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Molecular and Cellular Biology, December 2007, p. 8271-8283, Vol. 27, No. 23
0270-7306/07/$08.00+0 doi:10.1128/MCB.01781-06
Copyright © 2007, American Society for Microbiology. All Rights Reserved.

Laboratory of Cellular and Molecular Biology, Center for Cancer Research, National Cancer Institute,1 Mammalian Development Section, National Institute of Neurological Disorders and Stroke,2 Food and Drug Administration,3 National Institute of Dental and Craniofacial Research, National Institutes of Health, Bethesda, Maryland,4 Georgetown University, Washington, DC5
Received 20 September 2006/ Returned for modification 13 November 2006/ Accepted 14 September 2007
| ABSTRACT |
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| INTRODUCTION |
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ASAP1 is a phosphatidylinositol 4,5-bisphosphate-dependent Arf GAP (34) specific for class 1 and 2 Arfs (3, 10, 21, 22). ASAP1 contains, from the N to C termini, BAR (Bin, amphiphysin, and RVS161/167), pleckstrin homology, Arf GAP, ankyrin repeat, proline-rich, and Src homology 3 (SH3) domains. Two predominant splice variants, ASAP1a and ASAP1b, differ by 57 amino acids within the proline-rich region (3). ASAP1 binds a number of proteins that regulate focal adhesions (FAs) and invadopodia. ASAP1 was initially identified on the basis of GAP activity and in screens for proteins that bind to the SH3 domain of Src (3, 16), an oncogene that is a nonreceptor tyrosine kinase and induces the formation of invadopodia and podosomes (5). ASAP1 has also been found to bind to and be phosphorylated by Pyk2, a FA kinase (FAK)-type protein. FAK is a nonreceptor tyrosine kinase that mediates signaling from FAs and controls the turnover of the same structures (30, 31, 35). Additional proteins reported to bind ASAP1 include CrkL, CD2AP, CIN85, and cortactin (17, 21, 22, 28, 29).
The first reported evidence for a role for ASAP1 in cytoskeletal regulation was the finding that it associates with FAs (33). This localization is dependent on binding to CrkL (28) and FAK (21). Either overexpression or reduced expression of ASAP1 decreases the levels of paxillin in FAs (21, 33). This effect is dependent on Arf GAP activity (21) and on ASAP1 interaction with FAK (21) and CD2AP (22). ASAP1a has also been implicated in the formation of invadopodia. ASAP1a, but not ASAP1b, was found to bind to cortactin, a protein found in invadopodia but not FAs (5, 29). Either reducing ASAP1a levels with small interfering RNA (siRNA) or blocking the complex of ASAP1 with cortactin abrogates the formation of invadopodia and cell invasion (29). The gene for ASAP1 is located on chromosome 8q in a region that is amplified in a number of malignancies (7). In uveal melanoma and mammary carcinoma, ASAP1 expression levels have been found to correlate with invasive potential, consistent with ASAP1-dependent regulation of cell adhesive structures (7, 29).
Here we have determined the structural requirements for the ASAP1-dependent formation of invadopodia and podosomes. Contrary to expectations based on previous work (12, 29), both major ASAP1 isoforms bound cortactin, associated with invadopodia and podosomes, and supported podosome formation. Neither direct interaction with Src nor GAP activity was necessary for ASAP1 to support podosome formation. The BAR and SH3 domains of ASAP1 were necessary for podosome formation. Src-dependent phosphorylation of ASAP1 was also necessary. Based on these results, we conclude that protein association with the SH3 domain of ASAP1 together with ASAP1 phosphorylation leads to the formation of podosomes. We speculate that the function of the BAR domain is related to the tubulation of membranes within podosomes.
| MATERIALS AND METHODS |
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BAR]ASAP1b has previously been described (27). A reading frame for Flag-[1-1022]ASAP1b, which consists of amino acids 1 to 1022 of ASAP1b ([
SH3]ASAP1b), was generated by PCR and subcloned into pCI. Point mutations in ASAP1b cDNA (R497K, R811A, Y782E, and Y782F) and in ASAP1a cDNA (Y1094A, E1103A, and W1122A) were generated by site-directed mutagenesis using sequence-specific oligonucleotides and the QuikChange mutagenesis kit (Stratagene, La Jolla, CA). The open reading frame for ASAP1b (GenBank accession no. AF075462) was cloned into pEGFPC1 using the EcoRI site. Mammalian expression vectors of constitutively active chicken Src (c-Src) (pCEFL-[Y527F]c-Src), dominant negative c-Src (pCEFL-[R295M,Y527F]c-Src), and focal adhesion kinase (FAK) were kind gifts from J. Silvio Gutkind (OPCB, NIDCR, National Institutes of Health, Bethesda, MD). A mammalian expression vector for dominant negative FAK (FRNK) (13) was a kind gift from J. Thomas Parsons (University of Virginia at Charlottesville). An expression vector for the expression of green fluorescent protein (GFP)-cortactin was a kind gift from Takehito Uruno, Laboratory of Cell Biology, NHLBI. Cell lines and transfections. NIH 3T3 fibroblasts and NIH 3T3 fibroblasts stably transfected with a plasmid directing expression of a fusion protein of red fluorescent protein (RFP) and actin were grown in Dulbecco's modified Eagle medium (DMEM) supplemented with 2 mM L-glutamine and 10% (vol/vol) heat-inactivated fetal bovine serum (FBS). MDA-MB-231 breast cancer cells stably expressing [Y527F]c-Src ([Y527F]c-Src-MDA-MB-231) were maintained in phenol red-free DMEM supplemented with 10% (vol/vol) heat-inactivated FBS, 2 mM L-glutamine, and 100 units/ml penicillin-100 µg/ml streptomycin. NIH 3T3 fibroblasts were seeded at 5 x 104 cells/cm2 overnight either in tissue culture dishes or in 12-well tissue culture plates containing fibronectin-coated (25 µg·ml–1) (Sigma, St. Louis, MO) coverslips. Cells were transfected for 18 to 24 h using FuGENE 6 per the manufacturer's instructions (Roche Diagnostics Corp., Indianapolis, IN). For cotransfections, equal amounts of each plasmid DNA were used. 293T cells were handled similarly, but Lipofectamine 2000 (Invitrogen) was used for transfections.
Antibodies. Rabbit polyclonal anti-ASAP1 serum (antibody 642) has previously been described (33). Mouse anti-c-Src immunoglobulin G (IgG) (monoclonal antibody 327) used for immunofluorescence was a kind gift of Joan Brugge (Department of Cell Biology, Harvard Medical School, Boston, MA). Monoclonal anti-c-Src antibody (clone EC10) from Upstate Biotech (Lake Placid, NY) was used for immunoblotting. Polyclonal and monoclonal (clone M5) antibodies recognizing the Flag epitope were from Sigma. Rabbit anti-actin IgG was from Molecular Probes (Eugene, OR). A rabbit polyclonal antibody for GFP was from Invitrogen, and a monoclonal antibody was from Covance. Antibodies against cortactin (clone 4F11), FAK (clone 2A7), phosphotyrosine (clone 4G10), and the myc epitope were from Upstate Biotech (Lake Placid, NY). An antibody for paxillin was from BD Transduction Laboratories (San Diego, CA). Rockland Antibody Company (Gilbertsville, PA) raised antisera against the phosphopeptide acetyl-KQRLS[pY]GAFTN-Ahx-C-amide for the detection of ASAP1 phosphorylated on Tyr-782. The antibody, named pAB7425, was affinity purified and used for immunoblotting. The antibody did not detect protein in NIH 3T3 fibroblasts or MDA-MB-231 cells without active Src. In cells expressing [Y527F]c-Src, the antibody detected a protein migrating with an Mr of 125,000 by immunoblotting (Fig. 1). The signal was blocked by the peptide to which the antibody was raised.
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Live-cell imaging. NIH 3T3 cells stably transfected with RFP-actin were transiently transfected with enhanced GFP (eGFP)-ASAP1b and [Y527F]c-Src. After 24 h, 4 x 105 cells were seeded on chambered glass slides coated with fibronectin. The movements of fluorescent proteins in live cells were observed with a Zeiss Axiovert 200 microscope equipped with a PerkinElmer Ultraview spinning disc confocal system (PerkinElmer, Boston MA), using a 63x 1.4 NA Plan-Neofluar oil immersion objective. Images were captured with an Orca-ERII charge-coupled-device camera (Hamamatsu, Bridgewater, NJ). Photobleaching studies were performed using the PhotoKinesis attachment, using both the 488- and 568-nm laser lines for bleaching.
Movies were produced from a series of TIFF images of single confocal sections using IPLab3.6 (Scanalytics, Inc., Fairfax, VA).
Protein extraction, immunoprecipitation, and immunoblotting. Proteins were extracted in 20 mM Tris-Cl (pH 8.0), 100 mM NaCl, 10% glycerol as described previously (26). Protease activity was inhibited using Roche Complete mini protease inhibitor cocktail tablets (Roche, Mannheim, Germany). For experiments examining phosphotyrosine levels, 1 mM Na3VO4 was included in the extraction buffer. Ectopically expressed protein levels and actin protein levels were determined by immunoblotting whole-cell lysates. For immunoprecipitation, cell lysates were incubated overnight with 15 µl of anti-Flag M2-agarose affinity gel (Sigma). Samples were centrifuged and rinsed three times with lysis buffer. Bound proteins were eluted with 30 µl of sodium dodecyl sulfate-polyacrylamide gel electrophoresis sample buffer. Eluted proteins were separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and transferred to nitrocellulose. Horseradish peroxidase-conjugated secondary antibodies were detected with the ECL Plus Western blotting detection system (Amersham Biosciences, Piscataway, NJ).
Gelatin matrix degradation assay. Gelatin Oregon Green-Alexa 488 conjugate was purchased from Molecular Probes and resuspended according to the manufacturer's instructions. Poly-D-lysine, sodium borohydride (NaBH4), and porcine type A gelatin were from Sigma; glutaraldehyde was purchased from Ted Pella, Inc. (Redding, CA). Gelatin-coated coverslips were prepared as described previously (2) with the following modifications. Coverslips were first incubated at room temperature for 20 min in 50 mg/ml poly-D-lysine and then rinsed with phosphate-buffered saline (PBS). Coverslips were then treated with 0.5% (vol/vol) glutaraldehyde in PBS for 15 min and washed with PBS. Gelatin Oregon Green-Alexa 488 was diluted 1:30 in 0.2% (wt/vol) unlabeled gelatin and preheated to 37°C prior to incubation on coverslips; coverslips were rinsed and then used. NIH 3T3 fibroblasts were seeded in 10% FBS-DMEM and incubated for 18 to 24 h on gelatin-coated coverslips prior to fixation and staining. [Y527F]c-Src-MDA-MB-231 breast cancer cells were analyzed following a 5-h incubation on gelatin coverslips. Cells were counted as having a degraded matrix when black regions, indicative of the loss of fluorescently labeled gelatin, were observed beneath the cell.
ASAP1 siRNA. SMARTpool siRNA from Dharmacon was used to target ASAP1 in NIH 3T3 fibroblasts (GenBank accession no. NM_010026) and MDA-MB-231 cells (GenBank accession no. NM_018482). HiPerfect transfection reagent from Qiagen was used for this purpose. For siRNA rescue experiments, custom-made ASAP1 siRNA against the 3' untranscribed region (UTR) was designed by Dharmacon and was electroporated using an Amaxa kit and instrument (Amaxa, Gaithersburg, MD) according to the manufacturer's protocol. GCAUGCAUCUAGACGCUUAUU was the sense sequence and phospho-UAAGCGUCUAGAUGCAUGCUU was the antisense sequence used. Cells were used 72 h posttransfection. A siCONTROL nontargeting siRNA pool (product no. D-001206-13-05; Dharmacon) was used as a control in some experiments. It had no effect on podosomes (not shown).
| RESULTS |
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BAR]ASAP1b (Flag-[331-1091]ASAP1b). [
BAR]ASAP1b had no detectable effect on the formation of podosomes when endogenous ASAP1 was present (Fig. 7A and B and Table 1). To confirm that podosomes were formed, cells were triple stained to examine ASAP1 and actin together with cortactin, phosphotyrosine, or vinculin as additional markers of podosomes. The structures contained all markers that were examined. We concluded that the structures were either podosomes or podosome-like and that [
BAR]ASAP1 did not affect podosome formation when endogenous ASAP1 was present. However, cells in which endogenous ASAP1 was replaced with [
BAR]ASAP1b formed few podosomes when expressing [Y527F]c-Src (Fig. 7 and Table 1), leading us to further conclude that the BAR domain was important for this function of ASAP1.
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SH3]ASAP1b (Flag-[1-1022]ASAP1b) or Flag-tagged wild-type ASAP1b were coexpressed with [Y527F]c-Src in NIH 3T3 fibroblasts. The cells were lysed, and proteins were immunoprecipitated from the lysates with an antibody to the Flag epitope. Similar levels of Flag-[
SH3]ASAP1b and Flag-ASAP1b were detected in the precipitates (Fig. 8B). As previously observed, precipitates with Flag-ASAP1b contained cortactin. In contrast, cortactin was not detected in precipitates with Flag-[
SH3]ASAP1b (Fig. 8B). These results are consistent with cortactin binding being dependent on the SH3 domain. The SH3 domain of ASAP1 also binds to FAK (21). We tested for competitive binding of FAK and cortactin to the SH3 domain. Flag-tagged ASAP1b, hemagglutinin (HA)-tagged FAK, and GFP-tagged cortactin were expressed in combination as indicated in Fig. 8C. We immunoprecipitated cortactin through the GFP tag and examined precipitates for Flag-tagged ASAP1b (Fig. 8C, left). We found no detectable ASAP1b signal if cortactin was not expressed. More ASAP1b was detected in precipitates from cells expressing HA-FAK than in those that did not. We also immunoprecipitated through the Flag tag and examined the precipitates for the presence of GFP-cortactin. More cortactin was detected with the expression of HA-FAK than in the cells not expressing HA-FAK. Furthermore, in both experiments, FAK was found in the precipitates with ASAP1 and cortactin. Based on these combined results, we concluded that FAK and cortactin binding to ASAP1 are codependent.
Several amino acids within the SH3 domain of ASAP1 align with highly conserved residues in other SH3 domains that mediate binding to PXXP motifs (1, 19, 20). To further characterize the role of the SH3 domain in cortactin binding and the relationship to FAK binding, we mutated three residues in ASAP1a—Tyr-1094, Glu-1103, and Trp-1122—to Ala. Using immunoprecipitation, we determined the binding levels of the mutant proteins to cortactin and FAK (Fig. 8D and E). The three mutants were able to bind to cortactin, but [W1122A] ASAP1a and [E1103A]ASAP1a did not bind cortactin as efficiently as wild-type ASAP1b or [Y1094A]ASAP1a (Fig. 8D). [Y1094A]ASAP1a bound effectively to FAK, whereas both [W1122A]ASAP1a and [E1103A]ASAP1a did not bind FAK. Thus, although FAK enhances the cortactin-ASAP1 association, cortactin can bind ASAP1 without FAK.
The SH3 domain of ASAP1 is critical for the ability of ASAP1 to support podosome formation. As a first test of the function of the SH3 domain, the effects of expressing ASAP1 and [
SH3]ASAP1b in NIH 3T3 fibroblasts were compared. We found that [
SH3]ASAP1b disrupted podosome formation (Fig. 9 and Table 1). In cells with reduced levels of endogenous ASAP1, expression of [
SH3]ASAP1 together with [Y527F]c-Src did not induce the formation of podosomes. Instead, cortactin was present in amorphous structures in some cells (Fig. 9A, panel d). Cortactin and [
SH3]ASAP1 did not colocalize. Polymerized actin was present in the cell cortex; some puncta of actin were observed, but these were not on the ventral surface of the cell nor did they colocalize with ASAP1 (Fig. 9A, panels f and h). [
SH3]ASAP1 did not colocalize with phosphotyrosine (Fig. 9A, panels j and l) or vinculin (Fig. 9A, panels n and p), two other markers of podosomes. To further characterize the role of the SH3 domain, the effect of expressing [W1122A]ASAP1a, [Y1094A]ASAP1a, and [E1103A]ASAP1a on the formation of podosomes was determined (Fig. 9B and Table 1). Each blocked the formation of podosomes in the presence of endogenous ASAP1. The effects of [Y1094A]ASAP1a and [E1103A]ASAP1a were modest. [W1122A]ASAP1a blocked to the greatest extent. The podosomes or podosome-like structures that formed contained cortactin, actin, phosphotyrosine, and vinculin (Fig. 9C, D, and E). After depletion of endogenous ASAP1 with siRNA, [Y1094A]ASAP1a and [E1103A]ASAP1a supported podosomes or podosome-like structures (Fig. 9B) but less efficiently than did wild-type ASAP1a or ASAP1b (Table 1). [W1122A]ASAP1a poorly supported the formation of podosomes or podosome-like structures (Fig. 9B and Table 1).
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SH3]ASAP1, which does not bind FAK (Fig. 12A). As anticipated, expression of [Y527F]c-Src did not result in phosphorylation of [Y782F]ASAP1. Overexpression of FAK did not result in the phosphorylation of ASAP1b as previously described (18) (Fig. 12B). Furthermore, ASAP1b was as efficiently phosphorylated by [Y527F]c-Src in the presence of FRNK, a dominant-negative form of FAK, as in its absence (Fig. 12B). Based on these results, we conclude that Src induces phosphorylation of ASAP1 on Tyr-782 independent of the function of FAK. As a test of a possible regulatory relationship between phosphorylation and protein binding to the SH3 domain of ASAP1, cortactin binding levels to wild-type and [Y782F]ASAP1 were compared in cells expressing [Y527F]c-Src (Fig. 12C). Cortactin associated with both proteins.
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| DISCUSSION |
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Our work is the first examination of the role of phosphorylation of ASAP1 for cytoskeleton remodeling. Previous examination of Src- and Pyk2-dependent phosphorylation of ASAP1 focused on GAP activity (18). Both Src and Pyk2 were found to phosphorylate two Tyrs, one at position 308 (mouse sequence, accession no. AF 075462) and the other at 782. Phosphorylation of ASAP1 inhibited GAP activity. Tyr-308 is not present in the identified splice variants of the human protein so we did not examine the effect of mutating this residue. Tyr-782 and the surrounding 10 amino acids are identical in chimpanzee, chicken, dog, mouse, rat, cow, and human ASAP1 proteins. Consistent with the high degree of conservation of this sequence, Tyr-782 was critical to ASAP1 function. ASAP1 with Tyr-782 changed to phenylalanine functioned as a dominant negative, blocking podosome formation.
Though necessary for the formation of podosomes, phosphorylation of ASAP1 on Tyr-782 may not be sufficient for podosome formation. [Y782E]ASAP1 expression did not induce podosomes. In this mutant, a glutamate provides the negative charge at position 782, mimicking phosphotyrosine in the wild-type protein. Glutamate is not an ideal phosphomimetic. Nevertheless, it is possible that a second Src-dependent event may be necessary for podosome/invadopodium formation. Thus, ASAP1 may mediate one of several parallel events initiated by activated Src that lead to the formation of podosomes and invadopodia.
Src activity is necessary for ASAP1 phosphorylation, but the kinase that directly phosphorylates ASAP1 has not been identified. Both Src and Pyk2 have previously been implicated in ASAP1 phosphorylation (18). The Src binding site was not necessary for either Src-dependent podosome formation or phosphorylation of Tyr-782. We considered that Src might work through FAK or Pyk2; however, FRNK, a dominant negative form of FAK which should bind and thereby sequester the SH3 domain of ASAP1 from both FAK and Pyk2, had no effect on Src-dependent phosphorylation. Three explanations for the results are as follows: (i) Src bound the mutant with sufficient affinity so that, at high concentrations, it was able to directly phosphorylate ASAP1; (ii) Src or Pyk2 can phosphorylate without binding to a site distinct from the phosphorylation site; or (iii) another kinase in the Src cascade is responsible for directly phosphorylating ASAP1.
We found that the SH3 domain of ASAP1 was important for both podosome formation and cortactin binding. ASAP1 binding to cortactin has previously been reported to be important for invadopodium formation (12, 29). Our results differ from the previous reports in two ways. First, we found that ASAP1 associates with cortactin in cells that are not forming invasive structures in addition to those that do form invadopodia; previously ASAP1 was found to associate with cortactin only in invasive cells (9, 24). Second, the molecular basis for the interaction between ASAP1 and cortactin that we identified is different from previous work, which identified a PXXP motif that distinguishes ASAP1a from ASAP1b as the cortactin binding site (12, 29); ASAP1b could not be shown to interact with cortactin (11, 28). In contrast, we found that ASAP1a and ASAP1b bound cortactin to the same extent. Furthermore, a recombinant protein comprised of the PXXP motif identified as the binding site in the previous work neither bound cortactin, as determined by immunoprecipitation, nor colocalized with cortactin, as determined by immunofluorescence. This recombinant protein had little effect on the cellular localization of cortactin. Instead of a PXXP motif, the SH3 domain of ASAP1 contributes to binding cortactin. A recombinant ASAP1 mutant lacking the SH3 domain was unable to bind cortactin as determined by immunoprecipitation, did not colocalize with cortactin, and blocked podosome formation.
We are currently examining the molecular mechanism by which the SH3 domain of ASAP1 contributes to podosome formation and the binding of cortactin. Our result that FAK increased the interaction between ASAP1 and cortactin has led us to consider two mechanisms by which the SH3 domain may mediate binding to cortactin. One is that FAK acts as a bridge between the proteins. The results of experiments using SH3 domain point mutants exclude this possibility. The other is that FAK phosphorylates ASAP1 and/or cortactin directly or indirectly. The phosphorylation may stimulate the interaction of ASAP1 and cortactin. The data available from the point mutants did not provide a test of the second possibility but do indicate that FAK binding and cortactin binding were at least partly independent. A related unresolved question is whether cortactin, FAK, or both bind to ASAP1 to induce podosomes.
Another difference between our results and those previously reported (25) is related to the role of CIN85 binding to ASAP1. The interaction is mediated by the SH3 domains of CIN85 and an atypical PXPXPR motif in ASAP1. We found that a mutant ASAP1 that does not bind CIN85 supported podosome formation as well as did wild-type ASAP1. Dominant negative CIN85 has been reported to block invadopodium formation (25), which was interpreted as a requirement for the CIN85-ASAP1 complex. The apparent discrepancy between the results could be due to differences between cell types or between podosomes and invadopodia. Furthermore, CIN85 could function independently of ASAP1 to induce invadopodia, which would explain the results that a mutant of ASAP1 that does not bind CIN85 supported podosome formation but that dominant negative CIN85 blocked the formation.
We found that the BAR domain of ASAP1 contributes to podosome formation. In previous work, we found that the BAR domain induces tubulation of lipid bilayers (27). Given that podosomes are comprised of labyrinths of tubulated membranes (5), the BAR domain could contribute by inducing the observed tubulation of membranes. Alternatively, the BAR domain could function as a sensor of tubulation (8, 9, 14, 32), targeting ASAP1 to the site of imminent podosome formation, or the BAR domain could bind other proteins involved in forming podosomes.
With its multiple functional domains, ASAP1 may be a coincidence detector that regulates formation of podosomes/invadopodia. The result that both phosphorylation of ASAP1 and the presence of the SH3 domain were required for podosome formation has at least two possible explanations. One is that the events are codependent: phosphorylation is necessary for protein binding to the SH3 domain or vice versa. However, [
SH3]ASAP1 was efficiently phosphorylated; [Y782F]ASAP1, which cannot be phosphorylated, bound cortactin as efficiently as wild-type ASAP1; and the expression of [Y527F]c-Src did not affect ASAP1-cortactin association. The remaining explanation is that the two signals are independently generated but impinge on a single target, ASAP1. The simultaneous presence of the two signals leads to the cellular response.
| ACKNOWLEDGMENTS |
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This work was supported by the Intramural Research Program of the National Cancer Institute, Department of Health and Human Services.
| FOOTNOTES |
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Published ahead of print on 24 September 2007. ![]()
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