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Mol. Cell. Biol., 07 1997, 3786-3798, Vol 17, No. 7
F Pessler, PS Pendergrast and N Hernandez
The human immunodeficiency virus (HIV-1) promoter directs the synthesis of
two classes of RNA molecules, short transcripts and full-length
transcripts. The synthesis of short transcripts depends on a bipartite DNA
element, the inducer of short transcripts (IST), located in large part
downstream of the HIV-1 start site of transcription. IST does not require
any viral product for function and is thought to direct the assembly of
transcription complexes that are incapable of efficient elongation. Nothing
is known, however, about the biochemical mechanisms that mediate IST
function. Here, we report the identification and purification of a factor
that binds specifically to the IST. This factor, FBI-1, recognizes a large
bipartite binding site that coincides with the bipartite IST element. It is
constituted at least in part by an 86-kDa polypeptide that can be
specifically cross-linked to IST. FBI- 1 also binds to promoter and
attenuation regions of a number of cellular and viral transcription units
that are regulated by a transcription elongation block. This observation,
together with the observation that the binding of FBI-1 to IST mutants
correlates with the ability of these mutants to direct IST function,
suggests that FBI- 1 may be involved in the establishment of abortive
transcription complexes.
Copyright © 1997, American Society for Microbiology
Purification and characterization of FBI-1, a cellular factor that binds to the human immunodeficiency virus type 1 inducer of short transcripts
Cold Spring Harbor Laboratory, New York 11724, USA.
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