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Molecular and Cellular Biology, January 2008, p. 422-434, Vol. 28, No. 1
0270-7306/08/$08.00+0 doi:10.1128/MCB.02335-06
Copyright © 2008, American Society for Microbiology. All Rights Reserved.
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Department of Animal Molecular Genetics, Graduate School of Biological Sciences, Nara Institute of Science and Technology, 8916-5 Takayama, Ikoma, Nara 630-0101, Japan
Received 15 December 2006/ Returned for modification 1 April 2007/ Accepted 19 October 2007
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, MADM, and MLF1IP/KLIP1/CENP-U(50) (17, 25, 47). In biological studies, there have been several observations suggesting that MLF1 is physiologically involved in a tumor suppressor pathway. MLF1 has been found to be overexpressed in more than 25% of MDS-associated cases of AML, in the malignant transformation phase of MDS, and in lung squamous cell carcinoma (27, 38). The aberrant overexpression is usually related to mutations and to inactivation of p53 in various cell lines (47). We recently reported that MLF1 is a negative regulator of cell cycle progression that functions upstream of the tumor suppressor p53 and its novel E3 ubiquitin ligase COP1 (11, 47). MLF1 suppresses the activity of COP1 through physical interaction with CSN3, the third subunit of the COP9 signalosome complex (CSN), and consequently induces the arrest of cell growth due to an accumulation of p53. Although the regulatory mechanism of this novel CSN-COP1-p53 pathway located downstream of MLF1 remains to be elucidated, in plants, CSN and COP1 function together as a repressor of photomorphogenesis, i.e., light-mediated development (36). A knockdown of CSN3 in mammalian cells results in a reduced amount of CSN complex and in a failure to suppress COP1-mediated degradation of p53 after exposure to the MLF1 signal and genotoxic stress (47), which implies that CSN is required for the proper functioning of COP1 with regard to its mammalian substrates.
The fusion protein NPM-MLF1 consists of more than half of the amino terminus of NPM and almost the entire MLF1 sequence (46). In leukemia, NPM can fuse with two additional partners, creating NPM-ALK and NPM-RAR
, which are associated with anaplastic large-cell lymphomas and acute promyelocytic leukemia, respectively (28, 35). These three translocations exhibit totally different clinical properties, implying that the deregulation of the carboxyl-terminal proteins determines the phenotype of malignancy. It is believed that the functional importance of the NPM region is mainly for dimerization or heteromerization, leading to the constitutive activation of signaling pathways or the sequestration of normal counterparts (3, 34). NPM-MLF1 appears to be unique in its oncogenic properties. In a normal setting, both NPM and MLF1 are independently involved in distinct pathways that are essential for p53 accumulation, leading to cell growth arrest or apoptosis. Under oncogenic stress conditions, NPM stabilizes the Arf-Mdm2-p53 pathway by binding directly to Arf and by recruiting it to the nucleoli, which leads to the inactivation of Mdm2 and the accumulation of p53. Recently, cytoplasmic NPM mutants, designated NPMc+, have been identified in approximately 50 to 60% of patients with normal karyotypic AML (13), suggesting that a disturbance in the shuttling balance of NPM is a leukemogenic event. Similarly, MLF1 stabilizes p53 by suppressing COP1 activity through CSN3 and MLF1 relocates from the cytoplasm to the nucleolus by forming a leukemic fusion protein with NPM (NPM-MLF1). However, the oncogenic properties of NPM-MLF1 and the role of MLF1 in the leukemic protein have not been characterized.
In this study, we addressed two important questions about the properties of MLF1: how does cytoplasmic MLF1 interact with the CSN3-COP1-p53 tumor suppressor pathway, despite the fact that these downstream factors are mainly located in the nucleus; and what are the transforming function of NPM-MLF1 and the contribution of the MLF1 sequence in NPM-MLF1 in terms of cell transformation? We show here that MLF1 contains the nuclear export signal (NES) sequence and the putative nuclear localization signal (NLS) sequences and shuttles between the cytoplasm and the nucleus. MLF1 containing a mutant NES accumulated in the nucleus and enhanced p53-mediated growth arrest. (During the preparation of our manuscript, Winteringham et al. reported the presence of a NES sequence in murine MLF1 [45]. The region of the murine motif is identical to that in human MLF1.) Second, we found that NPM-MLF1 antagonizes the activation of p53 and facilitates escape from senescence. Disruption of the MLF1-derived NES motif in NPM-MLF1 abrogated the cellular transformation activity mediated by this fusion protein, suggesting that a shuttling imbalance of MLF1 due to aberrant genetic alterations increases susceptibility to oncogenic transformation.
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2) sequence. Culture supernatants containing retroviruses harvested 48 to 72 h after transfection were used to infect proliferating murine embryonic fibroblasts (MEFs) and primary murine bone marrow (BM) cells. Cell culture, transfection, and assays. 293T human kidney cells, NIH 3T3 (Arf-null, p53 WT) mouse fibroblasts (provided by C. J. Sherr and M. F. Roussel), and Arf-inducible NIH 3T3 metallothionein (MT)-Arf cells (22) were cultured in Dulbecco's modified Eagle's medium (DMEM) supplemented with 10% fetal bovine serum (FBS), 2 mM glutamine, 100 U/ml of penicillin, and 100 µg/ml of streptomycin (GIBCO/BRL) and transfected with expression vectors via the calcium phosphate-DNA precipitation method (6, 42). For subcellular localization analysis, 293T cells were photographed under (GFP) fluorescence microscopy (Olympus, Japan) at 48 to 72 h after transfection with and without treatment with leptomycin B (LMB; 10 ng/ml; provided by M.Yoshida) (48). For the colony formation assay, NIH 3T3 cells transfected in 35-mm-diameter dishes were replated at 1:10 and 1:100 dilutions onto duplicate 100-mm-diameter dishes, selected in the presence of puromycin (5 µg/ml; Clontech) for 5 days, and allowed to form colonies for an additional 9 days in the absence of the drug. Only GFP-positive colonies were enumerated under fluorescence microscopy. For the Arf induction assay, GFP-positive mixed populations of MT-Arf cells were selected in culture with puromycin (5 µg/ml), followed by cell sorting (FACS Vantage; Becton Dickinson), and expanded in 60-mm-diameter culture dishes for further analysis. For flow cytometry analysis of DNA content, cells were suspended in a 1-ml solution of 0.1% sodium citrate and 0.1% Triton X-100 containing 50 µg/ml of propidium iodide and treated with 1 µg/ml of RNase for 30 min at room temperature. Fluorescence from the propidium iodide-DNA complex was measured with a FACScan flow cytometer (Becton Dickinson), and the percentages of cells in phases G1, S, and G2/M of the cell cycle were determined with Modifit cell cycle software. Bromodeoxyuridine (BrdU) incorporation was determined using a BrdU labeling and detection kit (Roche) according to the manufacturer's instructions. Briefly, cells were incubated in 10 µM bromodeoxyuridine for 15 min, treated with 70% ethanol-glycine (50 mM, pH 2.0), and stained with anti-BrdU mouse monoclonal antibody and fluorescein isothiocyanate-linked anti-mouse immunoglobulin G.
GST pull-down assay. cDNA fragments containing the MLF1/WT (residues 1 to 268) and the MLF1 mutant (residues 1 to 130 and 126 to 268) coding sequences were inserted into the pGEX vector (Pharmacia) in frame with glutathione S-transferase (GST). The nucleotides corresponding to the putative NES sequence of MLF1 (residues 88 to 100) and the mutant NES (leucine-to-alanine substitution at residue 89) sequence were synthesized and inserted into the pGEX vector in frame with GST. GST fusion proteins were expressed in bacteria and were purified as described previously (41). Crude cell extracts containing endogenous CRM1 proteins were isolated from proliferating NIH 3T3 cells in an EBC buffer (50 mM Tris-HCl [pH 7.5], 120 mM NaCl, 0.5% NP-40, and 1 mM EDTA) supplemented with 5 mg/ml of aprotinin, 1 mM phenylmethylsulfonyl fluoride, 0.1 mM NaF, 0.1 mM NaVO4, and 1 mM dithiothreitol. Binding was performed by incubating GST fusion proteins immobilized on the beads with cell lysates in the EBC buffer supplemented with 0.5% bovine serum albumin at 37°C for 1 h, and the protein complexes were washed in the same buffer. Bound CRM1 proteins were detected by immunoblotting using a CRM1-specific antibody. The same amounts of beads used for the binding assay were subjected to gel electrophoresis and stained with Coomassie blue to quantitatively examine the GST proteins.
MEF analyses. Primary MEFs (passaged 1 to 3 times after they were prepared from 13.5-day-old embryos) were cultured in DMEM supplemented with 10% FBS, 2 mM glutamine, 100U/ml of penicillin, 100 µg/ml of streptomycin, and 0.1 mM nonessential amino acids and infected twice with pMSCV-GFP-NPM-MLF1, pMSCV-GFP-NPM-MLF1/L89A and empty pMSCV-GFP retroviral supernatants in the presence of Polybrene (4 µg/ml). GFP-positive cells with puromycin resistance (5 µg/ml) were propagated and maintained according to a 3T6 protocol based on a schedule described by Todaro and Green (40). In brief, after cells were selected in puromycin, they were seeded at 6 x 105 cells per 60-mm dish and set in culture for 3 days, which is referred to as passage 1 in this protocol. The cells were then replated at approximately 6 x 105 to 7 x 105 cells per 60-mm-diameter dish every 3 days, and the total number of cells proliferating from passage 1 was counted. For the colony formation assay at low density, MEFs were seeded at 6 x 105 cells per 60-mm dish and infected twice with pMSCV-GFP-NPM-MLF1, pMSCV-GFP-NPM-MLF1/L89A, and empty pMSCV-GFP retroviral supernatants with and without pMSCV-GFP-RasV12 retroviral supernatants in the presence of Polybrene (4 µg/ml). At 17 days after retroviral infection, foci were fixed in 4% paraformaldehyde and stained in 0.4% crystal violet. For colony formation in soft agar, cells cloned from individual foci were resuspended in complete medium containing 0.3% low-melting-point agarose and seeded at 1 x 104 cells in 1 ml of soft agar per 35-mm dish. The formation of spherical colonies was evaluated after 2 weeks by microscopy.
Protein analyses.
Cell lysis, sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE), and immunoblotting were performed as described previously (22, 47). In brief, to prepare lysates directly for immunoblotting, cell lysates in an EBC buffer were mixed with the same amount of 2x SDS sample buffer (80 mM Tris-HCl, pH 6.8, 0.2 M dithiothreitol, 2% SDS, 20% glycerol, and 0.1% bromophenol blue) and boiled for 4 min. Protein samples were separated on SDS-polyacrylamide gels under reducing conditions, transferred to a polyvinylidene difluoride membrane (Millipore), and immunoblotted with the antibodies indicated. Proteins were detected with an ECL blotting system (Amersham) according to the manufacturer's instructions. MLF1 and NPM-MLF1 proteins were detected using a mouse monoclonal antibody to MLF1 (3E9) generated with bacterially produced human MLF1 polypeptides (27). Rabbit polyclonal antibodies to CRM1 (H-300), p53 (FL-393), and CDK2 (M2), and a goat polyclonal antibody to p21 (C-19) were purchased from Santa Cruz Biotechnology. A mouse monoclonal antibody to
-tubulin (GTU-88) and a rabbit polyclonal antibody to p19Arf (Ab80) were obtained from Sigma and Abcam, respectively. Rabbit polyclonal antibodies to COP1 and p21 were generated using bacterially produced polypeptides in our laboratory. A mouse monoclonal antibody to MDM2 was provided by Arnold J. Levine.
Retroviral infection and transformation assays with primary BM cells. BM cells were aseptically isolated from the femurs and tibias of 6- to 8-week-old C57BL/6 mice (CLEA Japan, Inc.) and incubated overnight in BM medium (DMEM supplemented with 15% heat-inactivated FBS, 5% WEHI3B-conditioned medium, murine interleukin-3 [mIL-3; 6 ng/ml], human IL-6 [hIL-6; 10 ng/ml], murine stem cell factor [mSCF; 50 ng/ml], 2 mM glutamine, 100 units/ml of penicillin, and 100 µg/ml of streptomycin) (recombinant cytokines were from Genzyme). Nucleated BM cells were plated at approximately 107 cells per well in 6-well plates and infected twice with 5 ml of culture supernatants containing retroviruses encoding GFP, GFP-NPM-MLF1, and GFP-NPM-MLF1/L89A, according to the spin infection procedure, in the presence of Polybrene (4 µg/ml). For the liquid culture, infected BM cells were selected in puromycin (5 µg/ml) for 5 days and split and maintained every 4 days in BM medium.
For the colony formation assay, BM cells were cultured in BM medium for 72 h after retroviral infection, and GFP-positive populations of BM cells were isolated by cell sorting with FACS Vantage. Cells were plated at 1,000 cells per 35-mm dish onto methylcellulose-based medium containing mIL-3 (10 ng/ml), hIL-6 (10 ng/ml), mSCF (50 ng/ml), and human erythropoietin (3 U/ml) (MethoCult GF M3434; StemCell Technologies, Inc.). After 3 weeks, the colonies containing more than 100 cells were enumerated. For the second plating, the cells were collected from the methylcellulose-based medium, counted, and replated at 1,000 cells per 35-mm dish into fresh medium. Remaining cells were cultured in BM medium. Some colonies and liquid cultures were cytocentrifuged onto glass slides, stained with a May-Grunwald Giemsa solution (Merck), and viewed by phase-contrast microscopy in order to evaluate the lineage.
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50-125) was found in the nucleus, indicating that the region (amino acids 50 to 125) contains a sequence required for the cytoplasmic localization (Fig. 1A).
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FIG. 1. The cytoplasmic localization of MLF1 is disrupted by LMB. (A) Subcellular localization and schematic representation of MLF1 deletion mutants. 293T cells were transfected with the GFP-MLF1/WT and GFP-MLF1 mutant expression vectors and viewed by using fluorescence (GFP) microscopy (upper panels). Results of growth inhibition and subcellular localization are summarized on the right (lower panel). (B) Effects of LMB treatment on the subcellular distribution of MLF1. 293T cells transfected with GFP-MLF1 were treated with 10 ng/ml of LMB and photographed at 1, 3, and 6 h by fluorescence (GFP) microscopy. Cells were also photographed at 24 h after the removal of LMB from the culture. PC, phase contrast.
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After a detailed examination of the amino acid sequence 50 to 125, we identified a putative NES consensus sequence at residues 89 to 96. This sequence was conserved in human and mouse MLF1 and contained four regularly spaced hydrophobic amino acids, which is characteristic of a typical NES motif (Fig. 2A) (12, 23). To determine whether MLF1 can interact directly with CRM1, we generated GST-tagged recombinant proteins and performed an in vitro binding assay using a lysate prepared from murine NIH 3T3 fibroblasts. Full-length MLF1/WT and the N-terminal-half mutant MLF1/1-130 efficiently bound to CRM1 in vitro, whereas the C-terminal-half mutant MLF1/126-268 did not (Fig. 2B), consistent with the idea that the putative NES sequence found at amino acids 89 to 96 is the CRM1-interaction site. To directly test whether the sequence 89 to 96 functions as the CRM1-binding site, we performed an in vitro binding assay and found that CRM1 did bind to the GST recombinant protein containing the minimum region of this putative NES sequence, whereas conversion of the conserved leucine-to-alanine substitution at residue 89 (NES/L89A) abolished the interaction (Fig. 2C). Furthermore, we tested whether MLF1 binds to CRM1 in living cells. In human leukemia K562 cells, which stably express endogenous MLF1 and CRM1, CRM1 protein was detected in an anti-MLF1 immunoprecipitate (Fig. 2D, upper panel), indicating that MLF1 interacts with CRM1 in vivo. We also identified a putative consensus sequence of NLSs at residues 168 to 174 and 232 to 236 (Fig. 2A). To determine whether these two regions are required for the nuclear import of MLF1, we introduced GFP-tagged expression vectors carrying MLF1 deletion mutations lacking putative NLS sequences of the C terminus (MLF1/1-229 and MLF1/1-166) with and without a leucine-to-alanine point mutation (MLF1/L89A) in the NES sequence into 293T cells (Fig. 2E, upper panel). Wild-type MLF1 was detected largely in the cytoplasm, with a small fraction in the nucleus, while MLF1/L89A was found exclusively in the nucleus (Fig. 2E, left panel). MLF1 deletion mutants (MLF1/1-229 and MLF1/1-116) with intact NES sequences were detected in the cytoplasm, whereas GFP signals were distributed diffusely in both the cytoplasm and the nucleus in the cells expressing the identical deletion mutants harboring a leucine-to-alanine mutation in the NES sequence (1-229/L89A and 1-166/L89A) (Fig. 2E, middle and right panels). These results show that MLF1 contains an NES motif in the N terminus and NLS motifs in the C terminus and shuttles between the nucleus and the cytoplasm by interacting directly with CRM1.
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FIG. 2. A putative NES in MLF1 and binding to CRM1. (A) Putative NES sequences of human and mouse MLF1 are aligned with known NES sequences identified in the NPMc+ mutant, mitogen-activated protein kinase kinase (MAPKK), and RanBP1. Well-conserved hydrophobic residues identical to a consensus sequence are boxed. The star indicates the location of residue 89, where we generated a lencine-to-alanine point mutant. Schematic representations of the primary structure of human MLF1 and its leucine-to-alanine mutant (L89A) are shown at the bottom. (B) MLF1 interacts with CRM1 in vitro. GST-control cell fusion or GST-MLF1 mutant fusion proteins shown at the top of the panel were incubated with NIH 3T3 cell lysates containing endogenous CRM1 proteins. Bound proteins were detected by immunoblotting with antibody to CRM1. The amounts of GST proteins absorbed on the beads were evaluated by Coomassie brilliant blue staining (CBB). The positions of the GST-MLF1/WT and the GST-MLF1 mutant fusion proteins are indicated with arrowheads. (C) The NES core sequence of MLF1 specifically binds to CRM1 in vitro. GST fusion proteins with an intact NES core sequence (NES/WT) corresponding to residues 88 to 100 of MLF1 or the leucine-to-alanine NES mutant (NES/L89A) were incubated with NIH 3T3 cell lysates. Bound proteins were detected by immunoblotting, and the amounts of absorbed GST proteins were evaluated as described in the legend to panel B. (D) Specific interaction between endogenous MLF1 and CRM1 proteins. Endogenous MLF1 protein was immunoprecipitated from the K562 cell lysate shown at the top and analyzed by immunoblotting with antibodies to CRM1 (upper panel) and MLF1 (lower panel). (E) Schematic representations of MLF1 deletion mutants of putative NLS sequences with a NES/L89A mutation and subcellular localization. 293T cells were transfected with the GFP-MLF1/WT and the GFP-MLF1/L89A NLS region deletion mutant (MLF1/1-229, MLF1/1-166, MLF1/1-229/L89A, and MLF1/1-166/L89A) expression vectors (upper panel) and viewed using fluorescence (GFP) microscopy (middle panel). The results of subcellular localization are summarized in the lower panel.
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FIG. 3. Disruption of NES enhances MLF1-induced growth arrest. NIH 3T3 cells (Arf null, p53 WT) were transfected with GFP alone, the GFP-fused WT (MLF1 or NPM-MLF1), and the NES mutant (MLF1/L89A or NPM-MLF1/L89A [leucine 89 of MLF1 sequence is replaced by alanine]) expression vectors and selected in puromycin for 5 days. (A) Subcellular localization of MLF1/L89A. Before puromycin selection, GFP-positive cells were viewed using fluorescence microscopy and photographed. PC, phase contrast. (B) Expression levels of GFP-MLF1, GFP-MLF1/L89A, and endogenous p53 proteins at an early phase are shown by Western blotting with antibodies to MLF1, p53, and -tubulin. (C) At 14 days posttransfection, GFP-positive colonies were enumerated. Data are the averages of three independent experiments shown as means ± standard deviations (SD). (D) Subcellular localization of NPM-MLF1 and NPM-MLF1/L89A. Before puromycin selection, GFP-positive cells were viewed using fluorescence microscopy and photographed. (E) Expression levels of the GFP-NPM-MLF1, GFP-NPM-MLF1/L89A, and p53 proteins at an early phase are shown by Western blotting with antibodies to MLF1, p53, and -tubulin. (F) At 14 days posttransfection, GFP-positive colonies were enumerated. Data are averages of three independent experiments shown as means ± SD. Results shown in panels B and E are representative of three independent experiments.
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NPM-MLF1 actively induces cell immortalization and oncogenic transformation.
We examined further the effects of ectopic expression of the leukemic NPM-MLF1 fusion protein on the growth of primary MEFs. We infected MEFs with retroviruses that expressed GFP alone, GFP-fused NPM-MLF1, and NPM-MLF1/L89A mutant proteins and selected them in puromycin. GFP-positive MEF cultures were propagated according to the "3T6" protocol (40), and the first culture plated after the selection was referred to as passage 1 (Fig. 4A). All MEF cultures infected with retroviral vectors ceased to proliferate and entered senescence at passages 2 to
4. The population of MEFs infected with the GFP control did not increase for more than 10 passages, but some cells regained growth capability at passages 15 to 17. In contrast, MEFs expressing NPM-MLF1 reproducibly recovered from senescence much earlier than the GFP control MEFs. At passages 7 to
8, NPM-MLF1-infected MEFs started to proliferate significantly faster and reached higher cell densities than control cells, after which they continued to proliferate exponentially without recurrently entering into senescence (Fig. 4A). Reverse transcription (RT)-PCR and DNA sequencing revealed that, at passage 16, NPM-MLF1-expressing MEFs contained a missense mutation in one allele, but not in both alleles, of the p53 gene locus, suggesting that NPM-MLF1 can weaken the p53-associated growth-suppressing activity but presumably do not completely inactivate the p53 pathway. The growth rate of MEFs expressing NPM-MLF1/L89A was much lower than that of MEFs expressing NPM-MLF1 or GFP alone (Fig. 4A). Consistent with the results obtained for NIH 3T3 cells, the MLF1-derived NES sequence plays an important role in NPM-MLF1-associated activity. We observed little enhancement of apoptosis for the wild-type MEFs and little effect on the proliferation of p53-null MEFs after the infection of retroviruses encoding wild-type and mutant forms of NPM-MLF1 and MLF1 (see Fig. S1 in the supplemental material), indicating that the defect in proliferation is due to the p53-dependent proliferation and not to apoptosis. Therefore, the ectopic expression of NPM-MLF1 in MEFs facilitated escape from senescence much earlier and the MLF1-derived NES sequence is essential for this function.
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FIG. 4. Accelerated immortalization and transformation of MEFs expressing NPM-MLF1. (A) Growth curves of MEFs according to the 3T6 protocol. Primary MEFs were infected with retroviruses that expressed GFP alone or GFP-fused NPM-MLF1 or NPM-MLF1/L89A protein and then selected in puromycin. At 3-day intervals, cells were harvested, counted, and passaged by replating at 6 x 105 cells per 60-mm-diameter dish. Data are averages of three independent experiments shown as means ± standard deviations (SD). (B) Colony formation assay using primary MEFs infected with empty, NPM-MLF1, or NPM-MLF1/L89A expression vectors with or without oncogenic Ras. Foci of transformed cells were stained with crystal violet and enumerated. Data are averages of two independent experiments shown as means ± SD. (C) Colony formation in soft agar. Primary MEFs were infected with empty, NPM-MLF1 or NPM-MLF1/L89A expression vectors with or without oncogenic Ras. (D) MEFs pooled from the focus formation assay shown in panel B were lysed and analyzed by immunoblotting with antibodies to MLF1, p19Arf, p53, p21, and -tubulin. Results shown in panels B (left), C, and D are representative of two independent experiments.
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NPM-MLF1 impairs p53 activation induced by genotoxic stress and oncogenic cellular stress. NPM and MLF1 wild types are both involved in the stabilization of p53 protein through the Arf-Mdm2-p53 and CSN3-COP1-p53 pathways, respectively. Therefore, it is likely that the leukemic fusion protein formed by these two interferes with both the Mdm2 and the COP1 pathways and, thereby, counteracts p53 accumulation in cells exposed to genotoxic stress. To explore this possibility, we examined the effect of NPM-MLF1 expression on genotoxic stress-induced activation of p53. We infected MEFs at passage 2 with retroviruses expressing GFP alone or GFP-fused NPM-MLF1 or NPM-MLF1/L89A protein. After selection in puromycin, these MEFs were treated with UV light (25 J/m2), and the kinetics of endogenous p53, p21, COP1, and Mdm2 protein expression were analyzed (Fig. 5A). UV irradiation induced a distinct accumulation of p53, p21, and Mdm2 and a concomitant decrease of COP1 in GFP control cells but failed to induce full upregulation of p53 and p21 expression in cells infected with the NPM-MLF1 retrovirus. The level of COP1 seemed to decline less in cells expressing NPM-MLF1 than in control cells. NPM-MLF1/L89A expression had little effect on suppressing p53 stabilization following UV irradiation. MEFs expressing NPM-MLF1 were immortalized at a late passage and harbored a mutant p53 gene at one allele, with the other locus intact, expressing a higher basal level of p53. Upon stimulation of these cells with UV, the level of p53 increased further, but little expression of p21 and MDM2 occurred. Interestingly, a marked downregulation of COP1 expression was observed in these cells in response to UV irradiation (Fig. 5B), presumably because these cells tolerate high levels of mutant p53. Importantly, the level of NPM-MLF1 protein remained unchanged between the early and late passages (Fig. 5C). To determine whether NPM-MLF1 impairs p53 activation in response to other genotoxic stress signals, we continuously treated MEFs with doxorubicin (DXR; 0.5 µg/ml) and analyzed the kinetics of the p53, p21, COP1, and Mdm2 proteins (Fig. 5D). MEFs expressing NPM-MLF1 were defective in the full activation of p53 and p21 in response to DXR compared with that of cells infected with the GFP control. These results indicate that the expression of NPM-MLF1 affects the normal stabilization of p53 in response to genotoxic stress, in which the MLF1-derived NES sequence plays an essential role.
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FIG. 5. NPM-MLF1 fusion protein prevents full induction of p53 by genotoxic stress. Primary MEFs were infected with retroviruses expressing GFP alone or GFP-fused NPM-MLF1 or NPM-MLF1/L89A protein and then selected in puromycin. NPM-MLF1 cells were propagated to the late passage (p16), and the p53 status was determined by RT-PCR and DNA sequencing. (A and B) Cells were treated with 25 J/m2 of UV irradiation, and the expression levels of p53, p21, COP1, Mdm2, and -tubulin were measured by immunoblotting at the indicated times after exposure. (C) Expression levels of NPM-MLF1 proteins at early and late passages are shown by immunoblotting with an antibody to MLF1. (D) Cells were treated in culture with 0.5 µg/ml of DXR, and p53, p21, COP1, Mdm2, and -tubulin were measured by immunoblotting at the indicated times after coculture with DXR (left panel). The expression level of NPM-MLF1 protein is shown by immunoblotting with an antibody to MLF1 (right panel). All the data shown in panels A, B, C, and D are representative of two independent experiments.
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FIG. 6. NPM-MLF1 fusion protein prevents full induction of p53 by oncogenic cellular stress. The inducible NIH MT-Arf cells were transfected with GFP control, GFP-fused NPM-MLF1, and NPM-MLF1/L89A expression vectors and then selected in puromycin, followed by cell sorting. (A) Expression levels of the NPM-MLF1 (WT and L89A) proteins are shown by immunoblotting with an antibody to MLF1 (left panel). Cells treated with zinc for the indicated times were harvested and analyzed by immunoblotting with antibodies to p19Arf, p53, p21, COP1, Mdm2, and CDK2 (right panel). (B) NIH MT-Arf cells treated with (+Zn) and without (-Zn) zinc for 96 h were photographed (left panel). At 72 h post-HA-Arf induction, cells were subjected to a BrdU incorporation assay (left panel) and a flow cytometric analysis of the DNA content (right panel) for cell cycle analysis. More than 500 BrdU-stained cells were enumerated. Percentages of BrdU uptake are shown at the bottom right of each photograph (left panel).
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FIG. 7. Growth advantage and p53 instability of hematopoietic cells expressing NPM-MLF1. Freshly isolated BM cells were infected with retroviruses expressing GFP alone or GFP-fused NPM-MLF1 or NPM-MLF1/L89A protein. (A) Growth curve for BM cells. Infected BM cells were selected in puromycin and maintained in BM medium. Cells were enumerated and split every 4 days. Data are averages of three independent experiments shown as means ± standard deviations. (B) GFP-positive cells in infected BM cells were isolated by cell sorting and plated in a methylcellulose-based medium. Colonies were viewed after 3 weeks (upper panels, "1st round") (original magnification, x16). Viable cells were harvested, counted (lower panel, 1st), and replated in a fresh medium. Colonies were viewed (upper panels), and viable cells were enumerated (lower panel) after 2 weeks ("2nd round"). (C) Infected BM cells, which were selected and maintained in BM medium as shown in panel A, were harvested after 3 weeks postinfection. Expression levels of NPM-MLF1, p53, p21 and -tubulin were shown by immunoblotting. (D) Cells, selected and maintained as described in the legend to panel C, were treated with 25 J/m2 of UV irradiation, and p53, p21 and -tubulin expression levels were measured by immunoblotting at the indicated times after exposure. Results shown in panels C and D are representative of two independent experiments.
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Although the regulatory mechanism of MLF1 shuttling is currently unknown, several possible explanations are emerging from the study of proteins that interact with MLF1. MLF1 contains the consensus sequence RSXSXP for binding to 14-3-3 proteins and interacts with 14-3-3
when a serine residue in this motif is phosphorylated (25, 30). 14-3-3 proteins function in part as a modulator of various signaling proteins including Raf-1, Bad, and Cdc25 (15). For instance, the binding of 14-3-3 to Raf-1, a Ser/Thr kinase downstream of Ras, keeps it in an inactive state by promoting a conformational change and prevents activation of the Ras signaling pathway (29). In response to DNA damage, the mitotic inducer Cdc25 is phosphorylated by Chk1 and sequestered to the cytoplasm by the 14-3-3 protein during the interphase of the cell cycle, which prevents activation of the cyclin B/Cdc2 kinase in the nucleus (5, 26). Likewise, it is likely that the binding of 14-3-3 to MLF1 in the cytoplasm is required for the inhibition of MLF1 activity by promoting a conformational change or by masking a certain motif leading to the regulatory segregation of MLF1 from the nucleus in proliferating cells. However, a kinase which phosphorylates MLF1 and thereby promotes its binding to 14-3-3 has yet to be identified, although kinase activity toward MLF1 has been detected (25).
We recently reported that CSN3, a subunit of the CSN, is a direct mediator of MLF1 signaling to the COP1-p53 pathway (47). CSN3 itself has no kinase activity, but the CSN complex associates with kinases including inositol 1,3,4-triphosphate 5/6-kinase (39), casein kinase II (CK2), and protein kinase D (43). The last two kinases phosphorylate p53 and c-Jun through CSN3. CK2 phosphorylates threonine 155 of p53, which promotes proteasome-mediated degradation (43). Interestingly, the 14-3-3-binding motif (residues 31 to 36) in MLF1 contains a putative CK2 phosphorylation site (residues 31 to 34). Therefore, it is possible that MLF1 is one of the substrates of CK2, although the CK2-interacting protein that determines the specificity of CK2 remains to be determined. A recent study showed that ATM kinase directly phosphorylates COP1, which in turn leads to the autodegradation of COP1 and consequent stabilization of p53 (10). Interestingly, CSN3 was also identified as a substrate of ATM in DNA damage-induced apoptosis, and its phosphorylation requires the interaction of ATM with another subunit of CSN (24). Since CSN and COP1 function cooperatively, these observations suggest that CSN integrates various signals triggered by the DNA damage into the p53 activation pathway through regulation of the COP1 E3 ligase activity. More studies will be required to clarify how the shuttling activity of MLF1 is involved in the function of the CSN-COP1 axis and their associated kinases.
We have reported, for the first time, that the leukemic fusion protein NPM-MLF1 exhibits transformation activity in collaboration with the active form of Ras, presumably by preventing full activation of the p53 pathway. Both NPM and MLF1 stabilize p53 protein through the Arf-Mdm2-p53 and CSN3-COP1-p53 pathways, respectively, whereas NPM-MLF1 impairs the expression of p53 in response to genotoxic or oncogenic stress. The region of NPM retained in NPM-MLF1 includes a NES sequence (residues 94 to 102) and a bipartite NLS sequence (residues 141 to 157) (19, 44), while the region of MLF1 contains a NES sequence and two putative NLS sequences (Fig. 2A, residues 168 to 174 and 232 to 236). The acquisition of additional NES and NLS sequences should confer more powerful shuttling activity on the leukemic fusion protein. This is reminiscent of the cytoplasmic NPM mutant (NPMc+) recently identified in characteristic karyotypic AML (13). In this mutant allele, an aberrant insertion at the 3' region of the open reading frame in the NPM gene locus resulted in a frame shift mutation and the addition of a newly generated functional NES sequence to the C terminus. The NPMc+ mutant retains some shuttling ability because treatment with LMB relocated the protein to the nucleus. The NPMc+ mutant protein presumably interferes with the Arf-Mdm2-p53 pathway by relocating Arf from the nucleolus to the cytoplasm (8, 9). In the case of NPM-MLF1, disruption of the MLF1-derived NES sequence impaired the growth-promoting activity of the fusion protein, suggesting that accelerated shuttling, not a loss of shuttling, is critical for leukemogenesis. Because the t(3;5) chromosomal translocation, which produces NPM-MLF1, is associated with MDS and AML with multilineage dysplasia and is correlated with a poor prognosis (33, 46), a shuttling imbalance in MLF1 and NPM in normal CD34+ hematopoietic stem cells may perturb the regulation of p53 stability and contribute to the oncogenic conversion of normal stem cells to leukemic stem cells.
This work was supported by Grants-in-Aid for Scientific Research and for Cancer Research from the Ministry of Education, Science, and Culture of Japan.
Published ahead of print on 29 October 2007. ![]()
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