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CELL GROWTH AND DEVELOPMENT

Binding to Nonmethylated CpG DNA Is Essential for Target Recognition, Transactivation, and Myeloid Transformation by an MLL Oncoprotein

Paul M. Ayton, Everett H. Chen, Michael L. Cleary
Paul M. Ayton
Department of Pathology, Stanford University School of Medicine, Stanford, California
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Everett H. Chen
Department of Pathology, Stanford University School of Medicine, Stanford, California
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Michael L. Cleary
Department of Pathology, Stanford University School of Medicine, Stanford, California
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  • For correspondence: mcleary@stanford.edu
DOI: 10.1128/MCB.24.23.10470-10478.2004
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  • FIG. 1.
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    FIG. 1.

    Amino-terminal MLL sequences are essential for myeloid transformation by MLL-ENL. At the top of the figure is a scale map of conserved and/or functional MLL domains in the MLL-ENL chimeric oncoprotein. Vertical lines indicate AT hook motifs (AT1, AT2, and AT3). Shaded boxes indicate nuclear translocation sequences (NTS1, NTS2, and NTS3), subnuclear localization domains (SNL1 and SNL2), homology with U1 snRNP (U1 snRNP), and similarity to DNA methyltransferase (CXXC and basic). (A) Murine bone marrow cells enriched for stem-progenitor cells following 5-fluorouracil treatment were transduced with retroviral constructs expressing proteins that are schematically shown on the left side of the panel. The bar graph (right) indicates numbers of colonies with BLAST-like morphology obtained in the third round of serial replating. (B) Detection of MLL-ENL fusion protein expression in Cos-7 cells by Western blot analysis. Faint lower bands represent processed, prematurely terminated, or degraded protein. (C) Representative immunofluorescence analysis of transfected Cos-7 cells shows the typical localization to nuclear speckles manifested by all MLL-ENL proteins analyzed in this mutant series. Transfected proteins were detected with M2 monoclonal antibody that recognizes an amino-terminal FLAG epitope in all constructs.

  • FIG. 2.
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    FIG. 2.

    Subnuclear localization and nuclear translocation sequences 2 and 3 are dispensable for MLL-ENL-mediated myeloid immortalization. (A) The bar graph (right) indicates numbers of colonies with BLAST-like morphology obtained in the third round of serial replating (averages of triplicate determinations) in methylcellulose cultures following retroviral transduction of the mutant proteins shown on the left. (B) Detection of MLL-ENL fusion protein expression in Cos-7 cells by Western blot analysis. (C) Photomicrographs show typical localization in nuclear speckles for mutants in this series.

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    FIG. 3.

    Alignment of CXXC domains demonstrating highly conserved residues in various proteins. Shading denotes amino acid residues that are identical with human MLL. Site-directed mutations created in MLL-ENL are indicated above the alignment. Identity and similarity consensus sequences are indicated at the bottom of the figure.

  • FIG. 4.
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    FIG. 4.

    The CXXC domain is essential for MLL-ENL transformation. (A) The bar graph (right) indicates numbers of colonies with BLAST-like morphology obtained in the third round of serial replating (averages of triplicate determinations) in methylcellulose cultures following retroviral transduction of the mutant proteins shown on the left. (B) Detection of MLL-ENL fusion protein expression in Cos-7 cells by Western blot analysis. (C) The photomicrographs show typical localization in nuclear speckles for MLL-ENL mutants in this series.

  • FIG. 5.
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    FIG. 5.

    Point mutations in the CXXC domain abolish transcriptional activation and DNA binding by MLL-ENL. (A) Gel-shift assay of CXXC mutants. Bacterially expressed proteins (indicated above the gel lanes) were incubated with a radiolabeled CG dinucleotide-containing probe or the proximal CG box of the HSV TK promoter. Protein-DNA complexes (arrow) were electrophoresed on nondenaturing polyacrylamide gels and exposed to film overnight. WT, wild type. (B) MLL-ENL constructs containing mutations in the CXXC domain were transfected into REH cells along with an HSV TK luciferase reporter gene. Relative luciferase values were normalized to protein concentrations. Bars represent means and standard deviations of three experiments.

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  • TABLE 1.

    Mutants of MLL-ENL employed for these studies

    Designation(s)Deleted amino acidsDescription
    ΔN135-289Large N-terminal deletion
    ΔN235-170SAG+NCS deletion
    AT+NTS172-317Contiguous deletion of all AT hooks and NTS1
    NTS1242-288Deletion of NTS1
    AT1-2, -3172-226, 303-306Deletion of AT1 through AT2 and AT3
    AT1176-179Deletes RGRP sequence of AT1
    AT1176-179Deletes RGRP sequence of AT1
    AT2222-225Deletes RGRP sequence of AT2
    AT3303-306Deletes RGRP sequence of AT3
    NTS3-SNL2727-1106Deletion of NTS3 through SNL2
    U1 snRNP-1869-1014Large deletion of RERE/U1 snRNP and flanking sequences
    U1 snRNP-2869-897Small deletion of RERE/U1 snRNP
    SNL1+2400-443, 1008-1106Deletion of SNL1 and SNL2
    SNL1400-443Deletion of SNL1/NTS2/Trx1 homology domain
    NTS3727-748Deletion of NTS3
    SNL21008-1106Deletion of SNL2/Trx2 homology domain
    CXXC/basic1153-1250Deletion of CXXC/DNA methyltransferase homology domain and flanking basic region
    CXXC1151-1197Deletion of CXXC domain
    Basic1200-1250Deletion of basic region
    CC/AA1155, 1158Substitution of cysteines with alanines at 1155 and 1158 in CXXC domain
    E1165A1165Substitution of glutamate with alanine at 1165 in CXXC domain
    KFGG/AAAA1178-1181Substitution of KFGG with AAAA in CXXC domain
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Binding to Nonmethylated CpG DNA Is Essential for Target Recognition, Transactivation, and Myeloid Transformation by an MLL Oncoprotein
Paul M. Ayton, Everett H. Chen, Michael L. Cleary
Molecular and Cellular Biology Nov 2004, 24 (23) 10470-10478; DOI: 10.1128/MCB.24.23.10470-10478.2004

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Binding to Nonmethylated CpG DNA Is Essential for Target Recognition, Transactivation, and Myeloid Transformation by an MLL Oncoprotein
Paul M. Ayton, Everett H. Chen, Michael L. Cleary
Molecular and Cellular Biology Nov 2004, 24 (23) 10470-10478; DOI: 10.1128/MCB.24.23.10470-10478.2004
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KEYWORDS

CpG Islands
DNA
DNA-Binding Proteins
Proto-Oncogenes
transcription factors
Transcriptional Activation
Translocation, Genetic

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