vitro and suggest that the mitotic phosphorylation of the NBDs of HMGN proteins serves not only to abolish their binding to nucleosomes but also to recruit specific 14.3.3 proteins. Recruitment of 14.3.3 may serve as another mechanism to ensure that HMGN proteins do not bind to mitotic chromatin and may also retard the nuclear reentry of HMGNs in late telophase. Our results provide a direct link between mitotic phosphorylation, nuclear import, and chromatin binding and may be of general relevance to understanding the consequences of this modification on the function of chromatin binding proteins.
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-32P-labeled ATP. The phosphorylated proteins were stored frozen at -20oC. The levels of phosphorylation were analyzed by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and autoradiography. The import assays were performed essentially as described previously, using digitonin-permeabilized HEp-2 cells and Xenopus laevis egg extracts (15). The egg extracts were preincubated for 30 min at room temperature with an ATP-regenerating system either with or without 10 µM okadaic acid (ICN). The transport mixture contained phosphorylated protein and 15 µl of preincubated Xenopus egg extract to give a final concentration of 10 mg of extract per ml, 20 mM HEPES (pH 7), 11 mM potassium acetate, 2 mM dithiothreitol (DTT), 1 mM EGTA, 2 mM ATP, 20 mM creatine phosphate, 100 µg of creatine phosphokinase (Sigma) per ml, 0.5 mM GTP, and 12 µg of import substrate per ml. After import for 1 h at 22°C, the cells were fixed with 2% formaldehyde for 10 min and immediately examined by confocal laser scanning microscopy, using identical settings for all the proteins. The stability of the phosphorylation in the egg extracts was tested in parallel, using 150 ng of phosphorylated protein incubated with egg extract that either did or did not contain okadaic acid. The reaction mixture was analyzed by SDS-PAGE and autoradiography. For nuclear export inhibition assays, mouse fibroblasts were cultured for 5 h in the presence of 20 ng of leptomycin B (Sigma) per ml as previously described (3). Cells were immunostained as described below.
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, -
, and -
isoforms were mixed with 50 µg of recombinant HMGN1, PKC-phosphorylated HMGN1, or HMGN1S20,24E mutant, in 1 ml of TBSN buffer (50 mM Tris [pH 8.0], 150 mM NaCl, 1% Igepal Ca-630 (Sigma-Aldrich), 5 mM EGTA, 1.5 mM EDTA, 1 mM DTT) complemented with Complete protease inhibitor (Roche Diagnostic). The mixture was incubated with end-over-end shaking for 2 h at 4°C. Beads were recovered by centrifugation and washed four times in TBSN buffer. Washed beads were mixed with 60 µl of SDS-PAGE sample buffer, boiled, and centrifuged, and the proteins in the supernatants were analyzed by SDS-PAGE and by immunoblotting with either anti-HMGN1 or anti-NBD2P antibody which specifically recognizes phosphorylated HMGN1. |
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FIG. 1. Relocalization of HMGN1, but not of phosphorylated HMGN1, with nuclear DNA during telophase. Confocal immunofluorescence microscopy of mouse embryonic fibroblasts with antibodies elicited against either the C-terminal domain of mouse HMGN1 (A) or against the phosphorylated NBD of HMGN1 (B). The locations of the antibodies were determined by indirect immunofluorescence with fluorescein-labeled goat anti-rabbit immunoglobulin G. Note the increased colocalization of HMGN1 with DNA and the gradual decrease in extrachromosomal HMGN1 as the cell progresses through telophase. The panels boxed in red depict cells in late telophase. Note the differences in color of the nucleus in the merged panels in panels A and B. In panel B, panels 5 are confocal images from cells grown in the presence of leptomycin B (LMB). Bars, 10 µm.
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-32P-labeled ATP. Next, we added equal amounts of either phosphorylated or nonphosphorylated 5IAF-labeled HMGN1 to digitonin-permeabilized HEp-2 cells, used an X. laevis egg extract as a source of import factors, and visualized the locations of the fluorescent HMGN1 proteins (Fig. 2A). Based on the fluorescence intensity, the import of the phosphorylated protein was significantly less efficient than that of the nonphosphorylated proteins (Fig. 2A, top row, compare panels 1 and 2). Since the X. laevis extracts contain phosphatases that dephosphorylate the PKC-phosphorylated HMGN1 (Fig. 2B), the protein that entered the nucleus could be the unphosphorylated species. We therefore inhibited the phosphatases by treating the extracts with okadaic acid (Fig. 2B) and used the okadaic acid-treated extracts as a source of import factors that would facilitate the entry of the fluorescently labeled HMGN1 into the permeabilized HEp-2 cells. Fluorescence microscopy indicated that the okadaic acid treatment did not interfere with the import of either wild-type HMGN1 (Fig. 2A, bottom row, panel 1) or the NLS-conjugated autofluorescent protein allophycocyanin (Fig. 2A, bottom row, panel 3) but strongly inhibited the nuclear entry of the phosphorylated HMGN1 protein (Fig. 2A, bottom row, panel 2). Therefore, we conclude that phosphorylation of the NBD prevents the nuclear entry of HMGN1.
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FIG. 2. Phosphorylation of HMGN blocks nuclear import. (A) Inhibition of phosphatase activity blocks nuclear import of phosphorylated HMGN1. Fluorescein-labeled HMGN1 is diagrammed at the top of panel A; 5IAF is the fluorescent acetamide-fluorescein attached to the C-terminal domain of the protein, P denotes PKC-phosphorylated serines in the NBD of HMGN1, and NLC-APC is the NLS-allophycocyanin conjugate. Confocal images visualizing the import of fluorescein-labeled HMGN1 into permeabilized HEp-2 cells, mediated by a X. laevis egg extract that contained or did not contain okadaic acid. In the absence of okadaic acid, the phosphorylated HMGN1 protein (P-HMGN1) was imported into the nucleus less efficiently than the nonphosphorylated HMGN1, as evidenced by the intensity of the fluorescent signal (compare panels 1 and 2 in top row). In the presence of okadaic acid, the import of the phosphorylated protein but not that of the nonphosphorylated protein was totally blocked (compare panels 1 and 2 in bottom row). (B) Stability of HMGN1 phosphorylation in Xenopus egg extracts treated with okadaic acid and analyzed by SDS-PAGE. 5IAF-labeled HMGN1, phosphorylated with 32P ATP by PKC, was incubated in Xenopus egg extract that contained (+) or did not contain (-) okadaic acid (OA). An aliquot of the phosphorylated protein was added to the molecular size markers (lane 1). Note that okadaic acid inhibited the phosphatase activity in the egg extract (compare lane 2' to lane 3'). (C) Negative charges in the NBD do not inhibit nuclear import. Import of fluorescently labeled HMGN1, phosphorylated HMGN1 (P-HMGN1), or the negatively charged HMGN1S20,24E mutant with extracts containing okadaic acid. Note that the phosphorylated HMGN1 protein does not enter the nucleus, but the double point mutant does (compare panel 2 to panel 3). Bars, 20 µm.
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Microinjection of the 5IAF-labeled wild-type HMGN1 protein or of the negatively charged, double mutant HMGN1S20,24E protein into the cytoplasm of intact mouse embryonic fibroblasts indicates that both proteins enter into and are retained in the nucleus. High-molecular-weight dextran tagged with Texas red which was coinjected with the proteins remains in the cytoplasm, an indication that the nuclear membrane of the injected cells is intact and prevents the nuclear entry of large molecules lacking NLSs (Fig. 3A). We found that the nuclear entry of phosphorylated proteins cannot be studied by this approach, because the microinjected proteins are rapidly dephosphorylated by the cytoplasmic phosphatases. We conclude, however, that negative charges do not prevent the entry of the protein into the nucleus.
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FIG. 3. Negative charges in the HMGN NBD do not inhibit nuclear import. (A) Fluorescence microscopy of mouse embryonic fibroblasts injected with solutions containing fluorescently labeled (green) wild-type or mutant HMGN1 and high-molecular-weight dextran labeled with Texas red. The dextran remains in the cytoplasm, while both proteins enter the nucleus. (B) Confocal laser scanning fluorescence microscopy visualizing the location of either the DNA or the transfected proteins in HmgN1-/- mouse fibroblasts. The proteins expressed in the various cells are indicated in the figure. Since the endogenous protein is not expressed in these cells, the transfected protein was visualized by indirect immunofluorescence with antibodies specific to HMGN1. Note that the wild-type protein is evenly distributed throughout the interphase nucleus, while the double mutant with a negatively charged NBD forms aggregates (white arrows). Bars, 20 µm.
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Immunofluorescence analysis of HmgN1-/- fibroblast cultures transfected with plasmids expressing either wild-type human HMGN1 (Fig. 3B), the HMGN1S20,24E double mutant (Fig. 3B), or the HMGN1S6,20,24A triple mutant indicate that all the proteins enter the nucleus. As expected, the plasmid did not transfect all of the cells; therefore, part of the HmgN1-/- fibroblasts did not produce a green fluorescent signal (red nuclei in the merge column). In transfected interphase cells, all the proteins were found exclusively in the nucleus. However, whereas the wild-type HMGN1 mutant protein was evenly dispersed throughout the nucleus (Fig. 3A), the HMGN1S20,24E mutant was unevenly dispersed and formed aggregates (Fig. 3B, middle row), suggesting that the intranuclear organization of this negatively charged double mutant is different from that of the wild-type HMGN1. As expected, in mitosis, the negatively charged double mutant does not bind to chromosomes (33).
The major site of interaction of HMGN with chromatin is their NBD (8). To test whether mutations in the NBD of HMGN1 alters the intranuclear organization of the protein in living cells, we visualized the locations of HMGN1-GFP fusion proteins expressed in growing HeLa cells. Whereas wild-type HMGN-GFP is unevenly dispersed throughout the entire nonnucleolar space in the nucleus, the negatively charged double mutant HMGN1S20,24E-GFP and the negatively charged single mutant HMGN1S20E-GFP localized mainly to the nucleolus (Fig 4A). Immunofluorescence analysis of fixed cells with antibodies to B23 which specifically stain the nucleoli verified that the double point mutant HMGN was localized in the nucleoli. The triple mutant HMGN1S6,20,24A-GFP, whose nucleosome binding ability is partially impaired (not shown), was also altered, and the protein was found throughout the entire nucleus, including the nucleoli. These studies suggest a direct link between the chromatin binding ability and the intranuclear location of HMGN proteins and provide additional support for the conclusion that interphase nuclei do not contain significant levels of phosphorylated proteins.
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FIG. 4. Mislocalization of negatively charged HMGN1 mutants. Wild-type HMGN1 and GFP-labeled HMGN1 mutant proteins expressed in HeLa cells are shown. The type of GFP-labeled protein is indicated in the various panels. Note that wild-type HMGN1 is distributed throughout the entire nonnucleolar space in the nucleus (a and b). The negatively charged HMGN1S20,24E mutant is efficiently expressed in and enters the nucleus in all the HeLa cells (c and f). This double point mutant mislocalizes to the nucleolus (f), as does the single point mutant (g). The triple mutant HMGN1S6,20,24A, which is not negatively charged, is distributed throughout the entire nucleus (h). The nucleolar localization in living cells was independently verified by immunofluorescence with anti-B23 using fixed cells (cells expressing wild-type protein [d and e] and cells expressing mutant HMGN1 [i and j]). n, nucleolus. Bars, 20 µm (b and j) and 50 µm (c). (B) FRAP analysis of the intranuclear mobility of the wild-type (WT) HMGN1 and single point mutant HMGN1S20E. Note that the fluorescence recovery of the mutant is faster than that of the wild type, indicating that the mutant is more mobile.
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The negative charge in the NBD affects the chromatin interaction and the intranuclear distribution, but not the nuclear entry of HMGN proteins. Taken together, the data suggest that inhibition of nuclear import is due to the presence of phosphorylated serine residues and not to the functional disruption of the bipartite NLS by the negative charges. We also note the absence of fluorescent signal in the cytoplasm of cells expressing the HMGN-GFP fusion proteins (Fig. 3B and 4A). Thus, although the mutated proteins cannot bind to nucleosomes and mislocalize to the nucleolus, they are retained within the nucleus and are not exported into the cytoplasm.
protein.
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, 14.3.3
, or 14.3.3
isoform. After extensive washing, the beads were treated with a buffer containing SDS and ß-mercaptoethanol, thereby releasing the 14.3.3 proteins and other bound molecules from the immobilizing support. The released proteins were fractionated by electrophoresis in SDS-containing polyacrylamide gels. Coomassie blue staining of the gels indicates that the various slurries contained equal amounts of the14.3.3 isoforms, while the results of Western analysis indicate that a significant amount of HMGN1 protein was retained only when the phosphorylated protein was specifically bound by the 14.3.3
isoform (Fig. 5B). The trace amount of HMGN1 present in all the lanes is additional proof that equal amounts of proteins were loaded on the gels and that 14.3.3
and 14.3.3
do not preferentially bind phosphorylated HMGN1. The GST control columns also bound only traces of HMGN1 (not shown). Western analysis with antibodies to phosphorylated proteins (anti-NBD2P) verified that the HMGN1 protein eluted from the 14.3.3
beads was phosphorylated (Fig. 5B, lanes 6).
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FIG. 5. Specific binding of phosphorylated HMGN1 (HMGN1-P) to 14.3.3 . (A) Polyacrylamide gel analysis of the starting materials, applied to the affinity columns. The SDS-polyacrylamide gels demonstrate that the solutions contained equal amounts of protein. (B) Analysis of the eluates from the 14.3.3 affinity columns. Either nonphosphorylated or PKC-phosphorylated HMGN1 was added to the GST-14.3.3 isoforms indicated. Coomassie blue staining of SDS-polyacrylamide gels of the eluates indicates that each fraction contained equal amounts of 14.3.3 protein. The results of Western analysis indicate a specific interaction between phosphorylated HMGN1 (HMGN1-P) and 14.3.3 . Equal trace amounts of HMGN1S20,24E bound to agarose beads containing 14.3.3 or GST (lanes 7 and 8). The HMGN1S6,20,24A mutant also does not bind to 14.3.3 (lanes 9 and 10).
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and incubated the double point mutant HMGN1S20,24E with either control gluthatione agarose beads or with the same beads containing the immobilized 14.3.3
isoform. The HMGN1S20,24E mutant did not bind to either of the beads (Fig. 5B, lanes 7 and 8), indicating that the negative charge by itself is not sufficient to facilitate specific interaction between HMGN1 and 14.3.3
proteins. Therefore, we conclude that the interaction between HMGN1 and the 14.3.3
isoform is specific to the phosphorylated form HMGN1 and is not due to a nonspecific negative charge effect. Thus, phosphorylation of the NBD of HMGN1 leads to inhibition of nuclear import and promotes interactions with 14.3.3
protein. HMGN1 is associated with 14.3.3 in mitotic HeLa cells. The NBD of HMGN protein is phosphorylated only during mitosis (33). Therefore, to test whether HMGN1 proteins are indeed associated with 14.3.3 proteins in vivo, we isolated HMGN1-associated proteins from cells that were growing logarithmically or were arrested in mitosis. To facilitate the isolation of HMGN1-associated proteins, we first generated HeLa cells stably expressing FLAG-tagged HMGN1 and used affinity chromatography on columns containing FLAG antibodies to separate the tagged HMGN1 proteins from the cell extracts. The results of Western analysis with antibodies specific to HMGN1 indicate that the levels of the FLAG-tagged HMGN1 protein were approximately equal to those of the endogenous protein. The affinity columns efficiently purified the FLAG-tagged HMGN1 protein from both logarithmically growing and mitotic cells (Fig. 6A, blot 7). The equal intensity of the signal obtained from the Western analyses verified that equal amounts of HMGN1 proteins were loaded on and recovered from the affinity columns.
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FIG. 6. Coimmunoprecipitation reveals preferential associations of HMGN1 with specific isoforms of 14.3.3 proteins in mitotic cells. (A) Total cell extracts (C.E.) prepared from control cells (C), from logarithmically growing cells expressing FLAG-tagged HMGN1 (L), or from mitotic cells expressing the FLAG-tagged HMGN1 (M) were treated with immobilized anti-FLAG antibodies ( -FLAG). Lanes L* and M* contain extracts not treated with phosphatase inhibitors and the mitotic HMGNs are not phosphorylated. The proteins in the extracts (C.E.) and the materials bound to the affinity column (IP: -FLAG) were fractionated by SDS-PAGE, and the contents of the various 14.3.3 isoforms were visualized by immunoblotting with specific antibodies. The antibodies used to develop the blots are indicated on the right under the 14.3.3 heading. Each of the three C.E. lanes, lanes C, L, and M, contained 5 µg of cell extract. In the IP: -FLAG lanes, each lane contained 1/40th of the material recovered from the affinity columns. Each strip is a separate gel. The lowest strip shows a Western blot with anti-HMGN1 antibody, demonstrating the relative levels of HMGN1 and FLAG-HMGN1 in the cells. IP, immunoprecipitation. (B) Quantification of the relative enrichment of the signal obtained with the various anti-14.3.3 antibodies. In each case, the signal obtained with the FLAG-bound proteins from the logarithmically growing cells (L) was set at 1.0 (dotted line). In the mitotic cell preparation (M), about 65% of the cells were in metaphase.
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are bound to the protein extracted from either logarithmically growing or mitotic cells (Fig. 6A, lanes L* and M*). Compared to logarithmically growing cells, the amount of 14.3.3
associated with HMGN1 during mitosis increased fivefold, that of 14.3.3ß increased threefold, and that of 14.3.3
increased 2.7-fold, a total increase of 10.7-fold. Our finding that 14.3.3
is the major isotype that interacts with HMGN1 is in full agreement with the in vitro binding assay results (Fig. 6B). Considering that under our synchronization conditions, only approximately 70% of the cells were in mitosis and that in the logarithmically growing cell culture approximately 5% of the cell were in mitosis (33), we estimate that the total increase in 14.3.3 proteins associated with HMGN1 during mitosis is more than 16-fold over that in logarithmically growing cells. Thus, mitotic phosphorylation of the NBD of HMGN promotes binding of 14.3.3 proteins. |
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isoform of 14.3.3 proteins. Second, the HMGN1S20,24E mutant that contains the same negative charges as the phosphorylated proteins does not bind to the 14.3.3
proteins, an indication that the HMGN1-14.3.3
interaction requires the presence of a phosphorylated NBD. Third, immunoprecipitation experiments with cell extracts reveal specific interactions between HMGN and 14.3.3 proteins in extracts from cells in mitosis, the phase in the cell cycle in which the HMGN1 proteins are highly phosphorylated (33). Significantly, 14.3.3
is the major isoform that interacts with HMGN1 in vivo, providing further support for the in vitro binding assays and for the specificity of the interaction. It is well documented that the various isoforms of 14.3.3 proteins interact with and regulate the cellular locations of numerous proteins, thereby affecting many cellular processes, including cell division, cell signaling, and apoptosis (10, 39). Our studies are the first to report that 14.3.3 proteins interact with structural proteins that are known to directly affect the structure of the chromatin fiber. A role for 14.3.3 proteins in regulating the transcriptional activity of chromatin has already been suggested by the finding that the interaction of 14.3.3 with histone deacetylases (HDACs) sequesters the proteins in the cytoplasm, while loss of this interaction translocates the HDACs into the nucleus and enhances transcriptional repression, presumably due to enhanced histone deacetylation (10, 13, 40). Similarly, by sequestering the transcriptional regulator RSG in the cytoplasm, 14.3.3 proteins affect the endogenous amounts of gibberellins and regulate many aspects of plant development (18). In all these cases, the interaction of 14.3.3 with their protein partners is mediated by the recognition of specific phosphorylated serines. In this respect, the interaction of HMGN1 protein with 14.3.3 is similar in that it occurs only when the HMGN1 NBD is phosphorylated. Indeed, the sequence surrounding the phosphorylated serines in this NBD corresponds to a known 14.3.3 binding element (10). A significant difference between the HMGN proteins and the chromatin-modifying activities, such as HDAC, is that the HMGN proteins are always found in the nucleus, while the other activities are known to shuttle between the nucleus and cytoplasm.
During mitosis, the NBD of HMGN is phosphorylated, and the negative charge abolishes their ability to bind to nucleosomes (33). Since the 14.3.3 binding module of HMGN proteins is their NBD, this interaction could serve as an additional mechanism for preventing the interaction of HMGN with chromosomes, a novel role for 14.3.3 in regulating cellular activities. In addition, 14.3.3 may also retard the reentry of HMGN into the newly formed nucleus in late telophase.
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View this table: [in a new window] |
TABLE 1. Uncoupling the effect of negative charge from that of phosphorylation
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FIG. 7. Model of the effect of mitotic phosphorylation on the chromatin interaction and intracellular trafficking of HMGN proteins. In the interphase nucleus, nonphosphorylated proteins are found either associated with nucleosomes or in the nucleoplasm. In mitotic cells, the NBDs of most of the HMGN proteins are phosphorylated. The phosphorylated protein is not bound to chromosomes and can form a complex with 14.3.3. At the end of mitosis, the phosphorylated protein is temporarily sequestered in the cytoplasm by its association with 14.3.3 protein. Nuclear entry is associated with dephosphorylation of the NBD. HMGN-P, phosphorylated HMGN.
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The interaction of HMGN with 14.3.3 also sequesters the proteins in the cytoplasm until the nuclear membrane is fully formed, prior to the onset of nuclear import activity (14). It may be significant that the serine residues affecting nuclear import are the same as those affecting chromatin interaction. By preventing nuclear entry until the chromatin is fully remodeled for the next round of transcription, phosphorylation of the conserved serine residues in the NBD of HMGN provides a tight link between nuclear import and transcription from chromatin templates.
Since numerous regulatory proteins such as SWI/SNF (29, 37), TFIID (36) Oct I (35), cJun (1), Sp1 (27) and HMGs (34) are phosphorylated and displaced from chromatin during mitosis (2, 12) and since phosphorylation affects nuclear import (2, 17, 19, 41), it is likely that the results presented here are of general relevance to understanding the functional effects of mitotic phosphorylation on the intracellular trafficking of nuclear proteins.
We thank H Piwnica-Worms (Washington University) for a gift of GST-14.3.3 bacterial expression vectors and Yaffa Rubinstein for constructive criticisms of the manuscript.
Part of this work was supported by grant HO 1804/2 from the Deutsche Forschungsgemeinschaft to R.H.
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