Previous Article | Next Article 
Molecular and Cellular Biology, March 1999, p. 2088-2097, Vol. 19, No. 3
0270-7306/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Stable Remodeling of Tailless Nucleosomes by the
Human SWI-SNF Complex
Jeffrey R.
Guyon,1,2,3
Geeta J.
Narlikar,1,2
Saïd
Sif,1,2 and
Robert E.
Kingston1,2,*
Department of Molecular Biology,
Massachusetts General Hospital, Boston, Massachusetts
021141; Department of Genetics, Harvard
Medical School, Boston, Massachusetts 021152;
and Graduate Program, Department of Chemistry and
Biochemistry, University of Notre Dame, Notre Dame, Indiana
465563
Received 19 August 1998/Returned for modification 8 October
1998/Accepted 13 December 1998
The histone N-terminal tails have been shown previously to be
important for chromatin assembly, remodeling, and stability. We have
tested the ability of human SWI-SNF (hSWI-SNF) to remodel nucleosomes
whose tails have been cleaved through a limited trypsin digestion. We
show that hSWI-SNF is able to remodel tailless mononucleosomes and
nucleosomal arrays, although hSWI-SNF remodeling of tailless nucleosomes is less effective than remodeling of nucleosomes with tails. Analogous to previous observations with tailed nucleosomal templates, we show both (i) that hSWI-SNF-remodeled trypsinized mononucleosomes and arrays are stable for 30 min in the remodeled conformation after removal of ATP and (ii) that the remodeled tailless
mononucleosome can be isolated on a nondenaturing acrylamide gel as a
novel species. Thus, nucleosome remodeling by hSWI-SNF can occur via
interactions with a tailless nucleosome core.
*
Corresponding author. Mailing address: Department of
Molecular Biology, Wellman 10, Massachusetts General Hospital, Boston, MA 02114. Phone: (617) 726-5990. Fax: (617) 726-5949. E-mail: kingston{at}frodo.mgh.harvard.edu.

This paper is dedicated to Veronica Blasquez in remembrance of her
guidance, encouragement, and
friendship.
Molecular and Cellular Biology, March 1999, p. 2088-2097, Vol. 19, No. 3
0270-7306/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
This article has been cited by other articles:
-
Juelich, T., Sutcliffe, E., Denton, A., He, Y., Doherty, P. C., Parish, C., Turner, S. J., Tremethick, D., Rao, S.
(2009). Interplay between Chromatin Remodeling and Epigenetic Changes during Lineage-Specific Commitment to Granzyme B Expression. J. Immunol.
183: 7063-7072
[Abstract]
[Full Text]
-
Bouazoune, K., Miranda, T. B., Jones, P. A., Kingston, R. E.
(2009). Analysis of individual remodeled nucleosomes reveals decreased histone-DNA contacts created by hSWI/SNF. Nucleic Acids Res
37: 5279-5294
[Abstract]
[Full Text]
-
Macfarlan, T., Kutney, S., Altman, B., Montross, R., Yu, J., Chakravarti, D.
(2005). Human THAP7 Is a Chromatin-associated, Histone Tail-binding Protein That Represses Transcription via Recruitment of HDAC3 and Nuclear Hormone Receptor Corepressor. J. Biol. Chem.
280: 7346-7358
[Abstract]
[Full Text]
-
Patenge, N., Elkin, S. K., Oettinger, M. A.
(2004). ATP-dependent Remodeling by SWI/SNF and ISWI Proteins Stimulates V(D)J Cleavage of 5 S Arrays. J. Biol. Chem.
279: 35360-35367
[Abstract]
[Full Text]
-
Citterio, E., Papait, R., Nicassio, F., Vecchi, M., Gomiero, P., Mantovani, R., Di Fiore, P. P., Bonapace, I. M.
(2004). Np95 Is a Histone-Binding Protein Endowed with Ubiquitin Ligase Activity. Mol. Cell. Biol.
24: 2526-2535
[Abstract]
[Full Text]
-
FAN, H.-Y., NARLIKAR, G.J., KINGSTON, R.E.
(2004). Noncovalent Modification of Chromatin: Different Remodeled Products with Different ATPase Domains. Cold Spring Harb Symp Quant Biol
69: 183-192
[Abstract]
-
Flaus, A., Owen-Hughes, T.
(2003). Dynamic Properties of Nucleosomes during Thermal and ATP-Driven Mobilization. Mol. Cell. Biol.
23: 7767-7779
[Abstract]
[Full Text]
-
Gaillard, H., Fitzgerald, D. J., Smith, C. L., Peterson, C. L., Richmond, T. J., Thoma, F.
(2003). Chromatin Remodeling Activities Act on UV-damaged Nucleosomes and Modulate DNA Damage Accessibility to Photolyase. J. Biol. Chem.
278: 17655-17663
[Abstract]
[Full Text]
-
Kassabov, S. R., Henry, N. M., Zofall, M., Tsukiyama, T., Bartholomew, B.
(2002). High-Resolution Mapping of Changes in Histone-DNA Contacts of Nucleosomes Remodeled by ISW2. Mol. Cell. Biol.
22: 7524-7534
[Abstract]
[Full Text]
-
Sullivan, E. K., Weirich, C. S., Guyon, J. R., Sif, S., Kingston, R. E.
(2001). Transcriptional Activation Domains of Human Heat Shock Factor 1 Recruit Human SWI/SNF. Mol. Cell. Biol.
21: 5826-5837
[Abstract]
[Full Text]
-
Guyon, J. R., Narlikar, G. J., Sullivan, E. K., Kingston, R. E.
(2001). Stability of a Human SWI-SNF Remodeled Nucleosomal Array. Mol. Cell. Biol.
21: 1132-1144
[Abstract]
[Full Text]
-
Clapier, C. R., Längst, G., Corona, D. F. V., Becker, P. B., Nightingale, K. P.
(2001). Critical Role for the Histone H4 N Terminus in Nucleosome Remodeling by ISWI. Mol. Cell. Biol.
21: 875-883
[Abstract]
[Full Text]
-
Citterio, E., Van Den Boom, V., Schnitzler, G., Kanaar, R., Bonte, E., Kingston, R. E., Hoeijmakers, J. H. J., Vermeulen, W.
(2000). ATP-Dependent Chromatin Remodeling by the Cockayne Syndrome B DNA Repair-Transcription-Coupling Factor. Mol. Cell. Biol.
20: 7643-7653
[Abstract]
[Full Text]
-
Jaskelioff, M., M. Gavin, I., Peterson, C. L., Logie, C.
(2000). SWI-SNF-Mediated Nucleosome Remodeling: Role of Histone Octamer Mobility in the Persistence of the Remodeled State. Mol. Cell. Biol.
20: 3058-3068
[Abstract]
[Full Text]
-
Kal, A. J., Mahmoudi, T., Zak, N. B., Verrijzer, C. P.
(2000). The Drosophila Brahma complex is an essential coactivator for the trithorax group protein Zeste. Genes Dev.
14: 1058-1071
[Abstract]
[Full Text]
-
Vignali, M., Hassan, A. H., Neely, K. E., Workman, J. L.
(2000). ATP-Dependent Chromatin-Remodeling Complexes. Mol. Cell. Biol.
20: 1899-1910
[Full Text]
-
Kingston, R. E., Narlikar, G. J.
(1999). ATP-dependent remodeling and acetylation as regulators of chromatin fluidity. Genes Dev.
13: 2339-2352
[Full Text]
-
Boyer, L. A., Logie, C., Bonte, E., Becker, P. B., Wade, P. A., Wolffe, A. P., Wu, C., Imbalzano, A. N., Peterson, C. L.
(2000). Functional Delineation of Three Groups of the ATP-dependent Family of Chromatin Remodeling Enzymes. J. Biol. Chem.
275: 18864-18870
[Abstract]
[Full Text]
-
Sengupta, S. M., VanKanegan, M., Persinger, J., Logie, C., Cairns, B. R., Peterson, C. L., Bartholomew, B.
(2001). The Interactions of Yeast SWI/SNF and RSC with the Nucleosome before and after Chromatin Remodeling. J. Biol. Chem.
276: 12636-12644
[Abstract]
[Full Text]
-
Aalfs, J. D., Narlikar, G. J., Kingston, R. E.
(2001). Functional Differences between the Human ATP-dependent Nucleosome Remodeling Proteins BRG1 and SNF2H. J. Biol. Chem.
276: 34270-34278
[Abstract]
[Full Text]