This Article
Right arrow Full Text
Right arrow Full Text (PDF)
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrowReprints and Permissions
Right arrow Copyright Information
Right arrow Books from ASM Press
Right arrow MicrobeWorld
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Takagaki, Y.
Right arrow Articles by Manley, J. L.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Takagaki, Y.
Right arrow Articles by Manley, J. L.

 Previous Article  |  Next Article 

Molecular and Cellular Biology, March 2000, p. 1515-1525, Vol. 20, No. 5
0270-7306/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.

Complex Protein Interactions within the Human Polyadenylation Machinery Identify a Novel Component

Yoshio Takagakidagger and James L. Manley*

Department of Biological Sciences, Columbia University, New York, New York 10027

Received 29 October 1999/Accepted 29 November 1999

Polyadenylation of mRNA precursors is a two-step reaction requiring multiple protein factors. Cleavage stimulation factor (CstF) is a heterotrimer necessary for the first step, endonucleolytic cleavage, and it plays an important role in determining the efficiency of polyadenylation. Although a considerable amount is known about the RNA binding properties of CstF, the protein-protein interactions required for its assembly and function are poorly understood. We therefore first identified regions of the CstF subunits, CstF-77, CstF-64, and CstF-50, required for interaction with each other. Unexpectedly, small regions of two of the subunits participate in multiple interactions. In CstF-77, a proline-rich domain is necessary not only for binding both other subunits but also for self-association, an interaction consistent with genetic studies in Drosophila. In CstF-64, a small region, highly conserved in metazoa, is responsible for interactions with two proteins, CstF-77 and symplekin, a nuclear protein of previously unknown function. Intriguingly, symplekin has significant similarity to a yeast protein, PTA1, that is a component of the yeast polyadenylation machinery. We show that multiple factors, including CstF, cleavage-polyadenylation specificity factor, and symplekin, can be isolated from cells as part of a large complex. These and other data suggest that symplekin may function in assembly of the polyadenylation machinery.


* Corresponding author. Mailing address: Department of Biological Sciences, Columbia University, New York, NY 10027. Phone: (212) 854-4647. Fax: (212) 865-8246. E-mail: jlm2{at}columbia.edu.

dagger Present address: Division of Rheumatology and Immunology, Department of Internal Medicine, University of Virginia School of Medicine, Charlottesville, VA 22908.


Molecular and Cellular Biology, March 2000, p. 1515-1525, Vol. 20, No. 5
0270-7306/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.



This article has been cited by other articles:

  • McCrea, P. D., Gu, D., Balda, M. S. (2009). Junctional Music that the Nucleus Hears: Cell-Cell Contact Signaling and the Modulation of Gene Activity. Cold Spring Harb. Perspect. Biol. 1: a002923-a002923 [Abstract] [Full Text]  
  • Jang, Y. H., Park, H.-Y., Kim, S.-K., Lee, J. H., Suh, M. C., Chung, Y. S., Paek, K.-H., Kim, J.-K. (2009). Survey of Rice Proteins Interacting With OsFCA and OsFY Proteins Which Are Homologous to the Arabidopsis Flowering Time Proteins, FCA and FY. Plant Cell Physiol 50: 1479-1492 [Abstract] [Full Text]  
  • Richard, P., Manley, J. L. (2009). Transcription termination by nuclear RNA polymerases. Genes Dev. 23: 1247-1269 [Abstract] [Full Text]  
  • Ghazy, M. A., He, X., Singh, B. N., Hampsey, M., Moore, C. (2009). The Essential N Terminus of the Pta1 Scaffold Protein Is Required for snoRNA Transcription Termination and Ssu72 Function but Is Dispensable for Pre-mRNA 3'-End Processing. Mol. Cell. Biol. 29: 2296-2307 [Abstract] [Full Text]  
  • Sullivan, K. D., Mullen, T. E., Marzluff, W. F., Wagner, E. J. (2009). Knockdown of SLBP results in nuclear retention of histone mRNA. RNA 15: 459-472 [Abstract] [Full Text]  
  • Rozenblatt-Rosen, O., Nagaike, T., Francis, J. M., Kaneko, S., Glatt, K. A., Hughes, C. M., LaFramboise, T., Manley, J. L., Meyerson, M. (2009). The tumor suppressor Cdc73 functionally associates with CPSF and CstF 3' mRNA processing factors. Proc. Natl. Acad. Sci. USA 106: 755-760 [Abstract] [Full Text]  
  • Yang, X.-c., Sullivan, K. D., Marzluff, W. F., Dominski, Z. (2009). Studies of the 5' Exonuclease and Endonuclease Activities of CPSF-73 in Histone Pre-mRNA Processing. Mol. Cell. Biol. 29: 31-42 [Abstract] [Full Text]  
  • Lee, S.-H., Choi, H.-S., Kim, H., Lee, Y. (2008). ERK is a novel regulatory kinase for poly(A) polymerase. Nucleic Acids Res 36: 803-813 [Abstract] [Full Text]  
  • Davila Lopez, M., Samuelsson, T. (2008). Early evolution of histone mRNA 3' end processing. RNA 14: 1-10 [Abstract] [Full Text]  
  • Mullen, T. E., Marzluff, W. F. (2008). Degradation of histone mRNA requires oligouridylation followed by decapping and simultaneous degradation of the mRNA both 5' to 3' and 3' to 5'. Genes Dev. 22: 50-65 [Abstract] [Full Text]  
  • Vethantham, V., Rao, N., Manley, J. L. (2007). Sumoylation Modulates the Assembly and Activity of the Pre-mRNA 3' Processing Complex. Mol. Cell. Biol. 27: 8848-8858 [Abstract] [Full Text]  
  • Kim, J. H., Richter, J. D. (2007). RINGO/cdk1 and CPEB mediate poly(A) tail stabilization and translational regulation by ePAB. Genes Dev. 21: 2571-2579 [Abstract] [Full Text]  
  • Legrand, P., Pinaud, N., Minvielle-Sebastia, L., Fribourg, S. (2007). The structure of the CstF-77 homodimer provides insights into CstF assembly. Nucleic Acids Res 35: 4515-4522 [Abstract] [Full Text]  
  • Cline, E. G., Nelson, W. J. (2007). Characterization of Mammalian Par 6 as a Dual-Location Protein. Mol. Cell. Biol. 27: 4431-4443 [Abstract] [Full Text]  
  • Matter, K., Balda, M. S. (2007). Epithelial tight junctions, gene expression and nucleo-junctional interplay. J. Cell Sci. 120: 1505-1511 [Abstract] [Full Text]  
  • Qu, X., Perez-Canadillas, J.-M., Agrawal, S., De Baecke, J., Cheng, H., Varani, G., Moore, C. (2007). The C-terminal Domains of Vertebrate CstF-64 and Its Yeast Orthologue Rna15 Form a New Structure Critical for mRNA 3'-End Processing. J. Biol. Chem. 282: 2101-2115 [Abstract] [Full Text]  
  • Kavanagh, E., Buchert, M., Tsapara, A., Choquet, A., Balda, M. S., Hollande, F., Matter, K. (2006). Functional interaction between the ZO-1-interacting transcription factor ZONAB/DbpA and the RNA processing factor symplekin. J. Cell Sci. 119: 5098-5105 [Abstract] [Full Text]  
  • Rouget, C., Papin, C., Mandart, E. (2006). Cytoplasmic CstF-77 Protein Belongs to a Masking Complex with Cytoplasmic Polyadenylation Element-binding Protein in Xenopus Oocytes. J. Biol. Chem. 281: 28687-28698 [Abstract] [Full Text]  
  • Wagner, E. J., Marzluff, W. F. (2006). ZFP100, a Component of the Active U7 snRNP Limiting for Histone Pre-mRNA Processing, Is Required for Entry into S Phase.. Mol. Cell. Biol. 26: 6702-6712 [Abstract] [Full Text]  
  • Nag, A., Narsinh, K., Kazerouninia, A., Martinson, H. G. (2006). The conserved AAUAAA hexamer of the poly(A) signal can act alone to trigger a stable decrease in RNA polymerase II transcription velocity. RNA 12: 1534-1544 [Abstract] [Full Text]  
  • ZHELKOVSKY, A., TACAHASHI, Y., NASSER, T., HE, X., STERZER, U., JENSEN, T. H., DOMDEY, H., MOORE, C. (2006). The role of the Brr5/Ysh1 C-terminal domain and its homolog Syc1 in mRNA 3'-end processing in Saccharomyces cerevisiae. RNA 12: 435-445 [Abstract] [Full Text]  
  • Forbes, K. P., Addepalli, B., Hunt, A. G. (2006). An Arabidopsis Fip1 Homolog Interacts with RNA and Provides Conceptual Links with a Number of Other Polyadenylation Factor Subunits. J. Biol. Chem. 281: 176-186 [Abstract] [Full Text]  
  • Gilmartin, G. M. (2005). Eukaryotic mRNA 3' processing: a common means to different ends. Genes Dev. 19: 2517-2521 [Full Text]  
  • Kolev, N. G., Steitz, J. A. (2005). Symplekin and multiple other polyadenylation factors participate in 3'-end maturation of histone mRNAs. Genes Dev. 19: 2583-2592 [Abstract] [Full Text]  
  • Gocke, C. B., Yu, H., Kang, J. (2005). Systematic Identification and Analysis of Mammalian Small Ubiquitin-like Modifier Substrates. J. Biol. Chem. 280: 5004-5012 [Abstract] [Full Text]  
  • St-Pierre, B., Liu, X., Kha, L.-C. T., Zhu, X., Ryan, O., Jiang, Z., Zacksenhaus, E. (2005). Conserved and specific functions of mammalian ssu72. Nucleic Acids Res 33: 464-477 [Abstract] [Full Text]  
  • Cereijido, M., Contreras, R. G., Shoshani, L. (2004). Cell Adhesion, Polarity, and Epithelia in the Dawn of Metazoans. Physiol. Rev. 84: 1229-1262 [Abstract] [Full Text]  
  • Dettwiler, S., Aringhieri, C., Cardinale, S., Keller, W., Barabino, S. M. L. (2004). Distinct Sequence Motifs within the 68-kDa Subunit of Cleavage Factor Im Mediate RNA Binding, Protein-Protein Interactions, and Subcellular Localization. J. Biol. Chem. 279: 35788-35797 [Abstract] [Full Text]  
  • Schneeberger, E. E., Lynch, R. D. (2004). The tight junction: a multifunctional complex. Am. J. Physiol. Cell Physiol. 286: C1213-C1228 [Abstract] [Full Text]  
  • Park, N. J., Tsao, D. C., Martinson, H. G. (2004). The Two Steps of Poly(A)-Dependent Termination, Pausing and Release, Can Be Uncoupled by Truncation of the RNA Polymerase II Carboxyl-Terminal Repeat Domain. Mol. Cell. Biol. 24: 4092-4103 [Abstract] [Full Text]  
  • RYAN, K., CALVO, O., MANLEY, J. L. (2004). Evidence that polyadenylation factor CPSF-73 is the mRNA 3' processing endonuclease. RNA 10: 565-573 [Abstract] [Full Text]  
  • Xing, H., Mayhew, C. N., Cullen, K. E., Park-Sarge, O.-K., Sarge, K. D. (2004). HSF1 Modulation of Hsp70 mRNA Polyadenylation via Interaction with Symplekin. J. Biol. Chem. 279: 10551-10555 [Abstract] [Full Text]  
  • Kim, S. J., Martinson, H. G. (2003). Poly(A)-dependent Transcription Termination: CONTINUED COMMUNICATION OF THE POLY(A) SIGNAL WITH THE POLYMERASE IS REQUIRED LONG AFTER EXTRUSION IN VIVO. J. Biol. Chem. 278: 41691-41701 [Abstract] [Full Text]  
  • Li, C., Lin, R.-I., Lai, M.-C., Ouyang, P., Tarn, W.-Y. (2003). Nuclear Pnn/DRS Protein Binds to Spliced mRNPs and Participates in mRNA Processing and Export via Interaction with RNPS1. Mol. Cell. Biol. 23: 7363-7376 [Abstract] [Full Text]  
  • MACMORRIS, M., BROCKER, C., BLUMENTHAL, T. (2003). UAP56 levels affect viability and mRNA export in Caenorhabditis elegans. RNA 9: 847-857 [Abstract] [Full Text]  
  • Calvo, O., Manley, J. L. (2003). Strange bedfellows: polyadenylation factors at the promoter. Genes Dev. 17: 1321-1327 [Full Text]  
  • Benoit, B., Juge, F., Iral, F., Audibert, A., Simonelig, M. (2002). Chimeric human CstF-77/Drosophila Suppressor of forked proteins rescue suppressor of forked mutant lethality and mRNA 3' end processing in Drosophila. Proc. Natl. Acad. Sci. USA 99: 10593-10598 [Abstract] [Full Text]  
  • Hofmann, I., Schnolzer, M., Kaufmann, I., Franke, W. W. (2002). Symplekin, a Constitutive Protein of Karyo- and Cytoplasmic Particles Involved in mRNA Biogenesis in Xenopus laevis Oocytes. Mol. Biol. Cell 13: 1665-1676 [Abstract] [Full Text]  
  • Vo, L. T. A., Minet, M., Schmitter, J.-M., Lacroute, F., Wyers, F. (2001). Mpe1, a Zinc Knuckle Protein, Is an Essential Component of Yeast Cleavage and Polyadenylation Factor Required for the Cleavage and Polyadenylation of mRNA. Mol. Cell. Biol. 21: 8346-8356 [Abstract] [Full Text]  
  • Ahuja, D., Karow, D. S., Kilpatrick, J. E., Imperiale, M. J. (2001). RNA Polymerase II-dependent Positional Effects on mRNA 3' End Processing in the Adenovirus Major Late Transcription Unit. J. Biol. Chem. 276: 41825-41831 [Abstract] [Full Text]  
  • Tran, D. P., Kim, S. J., Park, N. J., Jew, T. M., Martinson, H. G. (2001). Mechanism of Poly(A) Signal Transduction to RNA Polymerase II In Vitro. Mol. Cell. Biol. 21: 7495-7508 [Abstract] [Full Text]  
  • Fong, N., Bentley, D. L. (2001). Capping, splicing, and 3' processing are independently stimulated by RNA polymerase II: different functions for different segments of the CTD. Genes Dev. 15: 1783-1795 [Abstract] [Full Text]  
  • Huang, T., Kuersten, S., Deshpande, A. M., Spieth, J., MacMorris, M., Blumenthal, T. (2001). Intercistronic Region Required for Polycistronic Pre-mRNA Processing in Caenorhabditis elegans. Mol. Cell. Biol. 21: 1111-1120 [Abstract] [Full Text]  
  • Veraldi, K. L., Arhin, G. K., Martincic, K., Chung-Ganster, L.-H., Wilusz, J., Milcarek, C. (2001). hnRNP F Influences Binding of a 64-Kilodalton Subunit of Cleavage Stimulation Factor to mRNA Precursors in Mouse B Cells. Mol. Cell. Biol. 21: 1228-1238 [Abstract] [Full Text]  
  • Koonin, E. V., Wolf, Y. I., Aravind, L. (2001). Prediction of the Archaeal Exosome and Its Connections with the Proteasome and the Translation and Transcription Machineries by a Comparative-Genomic Approach. Genome Res 11: 240-252 [Abstract] [Full Text]  
  • Hilditch-Maguire, P., Trettel, F., Passani, L. A., Auerbach, A., Persichetti, F., MacDonald, M. E. (2000). Huntingtin: an iron-regulated protein essential for normal nuclear and perinuclear organelles. Hum Mol Genet 9: 2789-2797 [Abstract] [Full Text]  
  • Trettel, F., Rigamonti, D., Hilditch-Maguire, P., Wheeler, V. C., Sharp, A. H., Persichetti, F., Cattaneo, E., MacDonald, M. E. (2000). Dominant phenotypes produced by the HD mutation in STHdhQ111 striatal cells. Hum Mol Genet 9: 2799-2809 [Abstract] [Full Text]  
  • Mitic, L. L., Van Itallie, C. M., Anderson, J. M. (2000). Molecular Physiology and Pathophysiology of Tight Junctions I. Tight junction structure and function: lessons from mutant animals and proteins. Am. J. Physiol. Gastrointest. Liver Physiol. 279: G250-G254 [Abstract] [Full Text]  
  • Hirose, Y., Manley, J. L. (2000). RNA polymerase II and the integration of nuclear events. Genes Dev. 14: 1415-1429 [Full Text]  
  • Dass, B., McMahon, K. W., Jenkins, N. A., Gilbert, D. J., Copeland, N. G., MacDonald, C. C. (2001). The Gene for a Variant Form of the Polyadenylation Protein CstF-64 Is on Chromosome 19 and Is Expressed in Pachytene Spermatocytes in Mice. J. Biol. Chem. 276: 8044-8050 [Abstract] [Full Text]