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Molecular and Cellular Biology, November 2004, p. 9470-9477, Vol. 24, No. 21
0270-7306/04/$08.00+0 DOI: 10.1128/MCB.24.21.9470-9477.2004
Copyright © 2004, American Society for Microbiology. All Rights Reserved.
Naoko Niimi,1
Yasuaki Aratani,1
Keiko Takiguchi-Hayashi,2* and
Hideki Koyama1*
Kihara Institute for Biological Research and Graduate School of Integrated Science, Yokohama City University, Totsuka-ku, Yokohama,1 Mitsubishi Kagaku Institute of Life Sciences, Machida-shi, Tokyo, Japan2
Received 27 February 2004/ Returned for modification 29 March 2004/ Accepted 5 August 2004
| ABSTRACT |
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| INTRODUCTION |
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and to ligate the nick (6). We and others previously showed that Polß-deficient mice exhibit a reduced size and weight and die with a respiratory defect immediately after birth (13, 42). In Polß-deficient mice, extensive cell death (apoptosis) occurs in postmitotic neurons in the developing central and peripheral nervous systems (42). This neuronal apoptosis is closely associated with the period between the onset and cessation of neurogenesis. Abnormalities in embryonic tissues other than the nervous system have not yet been reported (13, 19, 21). Therefore, we suggested that Polß plays an essential role specifically in the development of the nervous system (42). However, the cause of this neuronal apoptosis remains entirely unknown. Mouse embryonic fibroblast cells in culture, derived from a Polß knockout mouse, are viable and show normal growth characteristics (41). Although the mutant cells exhibit BER defects, as evidenced by increased sensitivity to DNA alkylating agents, their cell extracts still retain an activity to repair a damaged base residue in DNA substrate (6), indicating that there are both Polß-dependent and -independent BER pathways in vivo.
The tumor suppressor protein p53 plays a prominent role in the maintenance of genomic integrity (27). It is activated by different types of DNA damage, including single-strand breaks (SSBs), double-strand breaks (DSBs), and adducts, which are generated by endogenous or exogenous mechanisms. The activated p53 has a choice of cell cycle arrest for repair or apoptosis, depending on the level of damaged DNA; i.e., unless the damage is repaired, p53 leads to apoptosis. Recent studies show that p53 directly interacts with Polß, stimulating BER activity (37, 50). In the nervous system, it has been shown that p53 regulates neuronal apoptosis after neuronal injury induced by excitotoxins, hypoxia, and ischemia that cause oxidative damage (3, 29, 33, 47). In p53-deficient mice, kainic acid excitotoxicity- or ischemia-induced brain damage is significantly reduced (10, 34). These observations suggest the involvement of p53 in the control of neuronal apoptosis.
A close link between DNA damage and neurodegeneration appears evident from many pathological data and observations with mouse knockouts (8, 38). In mice deficient in DNA ligase IV (Lig4) and XRCC4, the main components of nonhomologous-end-joining apparatus for DSB repair, differentiating neurons undergo massive cell death (4, 14, 17, 22). However, this apoptosis is completely rescued by p53 deficiency (15, 16). It would be important to examine whether neuronal cell death found in Polß-deficient mice (42) is mediated by p53 activation. Here we study a potential role for p53 in the phenotypes, including neuronal cell death associated with Polß deficiency. We found that p53 deficiency rescues the neuronal apoptosis in a Polß-deficient background. However, it should be noticeable that Polß/ p53/ mice still exhibit cytoarchitectural defects in the development of the nervous system and die shortly after birth. These observations strongly suggest that Polß is crucial for the differentiation process of specific neuronal cell types.
| MATERIALS AND METHODS |
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Histology, immunohistochemistry, and TUNEL assay. Embryos were perfused with 4% paraformaldehyde and 7% picric acid in 0.1 M sodium phosphate buffer (pH 7.4); the brain was removed and postfixed in the same fixative for 2 h, equilibrated with 25% sucrose-phosphate-buffered saline, frozen in OCT compound (Sakura Finetechnical Co.) and sectioned on a cryostat (10 µm). The sections were incubated with rabbit anti-p53 polyclonal antibody CM-5 (Novocastra Laboratories, 1:3,000), rabbit anti-cleaved caspase-3 polyclonal antibody (Cell Signaling Technology; 1:100), mouse anti-PCNA monoclonal antibody PC10 (Sigma; 1:100), mouse anti-neuron specific type-III ß-tubulin monoclonal antibody Tuj1 (BabCO; 1:1,000), mouse anti-phosphorylated neurofilament SMI31 (Sternberger Monoclonal Antibodies; 1:4,000), and rabbit anti-calbindin/spot 35 polyclonal antibody (a kind gift of T. Yamakuni) (1). Cy3 or horseradish peroxidase-conjugated antibody was used for a secondary antibody to visualize primary antibody. TSA Biotin System (Perkin-Elmer Life Sciences) was applied to anti-p53, anti-calbindin immunohistochemistry. The TUNEL (terminal deoxynucleotidyltransferase-mediated dUTP-biotin nick end labeling) assay was performed on cryosections by using 0.12 U of TdTase (Roche)/µl with 0.5 µM biotin-14-dATP (Invitrogen) in 1x TdT buffer (Roche) with 1.5 mM CoCl2. Horseradish peroxidase-conjugated biotin (Jackson Immunoresearch Laboratories) was used for signal detection. Cell nuclei were stained with DAPI (4',6'-diamidino-2-phenylindole) for immunofluorescence. Cresyl violet (Sigma) staining was performed to show neuronal architecture.
Western blot analysis. Cell extracts were prepared from developing telencephalons in E13.5 embryos, electrophoresed in an 8.0% sodium dodecyl sulfate-polyacrylamide gel, and transferred to an Immobilon membrane (Millipore) as described previously (42). The membrane was probed with anti-human phospho-p53 (Ser-15) antibody (Cell Signaling Technology; 1:1,000) and peroxidase-conjugated goat anti-rabbit immunoglobulin G (Chemicon) and detected with enhanced chemiluminescent detection reagents (ECL Plus kit; Amersham).
| RESULTS |
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-aminobutyric acid (GABA) in the CP of the neocortex. A great number of neuronal apoptotic cells were observed in both the lateral ganglionic eminence and the medial ganglionic eminence in Polß/ p53+/+ embryos at E13.5 (compare Fig. 3A and B). We therefore examined whether GABAergic interneurons existed in the E18.5 neocortex. The interneurons in developing neocortex are known to express calbindin D28k (Calbindin), an intracellular calcium-binding protein (2, 32). In Polß/ p53+/+ embryos (Fig. 5K), we found a significant decrease in the number of calbindin-positive cells in the CP compared to wild-type embryos (Fig. 5J). More importantly, this decrease was not rescued by p53 deficiency in Polß/ p53/ embryos (Fig. 5L). Taken together, these data, shown in Fig. 5, indicate that p53 deficiency does not completely rescue developmental defects in the central nervous system, associated with Polß deficiency. These phenotypes are in sharp contrast to those of Lig4/ p53/ and XRCC4/ p53/ mice, which can be alive for several weeks after birth. These results suggest a crucial role for Polß in the formation of the intact neuronal circuit and migration of certain neuronal cell types.
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| DISCUSSION |
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The onset of p53-dependent repair or apoptosis is determined by the level of accumulated damaged DNA (36). There is ample biochemical evidence for functioning of Polß mainly in the short-patch BER pathway to repair SSBs, which are mostly generated as intermediates of damaged bases metabolized by DNA glycosylase and AP endonuclease (46). Mouse embryonic fibroblasts defective in Polß are highly sensitive to DNA alkylating agents but not to X-ray radiation (41, 42), supporting in vivo that Polß deficiency leads to defects in SSB repair but not in DSB repair. Thus, Polß deficiency should result in increased levels of SSBs, even if the Polß-independent long-patch BER is able to partially substitute for the short-patch BER. The increased SSB levels would stabilize and activate p53, leading to apoptosis during neuronal differentiation in Polß/ mice. In mice defective in Lig4, XRCC4, Ku70/80, or XRCC2, which all function in DSB repair, differentiating neurons undergo massive apoptosis (4, 11, 14, 17, 22). Therefore, in these mice, unrepaired DSBs are thought to be the cause of the apoptosis (4, 11, 14, 17, 22). The apoptosis in Lig4/ and XRCC4/ embryos is rescued by p53 deficiency (15, 16). Lig4/ p53/ and XRCC4/ p53/ neonates can survive several weeks after birth without behavioral or neurological abnormalities. This is in sharp contrast with our observation that Polß/ p53/ neonates die shortly after birth. The degree and quality of rescue by p53 deficiency in repair-deficient mice appear to vary depending on the type and level of DNA damage. As discussed above, in Polß/ mice, the damage is most likely SSBs, but the possibility that these SSBs are subsequently converted into DSBs in the final DNA replication of neuronal progenitor cells cannot be ruled out.
In Polß/ p53/ mice at E13.5, early steps of neuronal differentiation seem to proceed normally, as judged by immunohistochemical analysis (Fig. 4). However, at E18.5, these and Polß/ p53+/+ mice displayed serious cytoarchitectural defects in the major axonal tract (Fig. 5E and F) (with more aberrant axonal tracts in the striatum [Fig. 5H and I]) and the migration in GABAergic interneurons (Fig. 5K and L). These results suggest that, although p53 deficiency indeed rescues neuronal apoptosis, these neurons are still incomplete as mature ones, implying that the deficiency cannot fully restore the neuronal development of at least certain cell types. The brain is composed of remarkably complex neuronal cell types and networks. In the development of the brain, cell migration, axon growth, and pathfinding are fundamental processes (12). Recent studies with knockout mice have identified a number of molecules responsible for such processes (30, 32). Loss of these molecules severely affects the brain development and is critical for survival. The abnormal development of the nervous system observed in both Polß/ p53/ and Polß/ p53+/+ mice at E18.5 may be responsible for death shortly after birth. In Lig4/ p53/ or XRCC4/ p53/ mice, severe defects in lymphogenesis are never recovered by p53 deficiency, implying that Lig4 or XRCC4 is a critical factor for lymphogenesis (15, 16). Similarly, our finding that the neuronal differentiation in Polß/ mice is not completely rescued by p53 deficiency strongly suggests that Polß is a critical factor for neurogenesis; that is, Polß may absolutely be required for neuronal differentiation.
The reason why Polß is required for neuronal differentiation remains obscure. One possibility is that in neuronal differentiation, a large amount of damaged bases and SSBs are generated by reactive oxygen species, which might occur particularly in some neuronal cell types actively undergoing migration and/or axon pathfinding. Recently, the Polß-dependent pathway was shown to be induced in response to oxidative base damage (7). Polß might specifically be required to repair those damaged bases and SSBs. Thus, Polß deficiency would lead to increased levels of DNA damage and activation of p53, eventually resulting in apoptosis. A second possibility is that Polß is involved in chromatin remodeling and transcription in neuronal differentiation. When neuronal progenitor cells become postmitotic neurons, they exit cell cycle and drastically alter the pattern of gene expression from immature to mature neurons (12). Transcriptional activation of a gene involves recruitment of not only a sequence-specific DNA-binding protein but also a coactivator complex, including proteins with chromatin-modifying activity. For example, DNA topoisomerase IIß alters DNA topology and forms complexes with proteins involved in chromatin remodeling and transcription (25, 44). The enzyme-deficient mice show defects in the laminar organization of the neocortex and motor axon growth, resulting in a breathing impairment and death of the pups shortly after birth (31, 49). This finding suggests that the control of chromatin reorganization is indispensable for neuronal differentiation. Interestingly, we note that transcriptional coactivator p300 forms a physical and functional interaction with Polß (23). p300 integrates a diverse signaling pathway for a number of sequence-specific transcription factors and activates transcription through chromatin remodeling via intrinsic histone acetyltransferase activity (20). Therefore, in association with p300 or related proteins, Polß might function to maintain the integrity of genes being, or to be, expressed in certain neuronal cell types. A third possibility is that during neuronal differentiation, a genomic rearrangement factor(s) is expressed and generates a certain type of DNA damage (repairable by Polß) to initiate a specific differentiation. In the immune system, the molecular mechanism of diversity by rearrangement of the immunoglobulin or T-cell receptor gene clusters is well understood (43). In V(D)J recombination, the lymphocyte-specific endonucleases RAG1 and RAG2 initially cleave specific recognition sequences in immunoglobulin loci, followed by completion of rearrangements through DSB repair by the action of nonhomologous-end-joining factors (18). Similarly, in the nervous system, neuronal diversity might be created by such genomic rearrangement (9, 48). If this is the case, DNA repair by Polß would be an essential part of the diversity mechanism.
In conclusion, our studies show that p53 deficiency dramatically rescues neuronal apoptosis associated with Polß deficiency, indicating that p53 mediates the apoptotic process in the nervous system. However, p53 deficiency cannot restore complete differentiation of neuronal progenitors and leads to lethality shortly after birth. These observations suggest a crucial role for Polß in differentiation of specific neuronal cell types. In addition, it is evident that in neuronal differentiation, p53 acts as a gatekeeper to maintain genomic stability against various types of DNA damage (27). Further studies will be needed to elucidate the precise role of Polß in neurogenesis.
| ACKNOWLEDGMENTS |
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N.S. is a recipient of Research Fellowship of the Japan Society for the Promotion of Science for Young Scientists. This study was supported in part by a Grant-in-Aid for Scientific Research (C) from the Ministry of Education, Culture, Sports, Science, and Technology of Japan.
| FOOTNOTES |
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Present address: Graduate School of Frontier Biosciences, Osaka University, Suita, Osaka 565-0871, Japan. ![]()
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