Previous Article | Next Article ![]()
Molecular and Cellular Biology, October 2003, p. 7177-7188, Vol. 23, No. 20
0270-7306/03/$08.00+0 DOI: 10.1128/MCB.23.20.7177-7188.2003
Copyright © 2003, American Society for Microbiology. All Rights Reserved.
and Yoshikuni Nagamine*
Friedrich Miescher Institute for Biomedical Research, Novartis Research Foundation, CH-4058 Basel, Switzerland
Received 12 June 2003/ Accepted 8 July 2003
| ABSTRACT |
|---|
|
|
|---|
| INTRODUCTION |
|---|
|
|
|---|
Steady-state levels of uPA and uPAR mRNAs and proteins in many cancer cells are high due in part to enhanced mRNA stability. In several breast cancer cell lines, such as MDA-MB-231, MDA-MB-436, and BT-549, uPA and uPAR mRNAs are very stable, with half-lives of longer than 10 h (50; H. Tran, unpublished data). This observation is interesting considering that the 3' untranslated region (UTR) of uPA and uPAR mRNAs contain AU-rich elements (AREs), sequences commonly found in the 3' UTR of mRNAs with short half-lives.
Regulation of mRNA stability through AREs is a posttranscriptional mechanism that allows cells to fine-tune the expression of important gene products under changing environmental conditions (see references 27 and 56 for reviews). ARE-containing mRNAs encode a wide variety of proteins with diverse functions (3). The most prominent group among them encode early-response gene products, including cytokines, lymphokines, and some proto-oncoproteins (33, 59). AREs are grouped into three classes depending on the absence or presence of the consensus AUUUA pentamer and on how multiple pentameric motifs are arranged within the ARE (11). The AREs of the uPA and uPAR mRNAs belong to the class I ARE, containing one or more nontandem copies of the pentamer motif. In addition, the ARE of the uPA mRNA contains AUUUUA and AUUUUUA motifs common to several cytokine AREs (59). mRNA-destabilizing activity associated with the AREs of uPA and uPAR has been reported (49, 63), but proteins that regulate the stability of these mRNAs through interaction with their AREs have not been identified.
Many ARE-binding proteins (AUBPs) have been identified, but to date HuR is the only AUBP whose functional role in stabilizing ARE-containing mRNAs has been demonstrated by several laboratories (13, 20, 21, 55, 64). Structurally, HuR consists of three RNA recognition motifs (RRMs), with RRM2 and RRM3 connected by a short linker or hinge region (43). HuR binds to the AREs of several mRNAs (9, 25), and in the case of the c-fos ARE, it recognizes a core element of 27 nucleotides that contains AUUUA, AUUUUA, and AUUUUUA motifs, all three of which are required for maximal binding (43). The stabilizing effect of HuR on ARE-containing mRNAs has been confirmed in vivo (13, 20, 55) and in cell-free mRNA decay systems using recombinant HuR and related Hu family proteins (21, 40). Although HuR is localized predominantly in the nucleus, it contains a shuttling sequence termed HNS in the hinge region (19) and is translocated to the cytoplasm under various conditions that positively affect the stability of ARE-containing mRNAs (66, 71). These observations have led to the hypothesis that the mRNA-stabilizing activity of HuR is closely linked to its cytoplasmic localization.
We and others have reported systems in which the stability and/or translation of labile ARE-containing mRNAs is enhanced by a mechanism involving the upregulation and activation of p38 mitogen-activated protein (MAP) kinase or its upstream effectors MKK3 and MKK6 (28, 35, 39, 46, 69). Mitogen-activated protein kinase-activated protein (MAPKAP) kinase 2 (MK2), which is phosphorylated and activated by p38, is implicated in cell migration (38) and in the coexport of p38 MAP kinase from the nucleus (17). More importantly, MK2 regulates the stability and/or translation of tumor necrosis factor alpha, cyclooxygenase 2, interleukin-6 (IL-6), IL-8, c-Fos, and granulocyte-macrophage colony-stimulating factor mRNAs through their AREs (37, 39, 51, 69). It is still not known whether HuR can be phosphorylated by one of these kinases or whether its function is under the control of a regulatory pathway involving p38 MAP kinase.
We show here that HuR binds to the AREs of uPA and uPAR mRNAs and that its overexpression stabilizes these mRNAs in the cell. We also propose a link between the activation of MK2 and the cytoplasmic accumulation of HuR, which would subsequently lead to the stabilization of ARE-containing mRNAs. This represents one possible mechanism by which the stress-activated p38 MAP kinase pathway, where MK2 is downstream of p38 MAP kinase, targets ARE-binding proteins to specifically stabilize ARE-containing mRNAs.
| MATERIALS AND METHODS |
|---|
|
|
|---|
ARE or ß-globin-Xho mRNA, ß-globin cDNA containing the uPA 3' UTR without the ARE or ß-globin-Xho was excised from pCMV-ß-globin
ARE or pCMV-ß-globin-Xho (50) with HindIII-SalI and inserted into the same restriction sites of pPuro-TRE Bluescript (provided by A. Thiele), which harbors a tetracycline-responsive element. pPuro-TRE-ß-globin-AREuPA and pPuro-TRE-ß-globin-AREuPAmut containing one copy of the ARE from human uPA mRNA and a mutated version of the ARE (both AUUUA motifs mutated to AGGUA), respectively, were prepared as above from the vectors pCMV-ß-globin-AREuPA and pCMV-ß-globin-AREuPAmut.
Cell culture and DNA/RNA transfection.
MDA-MB-231 cells were maintained in Dulbecco's modified Eagle's medium supplemented with 10% fetal calf serum at 37°C in the presence of 5% CO2. HeLa Tet-off cells (Clontech) were maintained as above and additionally supplemented with 100 ng of G-418 (Invitrogen) per ml. HeLa Tet-off cells were stably transfected with pPuro-TRE-ßglobin-Xho, pPuro-TRE-ßglobin-AREuPA, pPuro-TRE-ßglobin-AREuPAmut, and pPuro-TRE-ßglobin-
AREuPA by the calcium phosphate precipitation method (Pharmacia) and selected with puromycin (2 µg/ml). Puromycin-resistant clones were pooled, and ß-globin mRNA expression was analyzed by Northern blotting. BT-549 cells were maintained in RPMI 1640 medium supplemented with 10% fetal calf serum. Transient transfection of plasmid DNA (2 µg per 35-mm dish) using LipofectAMINE 2000 (Invitrogen) was performed as specified by the manufacturer. Transfection of small interfering RNA (siRNA) duplexes was performed as described previously (34). The sequence of siRNA used to target HuR correspond to nucleotides 150 to 168 in human HuR mRNA (where nucleotide 1 is the AUG start codon) and includes a 3' UU overhang: sense (5'-CUU AUU CGG GAU AAA GUA GUU-3') and antisense (5'-CUA CUU UAU CCC GAA UAA GUU-3'). The siRNA sequence homologous to luciferase mRNA has been described previously (34).
Measurement of mRNA stability in HeLa Tet-off cells and Northern blotting.
Synthesis of ß-globin mRNA in HeLa Tet-off cells was stopped by the addition of 1 µg of doxycycline (tetracycline analogue) per ml. Total RNA was isolated from cells at different times after the addition of doxycycline and subjected to Northern blotting. For analysis of endogenous uPA and uPAR mRNA stability, total RNA was isolated at different times following the addition of 20 µg of 5,6-dichloro-1-ß-D-ribofuranosylbenzimidazole (DRB; Fluka) per ml. A 10-µg portion of total RNA for each time point was resolved on a 1% formaldehyde-agarose gel and transferred to a nylon membrane (Roche). RNA blots were stained with methylene blue to check for equal loading and transfer. Hybridization was performed by the QuikHyb hybridization protocol (Stratagene) using random primed [
-32P]dATP-labeled rabbit ß-globin cDNA probe or cDNA probes corresponding to human uPA or uPAR and human glyceraldehyde 3-phosphate dehydrogenase (GAPDH). Hybridization signals were visualized and quantitated with a PhosphorImager (Molecular Dynamics).
Protein extraction, immunoprecipitation, and Western blotting. Adherent cells were washed with phosphate-buffered saline (PBS) and incubated in lysis buffer (50 mM Tris-HCl [pH 7.4], 120 mM NaCl, 1% NP-40, 1 mM EDTA, 5 mM Na3VO4, 5 mM NaF, 0.5 µg of aprotinin per ml, 1 µg of leupeptin per ml) on ice for 10 min. Cells were collected by scraping and centrifuged at 20,500 x g for 10 min at 4°C. Typically, 10 µg of total protein from the supernatant (whole-cell lysate) was separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to a nitrocellulose membrane (Schleicher & Schuell). Nuclear and cytoplasmic fractions were prepared as described previously (10). MK2 was immunoprecipitated from cell lysates (500 µg) with a rabbit polyclonal antibody (4 µg; Genex Bioscience) coupled to protein A-Sepharose (100 µl; Amersham). The phosphospecific MK2 antibody (Thr 334; Cell Signaling) was used at a dilution of 1:1,000. The primary monoclonal antibodies used were purified anti-HA (12CA5), anti-HuR (3A2; Santa Cruz), anti-cyclin A (from W. Krek), anti-hnRNPC (4F4; from G. Dreyfuss), and anti-ß-tubulin (Sigma), all used at a 1:1,000 dilution. We used a horseradish peroxidase-conjugated sheep anti-mouse antibody (Amersham) as a secondary antibody (1:2,000 dilution) or horseradish peroxidase-conjugated protein A (1:5,000). An enhanced chemiluminescence detection method (ECL2; Amersham) was used, and the membrane was exposed to Kodak X-Omat LS Film.
Recombinant GST proteins. GST fusion proteins were produced in Escherichia coli BL21(DE3) and purified using glutathione-Sepharose beads (Pharmacia) as specified by the manufacturer. Purified proteins were dialyzed against 100 volumes of buffer D (10 mM HEPES-KOH [pH 7.9], 3 mM magnesium acetate, 10% glycerol, 0.1 mM EDTA, 0.1 mM phenylmethylsulfonyl fluoride 0.5 mM dithiothreitol [DTT]) for 1 h at 4°C and stored at -80°C.
In vitro synthesis of RNA transcripts.
Templates for synthesis of the AREs of uPA or uPAR mRNA were prepared from annealed DNA oligonucleotides containing T7 promoter sequences as described previously (44). The oligonucleotides used were (only sense strands are shown) AREuPA (5'-TAA TAC GAC TCA CTA TAG GGC ACT GAA TAT TTA TAT TTC ACT ATT TTT ATT TAT ATT TTT GTA ATT TTA-3') and AREuPAR (5'-TAA TAC GAC TCA CTA TAG GGT TAT TAA TTA ATA TTC ATA TTA TTT ATT TTA TAC TTA CAT AAA GAT TTT-3'). Mutant AREs were prepared using oligonucleotides that have a guanosine (G) in place of the thymidine (T) nucleotides underlined above. In vitro transcription using T7 RNA polymerase in the presence of [
-32P]UTP was performed as specified by the manufacturer (Promega). For in vitro RNA decay assays, we prepared RNA transcripts composed of 140 nucleotides (nt) of the rabbit ß-globin 3'UTR, with or without the 47-nt AREuPA and with or without a 60-residue poly(A) tail. In vitro transcription of these RNA transcripts was performed in the presence of the mRNA cap analog m7G(5')ppp(5')G (Amersham). The detailed procedure has been described previously (22). SP6 RNA polymerase was used as instructed by the manufacturer (Promega). All RNAs were gel purified prior to use.
RNA electrophoretic mobility shift assay (REMSA). Radiolabeled ARE of uPA or uPAR mRNA (103 cpm) was incubated without or with 1 µg of the indicated antibodies in a 25-µl reaction mixture containing 10 µg of HeLa nuclear extract, 10 mM HEPES-KOH (pH 7.9), 3 mM magnesium acetate, 10% glycerol, 40 ng of poly(A), 0.1 mM EDTA, 0.1 mM phenylmethylsulfonyl fluoride, and 0.5 mM DTT. Reaction mixture were preincubated on ice for 15 min and then incubated for 15 min at 30°C. RNA-protein complexes were resolved on a 6% nondenaturing polyacrylamide gel at 4°C. The gel was dried, and radioactive signals were analyzed using a PhosphorImager.
UV cross-linking and HuR immunoprecipitation assays.
Confluent cells in 100-mm dishes were transfected with or without 10 µg of pcDNA3-MK2-K76R using Lipofectamine 2000 for 24 h. Cells were serum starved for 4 h and, where indicated, treated with 20 µM rottlerin (Calbiochem) for 1 h before the addition of 200 µM hydrogen peroxide (H2O2) for a further 2 h. Nuclear and cytoplasmic fractions were prepared as described previously (10). Total protein (100 µg) from each fraction was incubated with [
-32P]UTP-labeled AREuPA (20 x 103 cpm) in a total reaction volume of 200 µl with buffer components as described above for REMSA. Reaction mixtures were preincubated on ice for 15 min and then incubated for 15 min at 30°C. UV cross-linking was carried out in a Stratalinker (250 mJ/m2) for 5 min on ice. Unbound RNA was digested with RNases A (10 µg) and T1 (10 U) for 15 min at 37°C. Immunoprecipitation was performed by the addition to each reaction mixture of a 50% solution of protein A-Sepharose (40 µl) precoupled with anti-HuR antibodies (800 ng; 3A2). Reaction mixtures were incubated with constant mixing for 1 h at 4°C. Protein A beads were washed once with REMSA buffer and then twice each with TNET buffer (50 mM Tris-HCl [pH 7.8], 140 mM NaCl, 5 mM EDTA, 1% Triton X-100) and TNE buffer (TNET without Triton). Bound proteins were eluted in SDS loading buffer at 95°C for 5 min. Precipitated proteins were resolved by SDS-PAGE, followed by Coomassie staining and autoradiography using a PhosphorImager.
In vitro RNA decay.
HeLa S100 extracts were prepared as described previously (21). A premix containing 50 µg of total HeLa S100 proteins in IVDA buffer (10 mM Tris-HCl [pH 7.5], 100 mM potassium acetate, 2 mM magnesium acetate, 10 mM creatine phosphate, 1 mM ATP, 0.4 mM GTP, 2 mM DTT, 0.1 mM spermine) (67), and, where indicated, 200 ng of GST or GST-HuR recombinant protein was prepared (45 µl total) on ice. Aliquots of 9 µl of the premix were incubated at 37°C with 1 µl of [
-32P]UTP-labeled RNA substrate (103 cpm). Reactions were stopped at different times (0 to 80 min) by the addition of 200 µl of a high-salt buffer (25 mM Tris-HCl [pH 7.6], 0.1% SDS, 400 mM NaCl), 10 µg of calf liver tRNA was used to aid precipitation, and [
-32P]UTP-labeled AREuPAR RNA (103 cpm) was used as an internal control for the subsequent phenol-chloroform extraction and ethanol precipitation of the processed RNA. Precipitated RNA was resuspended in 10 µl of RNA loading buffer (25 mM Tris-HCl [pH 7.6], 8 M urea, 1 mM EDTA) and resolved on a 5% acrylamide gel containing 7 M urea. The gel was dried, and radioactive signals were analyzed using a PhosphorImager.
Immunofluorescence. Cells were seeded on sterile coverslips in 35-mm dishes (1.5 x 105 cells per dish) and transfected with 2 µg of DNA by using Lipofectamine 2000. After 24 h, the cells were washed with PBS plus Ca2+ and Mg2+ [PBS(+)] and fixed in 1 ml of prewarmed 3% paraformaldehyde in PBS without Ca2+ and Mg2+ [PBS(-)] for 20 min at room temperature. The cells were permeabilized with 0.5% Triton X-100 in PBS(-) for 10 min, blocked with 5% normal goat serum for 20 min, and incubated for 2 h with a monoclonal anti-HuR (2 µg/ml) or anti-hnRNPC (1 µg/ml) antibody diluted in PBS(+) containing 1% goat serum. The cells were washed twice with PBS(+) (10 min per wash), incubated with secondary Alexa488 anti-mouse goat antibody (1:100; Molecular Probes) for 40 min, and washed three times with PBS(+) (10 min per wash). To visualize nuclei, DAPI (4',6-diamidino-2-phenylindole; 1:5,000) was added during the last wash. The coverslips were mounted on glass slides with Fluoromount (Serva). Fluorescence was visualized with a Zeiss Axioplan 2 fluorescence microscope, and all images were captured at x600 magnification.
| RESULTS |
|---|
|
|
|---|
2 h] and ß-globin-Xho [t1/2 > 20 h]). Introduction of mutations that changed the two AUUUA motifs in the ARE to AGGUA (AREuPA mut) strongly interfered with the destabilizing effect of the AREuPA (Fig. 1B, compare decay between ß-globin-AREuPA wild-type and ß-globin-AREuPA mutant [t1/2 > 12 h]). The results were similar in four independent experiments; we have therefore established a reproducible system to study AREuPA-mediated mRNA decay in vivo.
|
|
30 min (Fig. 3B). This AREuPA-mediated enhancement of RNA decay was suppressed twofold by the addition of GST-HuR to the decay reaction mixtures (Fig. 3A, lanes 15 to 18; Fig. 3B, t1/2
60 min). In control reactions, addition of the same amount of GST protein to the decay reaction mixtures did not affect AREuPA-mediated RNA decay (Fig. 3A, lanes 11 to 14; Fig. 3B, t1/2
30 min). We also used the above RNA substrates containing an additional poly(A) tail of 60 adenylates in decay assays. Interestingly, although RNA decay was suppressed, the inhibitory effect of GST-HuR on RNA deadenylation was not observed (data not shown). These results are consistent with in vivo data showing that HuR slows the decay of the mRNA body without affecting deadenylation kinetics (55) and demonstrate a specific and functional role for HuR in stabilizing AREuPA-containing RNA in vitro.
|
AREuPA mRNA containing the entire 3' UTR of uPA mRNA except the ARE is also unstable (49). Interestingly, the decay of this mRNA was not affected by the overexpression of HA-HuR (t1/2 = 1.2 h in both vector- and HuR-transfected cells), suggesting that the mRNA-stabilizing effect of HuR is dependent on the presence of the AREuPA (Fig. 4B). The HeLa Tet-off cells used in this work express detectable levels of endogenous uPA and uPAR mRNAs, which have a t1/2 of 1.5 and 1.9 h, respectively. Similar to the effect on chimeric ß-globin-AREuPA mRNA, HuR overexpression increased the stability of endogenous uPA and uPAR mRNAs approximately 2-fold and 2.5-fold (t1/2 increased from 1.5 to 3.2 h and from 1.9 to 5 h), respectively (Fig. 4C). The greater stabilizing effect of HuR on uPAR mRNA than on uPA mRNA correlates with the high-affinity interaction between AREuPAR and HuR in vitro, compared with the interaction between AREuPA and HuR (Fig. 2B). HuR overexpression also increased the stability of otherwise unstable uPA mRNA in MCF-10A cells, a cell line derived from normal breast tissue (data not shown). These results indicate that the AREs from uPA and uPAR mRNAs are functional targets of HuR in vivo.
|
|
3 h) compared to that in vector-transfected cells (t1/2
1.5 h), but this stabilizing effect was abrogated when the cells were cotransfected with a vector expressing MK2-K76R (t1/2
1.2 h) (Fig. 6A). A specific inhibitor of p38 MAP kinase, SB203580, which strongly destabilizes ARE-mRNAs in MDA-MB-231 cells (46) and in HeLa Tet-off cells transfected with empty vector (t1/2 decreased from 1.5 h [untreated] to 0.5 h [SB203580 treated]) (Fig. 6B), did not inhibit MK2-EE-mediated mRNA stabilization (t1/2
3 h in MK2-EE-transfected cells, independent of treatment with SB203580). This suggests that MK2-EE acts downstream of p38 MAP kinase. Similarly, overexpression of MK2-EE stabilized endogenous uPA and uPAR mRNAs approximately twofold (Fig. 6C). Coexpression of the dominant negative form of MK2 interfered with the stabilizing effect of MK2-EE on uPA and uPAR mRNAs (Fig. 6C). Taken together, these results indicate that p38 MAP kinase pathway-mediated stabilization of uPA and uPAR mRNA involves MK2 by a mechanism acting through the AREuPA and possibly the AREuPAR.
|
|
|
| DISCUSSION |
|---|
|
|
|---|
Contrary to previous reports which showed that depletion of HuR levels led to a decrease in p21, cyclin A, and cyclin B1 mRNA stability (64, 66), we did not observe such effects on uPA and uPAR mRNA stability. However, we did observe a decrease in steady-state levels of uPA and uPAR mRNAs after HuR depletion (Fig. 5). A decrease in the steady-state levels of p21, cyclin A, and cyclin B1 mRNAs was also observed in HuR-depleted cells (64, 66). The differences between our observation and that of others with respect to the effect of HuR depletion on mRNA destabilization may lie in the method used for HuR depletion and/or the cell lines used, i.e., generation of human colorectal carcinoma (RKO) cell lines constitutively expressing antisense HuR (64, 66) versus transfection of siRNAs targeting HuR in breast cancer cell lines (Fig. 5). A simpler explanation for our results is that HuR affects the processing or export of uPA and uPAR pre-mRNAs; therefore, its depletion caused the observed reduction in steady-state levels of uPA and uPAR mRNAs (Fig. 5) or, indeed, p21 and cyclin A/B1 mRNAs (64, 66). Furthermore, we cannot rule out the possibility that the remaining HuR in our siHuR-treated cells (ca. 20 to 30%) is sufficient to exert normal regulation on the stabilities of the reduced levels of uPA and uPAR mRNAs in these cells. Further experiments are needed to solve this issue.
Stabilization of ARE-containing mRNA by various stimuli that activate stress-signaling pathways has been demonstrated (2, 26, 40, 42, 45) and, on at least one occasion, was suggested to be linked to the enhanced cytoplasmic localization of HuR (66). We have provided evidence to support this idea by using the constitutively active, stress-inducible kinase MK2. We showed that HuR indeed accumulates in the cytoplasm, in conjunction with an increase in the stability of ARE-containing mRNAs, when cells transiently overexpress constitutively active MK2 (Fig. 6 and 7) or when cells are subjected to oxidative stress, which is known to activate p38 MAP kinase (47) and to cause the phosphorylation and likely activation of MK2 (Fig. 8). Similarly, conditions of hypoxic stress are known to stabilize ARE mRNAs (40) and to activate MK2 (32). How does activation of MK2 induce the cytoplasmic accumulation of HuR? Direct cellular targets of MK2 include hsp27 (39) and hnRNP A0 (57). Both these proteins have been implicated in MK2-regulated ARE mRNA stabilization (39, 57). If and how they may be involved in increasing the cytoplasmic concentration of HuR is at present unclear. However, it is unlikely that HuR is a direct cellular substrate of MK2 because (i) extensive analysis of macrophage AUBPs revealed only two major phosphorylated substrates of MK2, hnRNP A0 and RBM7 (57), and (ii) phosphorylated forms of HuR have not been found despite some effort in looking for them (8).
The mechanisms that regulate the localization or function of HuR are not fully understood, but recent studies have provided some important clues. It was shown that HuR associates with four proteins in vivo, three of which (SET
, SETß, and pp32) are inhibitors of protein phosphatase 2A (8). These four proteins (including APRIL) interact with RRM3 and the hinge region of HuR, domains that are important for the ability of HuR to shuttle between the nucleus and cytoplasm (19). Interestingly, APRIL and pp32 are known phosphoproteins (61, 62). This is consistent with accumulating evidence that the nuclear-cytoplasmic localization of HuR is modulated by signal transduction pathways. For example, AMP-activated protein kinase (AMPK), a metabolic stress sensor, was shown to reduce the cytoplasmic levels of HuR (65). However, stimulation of glucose transport by AMP-activated protein kinase is mediated through its activation of p38 MAP kinase (70). These two independent observations are conflicting if, according to our model, the p38 MAP kinase pathway is involved in the positive regulation of cytoplasmic HuR. However, they raise the possibility that activation of p38 MAP kinase is not solely responsible for the translocation of HuR to the cytoplasm. Presumably, the activation of MK2 may be sufficient, based on speculation that it can target some ARE-binding proteins (36). Our results partly support this hypothesis because inhibition of p38 MAP kinase did not interfere with MK2-EE-induced ARE-mRNA stabilization (Fig. 6B). This also suggests that the specificity of p38 MAP kinase-mediated AREuPA-mRNA stabilization reported earlier (46) is carried out by its downstream effector, MK2. Another possibility is that the extracellular cues that lead to AMPK-mediated activation of p38 MAP kinase do not impinge on the function of these kinases in the regulation of cytoplasmic HuR. Recently, it was reported that HuR is posttranslationally modified by methylation on arginine residues residing within the hinge region (41). Interestingly, HuR methylation is increased in lipopolysaccharide-stimulated macrophages leading to HuR-mediated stabilization of tumor necrosis factor alpha mRNA (41). It is not yet clear whether this modification can modulate the interaction of HuR with its ligands, thus affecting its nucleocytoplasmic shuttling. Whatever the mechanism, this result points to the possibility that methylation and not phosphorylation of HuR may be the key regulatory modification important for its cellular localization (41). In this context, the kinase activity of MK2 may regulate the activity of the protein-arginine methyltransferase CARM1, which methylates HuR (41).
Two HuR ligands, APRIL and pp32, participate in the nuclear export of HuR mediated by the mammalian export receptor CRM1 specifically during heat shock (23). One major response of cells to heat shock is the activation of stress-signaling pathways, the most prominent of which is the p38 MAP kinase pathway (see reference 15 for a review). However, on heat shock, HuR dissociates from cytoplasmic poly(A)+ RNA and associates with nuclear poly(A)+ RNA, and a fraction of it accumulates in discrete cytoplasmic foci (24). It was postulated that increased association of HuR to nuclear poly(A)+ RNA was sufficient to produce the observed stabilizing effect on ARE-mRNAs during this specific stress condition (24). Our findings show that the distribution of HuR in the cytoplasm on transfection of constitutively active MK2 appears to be uniform (Fig. 7C). Clearly, the effect of activated MK2 on the cellular location of HuR after heat shock, if any, is occurring through an alternative mechanism. One model for HuR function suggests that HuR associates with ARE mRNAs in the nucleus and during nuclear export to protect these mRNAs from nuclear decay. This protection continues in the cytoplasm, and once the mRNAs have been translated, HuR is recycled back to the nucleus to carry out another round of ARE-binding protection (33). This model, which would presumably apply under normal cellular conditions or under a variety of different stimuli, but not heat shock, is more in line with our findings.
NF90 is a double-stranded RNA-binding protein that was recently described as a novel AUBP (60), and we have observed an RNA-dependent interaction between NF90, also known as NFAR1 (58), and HuR (unpublished data). The export of NF90 from the nucleus of activated T cells was shown to be required for the stabilization of ARE-containing IL-2 mRNA (60). Furthermore, ARE mRNA stabilization during amino acid starvation correlated with an increase in the cytoplasmic concentration of HuR (71). Notably, heat shock and other cellular stresses can cause phosphorylation-dependent nuclear coexport of MK2 and p38 MAP kinase, suggesting their role in the phosphorylation of cytoplasmic substrates (4, 16, 17). The data we have presented here indicate that the kinase activity of MK2 is important for the nuclear export of HuR. Just how MK2 can influence this event and whether it is coexported with HuR (directly or indirectly) or can modulate the function of HuR in the cytoplasm will be the focus of future studies. Taken together, these results support the idea that stabilization of labile ARE mRNAs in the cell requires the nuclear export of several proteins, including HuR and possibly MK2.
Stabilization of some ARE-containing mRNAs has been found previously in certain tumors (29, 48). Some of our observations have led us to propose that the altered distribution of HuR, and possibly other proteins, contributes to (or is important for) neoplastic transformation. HuR is abundant in the cytoplasm of a highly metastatic breast cancer cell line, MDA-MB-231 (Fig. 7A), and we have shown that constitutively active p38 MAP kinase levels are high in these cells, which coincidentally express an extremely stable uPA mRNA (46). This observation provides a plausible scenario in which the activated p38 MAP kinase pathway leads to elevated levels of cytoplasmic HuR, which carries out its role in sustaining the stability of uPA, uPAR, and other ARE-containing mRNAs in MDA-MB-231 cells. We suggest that this model is a phenomenon relevant to many other metastatic cancer cells. In light of the present finding that MK2 and HuR act downstream of p38 MAP kinase in the regulation of uPA and uPAR mRNA decay, we postulate that inhibition or expression of dominant negative forms of MK2 and HuR in MDA-MB-231 cells would affect mRNA decay and cell invasiveness in a similar manner to p38 MAP kinase inhibition (46). Indeed, our preliminary, unpublished observations using rottlerin (12), which effectively inhibits both MK2 and PRAK, a p38-regulated/activated protein kinase (52), caused a significant decrease in the stability of uPA mRNA in MDA-MB-231 cells, similar to the decreased stability exerted by inhibition of p38 MAP kinase using SB203580 (46). A distinct role for MK2 in cell migration was recently described (38). Together with the data presented here and knowledge of the established roles for the uPA-uPAR system in cell adhesion and migration, we suggest an exciting link between MK2 and the uPA-uPAR system in the regulation of this essential cellular process.
In summary, the AREs of uPA and uPAR mRNAs have been identified as new targets of the mRNA-stabilizing protein HuR. We also showed that MK2 acts downstream of p38 MAP kinase to specify stress-related, ARE mRNA-stabilizing signals, and we have linked activation of MK2 to the cytoplasmic accumulation of HuR. It remains to be seen mechanistically how stress-induced signals can cause the increased shuttling of HuR (or other proteins) from the nucleus to cytoplasm to affect the stability of labile ARE-containing mRNAs. This knowledge is required to understand how changes in mRNA stability could perpetuate or maintain certain pathological conditions.
| ACKNOWLEDGMENTS |
|---|
| FOOTNOTES |
|---|
Present address: Division of Medical Genetics, CHUV University Hospital, CH-1011 Lausanne, Switzerland. ![]()
| REFERENCES |
|---|
|
|
|---|
2. Andrews, G. K., M. A. Harding, J. P. Calvet, and E. D. Adamson. 1987. The heat shock response in HeLa cells is accompanied by elevated expression of the c-fos proto-oncogene. Mol. Cell. Biol. 7:3452-3458.
3. Bakheet, T., B. R. Williams, and K. S. Khabar. 2003. ARED 2.0: an update of AU-rich element mRNA database. Nucleic Acids Res. 31:421-423.
4. Ben-Levy, R., S. Hooper, R. Wilson, H. F. Paterson, and C. J. Marshall. 1998. Nuclear export of the stress-activated protein kinase p38 mediated by its substrate MAPKAP kinase-2. Curr. Biol. 8:1049-1057.[CrossRef][Medline]
5. Besser, D., P. Verde, Y. Nagamine, and F. Blasi. 1996. Signal transduction and the u-PA/u-PAR system. Fibrinolysis 10:215-237.[CrossRef]
6. Blasi, F. 2001. u-PA and cell migration: urokinase receptor as a ligand for a chemotactic G-protein-coupled receptor. Haemostasis 31(Suppl. 1):59.
7. Blasi, F., and P. Carmeliet. 2002. uPAR: a versatile signalling orchestrator. Nat. Rev. Mol. Cell. Biol. 3:932-943.[CrossRef][Medline]
8. Brennan, C. M., I. E. Gallouzi, and J. A. Steitz. 2000. Protein ligands to HuR modulate its interaction with target mRNAs in vivo. J. Cell Biol. 151:1-14.
9. Brennan, C. M., and J. A. Steitz. 2001. HuR and mRNA stability. Cell. Mol. Life Sci. 58:266-277.[CrossRef][Medline]
10. Caruccio, L., and R. Banerjee. 1999. An efficient method for simultaneous isolation of biologically active transcription factors and DNA. J. Immunol. Methods 230:1-10.[CrossRef][Medline]
11. Chen, C. Y., and A. B. Shyu. 1995. AU-rich elements: characterization and importance in mRNA degradation. Trends Biochem. Sci. 20:465-470.[CrossRef][Medline]
12. Davies, S. P., H. Reddy, M. Caivano, and P. Cohen. 2000. Specificity and mechanism of action of some commonly used protein kinase inhibitors. Biochem. J. 351:95-105.[CrossRef][Medline]
13. Dean, J. L., R. Wait, K. R. Mahtani, G. Sully, A. R. Clark, and J. Saklatvala. 2001. The 3' untranslated region of tumor necrosis factor alpha mRNA is a target of the mRNA-stabilizing factor HuR. Mol. Cell. Biol. 21:721-730.
14. Degryse, B., S. Orlando, M. Resnati, S. A. Rabbani, and F. Blasi. 2001. Urokinase/urokinase receptor and vitronectin/alpha(v)beta(3) integrin induce chemotaxis and cytoskeleton reorganization through different signaling pathways. Oncogene 20:2032-2043.[CrossRef][Medline]
15. Dorion, S., and J. Landry. 2002. Activation of the mitogen-activated protein kinase pathways by heat shock. Cell Stress Chaperones 7:200-206.[CrossRef][Medline]
16. Engel, K., A. Ahlers, M. A. Brach, F. Herrmann, and M. Gaestel. 1995. MAPKAP kinase 2 is activated by heat shock and TNF-alpha: in vivo phosphorylation of small heat shock protein results from stimulation of the MAP kinase cascade. J. Cell. Biochem. 57:321-330.[CrossRef][Medline]
17. Engel, K., A. Kotlyarov, and M. Gaestel. 1998. Leptomycin B-sensitive nuclear export of MAPKAP kinase 2 is regulated by phosphorylation. EMBO J. 17:3363-3371.[CrossRef][Medline]
18. Engel, K., H. Schultz, F. Martin, A. Kotlyarov, K. Plath, M. Hahn, U. Heinemann, and M. Gaestel. 1995. Constitutive activation of mitogen-activated protein kinase-activated protein kinase 2 by mutation of phosphorylation sites and an A-helix motif. J. Biol. Chem. 270:27213-27221.
19. Fan, X. C., and J. A. Steitz. 1998. HNS, a nuclear-cytoplasmic shuttling sequence in HuR. Proc. Natl. Acad. Sci. USA 95:15293-15298.
20. Fan, X. C., and J. A. Steitz. 1998. Overexpression of HuR, a nuclear-cytoplasmic shuttling protein, increases the in vivo stability of ARE-containing mRNAs. EMBO J. 17:3448-3460.[CrossRef][Medline]
21. Ford, L. P., J. Watson, J. D. Keene, and J. Wilusz. 1999. ELAV proteins stabilize deadenylated intermediates in a novel in vitro mRNA deadenylation/degradation system. Genes Dev. 13:188-201.
22. Fritz, D. T., L. P. Ford, and J. Wilusz. 2000. An in vitro assay to study regulated mRNA stability. Sci. STKE 2000:PL1.
23. Gallouzi, I. E., C. M. Brennan, and J. A. Steitz. 2001. Protein ligands mediate the CRM1-dependent export of HuR in response to heat shock. RNA 7:1348-1361.[Abstract]
24. Gallouzi, I. E., C. M. Brennan, M. G. Stenberg, M. S. Swanson, A. Eversole, N. Maizels, and J. A. Steitz. 2000. HuR binding to cytoplasmic mRNA is perturbed by heat shock. Proc. Natl. Acad. Sci. USA 97:3073-3078.
25. Goldberg-Cohen, I., H. Furneauxb, and A. P. Levy. 2002. A 40-bp RNA element that mediates stabilization of vascular endothelial growth factor mRNA by HuR. J. Biol. Chem. 277:13635-13640.
26. Gorospe, M., X. Wang, and N. J. Holbrook. 1998. p53-dependent elevation of p21Waf1 expression by UV light is mediated through mRNA stabilization and involves a vanadate-sensitive regulatory system. Mol. Cell. Biol. 18:1400-1407.
27. Guhaniyogi, J., and G. Brewer. 2001. Regulation of mRNA stability in mammalian cells. Gene 265:11-23.[CrossRef][Medline]
28. Han, Q., J. Leng, D. Bian, C. Mahanivong, K. A. Carpenter, Z. K. Pan, J. Han, and S. Huang. 2002. Rac1-MKK3-p38-MAPKAKPK2 pathway promotes urokinase plasminogen activator mRNA stability in invasive breast cancer cells. J. Biol. Chem. 107:48379-48385.
29. Hirsch, H. H., A. P. Nair, V. Backenstoss, and C. Moroni. 1995. Interleukin-3 mRNA stabilization by a trans-acting mechanism in autocrine tumors lacking interleukin-3 gene rearrangements. J. Biol. Chem. 270:20629-20635.
30. Irigoyen, J. P., P. Munoz-Canoves, L. Montero, M. Koziczak, and Y. Nagamine. 1999. The plasminogen activator system: biology and regulation. Cell. Mol. Life Sci. 56:104-132.[CrossRef][Medline]
31. Jo, M., K. S. Thomas, A. V. Somlyo, A. P. Somlyo, and S. L. Gonias. 2002. Cooperativity between the Ras-ERK and Rho-Rho kinase pathways in urokinase-type plasminogen activator-stimulated cell migration. J. Biol. Chem. 277:12479-12485.
32. Kayyali, U. S., C. M. Pennella, C. Trujillo, O. Villa, M. Gaestel, and P. M. Hassoun. 2002. Cytoskeletal changes in hypoxic pulmonary endothelial cells are dependent on MAPK-activated protein kinase MK2. J. Biol. Chem. 277:42596-42602.
33. Keene, J. D. 1999. Why is Hu where? Shuttling of early-response-gene messenger RNA subsets. Proc. Natl. Acad. Sci. USA 96:5-7.
34. Kisielow, M., S. Kleiner, M. Nagasawa, A. Faisal, and Y. Nagamine. 2002. Isoform-specific knockdown and expression of adaptor protein ShcA using small interfering RNA. Biochem. J. 363:1-5.[CrossRef][Medline]
35. Kontoyiannis, D., A. Kotlyarov, E. Carballo, L. Alexopoulou, P. J. Blackshear, M. Gaestel, R. Davis, R. Flavell, and G. Kollias. 2001. Interleukin-10 targets p38 MAPK to modulate ARE-dependent TNF mRNA translation and limit intestinal pathology. EMBO J. 20:3760-3770.[CrossRef][Medline]
36. Kotlyarov, A., and M. Gaestel. 2001. Is MK2 (mitogen-activated protein kinase-activated protein kinase 2) the key for understanding post-transcriptional regulation of gene expression? Biochem. Soc. Trans. 30:959-963.
37. Kotlyarov, A., A. Neininger, C. Schubert, R. Eckert, C. Birchmeier, H. D. Volk, and M. Gaestel. 1999. MAPKAP kinase 2 is essential for LPS-induced TNF-alpha biosynthesis. Nat. Cell Biol. 1:94-97.[CrossRef][Medline]
38. Kotlyarov, A., Y. Yannoni, S. Fritz, K. Laass, J. B. Telliez, D. Pitman, L. L. Lin, and M. Gaestel. 2002. Distinct cellular functions of MK2. Mol. Cell. Biol. 22:4827-4835.
39. Lasa, M., K. R. Mahtani, A. Finch, G. Brewer, J. Saklatvala, and A. R. Clark. 2000. Regulation of cyclooxygenase 2 mRNA stability by the mitogen-activated protein kinase p38 signaling cascade. Mol. Cell. Biol. 20:4265-4274.
40. Levy, N. S., S. Chung, H. Furneaux, and A. P. Levy. 1998. Hypoxic stabilization of vascular endothelial growth factor mRNA by the RNA-binding protein HuR. J. Biol. Chem. 273:6417-6423.
41. Li, H., S. Park, B. Kilburn, M. A. Jelinek, A. Henschen-Edman, D. W. Aswad, M. R. Stallcup, and I. A. Laird-Offringa. 2002. Lipopolysaccharide-induced methylation of HuR, an mRNA-stabilizing protein, by CARM1. J. Biol. Chem. 277:44623-44630.
42. Lindstein, T., C. H. June, J. A. Ledbetter, G. Stella, and C. B. Thompson. 1989. Regulation of lymphokine messenger RNA stability by a surface-mediated T cell activation pathway. Science 244:339-343.
43. Ma, W. J., S. Cheng, C. Campbell, A. Wright, and H. Furneaux. 1996. Cloning and characterization of HuR, a ubiquitously expressed Elav-like protein. J. Biol. Chem. 271:8144-8151.
44. Milligan, J. F., D. R. Groebe, G. W. Witherell, and O. C. Uhlenbeck. 1987. Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates. Nucleic Acids Res. 15:8783-8798.
45. Ming, X. F., M. Kaiser, and C. Moroni. 1998. c-jun N-terminal kinase is involved in AUUUA-mediated interleukin-3 mRNA turnover in mast cells. EMBO J. 17:6039-6048.[CrossRef][Medline]
46. Montero, L., and Y. Nagamine. 1999. Regulation by p38 mitogen-activated protein kinase of adenylate- and uridylate-rich element-mediated urokinase-type plasminogen activator (uPA) messenger RNA stability and uPA-dependent in vitro cell invasion. Cancer Res. 59:5286-5293.
47. Naderi, J., M. Hung, and S. Pandey. 2003. Oxidative stress-induced apoptosis in dividing fibroblasts involves activation of p38 MAP kinase and over-expression of Bax: resistance of quiescent cells to oxidative stress. Apoptosis 8:91-100.[CrossRef][Medline]
48. Nair, A. P., S. Hahn, R. Banholzer, H. H. Hirsch, and C. Moroni. 1994. Cyclosporin A inhibits growth of autocrine tumour cell lines by destabilizing interleukin-3 mRNA. Nature 369:239-242.[CrossRef][Medline]
49. Nanbu, R., P. A. Menoud, and Y. Nagamine. 1994. Multiple instability-regulating sites in the 3' untranslated region of the urokinase-type plasminogen activator mRNA. Mol. Cell. Biol. 14:4920-4928.
50. Nanbu, R., L. Montero, D. D'Orazio, and Y. Nagamine. 1997. Enhanced stability of urokinase-type plasminogen activator mRNA in metastatic breast cancer MDA-MB-231 cells and LLC-PK1 cells down-regulated for protein kinase Ccorrelation with cytoplasmic heterogeneous nuclear ribonucleoprotein C. Eur. J. Biochem. 247:169-174.[Medline]
51. Neininger, A., D. Kontoyiannis, A. Kotlyarov, R. Winzen, R. Eckert, H. D. Volk, H. Holtmann, G. Kollias, and M. Gaestel. 2002. MK2 targets AU-rich elements and regulates biosynthesis of tumor necrosis factor and interleukin-6 independently at different post-transcriptional levels. J. Biol. Chem. 277:3065-3068.
52. New, L., Y. Jiang, M. Zhao, K. Liu, W. Zhu, L. J. Flood, Y. Kato, G. C. Parry, and J. Han. 1998. PRAK, a novel protein kinase regulated by the p38 MAP kinase. EMBO J. 17:3372-3384.[CrossRef][Medline]
53. Nguyen, D. H., D. J. Webb, A. D. Catling, Q. Song, A. Dhakephalkar, M. J. Weber, K. S. Ravichandran, and S. L. Gonias. 2000. Urokinase-type plasminogen activator stimulates the Ras/Extracellular signal-regulated kinase (ERK) signaling pathway and MCF-7 cell migration by a mechanism that requires focal adhesion kinase, Src, and Shc. Rapid dissociation of GRB2/Sps-Shc complex is associated with the transient phosphorylation of ERK in urokinase-treated cells. J. Biol. Chem. 275:19382-19388.