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Molecular and Cellular Biology, November 2005, p. 9621-9631, Vol. 25, No. 21
0270-7306/05/$08.00+0 doi:10.1128/MCB.25.21.9621-9631.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.
D. Masson,3
S. Solier,1
A. Sequeira-Legrand,1
I. Dugail,4
S. Lemaire-Ewing,3
L. Desoche,1
E. Solary,1 and
L. Corcos1*
INSERM U517, IFR100, Faculté de Médecine, 7 bd. Jeanne of Arc, 21000 Dijon, France,1 Laboratoire de Biologie Moléculaire et Cellulaire, Faculté des Sciences Gabriel, 6 bd. Gabriel, 21000 Dijon, France,2 INSERM U498, IFR100, CHRU le Bocage, 7 bd. Jeanne of Arc, 21000 Dijon, France,3 INSERM U465, Centre des Cordeliers, 15 rue de l'Ecole de Médecine, 75270 Paris, France4
Received 22 April 2005/ Returned for modification 18 May 2005/ Accepted 16 August 2005
| ABSTRACT |
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| INTRODUCTION |
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One of the caspases involved in apoptosis is caspase-2 (Casp-2), whose activation can precede mitochondrial permeabilization in some proapoptotic paradigms (26, 35, 37), an effect that appears to involve processing of the zymogen but not always the associated catalytic activity (38). In addition, caspase-2 has recently been shown to participate in the inflammatory response upon recruitment in a protein complex with TRAF-2 and RIP1 and induction of NF-
B and p38 mitogen-activated protein kinase activation (25). Two main caspase-2 isoforms may be synthesized. Caspase-2L is proapoptotic (6, 50), whereas caspase-2S can oppose some of the apoptotic effects triggered by caspase-2L (7, 50). However, we have recently shown that the Casp-2S isoform encoding mRNA is subjected to nonsense-mediated decay in many human cell types (47). Therefore, most of the biological activity of caspase-2 is likely to depend on expression of the long caspase-2L isoform. We have recently reported the isolation and initial analysis of the human CASP-2 gene promoter activity (27). This promoter region allows mRNA initiation from separate domains of the two main caspase-2 transcripts. The CASP-2L promoter region is much more active than the downstream CASP-2S promoter, in good correlation with the respective levels of the transcripts found in the majority of cells and tissues (50).
A survey of putative transcription factor binding sites within the 5'-flanking region of the CASP-2 gene revealed the presence of several sites that can be recognized by sterol regulatory element binding proteins (SREBPs). These sites are found in the promoter region of genes involved in lipid homeostasis, encoding enzymes involved in the cholesterol or triacylglycerol/phospholipid synthesis pathways, such as 3-hydroxy-3-methylglutaryl coenzyme A (HMG-CoA) reductase or farnesyl diphosphate synthase (FPP synthase) (11), and the fatty acid synthase (FAS) (28) or low-density lipoprotein receptor (LDLr) (51) (for a review, see references 3, 19, and 40). SREBP proteins are endoplasmic reticulum (ER)- and nuclear membrane-bound 125-kDa transcription factors with a basic helix-loop-helix leucine zipper structure, involved in the maintenance of lipid homeostasis (17, 33, 44). Three major SREBP isoforms are known in humans, mice, and hamsters: SREBP-1a and SREBP-1c are encoded by the same gene through the use of separate transcription start sites, whereas SREBP-2 is encoded by a distinct gene (22, 29). SREBP-1c, which harbors a short N-terminal acidic domain, is a much weaker transactivator than SREBP-1a and SREBP-2 (45). When sterol levels are low, i.e., in response to statins, HMG-CoA reductase inhibitors, the 125-kDa membrane-bound precursor form of SREBP is transported to the Golgi apparatus by a chaperone protein, the sterol cleavage activating protein, SCAP (2, 3, 21), which is both an escort protein and a sensor of sterol levels. Recently, two additional ER-bound proteins, Insig-1 and Insig-2, have been shown to control the transport of the SCAP-SREBP complex to the Golgi apparatus (for a review, see reference 36), where SREBPs are sequentially cleaved by the S1P and S2P proteases (3, 39), which leads to the release of the 68-kDa transcriptionally active N-terminal domain of the protein. This fragment dimerizes, migrates into the nucleus, helped by importin ß (31, 32), and binds to sterol regulatory elements (SREs) or to E-box sequences to enhance transcription of target genes (3, 9). In addition to the sterol regulatory cleavage system, rapid degradation by the ubiquitin proteasome pathway (16) and a feed-forward regulation mediated by SREs present in the promoters of the SREBP-1a and SREBP-2 genes (1, 41) control SREBP activity in the nucleus. The three isoforms play partially different roles in lipid homeostasis. SREBP-1c and -1a are involved in fatty acid metabolism, and SREBP-1c appears to be a mediator of insulin/glucose signaling in lipogenesis (15), whereas SREBP-2 regulates both cholesterogenesis and lipogenesis in vitro and in vivo (34).
The identification of several putative DNA binding sites for SREBP proteins in the promoter region of the human CASP-2 gene prompted us to investigate the possible roles of these sites in the regulation of CASP-2 gene expression. Our results demonstrate that the CASP-2 gene is a member of the SREBP-responsive gene battery in human cells. Strikingly, suppression of CASP-2 gene expression strongly reduced the increase in cellular lipid levels brought about by overexpression of SREBP-2. Thus, besides its role in cell death, caspase-2 activity may be required as part of the adaptative response of human cells to variations in cholesterol and triacylglycerol levels. The implication of these findings may be twofold. First, they support and extend the notion that disturbance of lipid homeostasis may play an important role in the sensing of apoptosis stimuli. Second, they might suggest new venues of investigation to address the mechanism underlying some lipid disorders.
| MATERIALS AND METHODS |
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For lovastatin treatment (Sigma-Aldrich, Saint-Quentin Fallavier, France), all cell lines were preincubated in 5% lipoprotein-deficient serum (Sigma-Aldrich) during 24 to 36 h. Lovastatin was dissolved in dimethyl sulfoxide. The final concentration of dimethyl sulfoxide did not exceed 0.5% (vol/vol), a concentration that did not induce any toxicity.
Plasmid constructions. Fragments from the promoter region of the human CASP-2 gene were inserted into the promoterless pGL3-basic vector (pGL3b; Promega, Charbonnières, France) or into the simian virus 40 (SV40) promoter-containing pGL3-promoter vector (pGL3 pm; Promega). Progressive deletion constructs of the CASP-2 gene 5'-flanking region were produced by PCR. Five-prime deletion constructs containing the CASP-2L transcription start site were inserted into pGL3b, and 3' deletion constructs were inserted into pGL3 pm, under the control of the SV40 promoter. All plasmids were purified with the "Nucleobond ax" extraction kit (Macherey-Nagel, Hoerdt, France) and verified by sequencing (Genome Express, Meylan, France). Sequences of the primers used (Proligo, France) are available in supporting information (see Table S1 in the supplemental material). These primers also contain KpnI and XhoI or BglII restriction enzyme sites to facilitate subsequent cloning steps.
Plasmids encoding SREBP-1a and SREBP-2 transcriptionally active forms were a kind gift from T. F. Osborne (University of California, Irvine, CA). SREBP-1a and SREBP-2 expression was driven by the cytomegalovirus (CMV) promoter from the pCMV5 vector. The luciferase reporter vector for the proximal region of the LDL-receptor promoter (171 to +57 inserted in pGL3b vector) was a kind gift from T. Huby (Inserm U551, Paris, France).
Site-directed mutagenesis. Point mutations were introduced with the QuikChange site-directed mutagenesis kit (Stratagene, La Jolla, CA) according to the manufacturer's instructions. Briefly, 40 ng of parental vectors was used with the relevant oligonucleotides, and PCR was performed for 18 cycles. The mutations were detected by sequencing. PCR primer sequences are available in the supplemental material (see Table S2 in the supplemental material).
Adenoviral infections and plasmid and small interfering RNA (siRNA) transfections. Overexpression of the mature form of SREBP-2 (nSREBP-2) or of a dominant-negative form of SREBP-2 (SREBP-2dn) (see Fig. S5 in the supplemental material) was obtained by infection with adenoviruses encoding the active transactivation domain (amino acids 1 to 475) or a truncated transactivation domain (amino acids 294 to 475) of human SREBP-2 fused to the green fluorescent protein (GFP) (Ad-S2n and Ad-S2dn, respectively). A GFP-only-containing adenovirus was used as a control (Ad-C). Cells were infected in serum-containing medium at a multiplicity of infection between 30 and 100 PFU/cell, depending on the experiment, and harvested after 28 h (HepG2) or 36 h (HeLa, HCT116).
Functional promoter activity of the 5'-flanking region of the CASP-2 gene was analyzed using pGL3 luciferase-reporter vectors. The pCMV ß-galactosidase reporter vector (pCMV-ßgal) was used as an internal control for normalization of transfection efficiencies. HepG2 cells were seeded into 24-well plates at the density of 200,000 cells/well 16 h before transfection by the Lipofectamine and lipoplus reagents (Invitrogen, Cergy-Pontoise, France) according to the manufacturer's instructions. One hundred nanograms of each test plasmid, 20 ng of SREBP expression vector, and 20 ng of pCMV-ßgal reporter vector were used for each experiment. After 24 h, cells were harvested and analyzed for luciferase activity using a luciferase assay reagent (Promega) and a luminometer (Lumat LB 9507; EG&G Berthold) or using the ß-galactosidase enzyme assay system (Promega) for ß-galactosidase activity.
Sense and antisense SREBP-2 (sense-strand RNA sequence, 5'-CAACAGACGGUAAUGAUCAUU-3') and caspase-2 (sense-strand RNA sequence, 5'-AAACAGCUGUUGUUGAGCGAA-3') oligoribonucleotides correspond to positions 554 to 574 of the human SREBP-2 mRNA sequence (accession number U02031) and to positions 210 to 230 of the human caspase-2 mRNA sequence (accession number NM_032982). A scrambled caspase-2 siRNA was used as a control (sense-strand RNA sequence, 5'-UAUCAGCGUAAUGGCUAAGGA-3'). All oligonucleotides were purchased from Proligo. Sense and antisense oligoribonucleotides were annealed to generate the double-stranded siRNAs (SREBP-2, siS2; caspase-2, siC2; negative control, sineg) at the final concentration of 100 µM. Cells were plated in serum-containing medium (HeLa) or in serum-free medium (HCT116 and HepG2) without antibiotics the day before transfection and then transfected by adding 5 µl of oligofectamine (Invitrogen) to 5 µl of 20 µM siRNAs (final concentration, 100 nM). Cells were rinsed with medium 4 h after transfection and then maintained in culture for 2 days before analysis.
RT-PCR and quantitative real-time PCR (Q-PCR) analysis. Total RNA was isolated with the nucleospin RNA extraction kit (Macherey-Nagel). Five hundred nanograms of RNA was reverse transcribed and then amplified in one step with the QIAGEN OneStep reverse transcriptase PCR (RT-PCR) kit (QIAGEN, Courtabeuf, France) according to the manufacturer's instructions. The identity of each PCR-generated product with its corresponding cDNA was confirmed by sequencing. Sequences of sense and antisense primers used to amplify human cDNAs (Proligo), hybridization temperatures, and number of cycles performed are available in the supplemental material (see Table S3 in the supplemental material).
For Q-PCR, five hundred nanograms of total RNA was reverse transcribed using Moloney murine leukemia virus RT (Promega) in the presence of oligo(dT) according to the manufacturer's instructions. Then, each sample was tested in duplicate and standardized to the ß2-microglobulin mRNA. In brief, 0.5 µl cDNA, corresponding to about 5 ng, was used as a template with 1x buffer (Quantitect SYBR Green PCR master mix; QIAGEN) and 0.3 µM of each primer (see Table S3 in the supplemental material) in a total reaction volume of 25 µl. Analyses were performed on an ABprism 7700 detector system (Applied Biosystems, Les Ulis, France) with the sequence detector system software.
Chromatin immunoprecipitation assays. Chromatin immunoprecipitation (ChIP) assays were performed using the ChIP-IT kit (Active Motif Europe, Rixensart, Belgium) according to the manufacturer's instructions. Briefly, cells were fixed with 1% formaldehyde for 10 min at room temperature to cross-link DNA with proteins, and then cells were sonicated (10 pulses of 20 s each). After incubation with protein G saturated with salmon sperm DNA, the supernatants were immunoprecipitated with 2 µg of N19 anti-SREBP-2 (SantaCruz/Tebu, Le Perrey en Yvelines, France) or 4 µg of the supplied negative control immunoglobulin G (IgG) antibodies at 4°C overnight. For PCR, 5 µl of eluted DNA was used. The primers used correspond to the S2, S3, and S5 sites of the CASP-2 gene and to the sterol regulatory element (SRE) site of the human FPP synthase gene as a positive control. PCR on material recovered for immunoprecipitation without antibody was also performed as a control. PCR products were visualized on 2% agarose gel containing ethidium bromide. Primers sequences, length of each PCR product, and number of cycles used are available in supporting information (see Table S4 in the supplemental material).
Western blotting and immunofluorescence studies. For total extracts, subconfluent cells were harvested, washed twice in 1x phosphate-buffered saline (PBS), and lysed in boiling buffer (1% [wt/vol] sodium dodecyl sulfate, 1 mM Na3VO4, 10 mM Tris, pH 7.4) containing 0.1 mM phenylmethylsulfonyl fluoride, 10 µg/ml aprotinin, and 5 µg/ml leupeptin for 10 min at 4°C. Forty micrograms of proteins was boiled in Laemmli buffer for 5 min before separation by sodium dodecyl sulfate-polyacrylamide gel electrophoresis. Proteins were then electroblotted onto polyvinyl difluoride membranes (Bio-Rad, Ivry-sur-Seine, France), and nonspecific binding sites were blocked for 2 h at room temperature by 6% (wt/vol) fat-free milk before an overnight incubation at 4°C with specific antibodies: mouse anti-human procaspase-2 (1:1,000), rabbit anti-human procaspase-3 (1:1,000), and goat anti-human SREBP-2 (N19; 1:250). Anti-human HSC70 antibody (1:7,500; SantaCruz/Tebu) was used as a loading control. Primary antibodies were detected with horseradish peroxidase-conjugated goat anti-mouse or goat anti-rabbit IgGs (1:10,000; Jackson ImmunoResearch Laboratories, Villepinte, France) or rabbit anti-goat IgGs (1:5,000; Dako, Glosturp, Denmark). Blots were revealed using an Enhanced Chemioluminescence detection kit (Amersham, Les Ulis, France).
Note: for SREBP protein detection, cells were treated with 25 µg/ml ALLN (calpain I inhibitor; Roche, Meylan, France) for the last 3 h before harvesting, in order to stabilize the short-lived nuclear forms, as described previously (16).
For immunofluorescence analysis (see Fig. S7 in the supplemental material), HeLa cells were seeded in lab-Tek II chamber slides (15,000 cells/well). Cells were fixed in 2% paraformaldehyde for 10 min at 4°C, washed three times, blocked with 50 mM NH4Cl for 10 min, and permeabilized in PBS-0.1% Triton X-100 for 4 min. Cells were then incubated with primary mouse anti-human procaspase-2 monoclonal antibody (1:75) or mouse anti-human procaspase-3 polyclonal antibody (1:100), used as a negative control (Pharmingen, Pont de Claye, France) for 30 min in PBS, 1% bovine serum albumin. After washing, cells were incubated with 488-Alexa goat anti-mouse antibody (1:1,000) for 20 min and washed three times with PBS. Immunofluorescence was analyzed using a fluorescence microscope (Nikon, Champigny, France).
Nile Red and Oil Red O staining. Lipid level analysis was performed by using two different in situ staining methods, which both show high specificity for neutral lipids. Oil Red O and Nile Red were from Sigma-Aldrich. Oil Red O was resuspended at 0.5% (wt/vol) in 98% propane-2-ol, and Nile Red was prepared at 1 mg/ml in acetone and stored at 4°C protected from light.
HCT116 or HeLa cells were seeded in 6-well or 24-well plates, transfected with siRNAs as described above, and infected 24 h later with Ad-control or Ad-S2n adenoviruses at 30 PFU/cell during another 36 h. For Nile Red staining, cells were incubated with 20 ng/ml Nile Red during 30 min at 37°C in the dark. Fluorescence measurements were then made with an EPICS ELITE Coulter cytometer with a 488-nm wavelength excitation from an argon-ion laser at 15 mW. The optical filters were set up to capture GFP emission at 525 nm and Nile Red at 610 nm, corresponding to total lipid detection (14). Analyses were performed on a list mode of 104 events gated in GFP-positive cells and analyzed with the Win MDI software. For Oil Red O staining, cells were fixed in 4% (vol/vol) formaldehyde during 15 min, washed in 1x PBS and in 60% propane-2-ol, and then stained with freshly diluted (60% stock solution in water) and filtered Oil Red O for another 15 min. Cells were rinsed in 60% propane-2-ol, and lipid droplets were detected by light microscopy.
Determination of total cholesterol and triacylglycerol content. Cells were seeded in 25-cm2 flasks (250,000 or 500,000 cells/flask for HeLa or HCT116, respectively), transfected with siRNAs, and infected 24 h later with Ad-control or Ad-S2n adenoviruses at 30 PFU/cell during another 36 h. Cholesterol and triacylglycerol levels were determined enzymatically with the method of Danno (4), adapted as follows. Briefly, cells were washed in 1x PBS, resuspended in tert-butanol, and centrifuged for 10 min at 10,000 rpm. The same volume of methanol-1% Triton X-100 was added to the lipid phase. Total cholesterol and triacylglycerol content was then determined by enzymatic and colorimetric methods with the "cholesterol 100" and "triglycerides 25" kits (Abx Diagnostics, Montpellier, France) and read on a Victor2 1420 multilabel counter (Perkin-Elmer, Boston, MA).
Computer analysis of transcription binding sites. All prediction analyses for the in silico identification of putative transcription factor binding sites were performed with the MatInspector software (Genomatix), which uses matrix determination to identify DNA binding sites.
Statistical analyses. All results are presented as means (± standard deviations) from at least triplicate determinations, unless otherwise stated. Statistical analysis was performed using the two-sided Student t test.
| RESULTS |
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As shown in Fig. 1C, the smallest 3' deletion (d3'c) was very highly responsive to either SREBP protein. By contrast, d3'b was unresponsive, and the larger d3'a deletion was only weakly responsive, mostly to SREBP-2. This 3'-deletion analysis indicated that the putative SREBP S1 and S2 binding sites played little or no role in SREBP responsiveness, whereas the S3 site had a major impact on the response.
Mutations of the putative SREBP binding sites alter CASP-2 gene promoter activity. In order to analyze the functional activity of the putative SREBP binding sites, we prepared and tested mutants of each of these sites on 5'- and 3'-deletion constructs by cotransfection in HepG2 cells. As shown in Fig. 2A and B, mutation of the S4, S1, and S2 sites had no effect on SREBP transactivation by either SREBP isoform, in agreement with the results from 3'-deletion analyses (Fig. 1C). However, the transactivating potential of both SREBP isoforms was similarly influenced by mutations of the S3 and S5 sites. S3 site mutation reduced transactivation by SREBP-1a and -2 by 20 to 28% in the context of the CASP-2 gene promoter and by up to 57% in the context of the SV40 promoter. Mutation of both sites of the S5 complex abolished transactivation (Fig. 2A). To confirm the major implication of the S3 and S5c sites, we tested the effect of mutations of either site in the context of the largest CASP-2 gene promoter fragment. As shown in Fig. 2C, S3 site mutation slightly reduced transactivation by either SREBP-1a or -2, whereas mutations of S5c reduced it by up to 85%. Finally, mutations of both the S3 and S5c sites (m3/m5c) totally abolished transactivation by each SREBP. Similar results were obtained in HCT116 cells (data not shown). Taken together, these results demonstrate that most of the transcriptional activity of the CASP-2 gene observed upon overexpression of SREBP proteins may depend on the identified binding sites for these proteins, the S3 and especially the S5c sites.
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| DISCUSSION |
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In view of these findings, we wished to address the possibility that the controlled expression of the CASP-2 gene could be linked to a novel function of caspase-2, i.e., the control of lipid levels in cells. As expected, siRNA-mediated silencing of SREBP-2 abrogated the rise in lipids triggered by SREBP-2 overexpression. Much strikingly, however, this rise in cellular lipid levels was also strongly dampened by Casp-2 mRNA silencing. This observation strongly suggests that caspase-2 may participate in SREBP-2-driven lipid synthesis and/or accumulation in human cells.
How caspase-2 is connected to lipid biosynthesis pathways in human cells is unclear at this stage. Overexpression of procaspase-2L did not trigger any rise in lipids, nor did it lead to an improved response to SREBP-2 overexpression, which suggests an additional requirement of some limiting factor for caspase-2 activity, a situation that may not be symmetrical with caspase-2 silencing (data not shown). Indeed, caspase-2 function has been shown to depend on its recruitment within macromolecular protein complexes, such as the so-called PIDDosome, in which protein partner stoichiometry might be tightly controlled (49). In addition, use of the VDVAD-fmk permeant caspase-2 inhibitor did not block the increased lipid levels induced by SREBP-2 in any of the cell lines (data not shown), which indicates that caspase-2 enzymatic activity could be dispensable. It was in fact recently shown that caspase-2 activity might not be required to fulfill its role as an apoptotic initiator caspase (10, 38) or its role in inflammation (25). If indeed caspase-2 catalytic activity is dispensable for enhancing the activation of lipid synthesis by SREBP-2, presumably caspase-2 function may be largely related to its ability to interact with other cellular macromolecules, either proteins or lipids (10). Alternatively, since the activity of caspase inhibitors in live cells may not be fully quantitative, their lack of effects in some experimental paradigms might not be a fully reliable indicator of caspase activity and therefore of caspase function.
As an initial attempt to try to understand how caspase-2 may be able to exert some control on lipid synthesis and/or accumulation, we looked at expression of SREBP-2 target genes following siRNA-mediated CASP-2 gene silencing. In all cases surveyed, i.e., for the HMG-CoA reductase, the LDLr, and the FAS genes, a slight but consistent 17 to 30% reduction in the stimulation brought about by SREBP-2 overexpression was observed (see Fig. S8 in the supplemental material). Such a pleiotropic effect might be best explained by an activity of caspase-2 on a regulatory step common to expression of all these genes. One immediate possibility might be that physiological levels of caspase-2 would be able to interfere with SREBP-2 function. For instance, enzymatically active caspase-2 could degrade SREBP-2 into a cleavage product that would drive better transcriptional activation. However, upon use of recombinant active caspase-2, we obtained no evidence that caspase-2 could cleave SREBP-2, whereas caspase-3 was able to do so (see Fig. S9 in the supplemental material), as previously reported (52). Alternatively, caspase-2 could degrade inhibitory transcription factors, thus activating cholesterol and/or triacylglycerol synthesis. One candidate protein is the ATF6 transcription factor, an ER stress-inducible protein that undergoes proteolysis by the same S1P and S2P proteases as SREBPs (54) and that has been shown recently to antagonize SREBP-2 activity upon direct interaction. Indeed, the nuclear form of ATF6 is able to form a complex with the SRE-bound nSREBP-2, which leads to a strong impairment of SREBP-2 transcriptional activity (55). A schematic model that summarizes our observations is presented in Fig. 7.
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In conclusion, in addition to its role in cell death and to the recently identified role in inflammation (25), caspase-2 appears to be a positive regulator of cholesterol and triacylglycerol homeostasis in human cells, which adds to the growing list of nonapoptotic functions of caspases (13). It is tempting to speculate that any condition that would dampen sterol levels could activate SREBP binding sites from the CASP-2 gene, which would then be turned on to provide either a direct trigger or an amplification loop aimed at restoring normal cholesterol or triacylglycerol levels. Depending on the activity of SREBP proteins, caspase-2 could thus act as a second-order sensor for satisfying the lipid demand.
| ACKNOWLEDGMENTS |
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E. Logette was a recipient of a fellowship from the Ministry of Research and Education. S. Solier was appointed by the University Hospital, Dijon. This work was supported by the Ligue Nationale Française contre le Cancer, the Conseil Général de Bourgogne, and the INSERM.
| FOOTNOTES |
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Supplemental material for this article may be found at http://mcb.asm.org/. ![]()
Present address: EA948, Faculté de Médecine, 22 avenue Camille Desmoulins, 29238 Brest Cedex 3, France. ![]()
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