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Molecular and Cellular Biology, November 2007, p. 7623-7630, Vol. 27, No. 21
0270-7306/07/$08.00+0 doi:10.1128/MCB.01481-07
Copyright © 2007, American Society for Microbiology. All Rights Reserved.

Department of Molecular Cell Biology, Medical Research Institute and School of Biomedical Science, Tokyo Medical and Dental University, and SORST, JST, Chiyoda-ku, Tokyo 101-0062, Japan,1 Medical Top Track Program, Medical Research Institute, Tokyo Medical and Dental University, Chiyoda, Tokyo 101-0062, Japan,2 National Institutes of Advanced Industrial Science and Technology, Biological Information Research Center (JBIRC), Kohtoh-ku, Tokyo 135-0064, Japan,3 Center of Excellence Program for Research on Molecular Destruction and Reconstruction of Tooth and Bone, Tokyo Medical and Dental University, Chiyoda, Tokyo 101-0062, Japan4
Received 16 August 2007/ Accepted 21 August 2007
| ABSTRACT |
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| INTRODUCTION |
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Nemo-like kinase (NLK) is an evolutionarily conserved serine-threonine protein kinase that was originally isolated as a murine orthologue of the Drosophila melanogaster Nemo, which plays a role in diverse signaling processes (2). Studies of Nemo null mutants of Drosophila revealed that Nemo plays a role in head development and the epithelial planar cell polarity pathway during eye development by controlling programmed cell death (25). In our previous studies, we demonstrated that NLK is involved in the suppression of Wnt/ß-catenin signaling pathways. NLK inactivates a transcriptional unit composed of ß-catenin-T-cell factor/lymphoid enhancer factor (TCF/LEF) by phosphorylating TCF/LEF, and this inactivation results in the inhibition of its binding to target gene sequences (15, 40). NLK functions downstream of transforming growth factor ß-activated kinase 1, a member of the mitogen-activated protein kinase (MAPK) kinase kinase family (15, 29); Wnt1 (14); and Wnt5a (16). The loss of NLK/Nemo function results in a lethal phenotype in Drosophila (25), Caenorhabditis elegans (33), and mouse (19) embryos, strongly implicating NLK/Nemo as a very important regulator of cell growth, patterning, and death. We previously demonstrated that in Xenopus embryos, the expression of NLK is restricted to the central nervous system, eye field, and anterior neural crest cell populations. Xenopus NLK (xNLK) induces the expression of anterior neural marker genes, such as those for Otx2 and the neural cell adhesion molecule (N-CAM), and associates with the high-mobility group domain transcription factor xSox11 (13). Our recent data indicate that, in addition to TCF/LEF and xSox11, NLK associates with and modulates the activities of other transcription factors, including STAT3 (29) and HMG2L1 (39). This finding suggests that NLK contributes to various signaling pathways via its ability to interact with a diverse collection of transcription factors.
Myocyte enhancer factor 2 (MEF2) proteins are members of the MADS (MCMI, agamous, deficiens, and serum response factor) box family of transcription factors. MEF2, originally identified as a transcription factor present at high levels in muscle tissue, binds to an A/T-rich DNA sequence in the control regions of numerous muscle-specific genes and, in particular, cooperates with members of the MyoD family in specifying the differentiation of skeletal muscle (1, 3, 38). Emerging evidence has shown that MEF2 proteins constitute a family of transcription factors that play critical roles in the processes of cell differentiation during the development of multicellular organisms (24). Mammalian MEF2 proteins are encoded by four genes (those for MEF2A, MEF2B, MEF2C, and MEF2D), which exhibit isoform-specific or overlapping patterns of expression in both embryonic and adult tissues. Structurally, the MEF2 proteins comprise highly homologous amino termini that mediate MEF2 homo- and heterodimerization and DNA binding, while the carboxyl termini are more divergent and contain the transactivation domain (1). All MEF2 family members are expressed at high levels in neurons in the central nervous system. The expression of all MEF2s increases in differentiating neurons during brain development (22). Although recent in vitro findings support the hypothesis that MEF2 family members regulate neuronal survival and development, little is known about the exact functions of MEF2s during early neuronal development in embryos.
MEF2 family molecules are the targets for several key intracellular signaling pathways. In this regard, the involvement of p38 MAPK (41), extracellular signal-regulated kinase 5 (ERK5) (17), cyclin-dependent kinase 5 (CDK5) (9), and protein kinase A (36) in these processes has been well known. However, the dynamic changes in MEF2 phosphorylation during diverse cellular processes such as neuronal survival and apoptosis strongly suggest that the regulation of MEF2 is more complex, raising the possibility of the involvement of yet-unidentified kinases and phosphatases (7, 10, 23, 30, 35).
In the present study, we first identified the MEF2A transcription factor as a novel partner for NLK. xNLK directly phosphorylated Xenopus MEF2A (xMEF2A) at Thr297 and Ser340, and the endogenous phosphorylation of MEF2A was inhibited by the depletion of endogenous NLK. The depletion of either xNLK or xMEF2A resulted in a defect in anterior neural development, including the loss of eye and head structures in Xenopus embryos. The phenotypes induced by endogenous xMEF2A depletion were reversed by the overexpression of wild-type xMEF2A but not by that of mutant xMEF2A harboring mutations in the NLK phosphorylation sites. These results reveal a new mechanism for regulating anterior formation by NLK-MEF2A signaling that involves the phosphorylation of MEF2A.
| MATERIALS AND METHODS |
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Embryo handling and MO. Capped mRNAs were synthesized from linearized vectors using the mMessage machine kit (Ambion). mRNAs were then injected into the animal blastomeres of embryos. Animal cap explants were removed at the late blastula stage and allowed to grow until control sibling embryos reached the neurula stage. The morpholino oligonucleotides (MO; Gene Tools, LLC) used here were 5'-GCCCTTCCCTACACGGATGTCCCCC-3' (xNLK MO) (28), 5'-CATGGTTGCGTTGTTCTCTCCC-3' (xMEF2A MO), 5'-CCATAGTCCCCGTTTTTCTGTCTTC-3' (xMEF2C MO), and 5'-AATCTGGATCTTTTTTCTGCCCATG-3' (xMEF2D MO). MO for xMEF2A, xMEF2C, or xMEF2D specifically inhibited the translation of mRNA for xMEF2A, xMEF2C, or xMEF2D, respectively.
RT-PCR analysis. Total RNA was prepared using TRIzol (Invitrogen). cDNA synthesis was carried out using Moloney murine leukemia virus reverse transcriptase (Invitrogen). The sequences of the primer pairs were as described previously (13) and as follows: Pax6, 5'-CAGAACATCTTTTACCCAGGA-3' and 5'-ACTACTGCTAATGGGAATGTG-3'; Lhx2, 5'-GTCTTCAGCTTGCCCCCTCTCCTTCT-3' and 5'-GGTCGGGTTCCTGTGTTGCTTCTT-3'; Rx1, 5'-CCCCAACAGGAGCATTTAGAAGAC-3' and 5'-AGGGCACTCATGGCAGAAGGTT-3'; and Six3, 5'-ATGGTGTTCAGGTCCCCTCT-3' and 5'-GGATGGACTCGTGTTTATTAATGG-3'.
Antibodies. The following antibodies were used for immunoprecipitation and/or Western blotting analysis: anti-FLAG (M2; Sigma), anti-Myc (9B11; Cell Signaling), anti-MEF2A (Santa Cruz) and phospho-Thr312 anti-MEF2A (Signal Antibody Technology), and anti-NLK (16).
Immunoprecipitation and Western blotting analysis. 293 cells were cultured at 37°C in Dulbecco's modified Eagle's medium (DMEM) supplemented with 10% fetal bovine serum. 293 cells were transfected with the plasmids indicated below by the calcium phosphate precipitation method. After 24 h, cells were lysed in lysis buffer (50 mM Tris-HCl, pH 7.5, 150 mM NaCl, 1 mM EDTA, 0.5% NP-40, 10 mM NaF, 1 mM Na3VO4, 1 mM phenylmethylsulfonyl fluoride, 10 µg of aprotinin/ml, 10 µg of pepstatin/ml, and 20 µg of leupeptin/ml). Lysates were precleared with protein G-Sepharose beads (Amersham Biosciences) and immunoprecipitated with the appropriate antibodies. For Western blotting analysis, whole-cell lysates or immunoprecipitates were resolved by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred onto polyvinylidene difluoride membranes (Amersham Biosciences). The membranes were probed with the appropriate antibody, and proteins of interest were visualized with horseradish peroxidase-conjugated mouse or rabbit immunoglobulin G by using Western Lightning chemiluminescence reagent Plus (PerkinElmer Life Science).
Protein identification by LC-MS-MS analysis. FLAG-NLK was expressed in 293 cells, and NLK and associated proteins were recovered from cell extracts by immunoprecipitation with anti-FLAG antibody. The NLK-associated complexes were digested with Achromobacter protease I, and the resulting peptides were analyzed using a nanoscale liquid chromatography-tandem mass spectrometry (LC-MS-MS) system as described previously (26).
In vitro kinase assay.
293 cells were transfected with the FLAG-NLK expression plasmid. The lysates were prepared from the transfected cells by using lysis buffer and immunoprecipitated with anti-FLAG antibody. Immunoprecipitates were incubated with 1 µg of bacterially expressed glutathione S-transferase fusion proteins corresponding to amino acids 217 to 470 of xMEF2A in 20 µl of kinase buffer containing 10 mM HEPES (pH 7.4), 1 mM dithiothreitol, 5 mM MgCl2, and 5 µCi of [
-32P]ATP at 25°C for 5 min. Phosphorylated substrates were subjected to SDS-PAGE and quantitated using a BAS 2500 image analyzer (Fujifilm).
RNA interference. Neuro2A cells were grown in 12% fetal bovine serum-DMEM with 4.5 g of glucose/liter and 25 mM HEPES (pH 7.4). For differentiation experiments, Neuro2A cells were subjected to serum depletion by replacing the medium with fresh serum-free DMEM and further incubated for the periods indicated below (6). We designed small interfering RNAs (siRNAs) targeting mouse NLK mRNA (sense, 5'-CAGATCCAAGAGATGGAAA-3') along with the corresponding antisense RNA oligonucleotide with two thymidine residues (dT-dT) at the 3' end of the sequence (Dharmacon). The control siRNA siCONTROL nontargeting siRNA no. 2 (Dharmacon) was used for the negative control. Neuro2A cells were transfected with these siRNAs by using Lipofectamine 2000 according to the instructions of the manufacturer (Invitrogen). Thirty-six hours posttransfection, the medium was replaced with fresh serum-free DMEM to induce the differentiation of Neuro2A cells.
Whole-mount in situ hybridization. pBluescript vectors containing a fragment of xNLK cDNA encoding the C-terminal region (nucleotides 945 to 1509; GenBank accession no. AB071285) and the 3' untranslated region of xMEF2A cDNA (nucleotides 1799 to 2352; GenBank accession no. BC046368) were used as templates to generate digoxigenin-labeled RNA probes with a digoxigenin RNA labeling kit according to the protocol of the manufacturer (Roche). Whole-mount in situ hybridization analysis of embryos of various stages was performed with digoxigenin-labeled RNA probes essentially as described by Hemmati-Brivanlou et al. (11) with the following modifications. After the manual removal of the vitelline membranes, embryos were fixed in 4% paraformaldehyde in phosphate-buffered saline and dehydrated by gradual washing in methanol. Embryos were rehydrated with phosphate-buffered saline containing 0.1% Triton X-100 and then treated with proteinase K (2 µg/ml) for 10 min at ambient temperature, followed by postfixation with 4% paraformaldehyde for 20 min. Hybridization was performed at 68°C with a solution of 50% formamide, 5x SSC (1x SSC is 0.15 M NaCl plus 0.015 M sodium citrate), 2x Denhardt's solution, 200 µg of tRNA/ml, 0.1% Triton X-100, and 0.1% CHAPS {3-[(3-cholamidopropyl)-dimethylammonio]-1-propanesulfonate} containing 200 ng of digoxigenin-labeled RNA probe/ml. Color detection was carried out with BM purple (Roche).
| RESULTS |
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xNLK-xMEF2A signaling regulates anterior formation in Xenopus. To analyze the function of xNLK-xMEF2A signaling in embryonic development, we first confirmed the expression pattern of xMEF2A during Xenopus embryonic development by RT-PCR analysis. We found that xMEF2A was expressed from maternally deposited mRNA and that its zygotic expression was induced after the neurula stage (Fig. 4A). It is noteworthy that xMEF2A expression in the head region of Xenopus embryos was detected during neural stages and that it parallels the expression of xNLK (Fig. 4B and C). To address the physiological relationship between xNLK and xMEF2A in the anterior tissues, we synthesized an antisense MO targeting xMEF2A. By Western blotting analysis, we confirmed that the injection of the designed xMEF2A MO specifically reduced the expression of xMEF2A protein (data not shown). When xMEF2A MO was injected into a Xenopus region that develops mainly into neuroectodermal tissues and head structures, the phenotype caused by the depletion of xMEF2A was mainly similar to the phenotype resulting from the injection of NLK MO: incomplete formation of the eyes (Fig. 5A) and reduced expression of anterior markers such as Pax6, Lhx2, Rx, and Six3; cement gland marker XAG1; and panneural marker N-CAM (Fig. 5B). The anterior defects induced by xMEF2A MO were abolished by the coinjection of wild-type xMEF2A mRNA but not by the coinjection of mRNA of the nonphosphorylatable mutant protein [xMEF2A(T297A, S340A)] (Fig. 5A and C). These results suggest that MEF2A is involved in anterior formation and that the phosphorylation of xMEF2A at Thr297 and Ser340 is indispensable for normal anterior development in Xenopus.
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| DISCUSSION |
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It is well known that the phosphorylation of MEF2 is critical for its tissue-specific functions. In this regard, p38 MAPK is the best-characterized kinase acting on MEF2 (4, 41); however, other kinases, such as ERK5 (17), CDK5 (9), and protein kinase A (36), have also been proposed to phosphorylate MEF2. Increasing evidence indicates that the MEF2 phosphorylation state plays a critical role at the branch point that determines neuronal survival versus apoptosis. For example, the phosphorylation of MEF2 by p38 MAPK activates the transcriptional activity of MEF2, thereby promoting neuronal survival (30). On the other hand, neurotoxic stress or the depletion of neuronal activity leads to the direct cleavage of MEF2A, MEF2C, and MEF2D by activated caspases, and the resulting MEF2 cleavage fragment induces neuronal apoptosis by dominantly interfering with the transcriptional activity of intact MEF2 (35). During neuronal apoptosis, the inactivation of MEF2 is associated with the hyperphosphorylation of MEF2 mediated by CDK5 (35). Here, we have found that NLK plays a novel role in regulating the activity of MEF2 via direct phosphorylation during early development in Xenopus embryos. The phosphorylation of the MEF2A residues Thr312, Thr319, and Ser355 (Thr297, Thr304, and Ser340 in Xenopus) by p38 MAPK (41) and/or ERK5 (17) is known to be important for MEF2A transcriptional activity, whereas the phosphorylation of Ser255 and Ser408 by CDK5 leads to the degradation of MEF2A (9, 35). Our findings demonstrate that xNLK phosphorylates Thr297 and Ser340, which are residues in xMEF2A critical for its activation (Fig. 3). The observed eye defects induced by the depletion of endogenous xMEF2A could be abolished by coinjection with wild-type xMEF2A mRNA but not with mRNA of the nonphosphorylatable mutant MEF2A(T297A, S340A). Moreover, the endogenous phosphorylation of MEF2A was inhibited by the depletion of endogenous NLK in neuronal cells (Fig. 3D). These findings provide the first evidence that xNLK regulates anterior development via the phosphorylation of xMEF2A. By contrast, xNLK did not phosphorylate Thr304 of xMEF2A, which is a potential target of p38
and ERK5. Of note, Nishimoto et al. recently reported that the depletion of MEK5 or ERK5 in Xenopus embryos resulted in defects in anterior head structures, including the loss of the eyes (28), apparently similar to the phenotypes we observed following the depletion of xNLK or xMEF2A. Therefore, it will be necessary to examine whether xNLK and Xenopus ERK5 may cooperatively regulate anterior development via the activation of xMEF2A.
Since we injected xNLK MO or xMEF2A MO into the animal regions of eight-cell-stage embryos, we cannot rule out the possible interference of xNLK or xMEF2A depletion with the activity of the Spemann organizer and anterior endomesoderm. These are two regions involved in the patterning of the dorsoanterior axis that could affect the formation of the anterior head structure. However, in the whole embryos and Chordin-injected ectodermal explants, we observed that the depletion of endogenous xNLK or xMEF2A reduced the expression of the specific anterior marker genes (those for Xenopus Pax6, Lhx2, Rx1, and Six3) and the panneural marker N-CAM (Fig. 5B and 6B, C, and D). In addition, embryos depleted of xMEF2A exhibited no apparent effects on the expression of mesodermal markers such as Brachyury (Xbra) or
-actin (data not shown). Moreover, endogenous NLK is required for the phosphorylation of MEF2A in both cultured cells and Xenopus embryos (Fig. 3D). The NLK- or Chordin-induced anterior markers were inhibited by the injection of xMEF2A MO and restored by coinjection with wild-type xMEF2A mRNA but not with mRNA of the nonphosphorylatable mutant protein (Fig. 6A and C). Furthermore, coinjection with xNLK mRNA could not reverse the inhibition of Chordin-induced anterior markers by the depletion of xMEF2A (Fig. 6C). Taken together, these results suggest that MEF2A mediates in part the effect of NLK on anterotissue development. On the other hand, the inhibition of Xenopus Pax6 and Lhx2 expression could be rescued by the wild-type xMEF2A but not by the nonphosphorylated mutant protein in the Chordin-injected animal caps (Fig. 6B) in which the endogenous NLK was depleted. This may be due to the existence of other potential MEF2A activators, such as p38
(41) and ERK5 (17, 28), that could compensate for NLK activity. In contrast, the overexpression of wild-type xMEF2A failed to induce the expression of Xenopus Rx1, Six3, and N-CAM genes (Fig. 6), suggesting that the endogenous expression of Xenopus Rx1, Six3, and N-CAM genes is absolutely dependent on the presence of NLK but not other kinases.
In Xenopus, three isoforms of the MEF2 family have been identified: xMEF2A, xMEF2C, and xMEF2D. Studies of mammalian MEF2 molecules suggest that different isoforms may overlap in their biological functions (1, 10, 24). Therefore, we examined whether other isoforms of xMEF2, xMEF2C and xMEF2D, may also be involved in xNLK-xMEF2A-mediated anterior formation. We found that neither the depletion of xMEF2C nor that of xMEF2D affected the expression of any anterior marker genes, whereas the depletion of endogenous xMEF2A blocked the induction of these markers (Fig. 5B and 6D). Thus, xMEF2A appears to be selectively responsible for regulating certain anterior marker genes downstream of xNLK. Other studies have also demonstrated possible functional specificity among different isoforms of the MEF2 family (20, 21, 27). For example, MEF2A and MEF2D, but not MEF2C or MEF2B, function as prosurvival factors with high levels of transcriptional activity in postmitotic cerebellar granule neurons (20). Studies of MEF2A and MEF2C null mice have indicated that MEF2C plays an essential role in cardiomyogenesis in early development (prior to looping morphogenesis) and that MEF2A fulfills specific roles in maintaining appropriate mitochondrial content and cytoarchitectural integrity in the postnatal heart (21, 27). However, studies of these null mice have reported no apparent defects in early neural development, and this may be due to the isoform complexity (31, 34) and possible redundancy of function in the mouse. Thus, our studies of Xenopus may provide the first clues to isoform-specific functions of MEF2 family members during embryogenesis.
To date, two regulatory pathways for head development have been proposed. One is a default state that is triggered by inhibiting growth factor signals required for trunk development, such as those induced by Wnt, BMP, and Nodal (5, 8, 18). The other is an insulin-like growth factor-mediated active pathway involved in anterior head formation (12, 32). These pathways function in a parallel and/or cooperative manner to promote anteriorizing activity and to suppress the trunk mesoderm. Although the actual ligands that initiate NLK-MEF2A signaling are unclear at present, it is known that NLK is activated by many ligands and stimuli and is involved in mesoderm induction and axis formation through Wnt and transforming growth factor ß signaling pathways in early Xenopus development. It is possible that NLK activates MEF2A through the action of a yet-to-be-identified ligand(s) that regulates anterior tissue development, and further studies will be needed to identify the precise ligand(s) involved in this process. It will also be important to determine whether there is cross talk among NLK-MEF2A and other signaling pathways to mediate anterior tissue development.
| ACKNOWLEDGMENTS |
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This work was supported by grants-in-aid for scientific research from the Ministry of Education, Science, Sports and Culture of Japan.
| FOOTNOTES |
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Published ahead of print on 4 September 2007. ![]()
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