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Molecular and Cellular Biology, August 2004, p. 7003-7014, Vol. 24, No. 16
0270-7306/04/$08.00+0 DOI: 10.1128/MCB.24.16.7003-7014.2004
Copyright © 2004, American Society for Microbiology. All Rights Reserved.
Departments of Pathology,1 Internal Medicine, University of Michigan, Ann Arbor, Michigan 48109,3 Department of Microbiology and Immunology, University of Miami School of Medicine, Miami, Florida 331012
Received 19 December 2003/ Returned for modification 27 February 2004/ Accepted 26 April 2004
| ABSTRACT |
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| INTRODUCTION |
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Among the molecules that regulate apoptosis are several members of the inhibitor of apoptosis (IAP) family (16, 27), which prevent cell death by acting as endogenous suppressors of caspase activity (18). The IAPs contain one to three copies of a domain known as the baculoviral IAP repeat (BIR), the defining motif of the IAP family. In addition, several IAP members contain a RING domain at the carboxyl terminus that in many cases has been shown to possess E3 ubiquitin-ligase activity (28, 29, 40, 74). The most thoroughly characterized member of the IAP family is X-linked inhibitor of apoptosis (XIAP) (21, 41, 67). XIAP contains three amino-terminal BIR domains and a carboxy-terminal RING domain, and it is the most potent endogenous inhibitor of caspases known, specifically targeting the initiator caspase 9 and the effector caspases 3 and 7, binding each with nanomolar affinity (18). Recent structural studies have revealed that determinants in BIR3 of XIAP are responsible for inhibition of caspase 9 (52, 61) and that the region immediately amino terminal to BIR2 is the major determinant for inhibition of caspases 3 and 7 (11, 30, 50).
Despite overlap of both function and substrate specificity among the many known caspases, a hierarchical cascade of activation exists (55), and the exact subset of caspases activated during apoptosis appears to be stimulus specific. By examining the patterns of caspase activation following many different apoptotic stimuli, at least two distinct pathways have emerged. Death signals originating from cellular stress, growth factor deprivation, radiation, and chemotherapeutic drugs activate an intrinsic apoptotic program that is mediated largely by the mitochondria. Mitochondrial release of cytochrome c into the cytoplasm induces the formation of an oligomeric complex containing cytochrome c and Apaf-1 (38). This complex, or "apoptosome" (1, 8, 9), supports the catalytic activation of caspase 9, which further cleaves and activates the effector caspase 3, resulting in the subsequent degradation of cellular death substrates. In addition to cytochrome c, the nuclear-encoded, mitochondrially localized proteins Smac/DIABLO (19, 69) and Omi/HtrA2 (26, 44, 70) are also released into the cytoplasm. Once released, these two proteins bind to XIAP in a manner similar to caspases (10, 42, 59) and thereby promote apoptosis by neutralizing the caspase inhibitory function of XIAP. Additionally, Omi/HtrA2 may further inactivate XIAP through proteolytic processing (58, 73).
In contrast to the intrinsic pathway, death receptor stimulation activates an extrinsic apoptotic program that often requires no mitochondrial involvement. Instead, death receptor ligation induces the formation of a death-inducing signaling complex (DISC) which contains the initiator caspase 8 (45). DISC formation activates caspase 8 through a proximityinduced dimerization mechanism requiring no autoproteolysis (5), which then cleaves and activates caspase 3, resulting in further cleavage of cellular targets. In some cell types, however, the linear progression from DISC formation to caspase 3 activation is insufficient to complete the cell death program, and amplification of the death receptor stimulus by engagement of the mitochondrially mediated cell death pathway is required (35, 51). One reported mechanism by which the mitochondrial pathway is engaged following death receptor activation is through caspase 8-mediated cleavage of Bid, a prodeath member of the Bcl-2 family. Once cleaved, truncated Bid translocates to the mitochondria (25, 37, 43), where it can induce the release of cytochrome c, Smac/DIABLO, and Omi/HtrA2. In this manner, death receptor signals may be amplified through formation and activation of the apoptosome, which can increase the activation of caspase 3, or through the neutralization of XIAP by Smac/DIABLO and Omi/HtrA2.
Much that is known about the caspase inhibitory properties of XIAP has been derived either from in vitro caspase activity studies employing recombinant proteins (17, 18) or from transient-expression studies of XIAP in intact cells (15, 20). While critical to advancing our understanding of XIAP function, due to their short-term nature these studies have been limited in that no examination of the long-term effects of XIAP expression has been possible. Here we describe a detailed characterization of the protective properties of XIAP stably overexpressed in Jurkat cells. Experiments evaluating both full-length XIAP and a truncation mutant of XIAP lacking the first two BIR domains (BIR3-sp-RING) show that the caspase 3 inhibitory property of XIAP, though dispensable for protection from etoposide treatment, is absolutely required for protection from activation of the death receptor CD95 (Apo-1/Fas). In contrast, full-length XIAP supports both long-term survival and proliferative capacity of cells following CD95 stimulation, an effect that stems from the ability of full-length XIAP to prevent caspase 3 and 9 activation, to inhibit the release of the mitochondrial proteins cytochrome c and Smac/DIABLO, and to suppress the loss of mitochondrial membrane potential. Finally, reduction of XIAP protein levels by RNA interference (RNAi) in cells overexpressing Bcl-xL results in sensitization to CD95-mediated death. These data are consistent with a model in which XIAP, through inhibition of caspase activity, functions upstream of mitochondrial activation and confers both apoptotic resistance and long-term proliferative capacity to cells by preventing mitochondrial amplification following death receptor engagement.
| MATERIALS AND METHODS |
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Cell lines. Jurkat cells were maintained in either Iscove's medium or RPMI 1640 supplemented with 10% fetal bovine serum, 2 mM L-glutamine, and 100 U of penicillin-streptomycin/ml at 37°C in an atmosphere of 95% air-5% CO2.
Transfections. Parental Jurkat cells were electroporated with the following constructs: pBABE-puro, pEBB-HA, pEBB-HA-XIAP, pEBB-HA-BIR3-sp-RING, pcDNA3, and pcDNA3-Bcl-xL, which have been described elsewhere (4, 6, 49). Briefly, 107 cells per transfection were electroporated with 30 µg of pEBB-HA, pEBB-HA-XIAP, or pEBB-HA-BIR3-sp-RING-XIAP along with 3 µg of pBABE-puro, or with 30 µg of either pcDNA3 or pcDNA3-Bcl-xL. pBABE-puro-based transfectants were selected in the presence of 1 µg of puromycin/ml, and pcDNA3-based transfectants were selected in the presence of 1 mg of G418/ml. Single-cell clones were obtained by limited dilution of bulk cultures arising from selection. High-expressing single-cell clones were maintained in either 1 µg of puromycin/ml or 1 mg of G418/ml.
Cell lysate preparation. Cells were harvested by centrifugation, washed in PBS, and resuspended in radioimmunoprecipitation assay (RIPA) lysis buffer (PBS containing 1% NP-40, 0.5% Na-deoxycholate, and 0.1% sodium dodecyl sulfate [SDS]) supplemented with 1 mM dithiothreitol, 1 mM phenylmethylsulfonyl fluoride, and 1 protease inhibitor cocktail tablet per 10 ml. Cells were incubated on ice for 20 min, and lysates were then cleared by centrifugation prior to protein concentration determination using the Bio-Rad protein assay kit according to the manufacturer's instructions.
Viability experiments. For titrations, cells (3 x 105 cells/ml; 1.25 ml/sample) were left untreated or treated with various concentrations of either anti-CD95 (1 to 500 ng/ml) or etoposide (0.1 to 50 µg/ml) and incubated at 37°C for 20 h. For all subsequent experiments, anti-CD95 and etoposide were used at concentrations of 100 ng/ml and 10 µg/ml, respectively. For soluble CD95 ligand experiments, cells were left untreated or treated with 5 ng of CD95 ligand/ml in the presence of 1 µg of anti-FLAG M2/ml at 37°C for 20 h. Following treatment, cells were harvested by centrifugation, washed with PBS, resuspended in PBS plus 1% bovine serum albumin and 2 µg of PI/ml, and then analyzed by flow cytometry using a Coulter EPICS model XL-MCL flow cytometer.
Long-term proliferation. Cells were left untreated or treated with either anti-CD95 or etoposide. Immediately following treatment, and once each day for 6 days thereafter, 50 µl from each culture was removed and cell density was determined by using a Beckman-Coulter model Z1 particle counter. Following 6 days of treatment, lysates were prepared from surviving cells as described above.
Extract preparation and immunoblot analysis. Jurkat and Jurkat-derived cells (5 x 107 to 10 x 107 cells/treatment) were treated with anti-CD95 or etoposide for 0, 2, 4, or 6 h. Following treatment, extracts were prepared as described previously (2), with minor modifications. Briefly, cells were harvested and washed once with PBS. Cell pellets were resuspended at 3 x 107 cells/ml in digitonin extraction buffer (PBS containing 250 mM sucrose, 70 mM KCl, 1 mM phenylmethylsulfonyl fluoride, 200 µg of digitonin/ml, and 1 protease inhibitor cocktail tablet per 10 ml) and incubated on ice for 5 min. Samples were then centrifuged at 1,000 x g for 5 min; the pellets were lysed in RIPA lysis buffer as described above, and the supernatants (cytoplasmic extracts) were collected and centrifuged again at 1,000 x g for 5 min to clear any remaining debris. The protein concentrations of all extracts were then determined using the Bio-Rad protein assay kit.
Western blot analysis. Cytoplasmic extracts (25 µg) or whole-cell lysates (60 µg) were prepared in LDS sample buffer (Invitrogen) and separated by SDS-polyacrylamide gel electrophoresis (SDS-PAGE) using 4-to-12% gradient SDS-PAGE gels (Invitrogen), followed by transfer to nitrocellulose membranes (Invitrogen). Membranes were blocked with a 5% milk solution in Tris-buffered saline containing 0.02 to 0.2% Tween and then incubated with the indicated antibodies for 1 h at room temperature. Following washing, membranes were incubated with horseradish peroxidase-conjugated anti-mouse immunoglobulin G or anti-rabbit immunoglobulin G secondary antibodies for 45 min at room temperature. Blots were visualized by enhanced chemiluminescence using Kodak XAR film.
Immunoprecipitations. Whole-cell lysates were prepared in RIPA lysis buffer as described above, normalized for protein content, and immediately incubated with anti-HA antibodies for 2 h at 4°C. Protein G-coupled agarose beads were then added, and the incubation was continued for 1 h. Agarose beads, along with any bound immune complexes, were recovered by centrifugation and washed in RIPA buffer, and precipitated proteins were eluted from the agarose beads by adding LDS sample buffer and heating to 95°C for 5 min. Recovered proteins were then separated by electrophoresis, and immunoblot analysis was carried out as described above.
In vitro caspase assays. Cytoplasmic extracts (12 µg; prepared as described above) were diluted with activation buffer [50 mM piperazine-N,N'-bis(2-ethanesulfonic acid) (pH 6.9), 0.1 mM EDTA, 10% glycerol, and 2 mM dithiothreitol] in the presence of 20 µM DEVD-AFC to a final volume of 200 µl. AFC release over time (a total of 40 measurements at 75-s intervals) was then measured at 37°C using a Cytofluor 4000 multiwell plate reader (Applied Biosystems) with an excitation wavelength of 400 nm and an emission wavelength of 508 nm.
Intact cell caspase assays. Cells (5 x 105 cells/ml; 1.25 ml/sample) were left untreated or treated with anti-CD95 and incubated at 37°C for 4 h. Following incubation, cells were harvested by centrifugation, resuspended in 50 µl of 10 µM PhiPhiLux-G1D2 substrate (OncoImmunin), and incubated for 1 h at 37°C. Samples were then washed once, resuspended in PBS, and analyzed by flow cytometry.
Mitochondrial membrane potential assays. Cells were left untreated or treated with anti-CD95 or etoposide. At 20 h after treatment, cells were harvested and washed with PBS. Cells were then resuspended in PBS plus 200 nM TMRM and incubated at 37°C for 15 min. Samples were then placed on ice and analyzed by flow cytometry.
RNAi. Cells (107 cells/transfection) were transfected with 16 µg of double-stranded RNA oligonucleotides by electroporation. Gene-specific targeting of XIAP was performed using an oligonucleotide corresponding to nucleotides 111 to 131 (AAGTGGTAGTCCTGTTTCAGC) of the coding sequence of XIAP. As a negative control, an oligonucleotide targeting nucleotides 322 to 342 (AAGACCCGCGCCGAGGTGAAG) of the coding sequence of green fluorescent protein (GFP) was used. At 24 h following transfection, viable cells from each sample were recovered by Ficoll-Paque gradient centrifugation (Roche) according to the manufacturer's instructions. At 48 h after transfection, a portion of cells from each transfection was used for viability experiments, as described above. The remaining cells were used for immunoblot analysis, as described above.
| RESULTS |
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The abilities of WT-XIAP, BIR3-sp-RING, and Bcl-xL cell lines to survive long-term administration of either anti-CD95 or etoposide were next assessed. Cells were treated with anti-CD95 or etoposide, and the cell density of each culture was determined every day for 6 days after the initial treatment. In this manner, the proliferative capacity of each cell line, as indicated by an increase in cell number over time, was determined. Following anti-CD95 administration, both WT-XIAP and Bcl-xL cells were capable not only of surviving long-term treatment (Fig. 2C) but also of resuming proliferation after a short lag phase, which was not the case for either the BIR3-sp-RING cells or control cells (Fig. 2A). To confirm that the proliferation observed for WT-XIAP and Bcl-xL cells was not due to selection of cells that express lower levels of CD95, immunoblot analysis for CD95 protein was performed following treatment (Fig. 2B). While there appeared to be a reduction in the levels of monomeric CD95 in both cell lines following treatment, oligomerized CD95 was readily detectable in long-term-treated cultures from both cell lines, in contrast to untreated samples that displayed no oligomerized CD95. Thus, the total levels of CD95 remained unchanged during treatment, suggesting that the long-term survival and proliferation observed for WT-XIAP and Bcl-xL cells was not due to a reduction in CD95 protein levels. Removal of anti-CD95 after 24 h had no effect on the survival or growth of WT-XIAP and Bcl-xL cells and was unable to restore either viability or proliferative capacity to the BIR3-sp-RING cells (data not shown). None of the cell lines examined were capable of proliferating following etoposide administration (data not shown), and only cells overexpressing Bcl-xL remained viable following long-term etoposide treatment (Fig. 2D).
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Since the immunoblot analysis detects caspase cleavage, but does not directly address caspase activity levels, the activity of caspase 3 was assessed both in vitro and in intact cells using fluorescent substrate cleavage assays. Using the same extracts prepared for immunoblot analysis (Fig. 3), caspase activity was tested by incubating these extracts with the caspase 3 substrate DEVD-AFC. Consistent with the immunoblot analysis, extracts from anti-CD95-treated control and BIR3-sp-RING cells contained significant caspase activity, whereas extracts from anti-CD95-treated WT-XIAP cells showed little to no caspase 3 activation (Fig. 4A). Furthermore, while control extracts contained caspase activity at the later time points following etoposide treatment, neither BIR3-sp-RING nor WT-XIAP extracts exhibited DEVD cleavage (Fig. 4B). To evaluate caspase 3 activity in the WT-XIAP line in vivo following anti-CD95 treatment, an additional caspase 3 activity assay was performed in intact cells by treating with anti-CD95 and then incubating cells with the cell-permeable caspase 3 substrate PhiPhiLux. When cleaved by activated caspase 3, this substrate becomes fluorescent, allowing the amount of caspase 3 activity to be quantified in intact cells by observing changes in fluorescence intensity (34). Cells were treated with anti-CD95, and caspase 3 activation was clearly observed in both control cells and BIR3-sp-RING cells, but no observable PhiPhiLux cleavage was present in WT-XIAP cells (Fig. 4C). These intact-cell results were consistent with both the immunoblot analysis and DEVD cleavage experiments and confirm that in WT-XIAP cells treated with anti-CD95, caspase 3 activity is inhibited.
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m (31, 72) (see Fig. S1 in the supplemental material). To further characterize the differences in the protective properties of WT-XIAP versus BIR3-sp-RING, the loss of 
m was examined. Cells were treated overnight with either anti-CD95 or etoposide, and 
m was determined by flow cytometry (Fig. 6A) following staining with TMRM. Both Bcl-xL and WT-XIAP cells maintained 
m following treatment with anti-CD95, whereas BIR3-sp-RING and control cells both lost 
m (Fig. 6B). However, following etoposide treatment, only Bcl-xL cells were capable of maintaining normal 
m, while control, WT-XIAP, and BIR3-sp-RING lines all showed a significant reduction of 
m (Fig. 6C). Since only those cells that maintain 
m survive long-term anti-CD95 treatment, these data correlate well with the results shown in Fig. 2 and suggest that XIAP supports the proliferative capacity of anti-CD95-treated cells, at least in part, by preventing the loss of 
m.
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m, XIAP appears capable of functioning upstream of mitochondrial activation in the prevention of cell death. Recent data suggest that in cells requiring mitochondrial amplification during death receptor-mediated apoptosis, the targeting of XIAP by the cytoplasmic release of Smac/DIABLO may play a more important role in apoptosis than the concurrent release of cytochrome c and subsequent apoptosome formation (14, 39, 62). Taken together, these data predict that in Bcl-xL cells, which are resistant to both etoposide- and anti-CD95-mediated death (Fig. 1 and 2), reducing XIAP protein levels would sensitize cells to anti-CD95 treatment. To test this hypothesis, XIAP protein levels were reduced in Bcl-xL cells by RNAi following transfection of short interfering RNA oligonucleotides (siRNA) specifically targeting XIAP. Forty-eight hours after transfection, the level of XIAP protein was greatly reduced (
90%) by XIAP-specific siRNA compared to control siRNA-transfected cells (Fig. 8A). Treatment of these cells with anti-CD95 showed that the reduction of XIAP protein significantly reduced the protective effects of Bcl-xL (Fig. 8B). However, reduction of XIAP protein by RNAi had no effect upon the viability of Bcl-xL cells following etoposide treatment (Fig. 8C), suggesting that the points at which XIAP functions in regulating apoptosis are stimulus dependent. These data support the hypothesis that XIAP can function upstream of mitochondrial activation during death receptor-mediated apoptosis, and the data further implicate XIAP as a target of mitochondrial amplification during death receptor-induced cell death.
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| DISCUSSION |
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Interestingly, both XIAP variants failed to protect cells and were incapable of supporting proliferative capacity following long-term administration of etoposide. Furthermore, Bcl-xL was also unable to facilitate eventual proliferation, though significantly higher levels of long-term viability by Bcl-xL were observed than with the XIAP variants. This observation contrasts with similar experiments examining Bcl-2-mediated protection of Jurkat cells, in which clonogenic survival was observed following a variety of intrinsic stimuli (3). However, this discrepancy may highlight differences among the various agents used to induce intrinsic cell death, since the previous report employed staurosporine, a protein kinase inhibitor, rather than etoposide, an inhibitor of topoisomerase II, used in the experiments shown here. By acting as a topoisomerase II inhibitor, etoposide induces DNA damage and subsequent cell cycle arrest at either the G1/S or G2/M transition (12). Given this mechanism of action, it is not surprising that despite remaining viable following long-term etoposide treatment, the Bcl-xL-overexpressing cells presented here were unable to reenter the cell cycle and continue proliferation.
Examination of caspase processing and activity following anti-CD95 revealed that in contrast to the BIR3-sp-RING mutant, WT-XIAP significantly inhibited both processing and activation of caspase 9 and caspase 3. Further, the partial processing of caspase 3 observed in WT-XIAP cells is consistent with the hypothesis that in the case of caspase 3, XIAP binds to a partially processed form of the zymogen and prevents subsequent cleavage to the fully active form (62). Following etoposide treatment, both XIAP variants equally inhibited caspase 9 and caspase 3, supporting the hypothesis that the caspase 3 inhibitory properties of XIAP are not required to protect cells from intrinsic proapoptotic stimuli. Moreover, since BIR3-sp-RING was incapable of binding Smac/DIABLO, it is likely that this protein prevents cell death through inhibition of caspase 9, rather than by preventing Smac/DIABLO from inhibiting endogenous XIAP.
By examining the events of mitochondrial amplification, a major insight into the mechanism by which XIAP supports long-term protection of cells from CD95-mediated death was obtained. Cytochrome c and Smac/DIABLO release, while not inhibited by either XIAP variant following etoposide treatment, was potently inhibited in WT-XIAP cells following anti-CD95 treatment. Furthermore, mitochondrial membrane potential was significantly reduced in both lines following etoposide treatment, yet remained normal in the WT-XIAP line. Several studies suggest that the preservation of mitochondrial integrity, in terms of preventing both the release of intermembrane proteins and the loss of membrane potential, is a major contributing factor in allowing cells not only to survive an apoptotic stimulus but also to proliferate once that stimulus is removed (3, 46). Our data agree with this view: only in cells that both failed to release mitochondrial proteins and continued to maintain mitochondrial membrane potential was cell death averted and proliferative capacity maintained. Since neither mitochondrial event occurs in WT-XIAP cells following anti-CD95 treatment, these observations support a model in which XIAP functions upstream of the mitochondria during death receptor-mediated death and that, by functioning prior to mitochondrial activation, XIAP can allow cells not only to survive, but to resume proliferation.
The functional consequences of cytochrome c and Smac/DIABLO release during death receptor-mediated apoptosis have recently been investigated, and it has been shown that Smac/DIABLO release plays a major role in allowing death to proceed (14, 62). Since XIAP is the predominant target of Smac/DIABLO (14, 39, 62), this suggests that preventing XIAP-mediated inhibition of caspase 3 may be more important than the activation of caspase 9 that occurs as a result of cytochrome c release. In support of this model, our data showed that reduction of XIAP protein levels by RNAi sensitized Bcl-xL cells to CD95-mediated death, in agreement with previous studies suggesting that the major consequence of mitochondrial amplification is the inhibition of XIAP by Smac/DIABLO.
Despite the data presented here, implicating an upstream regulatory role for XIAP in preventing death receptor-mediated apoptosis, the exact mechanism by which XIAP prevents mitochondrial amplification remains unclear. Neither full-length XIAP nor BIR3-sp-RING appears to affect the processing of caspase 8 following anti-CD95 treatment (Fig. 3A), and these results agree with previous reports describing the failure of XIAP to inhibit the activity of caspase 8 both in vitro (17, 18, 64) and in intact cells (22, 23, 32, 36, 71). It is therefore extremely unlikely that the protective effects of XIAP reported here are the result of direct caspase 8 inhibition. While it has been proposed that caspase 8-mediated Bid cleavage may play a role in mitochondrial amplification following death receptor activation (37, 43, 63), Bid cleavage has also been observed during intrinsic apoptosis induced by a variety of chemotherapeutic drugs (56), and caspase 8 activity has been shown to be dispensable for Bid cleavage following activation of intrinsic cell death in Jurkat cells (22). The implication of these studies is that caspase 3 plays a direct role in mediating Bid cleavage during intrinsic cell death and, indeed, at least one consensus caspase 3 cleavage site is present within the primary amino acid sequence of Bid (25). In light of these studies and along with the data presented here, one possible mechanism by which XIAP prevents CD95-mediated death in Jurkat cells is through preventing caspase 3-mediated Bid cleavage, an event that may be required for mitochondrial amplification during death receptor-mediated apoptosis. Alternatively, since Bid-deficient mice display no overt phenotype in CD95-mediated apoptosis in any cell type other than hepatocytes (75), it is possible that XIAP prevents death receptor amplification by inhibiting a caspase 3-dependent pathway that does not require Bid cleavage.
Taken together, the data presented here highlight a new position where XIAP can function in regulating apoptosis and support a model in which XIAP functions upstream of the mitochondria during CD95-mediated death through the inhibition of caspase 3. This inhibition prevents mitochondrial protein release and loss of membrane potential and further shows that the activity of caspase-3 is required for this mitochondrial amplification of death receptor signals. Finally, by preventing caspase 3-dependent mitochondrial amplification, XIAP not only protects cells from apoptosis but also supports the long-term proliferative capacity of cells following CD95 activation.
| ACKNOWLEDGMENTS |
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This work was supported in part by the University of Michigan Biomedical Scholars Program (to C.S.D.) and grants R01 GM65813 (to L.H.B.), GM20435 (to E.C.), and T32 CA09676 (to J.C.W.) from the National Institutes of Health.
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Supplemental material for this article may be found at http://mcb.asm.org/. ![]()
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