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Claas Otto,1,2,3,
Ellis Jaffray,4
Camille Du Roure,1,2,3,¶
Youssef Bakri,1,2,3,5
Laurent Vanhille,1,2,3
Sandrine Sarrazin,1,2,3
Ronald T. Hay,4 and
Michael H. Sieweke1,2,3*
Centre d'Immunologie de Marseille-Luminy, Université de la Méditerranée, Campus de Luminy, Case 906, 13288 Marseille Cedex 09, France,1 Institut National de la Santé et de la Recherche Médicale, Marseille, France,2 Centre National de la Recherche Scientifique, Marseille, France,3 James Black Centre, College of Life Sciences, University of Dundee, Dow Street, Dundee DD1 5EH, United Kingdom,4 Laboratoire de Biochimie-Immunologie, JER3012, Agence Universitaire Francophone, Faculté des Sciences, Rabat, Morocco5
Received 24 September 2006/ Returned for modification 6 November 2006/ Accepted 16 May 2007
| ABSTRACT |
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| INTRODUCTION |
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To maintain homeostatic control in rapidly regenerating tissues, such as the hematopoietic system, cellular differentiation is balanced by the expansion of immature progenitors. At the molecular level, these competing programs are directed by antagonistic transcription factors. MafB appears to engage in such an antagonistic relationship with the c-Myb transcription factor in the control of myelomonocytic differentiation. MafB expression increases during differentiation (2, 13, 24, 29, 43), but c-Myb expression is high in immature cells and down-regulated as the cells differentiate towards macrophages (5, 12, 36, 44). While MafB induces differentiation (2, 16, 29), c-Myb promotes proliferation and inhibits differentiation (23, 37). This is particularly evident for the constitutively active Myb allele of E26 virus (v-Myb), which can maintain the proliferation of chicken myeloid progenitors and block their differentiation towards macrophages without immortalizing them (3, 23, 32). By temperature inactivation of the ts21 allele of v-Myb, it is possible to relieve this differentiation block and permit macrophage differentiation (2, 3, 29). Reciprocally, induction of Myb activity in macrophages results in their rapid dedifferentiation (3, 7, 36). It thus appears evident that MafB and Myb transcription factors play antagonistic roles in macrophage differentiation, but it remains unclear how these competing activities are controlled to influence the balance in one or the other direction.
Covalent posttranslational modification with small ubiquitin-like proteins, particularly SUMO-1 (28), has been recognized to play an important role in controlling various cellular functions, including transcription factor activity (15, 17-19, 21, 47). The enzymatic machinery for the covalent attachment to target proteins resembles that of ubiquitination but utilizes different components (28). A single SUMO-specific E2-conjugating enzyme (Ubc9) and a small number of SUMO-specific E3 ligases have been identified (28, 40). They mediate the attachment of SUMO to lysine residues within the consensus sequence
KXE, where
stands for a hydrophobic amino acid and X for any amino acid (28). The process is reversible, and SUMO proteins can be removed from their targets by specific proteases (SENP1, SENP2, SENP3, SENP5, SENP6, and SENP7). In contrast to ubiquitination, SUMO modification does not directly target proteins for degradation but can have diverse effects on stability, activity, cellular localization, or protein interaction (15, 17, 28, 40, 47). The central importance of SUMO modification for the regulation of cellular, particularly nuclear, processes has been demonstrated in a number of genetic experiments. SUMO conjugation and deconjugation are required for viability in virtually all eukaryotes from Saccharomyces cerevisiae to mice (35, 48).
SUMO modification of transcription factors has generally been observed to repress transcriptional activity (15, 17, 18, 21, 47). Although in most cases these effects were observed only in transient-transactivation assays and biological consequences were not investigated or could not be detected (10), transgenic studies also implicate SUMO modification in transcriptional repression (34). Gain-of-function experiments in Caenorhabditis elegans (6) and Xenopus laevis (46) further suggest that SUMO modification can also modulate transcription factor activity in developmental processes. Generally, however, little is known about the biological significance of transcription factor SUMO modification in higher vertebrates and particularly its role in controlling the combinatorial action of transcription factors.
Here we demonstrated that MafB is subject to SUMO modification on two principal lysine residues in vitro and in vivo and showed that the absence of SUMO modification on these residues increased transcriptional activity and the abilities to induce macrophage differentiation, inhibit myeloid progenitor expansion, and repress cell cycle progression. Most interesting, however, we observed that direct repression of MafB by v-Myb is strictly dependent on MafB SUMO modification. As a consequence, SUMO modification-deficient MafB can resist v-Myb repression and promote macrophage fate in the presence of dedifferentiating v-Myb activity. Together, these results indicate that SUMO modification of MafB is a potent mechanism to balance myeloid progenitor proliferation and macrophage differentiation by controlling the Myb/MafB transcription factor antagonism. SUMO modification may thus serve an important role in controlling tissue homeostasis in the hematopoietic system.
| MATERIALS AND METHODS |
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NX) cells were grown in DMEM-10% FCS. Both media contained 1% penicillin-streptomycin and 1% glutamine. Primary chicken myeloblast clones were cultured as described previously (29). Polyclonal antibody against MafB was generated by immunizing rabbits with a 17-amino-acid keyhole limpet hemocyanin-coupled internal peptide of mouse MafB and affinity purified by standard procedures or purchased from Calbiochem. Site-directed mutagenesis was performed by PCR on mouse MafB cDNA with overlapping mismatched primers to target the sequences: GTTCGACGTGCGGAGGAGC for lysine 32, GAGCAGCTTCGGCAGGAGGTG for lysine 281, and CAAGGTCCGGTGCGAGAAAC for lysine 297. Single, double, and triple mutants were subcloned in RC/CMV (Invitrogen) or MFG-iGFP (2) or downstream of the internal ribosome entry site (IRES) element in E26-ts21 (29). C-terminal MafB-green fluorescent protein (GFP) fusion constructs were generated by PCR-mediated in-frame cloning of wild-type or mutant MafB into pEGFP-N1 (Clontech). PMI10 was used as an expression plasmid for E26 v-Myb (34).
Virus production.
To obtain primary avian myeloid progenitor clones, hematopoietic progenitors from 2-day chicken embryos (White Leghorn chickens; Ferme Avicole HAAS, Kaltenhouse, France) were infected with E26 virus derivatives as described previously (29). MFG-iGFP retroviruses for infection of HD11v-mybER cells were produced in ecotropic Phoenix (
NX) packaging cells by calcium phosphate precipitation as described previously (2) and pseudotyped by cotransfection of a vesicular stomatitis virus G-protein expression construct (pCMV-VSV-G).
In vitro assays for SUMO-1 modification. SUMO conjugation assays were performed at 37°C for 120 min in 10-µl volumes containing the following: 1 µl of wheat germ-coupled transcription-translation reaction mixture (Promega) with [35S]methionine (Amersham); 1 µg of wild-type or mutant MafB plasmid; 500 ng, 120 ng, and 150 ng of SUMO-1, SAE1/SAE2, and Ubc9 expressed in Escherichia coli (45), 50 mM Tris (pH 7.5), 5 mM MgCl2, 2 mM ATP, 10 mM creatine phosphate, 3.5 U of creatine kinase/ml, and 0.6 U inorganic pyrophosphate/ml. Reactions were terminated by the addition of sodium dodecyl sulfate (SDS) and ß-mercaptoethanol (ß-ME) buffer. Reaction products were separated by denaturing 10% SDS-polyacrylamide gel electrophoresis (10% SDS-PAGE) and analyzed by phosphorimaging.
Assays for in vivo SUMO-1 modification, protein interaction, and Western blotting. For in vivo assays of SUMO-1 modification, QT6 cells were transfected with 200 ng/cm2 of wild-type or mutant MafB expression plasmid, lysed in 5 mM imidazole-containing G buffer (6 M guanidinium-Cl in PT buffer [100 mM Na2HPO4/NaH2PO4, 20 mM Tris-Cl {pH 8.0}, 10 mM ß-ME, 1x protease inhibitor mix]). Lysates were ultrasound treated, incubated with Ni-nitrilotriacetic acid-agarose (QIAGEN) for 2 h and washed for 30 min each with G buffer, buffer W (pH 8.0) (8 M urea in PT buffer), twice with buffer W (pH 6.3)-0.2% Triton X-100 and buffer W (pH 6.3)-0.3% Triton X-100. Matrix-bound protein was eluted with 200 mM imidazole, 5% SDS, 150 mM Tris-Cl (pH 6.7), 30% glycerol, 720 mM ß-ME, and 1x protease inhibitor mix and separated by 10% SDS-PAGE and revealed by Western blotting. Immunoblotting was performed with anti-MafB (1/500), antihemagglutinin tag (anti-HA tag) (1/1,000; Roche), anti-Ubc9 (1/500; Calbiochem), antitubulin (1/3,000; Sigma), and secondary anti-rabbit (Santa Cruz, CA) or anti-rat antibodies conjugated to horseradish peroxidase (Jackson, MN) using ECL detection kit (Amersham) as described previously (29). Glutathione S-transferase (GST) pull-down assays were performed as described previously (29).
Reporter gene assays. QT6 cells were plated at 20,000 cells/cm2, transfected after 24 h by CaPO4 precipitation as indicated, and harvested 48 h later in 40 mM Tris-Cl (pH 7.5)-1 mM EDTA-150 mM NaCl (TEN). The 3xMARE (29) and 3xMRE (36) reporter plasmids have been described previously. Cell lysates were assayed for firefly luciferase activity and normalized to ß-galactosidase activity from a cotransfected RSV-lacZ plasmid as described previously (29).
Phagocytosis assays. Phagocytosis assays were essentially performed as described previously (2, 29) with 250,000 cells in 250 µl medium incubated with 4 µl suspension of 1 µm phycoerythrin (PE)-coated latex beads (F-8851; Molecular Probes) for 2 h. Cells were harvested in TEN, washed three times with medium at 4°C, and analyzed by fluorescence-activated cell sorting (FACS). Mean fluorescence and fluorescence-positive cells were quantified using FloWJo.
Growth rate and cell cycle analysis. A total of 100,000 cells were seeded, and after the indicated time, 10 µl of 5-mg/ml 3-(4,5-dimethylthiazol-2-yl)2,5-diphenyltetrazolium bromide (MTT; Sigma) was added for 5 h at 37°C. Water-insoluble formazan blue formed in viable cells was dissolved in HCl-isopropanol. Optical density was read at 492 nm, and cell number was determined using a standard curve. For cell cycle analysis, QT6 cells were plated at 20,000 cells/cm2, transfected with 200 ng/cm2 GFP fusion plasmids and after 12 h shifted to low serum for 36 h (DMEM-0.5% FCS), trypsinized, washed in phosphate-buffered saline, fixed overnight in 70% ethanol-30%glycerol, and incubated with 1-mg/ml RNase A (Q-Biogen) and 50-ng/ml propidium iodide (Sigma) for 30 min at 37°C. Cell cycle analysis on GFP-positive cells was performed by selecting fluorescence area versus width discrimination on the propidium iodide signal and using the range method (partec) in CellQuest.
siRNA inactivation. Subconfluent 12-well cultures of HEK 293 cells were incubated for 5 h with 130 µl OPTIMEM 1 (Gibco BRL) containing a mix of 6 µl oligofectamine reagent (Invitrogen) and 6 µl of 20 µM small interfering RNA (siRNA) (DHARMACON) that were mixed and preincubated for 20 min according to the supplier's instructions. After overnight addition of 1 ml serum-free DMEM, the cells were again transfected for 5 h with a mixture containing 8 µl oligofectamine, 6 µl of 20 µM siRNA, 400 ng v-Myb expression plasmid, 10 ng MafB or MafB K32,297R expression plasmid, and 200 ng MARE reporter in 130 µl OPTIMEM 1 after appropriate mixing and preincubation, incubated for 24 h in 1 ml serum-free DMEM, and assayed 6 h later for luciferase activity. siRNA duplexes against ubc9 have been described previously (20). Stealth siRNA negative-control duplex (Invitrogen) served as a negative control.
| RESULTS |
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KXE for SUMO modification (Fig. 1B). To test which of these sites were preferentially targeted for SUMO modification, we generated single, double, and triple point mutations of lysine to arginine and subjected them to the in vitro SUMO modification assay. As shown in Fig. 1C, mutation K281R had no effect, mutation K297R had a weak effect, and mutation K32R had the strongest effect. Consistent with this, the double mutant K32,297R showed a dramatic loss of SUMO modification similar to the triple mutant K32,281,297R, whereas the K32,281R mutant was still weakly modified and the K281,297R double mutant was still strongly modified. Together these results indicated that MafB is a substrate for modification with more than one SUMO-1 molecule via lysine 32 as the primary target and lysine 297 as a secondary attachment site. All further experiments were performed with MafB K32,297R as the minimal mutation showing loss of SUMO modification. SUMO-1 modification of MafB in vivo. To determine whether SUMO-1 modification of MafB occurred in vivo, we analyzed protein extracts of RAW264.7 cells, a macrophage line expressing endogenous MafB, by Western blotting with anti-MafB antibody. As shown in the left panel of Fig. 2A, we could indeed detect a more slowly migrating form of MafB that is consistent with SUMO modification. To verify that this more slowly migrating form of MafB was a result of SUMO modification, we cotransfected QT6 fibroblasts with MafB or the SUMO modification-deficient MafB K32,297R mutant with or without HA-tagged SUMO-1 (HA-SUMO-1). MafB proteins were enriched by affinity purification from cell lysates on nickel agarose taking advantage of the intrinsic MafB polyhistidine domains, which confer high binding affinity to chelated nickel matrix, and subsequently immunoblotted with an antibody specific for MafB. As shown in the right panel of Fig. 2A, we could detect the more slowly migrating species only under conditions where both wild-type MafB and HA-SUMO-1 had been cotransfected but not in the absence of HA-SUMO-1 or with the SUMO modification-deficient mutant MafB K32,297R. The low proportion of modified protein observed is consistent with the previously reported small percentage of highly expressed target proteins existing as the SUMO-modified form at steady state, which is likely a reflection of the dynamic nature and potential long-term effects of transient SUMO modification (25). To further confirm that this high-molecular-weight form of MafB corresponded to SUMO-modified MafB, we purified MafB on Ni-agarose and probed a Western blot with antibodies against the HA tag of the cotransfected SUMO-1. This staining revealed again a more slowly migrating species only in the presence of HA-SUMO-1 for wild-type MafB but not mutant MafB K32,297R and of the same size as in the anti-MafB blot (Fig. 2B). Together these results confirmed that SUMO-1 modification via lysine residues 32 and 297 of MafB also occurred in vivo.
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Together these results showed that decreased SUMO modification increased MafB transactivation activity and that the MafB K32,297R mutant mimics the activity of unmodified protein.
Absence of MafB SUMO modification increases its potential to drive macrophage differentiation and inhibit myeloid progenitor growth. We and others have shown previously that expression of MafB in myeloid progenitors promoted macrophage differentiation (2, 16, 29). To investigate whether MafB SUMO modification was important for this biological activity, we used primary transformed avian myeloblasts infected with bicistronic retroviral vectors expressing either MafB or MafBK32,297R mutant from an E26-ts21 retrovirus (29). We measured phagocytic activity in these cells as an indicator of functional macrophage differentiation. We cultured individual myeloid clones for 24 h at 42°C to relieve a differentiation block imposed by the temperature-sensitive ts21 v-Myb allele of E26-ts21 (3) and quantified the ability of the cells to phagocytose fluorescent beads by FACS. As shown in representative FACS profiles of Fig. 4A, MafB expression resulted in macrophage differentiation and conferred significant phagocytic activity to the cells. Expression of MafB K32,297R, however, caused a more dramatic increase in phagocytic activity, both in terms of the number of beads ingested per cell and in the percentage of phagocytic cells (Fig. 4A). Quantitative analysis of several clones confirmed this observation and revealed an approximately threefold increase in the mean phagocytic activity of MafB K32,297R clones over MafB clones (Fig. 4B). Together these data indicated that deficiency for SUMO modification strongly increased the ability of MafB to induce functional macrophage differentiation in myeloid progenitors.
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Together these results suggested that SUMO modification increased the ability of MafB to induce macrophage differentiation and inhibit proliferation in myeloid progenitors.
The absence of SUMO modification enables MafB to overcome a v-Myb-imposed differentiation block. Promotion of macrophage differentiation by MafB in E26-transformed myeloid progenitors requires relief of a v-Myb-imposed differentiation block by temperature inactivation of the v-Myb ts21 allele (2, 29). Surprisingly, cells infected with the SUMO modification-deficient MafB K32,297R mutant frequently acquired a typical macrophage morphology even without a temperature shift, and thus in the presence of active v-Myb, whereas clones expressing control or wild-type MafB did not (Fig. 5A). As shown in Fig. 5B, quantitative analysis of individual clones revealed that about half of MafB K32,297R-expressing clones had 20 to 80% of cells with macrophage morphology after 2 weeks in liquid culture. By comparison, MafB-expressing clones only occasionally showed a small percentage of cells with macrophage morphology. Similarly, all control virus-infected clones had a round and nonadherent myeloid progenitor phenotype with <0.1% macrophage-type cells. Wright-Giemsa staining also revealed cells with typical macrophage morphology in MafB K32,297R-expressing clones but not in MafB-expressing clones or control clones (data not shown). These morphological differences correlated with functional criteria of increased macrophage differentiation. As shown in representative histograms of Fig. 5C, only clones expressing MafB K32,297R but not clones expressing wild-type MafB or control clones showed significant phagocytic activity. This observation was confirmed in a quantification of the mean phagocytic activity and the percentage of phagocytic cells for three independent clones of each genotype (Fig. 5D). Western blotting did not reveal increased MafB protein expression in MafB K32,297R-expressing clones (data not shown). Together these results indicated that the absence of SUMO modification enabled MafB to overcome a v-Myb-induced differentiation block and to induce macrophage differentiation in myeloid progenitor cells.
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| DISCUSSION |
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Lysine residues of proteins can be subject to multiple posttranslational modifications (15). However, several lines of evidence indicate that the observations reported in this study are based on SUMO modification of MafB. Besides a perfect match of the target lysines to the SUMO modification consensus sequence, the effects of their mutation were fully reproduced by interfering in other ways with SUMO modification, such as SUMO removal by SUMO-specific proteases or by inhibiting SUMO conjugation using dominant-negative and siRNA inhibition of Ubc9, an essential enzyme of the SUMO modification pathway. Furthermore, these experimental manipulations had no influence on the MafB K32,297R SUMO target site mutant, indicating that it faithfully reflected the full activity of non-SUMOylated MafB. In addition, reimposing a SUMO-modified state on the K32,297R mutant protein by covalent fusion of SUMO-1 reestablished sensitivity to v-Myb-induced macrophage dedifferentiation.
SUMO modification has been shown to affect transcription factors, histones, polycomb group genes, and other nuclear proteins that influence transcription (15, 17, 18, 21, 41, 47, 49). Although SUMO modification can affect DNA binding (21), protein stability, and nuclear localization (19), in the majority of the cases, it appears to repress transcriptional activity (18, 21, 47). The detailed mechanisms of repression by SUMOylation have yet to be determined, but it has been proposed to involve changes in subnuclear localization (15, 21) or recruitment of histone deacetylases (15, 18, 21) and other corepressors (9, 31). Our new results indicate that beyond global transcriptional repression, SUMO modification may selectively regulate transcription factor cross inhibition.
Reciprocally inhibitory interactions between two different lineage-specific transcription factors have been invoked to maintain a balance between alternative differentiation programs (8, 22, 30). The work presented here and other studies (39) indicate that transcription factor cross inhibition may also be important for the homeostatic control between progenitor proliferation and differentiation into postmitotic mature cells. Regulatory mechanisms, however, that shift the equilibrium towards one or the other direction have not been identified. Our observations on the Myb/MafB antagonism in macrophage differentiation provide support for the hypothesis that SUMOylation may be such a mechanism.
As mentioned above, v-Myb inhibits macrophage differentiation and promotes extended self renewal of myeloid progenitors (3, 23), whereas MafB enhances differentiation and inhibits their proliferation (2, 29, 43). Our results suggest that this functional antagonism between Myb and MafB activities may depend on a direct inhibitory interaction between v-Myb and MafB. We observed that while v-Myb could repress MafB transactivation, MafB could not inhibit v-Myb activity. This observation could provide a molecular explanation for the ability of v-Myb to arrest myeloid progenitors in a proliferative state and the incapacity of MafB to drive macrophage differentiation in the presence of active v-Myb (shown schematically in Fig. 9A, top row). We could further show that in the absence of SUMO modification, MafB could resist v-Myb repression and overcome the v-Myb-imposed differentiation block, thus reestablishing an equilibrium between myeloid progenitor proliferation and macrophage differentiation (shown schematically in Fig. 9A, bottom row). While it is clear that SUMO modification of MafB is required for the ability of v-Myb to repress MafB-dependent transcription, this is not simply a consequence of SUMO modification facilitating binding of v-Myb, as unmodified MafB still interacts strongly with v-Myb (Fig. 6A). In summary, the observation that repression of MafB by v-Myb is strictly dependent on MafB SUMO modification indicates that SUMOylation may provide a mechanism to regulate transcription factor antagonism in the control of progenitor proliferation and differentiation.
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In summary, our results show that SUMO modification of a lineage-specific transcription factor can control the dynamic equilibrium of progenitor expansion and differentiation and establish SUMO modification as a mechanism to regulate tissue homeostasis in the hematopoietic system. It will be interesting to determine whether SUMO modification more generally regulates the activity of antagonistic transcription factor pairs in homeostasis and lineage choice.
| ACKNOWLEDGMENTS |
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We thank K.-H. Klempnauer for providing HD11v-MybER cells.
| FOOTNOTES |
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Published ahead of print on 4 June 2007. ![]()
Present address: Institut für Humangenetik, Charité Campus Virchow Klinikum, Forum 4 Augustenburger Platz 1, 13353 Berlin, Germany. ![]()
These authors contributed equally to this work. ![]()
¶ Present address: Friedrich Miescher Institute for Biomedical Research, Maulbeerstrasse 66, CH-4058 Basel, Switzerland. ![]()
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