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Molecular and Cellular Biology, December 2002, p. 8278-8291, Vol. 22, No. 23
0270-7306/02/$04.00+0 DOI: 10.1128/MCB.22.23.8278-8291.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.
Division of Pediatric Oncology, Johns Hopkins University, Baltimore, Maryland
Received 30 May 2002/ Returned for modification 19 August 2002/ Accepted 26 August 2002
| ABSTRACT |
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-helical rod domain of smooth muscle myosin heavy chain (SMMHC). We generated Ba/F3 hematopoietic cells expressing a CBFß-SMMHC variant lacking 28 amino acids homologous to the assembly competence domain (ACD) required for multimerization of skeletal muscle myosin. CBFß-SMMHC(
ACD) multimerized less effectively than either wild-type protein or a variant lacking a different 28-residue segment. In contrast to the control proteins, the
ACD mutant did not inhibit CBF DNA binding, AML1-mediated reporter activation, or G1 to S cell cycle progression, the last being dependent upon activation of CBF-regulated genes. We also linked the CBFß domain to 149 or 83 C-terminal CBFß-SMMHC residues, retaining 86 or 20 amino acids N-terminal to the ACD. CBFß-SMMHC(149C) multimerized and slowed Ba/F3 proliferation, whereas CBFß-SMMHC(83C) did not. The majority of CBFß-SMMHC and CBFß-SMMHC(149C) was detected in the nucleus, whereas the
ACD and 83C variants were predominantly cytoplasmic, indicating that multimerization facilitates nuclear retention of CBFß-SMMHC. When linked to the simian virus 40 nuclear localization signal (NLS), a significant fraction of CBFß-SMMHC(
ACD) entered the nucleus but only mildly inhibited CBF activities. As NLS-CBFß-SMMHC(83C) remained cytoplasmic, we directed the ACD to CBF target genes by linking it to the AML1 DNA binding domain or to full-length AML1. These AML1-ACD fusion proteins did not affect Ba/F3 proliferation, in contrast to AML1-ETO, which markedly slowed G1 to S progression dependent upon the integrity of its DNA-binding domain. Thus, the ACD facilitates inhibition of CBF by mediating multimerization of CBFß-SMMHC in the nucleus. Therapeutics targeting the ACD may be effective in acute myeloid leukemia cases associated with CBFß-SMMHC expression. | INTRODUCTION |
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subunits, CBF
1/AML3/RUNX2, CBF
2/AML1/RUNX1, or CBF
3/AML2/RUNX3, and a common CBFß subunit (3, 14, 21, 35, 50). The CBF
subunits contact the consensus DNA binding site, 5'-(Pu)ACCPuCA-3', via their 127-amino-acid Runt homology domains (3, 30). CBFß does not bind DNA but increases the DNA affinity of the CBF
subunits via allosteric interaction with the Runt domain (36, 47, 50). Amino acids 1 to 137 of the 182-residue CBFß are sufficient for increasing the DNA affinity of CBF
subunits (16, 19).
CBFß is widely expressed, whereas AML1 is largely restricted to hematopoietic cells (43, 50). Mice lacking AML1 or CBFß do not develop definitive hematopoiesis (33, 37, 42, 51). A role for AML1 during maturation of pluripotent stem cells along the lymphoid and myeloid lineages has been inferred from its ability to transactivate promoters of lineage-restricted genes (34, 41, 46, 58). AML1 possesses only weak intrinsic transactivating potential but cooperates with additional transcription factors to activate genes in hematopoietic cells (7, 40, 46). AML1 is found in the cell nucleus, whereas the large majority of CBFß is cytoplasmic, reflecting its expression in excess of CBF
and its affinity for the actin cytoskeleton (26, 48).
Chromosomal and mutational abnormalities affecting the genes encoding AML1 and CBFß are common in acute leukemia cases (14). CBFß-SMMHC, encoded by inv(16) (p13;q22) or t(16;16) (p13;q22) in 8% of acute myeloid leukemias, inhibits CBF activities via its interactions with AML1 (9, 10, 22, 23). In contrast, AML1-ETO, another CBF oncoprotein, directly represses AML1 target genes (31).
The phenotypes of AML1-ETO and CBFß-SMMHC knock-in mice are similar to those lacking AML1 or CBFß, indicating that these oncoproteins interfere with CBF activities in vivo (11, 38, 57). A direct role for CBFß-SMMHC in the formation of human acute myeloid leukemias can be inferred from the formation of acute myeloid leukemias in chimeric mice exposed to ethylnitrosourea (12).
In addition to stimulating differentiation, CBF is require for the G1 to S transition in 32D cl3 myeloid and Ba/F3 lymphoid cells (9, 25). Deletion of 11 N-terminal CBFß residues required for interaction with AML1 prevents CBFß-SMMHC from slowing Ba/F3 proliferation, and exogenous AML1 accelerates G1 progression via transactivation (4, 10, 25, 45). Exogenous AML1, cdk4, cyclin D2, and c-Myc prevent CBFß-SMMHC from slowing Ba/F3 proliferation (5, 25). During leukemogenesis, genetic alterations which accelerate G1 may potentiate expression of CBFß-SMMHC, enabling increased blockade of differentiation. Consistent with this model, deletion of the overlapping p16INK4A and p19ARF genes or expression of E7 cooperates with CBFß-SMMHC or TEL-AML1 to induce acute leukemia in mice (6, 56).
In CBFß-SMMHC, the majority of CBFß is linked to the rod domain of smooth muscle myosin heavy chain (SMMHC) (Fig. 1A). The SMMHC rod domain is
-helical and consists of 28 related amino acid regions. Each of these regions contains four heptads in which the a and d residues are often hydrophobic. As a result, the rod domain has a hydrophobic face which mediates dimerization. The other face of the
-helix has alternating positively and negatively charged zones and mediates staggered multimerization (55). Alternative RNA splicing leads to the expression of two CBFß-SMMHC isoforms, which have either an 8- or a 42-amino-acid nonhelical, C-terminal tailpiece (32).
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-helical segment containing the ACD multimerized in vitro, whereas a 145-amino-acid segment did not (44). Thus, even with the ACD intact, a minimal length of
-helical coiled coil is required for multimerization of the myosin rod.
CBFß-SMMHC multimers compete with CBFß for interaction with AML1, potentially sequestering AML1 away from chromatin (9, 23). As AML1:CBFß-SMMHC monomeric and multimeric complexes retain DNA binding activity, CBFß-SMMHC may also be capable of directly repressing CBF-regulated genes. To ascertain whether multimerization is essential for inhibition of CBF activities, we expressed several CBFß-SMMHC variants from the zinc-responsive metallothionein (MT) promoter in Ba/F3 cells. Herein we refer to the shorter isoform of CBFß-SMMHC as INV and to the splice variant with a longer C-terminal, nonhelical tail as INVa. Deletion of the ACD homology domain from INV or INVa inhibited multimerization. In contrast to INV, INV(
ACD) and INVa(
ACD) were predominantly cytoplasmic and were defective for inhibition of CBF-mediated transactivation of a reporter gene and of endogenous genes required for G1 to S cell cycle progression.
We also expressed internal deletion variants linking the CBFß domain to either 149 or 83 C-terminal SMMHC residues. The former multimerized, entered the nucleus, and slowed proliferation, whereas the latter did not. When INV was directed to the nucleus with a simian virus 40 nuclear localization signal (NLS), deletion of the ACD still largely prevented inhibition of CBF activities. As the NLS did not localize CBFß-ACD fusion proteins to the nucleus, we linked the ACD to AML1 or to the AML1 DNA binding domain. In contrast to AML1-ETO, AML1-ACD proteins did not inhibit CBF-regulated genes. These findings indicate that the ACD facilitates inhibition of CBF by enabling CBFß-SMMHC multimerization in the nucleus.
| MATERIALS AND METHODS |
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2-11) and pMT-CBFß(165) cells were rederived from DNA constructs described previously (10). A total of 15 µg of each DNA construct was linearized by ScaI digestion and electroporated into 5 x 106 Ba/F3 cells in ice-cold phosphate-buffered saline at settings of 250 mV and 950 µF. Stable transfectants were selected by limiting dilution in 96-well dishes in the presence of 1.2 mg total of G418 per ml. To induce the MT promoter, zinc chloride was added at 100 µM. Transient transfection was carried out with 293T cells, which were maintained in Dulbecco's modified Eagle's medium with 10% fetal calf serum; 8 x 104 cells were seeded in 30-mm dishes. The next day, 800 to 900 ng of plasmid DNA and 3 µl of Lipofectamine 2000 (Gibco-BRL) per sample were employed per the manufacturer's instructions. Luciferase assays were carried out 2 days later, as described previously (10). Viable cell counts were determined by enumerating cells which excluded trypan blue dye with a hemacytometer. For cell cycle analysis, cells in log phase were pulsed for 30 min with 30 µM bromodeoxyuridine and then analyzed as described previously (9).
Plasmid construction.
pMT-INV(
ACD) was constructed by ligating an oligonucleotide lacking the ACD coding sequences (amino acids 515 to 542) between a PstI site 57 bp upstream of the ACD coding segment and a PstI site located 3 bp downstream. In this construct, only the N-terminal glycine of the 29-amino-acid ACD was retained (Fig. 1). pMT-INVa(
ACD) was prepared by transferring the ACD deletion with unique BglII and NcoI sites surrounding the ACD within both the INV and INVa cDNAs. pMT-INV(
BgX) was constructed by inserting an oligonucleotide between a BglII site located at bp 928 of the INV cDNA and an XhoI site located at bp 1028, leading to the deletion of a segment encoding amino acids 319 to 346.
pMT-INV(ß
2-11
ACD) and pMT-INV(ß
2-11
BgX) were constructed by transferring the ACD or BgX deletion, respectively, into pMT-INV(ß
2-11). INV(149C) was prepared by ligating an oligonucleotide between a StuI site located at bp 444 of the CBFß domain and an XhoI site located at bp 1287 of the INV cDNA. This oligonucleotide encodes all of the CBFß amino acids downstream of the StuI site and deletes a DNA segment encoding residues 166 to 428 of the INV cDNA. pMT-INV(83C) was constructed by ligating an oligonucleotide between the StuI site and a PstI site located at bp 1485. This oligonucleotide encodes all of the CBFß amino acids present in INV and downstream of the StuI site and deletes a DNA segment encoding residues 166 to 494 of the INV cDNA.
An oligonucleotide encoding the simian virus 40 nuclear localization signal (NLS) was linked upstream of the cDNA encoding INV and its variants as described previously (10). DNA segments encoding either 83 C-terminal INV residues (83C) or 121 C-terminal INV(
ACD) residues (149C
ACD) were linked to the human AML1 DNA binding domain (DBD) with a linker oligonucleotide joining either a SmaI site (for AML1-DBDa) or a BamHI site (for AML1-DBDb) to a PstI site in the INV cDNA or to an XhoI site in the INV(
ACD) cDNA. The 83C and 149C
ACD coding segments were also used to replace the estrogen receptor (ER) segment in AML1-ER, taking advantage of an MluI site that we had positioned just downstream of the AML1B cDNA segment (25), to generate AML1-83C and AML1-149
ACD.
pMT-AML1-ETO was generated by transferring the AML1-ETO cDNA from pCMV-AML1-ETO (kindly provided by S. Hiebert) into pMTCB6. pMT-AML1ETOmDBD was generated by ligating the oligonucleotide obtained by annealing 5'-AGCTCCGGTACCCCAGAT-3' and 5'-AGCTATCTGGGGTACCGG-3' into the HindIII site present in the AML1 DNA binding domain of AML1-ETO. Each construct prepared with a synthetic oligonucleotide was sequenced to confirm that the inserted base pairs were those expected. p(CBF)4TKLUC, containing four CBF-binding sites from the myeloperoxidase gene, pCMV-AML1B, and pCMV-INV have been described (10). Additional cytomegalovirus (CMV) expression vectors were constructed by replacing the INV cDNA with the respective INV, NLS-INV, or AML1-INV variant cDNA.
Western blotting, indirect immunofluorescence, and gel shift assay. Total cellular extracts corresponding to 106 cells were subjected to Western blotting with rabbit anti-CBFß antiserum and mouse antiactin antibody, as described previously (25). Antisera specific for AML1B residues 59 to 77 and the INV C-terminal tailpiece were kindly provided by H. Drabkin and R. Adelstein, respectively. Filters were stripped between antibodies as described previously (9).
For analysis of nuclear versus cytoplasmic protein expression, cells exposed to zinc overnight were washed twice with ice-cold phosphate-buffered saline and resuspended on ice in a buffer containing 50 mM KCl, 10 mM HEPES (pH 6.5), 2 mM MgCl2, 0.5 mM dithiothreitol, 2 mM benzamidine, 0.5 mM spermidine, and 0.4 mM phenylmethylsulfonyl fluoride plus 10 µg of leupeptin, 1 µg of pepstatin A, 1 µg of antipain, 1 µg of chymostatin, 2 µg of soybean trypsin inhibitor, and 10 µg of aprotinin per ml. After 5 min, NP-40 was added to 0.1% (vol/vol). After an additional 5 min, the released nuclei were pelleted at 850 x g for 5 min at 4°C. The supernatants containing the cytoplasmic fractions were precipitated with 4 volumes of acetone at -20°C for at least 30 min, centrifuged at 2,000 x g for 15 min, and resuspended in Laemmli sodium dodecyl sulfate sample buffer. The nuclear pellet was washed and then also resuspended in Laemmli sample buffer.
For the gel shift assay, nuclei were prepared with DR-A buffer (10 mM KCl, 10 mM HEPES [pH 7.9], 1 mM dithiothreitol, 1 mM MgCl2, and the above-listed protease inhibitors), and the nuclei were extracted with DR-C buffer (420 mM NaCl, 20 mM HEPES [pH 7.9], 25% glycerol, 1.5 mM MgCl2, and 0.2 mM EDTA) for 30 min at 4°C. The extract was then collected at 16,000 x g for 15 min, aliquoted, snap frozen in liquid nitrogen, and stored at -80°C. Gel shift assay with a 32-bp probe derived from the myeloperoxidase gene and containing a CBF-binding site and oligonucleotide competition with a 50-fold excess of a wild-type probe or of a probe carrying clustered point mutations in the CBF-binding site were carried out as described previously (9). Indirect immunofluorescence on cytospun Ba/F3 cell lines, with a CBFß antiserum, was also carried out as described previously, with the addition of 0.2 µg of 4',6'-diamidino-2-phenylindole (DAPI) per ml into the glycerol overlay (9). Cells were visualized by fluorescent microscopy at x60.
Multimerization assay. We employed a procedure similar to that used to assess sarcomeric myosin multimerization (44). From 40 x 106 to 50 x 106 Ba/F3 cells expressing INV or its variants were exposed to zinc for 2 days and then lysed by exposure on ice to 2 ml of 300 mM KCl-10 mM HEPES (pH 6.5)-2 mM MgCl2-0.5 mM dithiothreitol-0.1% NP-40, along with benzamidine, spermidine, phenylmethylsulfonyl fluoride, leupeptin, pepstatin, antipain, chymostatin, soybean trypsin inhibitor, and aprotinin as protease inhibitors. This salt concentration extracted the majority of INV from the cells.
To partially purify CBFß-SMMHC and its variants, the cell lysates were heated to 100°C for 15 min and then clarified by microcentrifuge centrifugation at 16,000 x g for 5 min. Then 0.5-ml aliquots of the lysate were dialyzed overnight at 4°C, with 12,000- to 14,000-Da exclusion 0.25-in. (ca. 1 cm) tubing (Gibco-BRL), against 50, 100, 200, or 300 mM KCl, HEPES (pH 6.5), 2 mM MgCl2, phenylmethylsulfonyl fluoride, benzamidine, and spermidine. The clear dialysates were collected by vigorous washing of the bags and ultracentrifuged at 100,000 x g for 1 h in polyallomer tubes (11 by 34 mm) filled with the corresponding dialysis buffer (Beckman). The supernatants were collected, leaving a small amount above the pellets, concentrated by acetone precipitation, and resuspended in sodium dodecyl sulfate sample buffer. The residual supernatants were removed, and the pellets were solubilized by exposure to 600 mM KCl-10 mM HEPES (pH 7.5)-0.5 mM dithiothreitol overnight at room temperature. The dissolved pellets were then diluted 1:1 with 10 mM HEPES (pH 7.5)-0.5 mM dithiothreitol and resuspended in 2x sodium dodecyl sulfate sample buffer. Samples corresponding to equivalent cell numbers were then subjected to Western blotting with the CBFß antiserum. Band intensities were quantified with NIH Image 1.62 software.
| RESULTS |
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ACD); 28 residues of the ACD homology region were deleted, rather than all 29, to maintain the repeat structure of the rod domain. As a control, 28 residues further upstream were deleted from INV, between nearby BglII and XhoI sites, to generate INV(
BgX). The locations of the ACD and BgX segments within INV are shown in Fig. 1A. These cDNAs were introduced into Ba/F3 cells downstream of the zinc-responsive MT promoter, and Western blotting was employed to identify subclones which produced the corresponding proteins (Fig. 2).
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ACD), and INV(
BgX) cell extracts prepared with a buffer containing 300 mM KCl were heated to 100°C for 15 min, clarified, and dialyzed overnight against a buffer containing either 50, 100, 200, or 300 mM KCl. The dialysates were then collected, with vigorous rinsing of the dialysis tubing, and subjected to ultracentrifugation at 100,000 x g for 1 h. The pellets were solubilized with a buffer containing 600 mM KCl, and the pellets and supernatants were analyzed by Western blotting with a CBFß antiserum (Fig. 3A). Densitometric analysis of these data are presented in Fig. 3B. At 50 mM KCl, INV(
ACD) was threefold more soluble than INV and twofold more soluble than INV(
BgX). If the extracts were not boiled, a procedure commonly employed to purify myosins and other proteins with coiled-coil domains (29), a significant nonspecific precipitate formed during dialysis, preventing distinction between multimerization and adherence to the precipitate. Nevertheless, INV(
ACD) was severalfold more soluble than the other two constructs under these conditions (not shown).
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subunit affects ACD-mediated INV multimerization, the ACD and BgX segments were deleted from INV(ß
2-11), which does not bind CBF
subunits due to lack of a 10-amino-acid CBFß segment whose location is indicated in Fig. 1A (10). These constructs were introduced into Ba/F3 cells, and the encoded proteins were analyzed for multimerization (Fig. 3C). Deletion of the ACD in this context again greatly reduced multimerization, and deletion of the BgX segment had an intermediate effect.
Thus, deletion of the ACD potently, and to some extent specifically, deters multimerization via the SMMHC domain. This conclusion was further supported by our findings, presented below, that deleting the ACD from INVa also prevented multimerization, that multimerization of both INV and INV(
BgX) was detected in a gel shift assay, and that deleting the ACD prevented nuclear localization, which may depend upon multimerization. Deleting the BgX segment altered INV multimerization to some extent in the ultracentrifugation assay; nevertheless, these results justify using INV
ACD to determine whether INV must multimerize to perturb CBF activities.
Deletion of ACD prevents INV from inhibiting CBF activities.
Nuclear extracts from parental Ba/F3 cells or lines expressing INV, INV(
BgX), or INV(
ACD) were subjected to the gel shift assay with a radiolabeled CBF binding site derived from the myeloperoxidase gene (Fig. 4A ). As shown previously, treatment with zinc did not affect CBF DNA binding in parental Ba/F3 cells but greatly reduced CBF DNA binding in INV cells while increasing the expression of a slowly migrating DNA binding species. The latter species likely represents multimeric INV bound to CBF
subunits and to DNA. Similarly, exposure of both INV(
BgX) lines to zinc markedly reduced CBF DNA binding and greatly increased binding of multimeric INV(
BgX) to the probe.
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ACD) cells to zinc did not generate a multimeric DNA binding species and either mildly reduced or did not reduce endogenous CBF DNA binding. As we will show below, this may reflect defective nuclear localization of INV(
ACD). Although the extract conditions might allow a portion of cytoplasmic INV(
ACD) to pellet with the nuclei during isolation, such polypeptides are apparently not detected by this gel shift assay, perhaps because they were not bound to CBF
subunits at the time of cell lysis.
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ACD) to disrupt AML1:CBFß DNA binding complexes predicts that INV(
ACD) will not interfere with CBF-mediated gene activation. We evaluated the affect of INV and its variants on AML1B-mediated gene activation with a transient-transfection assay. p(CBF)4TKLUC contains four CBF-binding sites derived from the myeloperoxidase gene, a TATAA homology and RNA initiation site derived from the herpes simplex virus thymidine kinase (TK) gene, and a luciferase (LUC) cDNA. AML1B is a prominent AML1 isoform and possesses a transactivation domain (3).
In 293T cells, pCMV-AML1B activated p(CBF)4TKLUC 4.5-fold, on average, with a range of 3.1- to 6.6-fold (not shown). INV, INV(
ACD), and INV(
BgX) each reduced the basal activity of p(CBF)4TKLUC about 1.6-fold. On the other hand, AML1B-induced activity of this reporter was reduced 8-fold by INV, 9-fold by INV(
BgX), and only 2-fold by INV(
ACD) (Fig. 4B). Thus, relative to background suppression in the absence of AML1B, INV(
ACD) or INV(
BgX) prevented AML1B transactivation, whereas INV(
ACD) was ineffective.
Gene activation by CBF is a prerequisite for optimal progression from G1 to S in Ba/F3 cells. Evaluating the affect of INV on endogenous CBF activities offers the advantage of greater in vivo relevance than transient-transfection assays. Therefore, we assessed cell cycle progression in Ba/F3 lines expressing INV or its derivatives as an indirect assay of endogenous CBF activities. Zinc did not affect the proliferation rate of parental Ba/F3 cells and slowed the accumulation of INV cells 3-fold over 72 h, of INV(
ACD) cells 1.2-fold on average, and of INV(
BgX) cells 2-fold (not shown).
The effect of zinc on the proportion of Ba/F3, INV, INV(
ACD)-1 and -2, and INV(
BgX)-1 and -2 cells in the S or G1 cell cycle phase is shown in Fig. 4C. Both INV and INV(
BgX) slowed the G1 to S progression similarly, increasing the G1/S ratio about 2.6-fold, whereas induction of INV(
ACD) for 2 days did not alter the G1/S ratio. These differences occurred even though ACD-1, ACD-2, BgX-1, and BgX-2 cells expressed exogenous protein at a level equal to or greater than that of INV cells (Fig. 2). Thus, INV and INV(
BgX) are able to multimerize, to inhibit CBF DNA binding, and to inhibit G1 progression, whereas deletion of the ACD interferes with each of these activities.
ACD is required for INVa to inhibit CBF activities.
Alternative splicing produces an isoform of INV, designated INVa, with a longer nonhelical tail (Fig. 1A). INVa is more abundant than INV in human acute myeloid leukemia blasts (24). As with INV, expression of INVa in Ba/F3 cells inhibits endogenous CBF DNA binding and slows G1 progression (10). As the ACD is very near the C terminus, its deletion might affect INVa differently than INV. We obtained Ba/F3 lines expressing INVa(
ACD) at levels similar to or higher than that of INVa (Fig. 5A). For comparison, this Western blot also included an extract from zinc-treated Ba/F3-MTINV cells.
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ACD) was assessed by ultracentrifugation (Fig. 5B). Deletion of the ACD from INVa interfered with its multimerization in 50 mM or 100 mM KCl. Nuclear extracts prepared from INVa and INVa(
ACD) cells cultured with and without zinc were subjected to the gel shift assay with a CBF DNA binding region from the myeloperoxidase gene (Fig. 5C). Induction of INVa reduced endogenous CBF DNA binding and increased binding by a slowly migrating species, whereas induction of INVa(
ACD) did not alter endogenous CBF DNA binding and only minimally increased binding by the slowly migrating, presumably multimeric species. Induction of INVa slowed Ba/F3 proliferation 4-fold over 3 days, whereas INVa(
ACD) only slowed cell proliferation 1.3-fold, on average (not shown). Consistent with these findings, INVa increased the G1/S ratio almost threefold, whereas INVa(
ACD) did not affect the relative proportion of cells in the G1 and S cell cycle phases (Fig. 5D). Multimerization via the C terminus of SMMHC is sufficient to inhibit CBF activities. We also generated Ba/F3 cell lines expressing INV variants in which the CBFß domain was linked to either 149 or 83 C-terminal SMMHC residues (Fig. 6A and 6B). Cells expressing the CBFß domain alone, CBFß(165), were rederived as described previously (10). The multimerization of INV(149C), INV(83C), and CBFß(165) was compared (Fig. 6C). INV(149C) retained the ability to multimerize at 50 or 100 mM KCl, whereas the large majority of INV(83C) and CBFß(165) remained in the supernatant at these salt concentrations. Nuclear extracts prepared from INV(149C) and INV(83C) cells cultured with and without zinc were subjected to the gel shift assay with a radiolabeled CBF DNA binding site (Fig. 6D).
Induction of INV(149C) strongly inhibited endogenous CBF DNA binding and led to the detection of a slowly migrating multimer and of a novel species (arrow). This novel species likely represents monomeric INV(149C) bound to endogenous CBF
subunits and to DNA; if it was a higher-order multimer, bands of other sizes would have been expected. The appearance of this novel species in this assay but not in the assay of wild-type INV suggests that INV(149C) has weakened multimerization potential, as was expected from its having only 141
-helical residues. A 50-fold excess of unlabeled wild-type probe (W) inhibited DNA binding by endogenous CBF and by the two species which appeared upon induction of INV(149C), whereas a 50-fold excess of the same oligonucleotide carrying clustered point mutations in the CBF binding site only mildly affected DNA binding by these three species.
In contrast to these findings and consistent with the ultracentrifuge multimerization assay, induction of INV(83C) did not alter endogenous CBF DNA binding or lead to the appearance of a multimeric gel shift species. INV(149C) inhibited activation of p(CBF)4TKLUC by AML1B 6-fold, on average, in 293T cells, whereas INV(83C) only inhibited activation by 2-fold (Fig. 4B). Induction of INV(149C) slowed cell proliferation 2.5-fold over 72 h and inhibited G1 to S progression, whereas induction of INV(83C) did not affect cell accumulation or the proportion of cells in the G1 and S cell cycle phases (Fig. 6E and not shown). Thus, CBFß residues 1 to 165 linked to 149 C-terminal SMMHC residues retained the ability to multimerize and inhibit CBF activities, albeit less efficiently than intact CBFß-SMMHC.
Multimerization is required for INV nuclear localization.
Gel shift assay of Ba/F3-MTINV(149C) nuclear extracts generated a species of intermediate mobility likely representing monomeric INV(149C)-CBF
complexes, but similar assays of extracts containing INV(
ACD), INVa(
ACD), or INV(83C) did not. As each of these INV variants has reduced multimerization capacity compared with INV and INV(149C), we considered the possibility that multimerization is required for their nuclear localization and so their detection as complexes with CBF
in nuclear extracts.
Cytospins of parental Ba/F3 cells or Ba/F3 cells expressing INV, INV(
BgX), INV(
ACD), INV(149C), or INV(83C) were subjected to indirect immunofluorescence with a rabbit anti-CBFß antiserum (Fig. 7A ). Simultaneous DAPI staining (blue) localized the nucleus. In this assay, there is significant background staining, in part due to endogenous cytoplasmic CBFß. Nevertheless, INV, INV(
BgX), and INV(149C) were detected in the nuclei of the majority of the cells, whereas INV(
ACD) and INV(83C) were expressed predominantly in the cytoplasm.
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BgX), and INV(149C) was nuclear, whereas the majority of INV(
ACD), INVa(
ACD), and INV(83C) was cytoplasmic (Fig. 7C, top). Also, when cell fractionation was carried out in 100 mM KCl, the majority of INV and INVa still remained in the nuclear fraction (Fig. 7C, bottom). At this salt concentration, cytoplasmic INV and INVa almost certainly did not pellet artifactually with the nuclei due to multimerization. Thus, multimerization is required for the majority of INV to be retained efficiently in the nucleus.
We also evaluated the cellular localization of INV(ß
2-11) by Western blotting with extracts prepared in 100 mM KCl (Fig. 7C, bottom). The majority of this isoform was found in the nucleus, indicating that interaction with CBF
subunits is not necessary to initiate nuclear localization of INV.
ACD acts in the nucleus to allow CBFß-SMMHC to inhibit CBF.
In an effort to express a greater proportion of INV(
ACD) and INV(83C) in the nucleus, we introduced the simian virus 40 nuclear localization signal (NLS) at their N termini. As a control, the NLS was also linked to INV. These constructs were linked to the MT promoter and introduced into Ba/F3 cells. The presence of the NLS was confirmed by comparing the mobility of the encoded proteins with the corresponding proteins lacking the NLS (Fig. 8A ). Indirect immunofluorescent analysis demonstrated that NLS-INV and NLS-INV(
ACD) were nuclear in a large majority of the cells, whereas INV(83C) remained cytoplasmic in most cells (Fig. 7B). Western analysis of nuclear and cytoplasmic extracts indicated that 30 to 50% of the INV(
ACD) protein was now nuclear, whereas INV(83C) was cytoplasmic (Fig. 8B).
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ACD) subclones analyzed, exposure to zinc reduced endogenous CBF DNA binding severalfold and allowed detection of a monomeric gel shift species (arrow), while there was no increase in signal above background near the top of each lane. These findings stand in sharp contrast to those for INV(
ACD), which only minimally affected endogenous CBF and did not enter the nucleus and form a monomeric gel shift species.
As expected from its cellular localization, INV(83C) did not affect CBF DNA binding or produce a monomeric gel shift species. When transiently transfected into 293T cells, NLS-INV inhibited AML1B-mediated reporter activation 4.5-fold, on average, whereas NLS-INV(
ACD) and INV(83C) were less effective, inhibited activation 3.0- and 2.5-fold, respectively (not shown). The difference in activity between NLS-INV and NLS-INV(
ACD) was more evident when their effects on cell cycle progression mediated by endogenous CBF were assessed. NLS-INV inhibited proliferation 4- to 9- fold over 72 h, while NLS-INV(
ACD) and NLS-83C only inhibited cell accumulation 2-fold during this time period (not shown). Similarly, NLS-INV markedly inhibited G1 to S cell cycle progression, whereas NLS-INV(
ACD) and NLS-INV(83C) were largely ineffective (Fig. 8D). Thus, the ACD is required in the nucleus for INV to inhibit endogenous CBF activities.
ACD does not repress CBF target genes required for proliferation.
The failure of NLS-INV(83C) to enter the nucleus leaves open the possibility that the ACD enables INV to slow cell proliferation by directly attracting corepressors to CBF target genes rather than through its capacity to mediate INV multimerization. To address this issue, we linked the segment 83C, containing the ACD but too short to multimerize, to the AML1 DNA-binding domain, either residues 1 to 216 (AML1DBDa) or residues 1 to 290 (AML1DBDb) of AML1B. Segment 83C was also linked to the C terminus of full-length AML1B. As controls, 149 C-terminal residues from which the ACD had been deleted, 149C(
ACD), were also linked to AML1DBDb or AML1B. 149C(
ACD) was not capable of mediating multimerization when linked to CBFß (not shown). As a positive control, pMT-AML1-ETO was also introduced into Ba/F3 cells.
In AML1-ETO, residues 1 to 177 of AML1 are linked to the potent ETO corepressor. AML1-ETO was previously shown to inhibit G1 to S progression in hematopoietic cells (2, 8), but the dependence of this effect on interaction with AML1 binding sites has not been determined. To verify that our positive control acts on AML1 target genes, we introduced six amino acids between residues 145 and 146 of AML1-ETO's DNA-binding domain. These cDNAs are diagrammed in Fig. 9A . Each was introduced into Ba/F3 cells.
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| DISCUSSION |
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The ACD defined for the fast IId isoform of skeletal muscle myosin is highly conserved in other skeletal myosins, and smooth muscle and nonmuscle myosins have a less-related but still highly homologous sequence near their C termini (44). Our findings support the prediction that these segments also function as ACDs. Deletion of the SMMHC ACD from INV, INV(ß
2-11), INVa, and INV(149C) consistently increased solubility approximately 4-fold at 50 mM KCl and also increased solubility approximately 3-fold at 100 mM and 1.5-fold at 200 mM KCl in several assays. In comparison, deletion of the ACD from a skeletal myosin rod domain increased its solubility 8-fold at 50 or 100 mM KCl and 2-fold at 200 mM KCl (44). Although INVa was more soluble than INV, INV(ß
2-11) was even more soluble, suggesting that differences observed reflect assay variability.
Deletion of a more N-terminal, randomly selected 28-amino-acid segment had less effect on solubility in low KCl concentrations and did not alter detection of multimers in the gel shift assay. Consistent with our findings, an antibody specific for the C terminus of the coiled-coil domain of turkey smooth muscle myosin prevents and even reverses multimerization (18). Questions remain regarding the biophysical interactions and mechanistic steps which mediate myosin multimerization. As SMMHC multimerizes in a staggered, antiparallel manner (54), it will be of interest to identify the more N-terminal protein segment with which it interacts. A 63-residue "extended ACD" has more bulky aliphatic and fewer net acidic residues on its outer surface than the majority of the myosin rod and may contact a similar internal domain to initiate multimerization (13). Of note, deletion of the nonhelical tailpiece slowed but did not prevent multimerization of a nonmuscle myosin (17), the antibody capable of inhibiting turkey smooth muscle myosin multimerization does not interact with the tailpiece (18), and deletion of the tailpiece from INV did not affect its ability to multimerize and inhibit CBF activities in Ba/F3 cells (T. Kummalue, J. Lou, and A. D. Friedman., unpublished data).
Multimerization of INV is required for its optimal localization to the nucleus, reflecting the affinity of intermediate filaments for CBFß (48). We and others have previously observed INV in the nucleus of primary leukemic samples and Ba/F3 cells (9, 24), whereas CBFß-SMMHC is predominantly cytoplasmic in adherent cell lines, perhaps reflecting the presence of a greater number of intermediate filaments (1, 20, 49). Nuclear retention may require the formation of larger multimers which cannot easily exit the nucleus. Even though they have reduced capacity for multimerization in vitro, INV(
BgX) and INV(149C) apparently retained the ability to multimerize well enough in vivo to localize to the nucleus and inhibit CBF. Addition of an NLS to INV(
ACD) shifted the balance between these competing effects, perhaps because INV(
ACD) retains some capacity for multimerization, whereas addition of NLS did not allow entry of CBFß(83C) into the nucleus.
Monomeric INV(149C)-CBF
nuclear complexes likely were detected by the gel shift assay due to weakened multimerization, a consequence of its having only 141
-helical SMMHC residues. As INV(ß
2-11) was predominantly nuclear, affinity for CBF
subunits cannot account for nuclear retention of INV. Consistent with this conclusion, in Ba/F3 lines expressing INV(
ACD), approximately 30% of nuclear AML1 relocalized to the cytoplasm (not shown).
Deletion of the ACD reduced the ability of INV, INVa, and NLS-INV to inhibit CBF DNA binding and transactivation and obviated their ability to inhibit CBF-mediated G1 to S cell cycle progression. This disruption of INV activities likely resulted from reduced multimerization capacity, as the ACD domain has evolved to mediate this activity. It is also possible that the ACD directly mediates transrepression by CBF
-INV complexes bound to CBF-binding sites in chromatin, as both endogenous mSin3a and exogenous HDAC8 bind INV in Cos7 cells dependent upon the presence of the ACD (K. L. Durst, B. Lutterbach, T. Kummalue, A. D. Friedman, and S. W. Hiebert, submitted for publication).
To address this issue, we expressed AML1DBDa-83C, AML1DBDb-83C, and AML1-83C, which link the ACD and surrounding residues to the AML1 DNA-binding domain or to full-length AML1B. In contrast to AML1-ETO, which dramatically slowed Ba/F3 G1 progression dependent upon the integrity if its DNA-binding domain, these fusion proteins were essentially inactive when expressed at severalfold higher levels than AML1-ETO. We therefore propose that loss of multimerization potential rather than loss of interactions with heterologous proteins accounts for the inability of INV(
ACD) and INVa(
ACD) to inhibit CBF activities in Ba/F3 cells. Weakened multimerization capacity also explains the inability of an INVa isoform lacking 95 C-terminal residues, including the ACD, to transrepress the p21 promoter in cooperation with AML1 (28). On the other hand, AML1-ETO binds several corepressors simultaneously (15, 27, 53), and so it remains possible that intact and/or multimeric INV binds mSin3a or another corepressor with greater affinity than an isolated, monomeric ACD domain.
Our investigations do not directly address how nuclear INV multimers inhibit CBF. In the absence of the ACD, INV remains capable of heterodimerizing with CBF
subunits, and this complex binds DNA, as confirmed by our detecting a monomeric CBF
-NLS-INV(
ACD) gel shift species. Gel shift analysis indicates that the majority of CBF
subunits are bound to these multimers, but whether this results in their sequestration away from CBF-regulated genes or whether CBF
-INV multimeric complexes directly repress gene expression by physically preventing interactions of positive regulators, by interaction with corepressors, or by a combination of these mechanisms remains to be elucidated.
Inhibition of INV multimerization may prove useful in the therapy of acute myeloid leukemia patients with inv(16) or t(16;16) mutations. A 28-amino-acid peptide corresponding to the SMMHC ACD did not perturb INV multimerization in vitro (data not shown). Further mechanistic investigations should assist efforts to identify a more effective reagent.
| ACKNOWLEDGMENTS |
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This work was supported by grant R01 HL15388 from the NIH to A.D.F. T.K. was supported by a grant from the Siriraj Hospital, Mahidol University. A.D.F. is a Leukemia and Lymphoma Society Scholar and is generously supported by the Children's Cancer Foundation.
| FOOTNOTES |
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