Previous Article | Next Article 
Molecular and Cellular Biology, July 2002, p. 5248-5256, Vol. 22, No. 14
0270-7306/02/$04.00+0 DOI: 10.1128/MCB.22.14.5248-5256.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.
Lsm Proteins Are Required for Normal Processing of Pre-tRNAs and Their Efficient Association with La-Homologous Protein Lhp1p
Joanna Kufel, Christine Allmang,,
Loredana Verdone,,
Jean D. Beggs, and David Tollervey*
Wellcome Trust Centre for Cell Biology, The University of Edinburgh, Edinburgh EH9 3JR, United Kingdom
Received 11 February 2002/
Returned for modification 20 March 2002/
Accepted 18 April 2002
Depletion of any of the five essential proteins Lsm2p to Lsm5p and Lsm8p leads to strong accumulation of all tested unspliced pre-tRNA species, as well as accumulation of 5' and 3' unprocessed species. Aberrant 3'-extended pre-tRNAs were detected, presumably due to stabilization of transcripts that fail to undergo correct transcription termination, and the accumulation of truncated tRNA fragments was also observed. Tandem affinity purification-tagged Lsm3p was associated with pre-tRNA primary transcripts and, less efficiently, with other unspliced pre-tRNA intermediates but not mature tRNAs. Association of the Saccharomyces cerevisiae La homologue Lhp1p with pre-tRNAs was reduced approximately threefold on depletion of Lsm3p or Lsm5p. The association of Lhp1p with larger RNA polymerase III transcripts, pre-RNase P RNA and the signal recognition particle RNA (scR1), was more drastically reduced. The impaired pre-tRNA processing seen on Lsm depletion is not, however, due solely to reduced Lhp1p association as evidenced by analysis of lhp1-
strains depleted of Lsm3p or Lsm5p. These data are consistent with roles for an Lsm complex as a chaperone that facilitates the efficient association of pre-tRNA processing factors with their substrates.
* Corresponding author. Mailing address: Wellcome Trust Centre for Cell Biology, King's Buildings, The University of Edinburgh, Edinburgh EH9 3JR, United Kingdom. Phone: 44 131 650 7092. Fax: 44 131 650 7040. E-mail:
d.tollervey{at}ed.ac.uk.
Present address: Institut de Biologie Moleculaire et Cellulaire, UPR 9002 du CNRS, 67084 Strasbourg Cedex, France.
Present address: Department of Molecular Biology, University of Rome "La Sapienza," 00185 Rome, Italy.
Molecular and Cellular Biology, July 2002, p. 5248-5256, Vol. 22, No. 14
0022-538X/02/$04.00+0 DOI: 10.1128/MCB.22.14.5248-5256.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.
This article has been cited by other articles:
-
Scofield, D. G., Lynch, M.
(2008). Evolutionary Diversification of the Sm Family of RNA-Associated Proteins. Mol Biol Evol
25: 2255-2267
[Abstract]
[Full Text]
-
Lee, T., Feig, A. L.
(2008). The RNA binding protein Hfq interacts specifically with tRNAs. RNA
14: 514-523
[Abstract]
[Full Text]
-
Spiller, M. P., Reijns, M. A. M., Beggs, J. D.
(2007). Requirements for nuclear localization of the Lsm2-8p complex and competition between nuclear and cytoplasmic Lsm complexes. J. Cell Sci.
120: 4310-4320
[Abstract]
[Full Text]
-
Fleurdepine, S., Deragon, J.-M., Devic, M., Guilleminot, J., Bousquet-Antonelli, C.
(2007). A bona fide La protein is required for embryogenesis in Arabidopsis thaliana. Nucleic Acids Res
35: 3306-3321
[Abstract]
[Full Text]
-
Spiller, M. P., Boon, K.-L., Reijns, M. A. M., Beggs, J. D.
(2007). The Lsm2-8 complex determines nuclear localization of the spliceosomal U6 snRNA. Nucleic Acids Res
35: 923-929
[Abstract]
[Full Text]
-
Mas, A., Alves-Rodrigues, I., Noueiry, A., Ahlquist, P., Diez, J.
(2006). Host Deadenylation-Dependent mRNA Decapping Factors Are Required for a Key Step in Brome Mosaic Virus RNA Replication. J. Virol.
80: 246-251
[Abstract]
[Full Text]
-
XIAO, S., DAY-STORMS, J. J., SRISAWAT, C., FIERKE, C. A., ENGELKE, D. R.
(2005). Characterization of conserved sequence elements in eukaryotic RNase P RNA reveals roles in holoenzyme assembly and tRNA processing. RNA
11: 885-896
[Abstract]
[Full Text]
-
Zaric, B., Chami, M., Remigy, H., Engel, A., Ballmer-Hofer, K., Winkler, F. K., Kambach, C.
(2005). Reconstitution of Two Recombinant LSm Protein Complexes Reveals Aspects of Their Architecture, Assembly, and Function. J. Biol. Chem.
280: 16066-16075
[Abstract]
[Full Text]
-
Kufel, J., Bousquet-Antonelli, C., Beggs, J. D., Tollervey, D.
(2004). Nuclear Pre-mRNA Decapping and 5' Degradation in Yeast Require the Lsm2-8p Complex. Mol. Cell. Biol.
24: 9646-9657
[Abstract]
[Full Text]
-
Fernandez, C. F., Pannone, B. K., Chen, X., Fuchs, G., Wolin, S. L.
(2004). An Lsm2-Lsm7 Complex in Saccharomyces cerevisiae Associates with the Small Nucleolar RNA snR5. Mol. Biol. Cell
15: 2842-2852
[Abstract]
[Full Text]
-
Liu, Q., Liang, X.-h., Uliel, S., Belahcen, M., Unger, R., Michaeli, S.
(2004). Identification and Functional Characterization of Lsm Proteins in Trypanosoma brucei. J. Biol. Chem.
279: 18210-18219
[Abstract]
[Full Text]
-
Inada, M., Guthrie, C.
(2004). Identification of Lhp1p-associated RNAs by microarray analysis in Saccharomyces cerevisiae reveals association with coding and noncoding RNAs. Proc. Natl. Acad. Sci. USA
101: 434-439
[Abstract]
[Full Text]
-
Kufel, J., Allmang, C., Verdone, L., Beggs, J., Tollervey, D.
(2003). A complex pathway for 3' processing of the yeast U3 snoRNA. Nucleic Acids Res
31: 6788-6797
[Abstract]
[Full Text]
-
Pillai, R. S., Grimmler, M., Meister, G., Will, C. L., Luhrmann, R., Fischer, U., Schumperli, D.
(2003). Unique Sm core structure of U7 snRNPs: assembly by a specialized SMN complex and the role of a new component, Lsm11, in histone RNA processing. Genes Dev.
17: 2321-2333
[Abstract]
[Full Text]
-
Yoshihisa, T., Yunoki-Esaki, K., Ohshima, C., Tanaka, N., Endo, T.
(2003). Possibility of Cytoplasmic pre-tRNA Splicing: the Yeast tRNA Splicing Endonuclease Mainly Localizes on the Mitochondria. Mol. Biol. Cell
14: 3266-3279
[Abstract]
[Full Text]
-
Yang, Y., Meier, U. T.
(2003). Genetic Interaction between a Chaperone of Small Nucleolar Ribonucleoprotein Particles and Cytosolic Serine Hydroxymethyltransferase. J. Biol. Chem.
278: 23553-23560
[Abstract]
[Full Text]
-
Noueiry, A. O., Diez, J., Falk, S. P., Chen, J., Ahlquist, P.
(2003). Yeast Lsm1p-7p/Pat1p Deadenylation-Dependent mRNA-Decapping Factors Are Required for Brome Mosaic Virus Genomic RNA Translation. Mol. Cell. Biol.
23: 4094-4106
[Abstract]
[Full Text]
-
Lee, Y., Nazar, R. N.
(2003). Terminal Structure Mediates 5 S rRNA Stability and Integration during Ribosome Biogenesis. J. Biol. Chem.
278: 6635-6641
[Abstract]
[Full Text]
-
KUFEL, J., TOLLERVEY, D.
(2003). 3'-processing of yeast tRNATrp precedes 5'-processing. RNA
9: 202-208
[Abstract]
[Full Text]
-
Kufel, J., Allmang, C., Petfalski, E., Beggs, J., Tollervey, D.
(2003). Lsm Proteins Are Required for Normal Processing and Stability of Ribosomal RNAs. J. Biol. Chem.
278: 2147-2156
[Abstract]
[Full Text]