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Molecular and Cellular Biology, January 2009, p. 116-128, Vol. 29, No. 1
0270-7306/09/$08.00+0 doi:10.1128/MCB.00829-08
Copyright © 2009, American Society for Microbiology. All Rights Reserved.
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Department of Medicine, Baylor College of Medicine, Houston, Texas 77030
Received 22 May 2008/ Returned for modification 21 July 2008/ Accepted 17 October 2008
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F508) to the aggresome. Importantly, the ubiquitin ligase function of CHIP is required in targeting preaggresomal structures to the aggresome by promoting an iNOS interaction with histone deacetylase 6, which serves as an adaptor between ubiquitinated proteins and the dynein motor. This study reveals a critical role for CHIP in the aggresome pathway. |
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F508), into specialized "holding stations" called aggresomes (14). The aggresome is typically formed in the cell at a perinculear location near the microtubular organizing center (MTOC) and the centrosome. Aberrant folding and defective trafficking of CFTR
F508 are the principal causes of cystic fibrosis. Recent evidence suggests that aggresome formation is also a physiologic mechanism to regulate certain cellular proteins (16). This process, termed "physiologic aggresome," is exemplified by cellular regulation of inducible nitric oxide synthase (iNOS). Although it is clear that proteasomal inhibition results in acceleration of the aggresome pathway, the molecular effectors involved in targeting proteins to aggresome sequestration are not well studied.
CHIP (carboxy terminus of Hsp70-interacting protein) is a highly conserved protein that has a tetratricopeptide repeat (TPR) domain at its amino terminus and a U-box domain at its carboxy terminus (3). CHIP interacts with the molecular chaperones Hsc70-Hsp70 and Hsp90 through its TPR domain, whereas its U-box domain contains its E3 ubiquitin ligase activity. Through its interaction with molecular chaperones, CHIP has been shown to mediate client substrate ubiquitination and degradation by the proteasome (6, 12, 20). The combination of chaperone binding and ubiquitin ligase activity suggests a multifaceted role for CHIP in facilitating the switch from chaperone-mediated folding/maturation to proteasome-mediated degradation via ubiquitination (19). Such a role for CHIP has been demonstrated for several client substrates including CFTR
F508, polyglutamine-expanded huntingtin, ataxin-1, and ataxin-3 (2, 12, 20). CHIP was also found to inactivate endothelial NOS by displacing it from the Golgi apparatus to a detergent-insoluble fraction (13). A recent study demonstrated that deletion of CHIP resulted in a decrease in aggregation of tau protein (7). Whether or not CHIP has a role in aggresome formation remains unknown.
iNOS, an important host defense protein, is responsible for nitric oxide (NO) synthesis in response to cytokines and inflammatory mediators (8). iNOS has been shown to be regulated by chaperones (24), by the ubiquitin proteasome pathway (18, 21), and by aggresome formation (16). Therefore, iNOS regulation constituted an ideal model to study the cellular triage decisions between these various protein quality control pathways. We show that CHIP interacted with iNOS and promoted its ubiquitination and degradation by the proteasome. More importantly, this study reveals a previously unrecognized role for CHIP in promoting aggresome formation. CHIP promoted iNOS sequestration to the aggresome. CHIP-mediated iNOS targeting to the proteasome preceded CHIP-mediated iNOS sequestration to the aggresome. Furthermore, we show that CHIP itself colocalized with iNOS in the aggresome and that knockdown of CHIP resulted in failure of iNOS preaggresome structures to be targeted to the perinuclear mature aggresome. In addition to its interaction with iNOS, CHIP colocalized with the CFTR
F508 aggresome and was required for targeting CFTR
F508 to the aggresome. Importantly, the ubiquitin ligase function of CHIP is required in targeting preaggresomal structures to the aggresome by promoting iNOS interaction with histone deacetylase 6 (HDAC6). The latter serves as an adaptor between ubiquitinated proteins and the dynein motor. This study reveals a critical role for CHIP in the aggresome pathway.
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B-β (C-20) and
-tubulin antibodies were from Santa Cruz (Santa Cruz, CA). BMG-His-1 is a monoclonal anti-His6 antibody from Roche. V9 and GTU-88 are monoclonal anti-vimentin and anti-
-tubulin antibodies from Sigma. 6C5 (Advanced ImmunoChemical, Long Beach, CA) is a monoclonal antibody against glyceraldehyde-3-phosphate dehydrogenase (GAPDH). Polyclonal giantin antibody was from CPR (Berkeley, CA). Polyclonal calreticulin antibody was from Abcam (Cambridge, MA). Monoclonal anti-human CD107
(Lamp1) was from BD Biosciences (Franklin Lakes, NJ). Erythro-9[3-(2-hydroxynonyl)] adenine (EHNA) was from Sigma. Nocodazole was from Calbiochem (Gibbstown, NJ). Antibodies against
-tubulin (B-5-1-2) and acetylated
-tubulin (6-11B-1) were from Abcam (Cambridge, MA). HDAC6 antibody (H-300) was from Santa Cruz (CA). Cell culture. HEK293 cells were cultured in improved minimal essential medium Mediatech, Herndon, VA), and human bladder transitional cell papilloma (RT4) cells were cultured in McCoy's medium (Mediatech). Each medium was supplemented with 2 mM glutamine, 1x antibiotic-antimycotic cocktail, and 10% heat-inactivated fetal bovine serum (Invitrogen). All cells were maintained at 37°C in 5% CO2.
Normal primary human bronchial epithelial cells (Lonza) were cultured in bronchial epithelial cell growth medium (Lonza) containing 130 ng/ml bovine pituitary extract, 5 x 10–5 mM retinoic acid, 1.5 µg/ml bovine serum albumin, 20 IU/ml nystatin, 0.5 mg/ml hydrocortisone, 25 ng/ml human epithelial growth factor, 0.5 µg/ml epinephrine, 10 µg/ml transferrin, 5 µg/ml insulin, 6.5 ng/ml triiodothyronine, and 50 µg/ml gentamicin. Passage 2 cells were cultured at the air-liquid interface onto semipermeable membrane inserts (Transwell-Clear; Corning) in a serum-free, 1:1 mixture of Dulbecco's modified Eagle's medium (Invitrogen) and bronchial epithelial cell growth medium supplemented as above except that 0.5 ng/ml human epithelial growth factor was used. The cultures were grown submerged until cells reached 70% confluence. Thereafter, culture medium was changed daily by replacing fresh medium only in the basal compartment. Cultures were maintained at 37°C in a humidified 5% CO2 atmosphere for a further 2 weeks after confluence until they reached a fully differentiated mucociliary plateau phase. For iNOS induction, differentiated normal primary human bronchial epithelial cells or RT4 cells were stimulated by a mixture of gamma interferon (100 units/ml), interleukin-1β (0.5 ng/ml), and tumor necrosis factor alpha (10 ng/ml).
Plasmids and transfections.
Vectors encoding full-length iNOS cDNA or an iNOS-green fluorescent protein (GFP) fusion were previously described (16, 21). Full-length human CHIP was cloned by reverse transcription-PCR from cDNA of HEK293 cells and fused with a His tag or Flag tag in the pcDNA3.1 expression vector (Invitrogen). Plasmid vectors expressing CHIP with the mutation H260Q (CHIP-H260Q) or CHIP-K30A were kindly provided by Len Neckers. Vectors expressing CFTR
F508-GFP and p50 were gifts from Bruce Stanton and Li-Yuan Yu-Lee, respectively. Vector-based CHIP-specific small hairpin RNA (shRNA) encoding CCAACTTGGCTATGAAGGAGGTTATTGAC, vector-based HDAC6-specific shRNA encoding AGGTCTACTGTGGTCGTTACATCAATGGC, and a control vector-based shRNA encoding TGACCACCCTGACCTACGGCGTGCAGTGC were from Origene (Rockville, MD). Lentivirus vectors encoding CCAACTTGGCTATGAAGGAGGTTATTGAC and TGACCACCCTGACCTACGGCGTGCAGTGC were generated by America Pharma Source (Gaithersburg, MD). Cationic lipid-mediated transient transfection of plasmids was done using Lipofectamine 2000 (Invitrogen) into 70 to 80% confluent cells.
Cell lysis. Cells were rinsed twice with phosphate-buffered saline and lysed on ice for 30 min in the presence of a mix of protease inhibitors (17) in high stringency buffer A (40 mM bis-Tris propane, pH 7.7, 150 mM NaCl, 10% glycerol, and 1% Triton X-100) or in low stringency NETN buffer B (20 mM Tris-Cl, pH 8.0, 100 mM NaCl, 1 mM EDTA, and 0.5% NP-40). In some experiments, 5 mM NEM was added to cell lysis buffer to minimize deubiquitination of iNOS during cell lysis. Lysates were centrifuged (16,000 x g for 15 min at 4°C). The detergent (Triton X-100)-insoluble fraction was dissolved in 1% sodium dodecyl sulfate (SDS). Total protein concentrations were determined by using a bicinchoninic acid reagent, following the manufacturer's instructions (Pierce).
Immunoprecipitation. In experiments examining ubiquitination of iNOS, cells were lysed in buffer A, and 0.5 mg of cell lysates was incubated at 4°C with polyclonal anti-iNOS antibody in a total volume of 500 µl of lysis buffer for 120 min before protein A-Sepharose beads (50 µl of 10% solution) were added to the samples. After further incubation for 60 min at 4°C, beads were washed three times in ice-cold lysis buffer. Immunoprecipitated proteins were eluted by heating at 95°C for 5 min in Laemmli sample buffer (50 mM Tris-HCl, pH 6.8, 2% SDS, 0.001% bromophenol blue, 10% glycerol, 100 mM dithiothreitol). To investigate protein-protein interaction, cells were lysed in NETN buffer B, and 1 mg of cell lysates was precleared by incubation at 4°C with 20 µl of 10% protein A-Sepharose beads in a total volume of 1,000 µl of NETN buffer. Protein A-Sepharose beads were discarded after a 30-min incubation, and appropriate antibodies were added. After a 120-min incubation, 50 µl of 10% protein A-Sepharose beads was added to the samples. Samples were further incubated for 60 min at 4°C, and beads were washed three times in ice-cold lysis buffer. Immunoprecipitated proteins were eluted as above.
Western analysis. Cell lysate (50 µg) or immunoprecipitated proteins were heated at 95°C for 5 min in Laemmli sample buffer and resolved by SDS-polyacrylamide gel electrophoresis (PAGE) (Invitrogen). Proteins were transferred to nitrocellulose membranes by using a semidry transfer cell (Bio-Rad). Membranes were blocked with 5% nonfat milk for 1 h, followed by a 2-h incubation of primary antibody and 1-h incubation of secondary antibody. Immunoreactive bands were visualized with an enhanced chemiluminescence system (SuperSignal West Pico; Pierce). Images were acquired by a cooled, charge-coupled-device camera (Eagle Eye II Still Video System; Stratagene).
Pulse-chase analysis. Cells were pulsed with 0.25 mCi/ml 35S-labeled methionine-cysteine mixture for 1 h. Incorporation of radioactive methionine-cysteine was terminated by incubating cells in Dulbecco's modified Eagle's medium with excess unlabeled methionine and cysteine (300 mg/liter, each) before cells were harvested at various time points. Cell lysates were immunoprecipitated using anti-iNOS antibody and protein A-Sepharose. Eluted proteins were separated by SDS-PAGE. Gels were dried for 3 h. Gel bands representing 35S-labeled iNOS were quantitated using a phosphorimager (17).
Immunofluorescence and microscopy. Cells were grown on glass coverslips coated with poly-D-lysine, fixed in 4% paraformaldehyde, permeabilized by 0.2% Triton X-100, and blocked in 10% normal goat serum. Primary antibody incubation was done at room temperature for 1 h, followed by a 30-min incubation at room temperature with Alexa Fluor-labeled secondary antibodies (Molecular Probes, Eugene, OR). Coverslips were mounted by the blue nuclear chromatin stain 4',6'-diamidino-2-phenylindole (DAPI; Molecular Probes) and viewed by using a Zeiss Axiovert microscope deconvolution microscopy system. Imaging was performed by using a Zeiss 100x (1.4 numerical aperture) oil immersion lens, and Z sections were collected at an optical depth of 0.25 µm. Images were optimized by using Zeiss deconvolution software (16).
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FIG. 1. Knockdown of endogenous CHIP increases iNOS cellular level. (A). HEK293 cells stably expressing iNOS were transfected for 72 h with a plasmid encoding either control shRNA having no perfect matches to any human gene or shRNA specific for CHIP. (B) RT4 cells were transduced with lentivirus encoding CHIP-specific shRNA or control shRNA. After 48 h, cells were incubated with gamma interferon (100 U/ml), interleukin-1β (0.5 ng/ml), and tumor necrosis factor alpha (10 ng/ml) for 24 h. In both panels, cells were lysed, and Western analysis was used to evaluate CHIP, iNOS, or GAPDH. iNOS activity was evaluated by measuring nitrite accumulation in the culture medium. Data represent mean ± standard deviation. n = 3 (A) or 4 (B). *, P < 0.05, compared to the control condition.
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-tubulin at the MTOC and did not associate with vimentin cage collapse (see Fig. S2 in the supplemental material). These two features are characteristic of mature aggresome formation (9, 14, 16).
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FIG. 2. Critical role for CHIP in iNOS aggresome formation. (A and B) HEK293 cells stably expressing iNOS-GFP were transfected for 72 h with plasmids expressing either control shRNA or shRNA specific for CHIP. Cells were incubated for 3 h in the presence of vehicle only (DMSO) (A) or a 10 µM concentration of the proteasome inhibitor MG132 (B). Cells were then fixed, stained with DAPI to visualize the nuclei (blue), immunostained with CHIP antibody, and examined by fluorescence microscopy. Arrows in panel B point to the mature iNOS aggresome. Graphs show quantitation of the percentage of cells expressing iNOS aggresome or preaggresome structures. (C to E) HEK293 cells were cotransfected with a plasmid encoding cDNA of human iNOS-GFP and with a plasmid containing vector as a control or Flag-tagged CHIP. The molar ratio of the iNOS plasmid to the coplasmid was 1:10. At 24 (C) or 48 (D and E) h after transfection, cells were examined by fluorescence microscopy. Quantitation of the percentage of cells expressing the iNOS aggresome is shown (C and D). CHIP-transfected cells exhibited larger iNOS aggresomes (E). Data represent mean ± standard deviation (n = 3). *, P < 0.05; **, P < 0.001 (compared to control condition). Scale bar, 10 µm.
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The above results suggested that CHIP was required for homing of iNOS preaggresomal structures to the MTOC to form the mature aggresome. In the absence of CHIP, there was an increase in iNOS preaggresomal structures, probably secondary to the combination of an increase in the iNOS steady-state level, as shown in Fig. 1, and a failure to transport iNOS to the MTOC. Knockdown of CHIP produced a remarkable arrest in iNOS aggresome formation and resulted in accumulation of preaggresomal structures, whereas overexpression of CHIP promoted iNOS aggresome formation. Overall, these data provide a glimpse into the cellular aggresome maturation process.
CHIP is required for aggresome formation by CFTR
F508.
The above data suggested that CHIP is required for iNOS aggresome formation, a prototype for a physiologic aggresome (16). We investigated whether CHIP might also be required for "pathological" aggresome formation caused by a misfolded protein such as CFTR
F508. As previously shown, CFTR
F508-GFP formed an aggresome in HEK293 cells (14). Interestingly, our data showed that CHIP colocalized with the CFTR
F508 aggresome (Fig. 3A). In striking parallel to the data shown above for the iNOS aggresome, knockdown of CHIP resulted in accumulation of CFTR
F508 preaggresomal structures that could not form a mature aggresome at the MTOC. As expected, proteasomal inhibition with MG132 accelerated CFTR
F508 aggresome formation. However, in cells deficient in CHIP, proteasomal inhibition failed to form a mature CFTR
508 aggresome (Fig. 3B; see also Fig. S4 in the supplemental material). These data strongly suggest that CHIP has a previously unrecognized critical role in iNOS and CFTR
508 aggresome formation and is required for homing of preaggresomal structures to the MTOC.
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FIG. 3. Knockdown of CHIP prevents aggresome formation by CFTR F508. HEK293 cells were transfected for 48 h with plasmids expressing either control shRNA or shRNA specific for CHIP. Cells were then transfected for 24 h with a plasmid expressing CFTR F508-GFP. Cells were incubated for 6 h in the presence of vehicle only (DMSO) (A) or a 10 µM concentration of the proteasome inhibitor MG132 (B). Cells were then fixed, stained with DAPI to visualize the nuclei (blue), immunostained with CHIP antibody, and examined by fluorescence microscopy. Arrows point to the mature CFTR F508 aggresome. Graphs show quantitation of the percentage of cells expressing CFTR F508 aggresome or preaggresome structures. Data represent mean ± standard deviation (n = 2). *, P < 0.05, compared to control condition. Scale bar, 10 µm.
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FIG. 4. Contributions of the chaperone binding domain and ubiquitin ligase domain to CHIP's role in cellular triage of iNOS. (A) Diagram and domain organization of CHIP. TPR-containing domain mediating interaction with chaperones (violet) and E3 ubiquitin ligase domain (green; U-box) are highlighted. The mutation sites of the chaperone binding-deficient mutant CHIP-K30A and the ubiquitin ligase-deficient mutant CHIP-H260Q are shown. HEK293 cells were transfected for 24 h with WT CHIP or CHIP mutants. Cells were lysed, and Western analysis was carried out to evaluate CHIP or GAPDH using His-tagged antibody or GAPDH antibody, respectively. (B) CHIP-H260Q mutant inactivates iNOS. HEK293 cells were cotransfected for 24 h with a plasmid encoding cDNA of human iNOS and with a plasmid containing control vector, WT His-CHIP, the His-CHIP-H260Q mutant, or the His-CHIP-K30A mutant. The molar ratio of the iNOS plasmid to the coplasmid was 1:5. iNOS activity was evaluated by measuring nitrite accumulation in culture medium (mean ± standard deviation; n = 6). (C) CHIP-H260Q mutant exhibits avid interaction with iNOS. HEK293 cells were cotransfected as in panel B except that the molar ratio of the iNOS plasmid to the coplasmid was 1:1. Twenty-four hours after transfection, cells were incubated with a 10 µM concentration of the proteasome inhibitor MG132 for 6 h and then lysed in NETN buffer. Cell lysates were subjected to immunoprecipitation (IP) with iNOS antibody or with His-tagged antibody. An aliquot of the immunoprecipitate was subjected to Western blotting with iNOS antibody or with His-tagged antibody. Immunoprecipitation with I B-β antibody was used as a negative control. Western analysis (lower panel) was done on cell lysates prior to immunoprecipitation. Protein loading was done in equal aliquots corresponding to 2.5% of the amount of proteins used for immunoprecipitation. (D) CHIP-H260Q mutant does not ubiquitinate iNOS. HEK293 cells were cotransfected as in panel B. At 24 h posttransfection, cells were incubated with 10 µM MG132 for 3 h and then lysed. Cell lysates were subjected to immunoprecipitation (IP) with an iNOS antibody. An aliquot of the immunoprecipitate was subjected to Western blotting (W) with ubiquitin (Ub) antibody. (E and F) HEK293 cells were cotransfected as in panel B. At 24 (E) or 48 (F) h after transfection, cells were lysed using 1% Triton X-100 as a detergent, and lysates were divided into Triton X-100-soluble (S) and Triton X-100-insoluble (IS) fractions. Equal aliquots of cell lysates (50 µg) were evaluated by Western blotting using antibodies against iNOS, CHIP, or GAPDH. *, P < 0.05; **, P < 0.001.
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B-β antibody was used as a negative control. When iNOS was immunoprecipitated from cell lysates, WT CHIP or the CHIP-H260Q mutant but not the CHIP-K30A mutant was coprecipitated (Fig. 4C). Similarly, when WT CHIP or CHIP-H260Q but not CHIP-K30A was immunoprecipitated, iNOS was coprecipitated. These data suggested that CHIP-K30A either did not interact with iNOS or that the interaction was weak and could not be detected. Thus, the chaperone binding activity of CHIP is important for the interaction of CHIP with iNOS. CHIP-K30A had a dramatically reduced affinity to HSP70 (Fig. 4C) and overexpression of WT CHIP or of either of the CHIP mutants (CHIP-H26Q or CHIP-K30A) did not, per se, affect the interaction of iNOS with HSP70 (Fig. 4C). Interestingly, the CHIP-H260Q mutant exhibited a stronger interaction with iNOS than WT CHIP. When iNOS was immunoprecipitated, CHIP-H260Q was more abundantly coprecipitated with iNOS than WT CHIP. This increased coprecipitation of iNOS occurred in spite of the CHIP-H260Q-induced reduction in iNOS level in the detergent-soluble fraction of cell lysates used for immunoprecipitation. In reciprocal experiments, when CHIP or CHIP mutants were immunoprecipitated, iNOS most abundantly coprecipitated with CHIP-H260Q. These data suggest that, in the absence of the ubiquitin ligase activity of CHIP, its interaction with iNOS either became stronger or lasted longer. Thus, the results imply that ubiquitination of the substrate by CHIP might be required for termination of the interaction between CHIP and the substrate. We then examined iNOS ubiquitination in cells cotransfected for 24 h with iNOS and with either WT CHIP, CHIP-H260Q, CHIP-K30A, or a control vector. The proteasome inhibitor MG132 was added to cell culture for 3 h before lysis. iNOS was then immunoprecipitated from cell lysates, and the immunoprecipitates were evaluated for the presence of ubiquitinated iNOS (Fig. 4D). Ubiquitinated iNOS was increased with the coexpression of CHIP, suggesting that CHIP promoted iNOS ubiquitination. Ubiquitinated iNOS was reduced in cells transfected with CHIP-H260Q. However, this reduction could be partially caused by the corresponding reduction of steady-state level of iNOS in these cells. Surprisingly, CHIP-K30A increased iNOS ubiquitination, albeit to a much less extent than WT CHIP. The increased ubiquitination of a substrate in the presence of the CHIP-K30A mutant has been previously reported but not fully explained (23). It is likely to be due a direct weak interaction between CHIP-K30A and its substrate, indicating that CHIP can have a direct chaperone-independent albeit weak interaction with some substrates, as recently suggested (22).
CHIP promotes iNOS sequestration to a detergent-resistant fraction. Because CHIP-H260Q could not ubiquitinate iNOS but still reduced iNOS in immunoprecipitation of detergent-soluble fraction of cell lysates (Fig. 4C), we hypothesized that CHIP-H260Q targeted iNOS to a detergent-resistant cellular fraction. We examined the effect of exogenous expression of CHIP mutants on iNOS levels in both detergent-soluble and insoluble fractions. We performed cotransfection experiments in HEK293 cells using iNOS cDNA combined with either that of CHIP, CHIP mutants, or a control vector. Cells were lysed 24 h or 48 h posttransfection using 1% Triton X-100 detergent-based buffer. Because aggresomes are partially Triton X-100 insoluble (11), lysates were divided into detergent-soluble and detergent-insoluble fractions. Western analysis of cell lysates revealed that reduction of iNOS steady-state levels by CHIP occurred in the detergent-soluble fraction (Fig. 4E). In contrast, CHIP caused an increase in iNOS in the detergent-resistant fraction, detected to a greater extent at 48 h posttransfection (Fig. 4F).
At 24 h posttransfection, the predominant effect of CHIP was to cause a reduction in iNOS in the detergent-soluble fraction, whereas at 48 h CHIP mainly caused an increase in iNOS in the detergent-resistant fraction. These data suggested that CHIP had two effects on iNOS. Initially, the main effect of CHIP seemed to be reduction of iNOS steady-state levels, possibly by targeting iNOS to proteasomal degradation. This early phase was followed by a later phase in which the main effect of CHIP was the sequestration of iNOS to a detergent-resistant fraction, possibly the aggresome. The CHIP-K30A mutant had no marked effect on iNOS steady-state levels (Fig. 4E and F). In contrast, the CHIP-H260Q mutant led to marked sequestration of iNOS to a detergent-resistant fraction. This effect was more pronounced than that of WT CHIP and could be detected earlier, at 24 h posttransfection. These data suggested that CHIP-H260Q has a dominant-negative effect on endogenous CHIP. It should be noted that although preaggresomes are distinct morphologically from mature aggresomes, both structures are detergent resistant. Thus, biochemical detection of iNOS in the detergent-resistant fraction cannot distinguish between iNOS in preaggresomes or in mature aggresomes.
CHIP promotes iNOS degradation by the proteasome. The above data demonstrated that CHIP interacted with iNOS and promoted its ubiquitination and that CHIP transfection led to an initial reduction of the iNOS level in the detergent-soluble fraction, followed by a later prominent increase in iNOS in the detergent-resistant fraction. To determine if the initial reduction of iNOS by CHIP was caused by targeting iNOS to proteasomal degradation, we studied the effects of CHIP on the iNOS half-life in the presence or absence of proteasomal inhibitors. The half-life of iNOS, measured by pulse-chase analysis in cells cotransfected with CHIP, was significantly shorter than that of iNOS cotransfected with a control vector (1.2 ± 0.6 h versus 2.7 ± 0.2 h, respectively) (Fig. 5A) (P < 0.05). It should be noted that because cells have to be labeled for 1 h to generate a strong, labeled iNOS signal and because the iNOS half-life is relatively short, some degradation occurs during the labeling period. Evidence of enhanced degradation of iNOS by CHIP during the labeling period can be deduced from the reduction of the iNOS level in cells cotransfected with CHIP at the 0-h time point (Fig. 5). However, this phenomenon has no effect on the iNOS half-life calculation because the 0-h time point is used as a reference of 100% value. Parallel experiments were performed in the presence of the proteasome inhibitor MG132. As previously shown, proteasomal inhibition prolonged the iNOS half-life but did not completely block iNOS decay (Fig. 5B) (17). Nevertheless, proteasomal inhibition was able to rescue most but not all of the iNOS half-life reduction induced by CHIP. Because the aggresome is partially detergent resistant and thus is not readily available for the immunoprecipitation used in the half-life determination (11), some of the apparent half-life decay is due to aggresome sequestration that could not be rescued by proteasomal inhibition.
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FIG. 5. CHIP promotes iNOS proteasomal degradation. HEK293 cells were cotransfected with human iNOS cDNA and with either a control vector or with CHIP in a 1:5 molar ratio. At 24 h posttransfection, cells were pulsed with [35S]methionine-cysteine for 1 h and chased with unlabeled medium at various time points in the absence (A) or the presence (B) of a 10 µM concentration of the proteasome inhibitor MG132. iNOS was immunoprecipitated with iNOS antibody, eluted, and analyzed by SDS-PAGE. Bands representing 35S-labeled iNOS were quantitated to calculate the iNOS half-life. Data represent means ± standard deviations (n = 3). *, P < 0.05.
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FIG. 6. CHIP colocalizes with iNOS aggresome. (A) HEK293 cells were cotransfected with a plasmid encoding the cDNA of iNOS-GFP and with a plasmid containing a vector as a control or Flag-tagged CHIP. The molar ratio of the iNOS plasmid to the coplasmid was 1:10. Forty eight hours after transfection, cells were fixed and examined by fluorescence microscopy. Exogenously expressed CHIP colocalized with cytosolic iNOS (row i) and translocated with iNOS to the aggresome (row ii). iNOS aggresomes in CHIP-transfected cells were ubiquitin enriched (row iii). (B) Endogenous CHIP colocalized with the iNOS aggresome in primary airway epithelial cells cultured at the air-liquid interphase (row i), in RT4 cells (row ii), and in HEK293 cells (row iii). Primary cells and RT4 cells expressed iNOS following cytokine stimulation, whereas HEK293 cells stably expressed iNOS-GFP. Scale bar, 10 µm.
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CHIP's ubiquitin ligase activity is required for CHIP's role in aggresome formation. We studied the effect of CHIP mutants, following their cotransfection with iNOS in HEK293 cells, on iNOS aggresome formation. WT CHIP markedly increased the number of cells with iNOS aggresomes (Fig. 7). Although CHIP-K30A induced iNOS aggresomes to a much lesser extent than WT CHIP, the effect was still significant (Fig. 7, graph). This finding is consistent with the CHIP-K30A effect on iNOS ubiquitination (Fig. 4D) in that both results imply a weak but direct interaction between CHIP and iNOS, independent of chaperone binding.
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FIG. 7. Ubiquitin ligase activity of CHIP is required for aggresome formation. HEK293 cells were cotransfected with a plasmid encoding the cDNA of human iNOS and with either a plasmid encoding WT CHIP (row i) or CHIP-H260Q. The molar ratio of the iNOS plasmid to the coplasmid was 1:5. Forty-eight hours after transfection, cells were fixed and immunostained with antibodies against His-tagged CHIP, ubiquitin, or -tubulin. Graphs show quantitation of the percentage of cells expressing iNOS aggresome and preaggresome structures. Data represent means ± standard deviations (n = 3). *, P < 0.05; **, P < 0.001 (compared to control condition). Scale bar, 10 µm.
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-tubulin at the MTOC (Fig. 7, row iv). These data confirm and shed more light on the biochemical data shown in Fig. 4. Both biochemical and microscopy data suggest that CHIP-H260Q binds to iNOS, but because of lack of ubiquitin ligase activity there is a failure to release iNOS to the aggresome.
The above data suggested that CHIP ubiquitin ligase activity is required for its role in aggresome formation. To study the underlying mechanisms for failure of preaggresomal structures to form mature aggresomes in CHIP-deficient cells, we evaluated preaggresomal structures for the presence of ubiquitinated proteins. In HEK293 cells expressing iNOS-GFP, the iNOS aggresome was enriched in ubiquitin (Fig. 8A). In contrast, knockdown of CHIP in these cells resulted in formation of preaggresomal structures that were ubiquitin negative. These data suggest that CHIP-induced ubiquitination of iNOS is an important mechanism for iNOS aggresome formation. To further confirm these mechanistic observations, we studied the effect of CHIP knockdown on the formation of aggresomes by GFP-250, a cytosolic protein chimera. This protein is not ubiquitinated and is thus considered a prototype for the formation of aggresomes by nonubiquinated proteins (9, 15). Interestingly, in contrast to effect of CHIP on aggresomes formed by iNOS and CFTR
F508, knockdown of CHIP had no effect on aggresome formation by GFP-250 (Fig. 8B).
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FIG. 8. Ubiquitin ligase activity is required for CHIP's role in aggresome formation. HEK293 cells were transfected for 48 h with lentivirus expressing either control shRNA or shRNA specific for CHIP. Cells were then transfected for 24 h with plasmids expressing either iNOS-GFP (A) or GFP-250 (B) and incubated for 3 h in the presence of a 10 µM concentration of the proteasome inhibitor MG132. Cells were then immunostained with ubiquitin or CHIP antibodies. Scale bar, 10 µm.
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FIG. 9. Disruption of dynein-dependent microtubular transport leads to accumulation of preaggresomal structures and prevents iNOS aggresome formation. HEK293 cells stably expressing iNOS-GFP were fixed and analyzed by fluorescence microscopy. (A) Cells were pretreated with DMSO (vehicle) or 1 µM nocodazole for 1 h, followed by either vehicle or 1 µM nocodazole plus 10 µM MG132 for 3 h. (B) Experiments were done as in panel A, except that 1 mM EHNA was used instead of nocodazole. (C) Cells were transfected with control vector or Flag-tagged p50. Twenty-four hours after transfection, cells were treated with 10 µM MG132 for 4 h, fixed, and immunostained with flag antibody.
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FIG. 10. CHIP promotes HDAC6-mediated iNOS aggresome formation. (A) CHIP increases the association of iNOS with HDAC6. HEK293 cells were cotransfected for 24 h with a plasmid encoding iNOS and with a plasmid containing control vector, WT CHIP, the CHIP-H260Q mutant, or the CHIP-K30A mutant. The molar ratio of the iNOS plasmid to the coplasmid was 1:1. Coimmunoprecipitation was carried out on cell lysates using antibodies against iNOS or HDAC6. Immunoprecipitated proteins were analyzed by Western blotting for the presence of iNOS or HDAC6. Immunoprecipitation (IP) with irrelevant antibody (I B-β) was used as a negative control. Western analysis (lower panel) of cell lysates was done prior to immunoprecipitation using equal aliquots corresponding to 2.5% of amount of proteins used for immunoprecipitation. (B) Knockdown of CHIP decreases the interaction of iNOS and HDAC6. HEK293 cells were transduced for 48 h with lentiviral vector expressing either control shRNA or CHIP shRNA and then transfected with iNOS cDNA for 24 h. Coimmunoprecipitation (IP) and Western analysis were done as described in panel A. (C) HDAC6 colocalizes with the iNOS aggresome but not with cytosolic iNOS or preaggresomal structures caused by CHIP-H260Q. (i) HEK293 cells stably expressing iNOS-GFP without aggresome formation. (ii) Cells exhibiting iNOS aggresome following MG132 treatment. (iii) Cells with iNOS aggresome promoted by overexpression of WT-CHIP. (iv) Cells with iNOS preaggresomal structures promoted by overexpression of CHIP-H260Q. (D) Knockdown of HDAC6 prevents iNOS aggresome formation. HEK293 cells stably expressing iNOS-GFP were transfected with vector encoding control shRNA or shRNA specific for HDAC6 for 3 days followed by another 3-day transfection with the same vectors to ensure knockdown of HDAC6. Western analysis of cell lysates was performed with antibodies against HDAC6, iNOS, acetylated tubulin, or tubulin (upper panel). Cells were treated with 10 µM MG132 for 10 h, fixed, and analyzed by immunofluorescence with HDAC6 antibody (middle panel). The graph shows quantitation of the percentage of cells expressing iNOS aggresome or preaggresome structures. Data represent means ± standard deviations (n = 3). *, P < 0.05. Scale bar, 10 µm.
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-tubulin but had no effect on the level of iNOS or
-tubulin (Fig. 10D, upper panel). Cells were then treated with vehicle or MG132 for 10 h and evaluated by fluorescence microscopy. Cells transfected with control shRNA formed iNOS aggresomes and HDAC6 colocalized with iNOS aggresomes. In contrast, knockdown of HDAC6 prevented iNOS aggresome formation, and iNOS was sequestrated in preaggresome structures (Fig. 10D). These data suggest that HDAC6 is required for iNOS aggresome formation and that CHIP's role in promoting iNOS aggresome formation is mediated by HDAC6. Our data suggested that CHIP initially triaged iNOS to the proteasome and then to the aggresome. We hypothesized that the switch from proteasomal degradation to aggresomal sequestration could be triggered by an overwhelmed proteasomal capacity caused indirectly by CHIP's targeting proteins to the proteasome. We therefore investigated if cotransfection of cells with iNOS and CHIP would result in proteasomal overload, coincident with the increase in aggresome formation observed above. To test this hypothesis, we used HEK293 cells stably expressing GFP-u, an unstable version of GFP that is rapidly degraded and thus can only be detected when the proteasome degradation capacity is reduced, e.g., with MG132 (see Fig. S5A in the supplemental material) (5). Cells were cotransfected with cDNAs of iNOS and with either CHIP or a control vector. At 24 h following transfection, GFP-u was not visible, consistent with its rapid degradation (see Fig. S5B in the supplemental material). However, at 48 h posttransfection, GFP-u accumulated in cells cotransfected with both CHIP and iNOS but not in cells transfected with iNOS and vector only.
Our data suggest that ubiquitination of iNOS by CHIP is required not only for targeting iNOS for proteasomal degradation but also for targeting iNOS to aggresome sequestration. Further, HDAC6 acts as an adaptor to anchor ubiquitinated iNOS to the dynein motor for transport to the MTOC. Disruption of preaggresome transport to the aggresome was experimentally produced by CHIP knockdown, HDAC6 knockdown, overexpression of the CHIP-H260Q mutant, or by general inhibition of the dynein microtubular transport. The resulting cellular phenotypes under all of the above conditions were quite similar and showed accumulation of preaggresomal structures that fail to reach the MTOC. The common underlying mechanism is a failure in one of the steps to ubiquitinate iNOS, load iNOS to the dynein motor, or transport iNOS to the MTOC.
Taken together, our data suggest a model in which CHIP is an effector for both proteasomal degradation and aggresomal sequestration (Fig. 11). The CHIP interaction with iNOS is mediated by CHIP's chaperone-binding domain. CHIP's U-box domain recruits the E2 ubiquitin conjugation enzyme and ubiquitinates iNOS. Ubiquitinated iNOS is targeted for proteasomal degradation and to aggresome sequestration. This mechanism is accelerated by proteasomal inhibition. CHIP-induced iNOS ubiquitination promotes association of iNOS to HDAC6, which serves as a linker between ubiquitinated iNOS and the dynein motor. Dynein motor-dependent microtubular transport moves iNOS to the aggresome.
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FIG. 11. Model for CHIP regulation of iNOS degradation and aggresome formation. CHIP interaction with iNOS is mediated by CHIP's chaperone-binding domain. CHIP's U-box domain recruits the E2 ubiquitin conjugation enzyme and ubiquitinates iNOS. Ubiquitinated iNOS is targeted for proteasomal degradation and to aggresome sequestration. The latter mechanism is accelerated by proteasomal inhibition. CHIP-induced iNOS ubiquitination promotes association of iNOS to HDAC6, which serves as a linker between ubiquitinated iNOS and the dynein motor. Dynein motor-dependent microtubular transport moves iNOS to the aggresome.
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We thank Li-Yuan Yu-Lee, Bruce Stanton, and Len Neckers for providing vectors for p50, CFTR
F508-GFP and CHIP mutants, respectively. We thank members of the Eissa laboratory, particularly Katarzyna Kolodziejska and Abuduaini Abulimiti, for useful suggestions. We thank Margie Moczygemba, Li-Yuan Yu-Lee, and Francis Tsai for useful discussions and critical review of the manuscript.
Published ahead of print on 27 October 2008. ![]()
Supplemental material for this article may be found at http://mcb.asm.org/. ![]()
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