Table 1.

Expressed genes identified from 2D gel in Fig. 2

Mol wtpISpot no.YPD gene nameaProtein abundance (103copies/cell)mRNA abundance (copies/cell)Codon bias
17,2596.75133CPR115.261.70.769
18,7024.8083EGD220.15.20.724
18,7264.44147YKL056C61.288.40.831
18,9785.95135YER067W3.76.70.118
19,1085.04130YLR109W94.49.70.680
19,6819.08136ATP711.0NAb,c 0.246
20,5056.07111GUK116.53.70.422
21,4445.25148SAR15.410.40.455
21,5834.9895TSA1110.640.10.845
22,6024.3080EFB166.123.80.875
23,0796.29112SOD212.62.20.351
23,7435.44137HSP26NAd 0.70.434
24,0335.9796ADK117.416.40.656
24,0584.43143YKL117W29.210.40.339
24,3536.30140TFS18.10.70.146
24,6625.8599URA525.46.00.359
24,8086.3397GSP126.35.20.735
24,9088.73122RPS518.6NAc 0.899
25,0814.6581MRP89.3NAc 0.241
25,9606.06116RPE15.80.70.372
26,3789.55127RPS396.8NAc 0.863
26,4675.18100VMA410.53.70.427
26,6615.8498TPI1NAd NAc 0.900
27,1565.5693PRE86.90.70.129
27,3346.13115YHR049W18.42.20.520
27,4725.3392YNL010W31.63.70.421
27,4808.95123GPM110.0169.40.902
27,4808.95124GPM1231.4169.40.902
27,4808.95125GPM17.5169.40.902
27,8095.97139HOR25.70.70.381
27,8744.4678YST113.652.80.805
28,5954.5141PUP24.40.70.147
29,1566.59114YMR226C14.52.20.283
29,2448.40120DPM15.011.20.362
29,4435.9148PRE43.43.70.162
30,0126.39138PRB121.21.50.449
30,0734.6377BMH114.728.20.454
30,2967.94121OMP267.441.60.499
30,4356.3489GPP170.211.20.703
31,3325.5788ILV613.93.00.402
32,1595.46113IPP163.13.70.752
32,2636.00149HIS122.44.50.232
33,3115.3584SPE315.16.70.468
34,4655.60129ADE18.75.20.305
34,7625.3285SEC1410.96.00.373
34,7975.8542URA149.58.90.237
34,7996.0490BEL1103.281.00.875
35,5565.9743YDL124W6.44.50.206
35,6198.4159TDH169.832.7c 0.940
35,6505.4968CAR15.23.00.339
35,7126.72117TDH249.6473.0c 0.982
35,7126.72154TDH2863.5473.0c 0.982
35,7126.72155TDH279.4473.0c 0.982
36,2724.85128APA18.70.70.425
36,3585.0575YJR105W17.617.10.522
36,3585.0576YJR105W27.517.10.522
36,5966.3779ADH258.9260.0c 0.711
36,7146.30102ADH1746.1260.00.913
36,7146.30103ADH117.6260.00.913
36,7146.30104ADH161.4260.00.913
36,7146.30105ADH152.7260.00.913
37,0336.2344TAL144.83.70.701
37,7967.3657IDH229.46.70.330
37,8866.49106ILV576.04.50.892
38,7007.8355BAT130.911.20.469
38,7026.2446QCR2NAd 2.20.326
39,4775.5886FBA117.8183.60.935
39,4775.5887FBA1427.2183.60.935
39,5406.50150HOM260.34.50.592
39,5616.12156PSA196.427.50.718
41,1586.0149YNL134C14.91.50.316
41,6237.1858BAT219.08.90.250
41,7287.29110ERG1024.14.50.543
41,9005.4274TOM4022.32.20.375
42,4026.2945CYS36.78.90.621
42,8835.6367DYS115.85.20.526
43,4096.31107SER110.51.50.292
43,4215.5991ERG62.214.10.408
44,1747.3256YBR025C13.16.00.684
44,6824.9972TIF12.939.40.834
44,7077.77108PGK123.7165.70.897
44,7077.77109PGK1315.2165.70.897
46,0806.7230CAR215.4NAc 0.495
46,3838.5253IDP17.70.70.436
46,5535.9847IDP232.4NAc 0.197
46,6796.3950ENO135.40.70.930
46,6796.3951ENO16.60.70.930
46,6796.3952ENO12.20.70.930
46,7735.8263ENO215.5289.10.960
46,7735.8264ENO2635.5289.10.960
46,7735.8265ENO293.0289.10.960
46,7735.8266ENO231.0289.10.960
47,4026.09126COR12.50.70.422
47,6668.9854AAT211.76.00.338
48,3645.2573WTM174.513.40.365
48,5306.2061MET1738.129.00.576
48,9045.1869LYS916.23.70.463
48,9874.90153SUP4529.611.90.377
49,7275.4770PRO213.65.20.297
49,9129.2762TEF2558.5282.00.932
50,4445.6735YDR190C4.82.20.228
50,8376.1132YEL047C3.81.50.387
50,8914.59151TUB211.27.40.404
51,5476.8027LPD118.92.20.351
52,2167.2529SHM219.77.40.722
52,8595.5437YFR044C30.26.70.442
53,7985.1971HXK226.57.40.756
53,8036.05145GYP64.40.70.147
54,4035.2939ALD637.72.20.664
54,4035.2940ALD66.62.20.664
54,5026.2031ADE136.31.50.417
54,5437.7525PYK1225.3101.80.965
54,5437.7526PYK139.8101.80.965
55,2216.66146YEL071W16.33.00.244
55,2954.35134PDI166.214.10.589
55,3645.9824GLK122.66.00.237
55,4817.97118ATP121.62.20.637
55,8866.4728CYS422.2NAc 0.444
56,1675.8333ARO814.33.00.324
56,1675.8334ARO89.13.00.324
56,5846.3620CYB218.9NAc 0.259
57,3665.5360FRS22.30.70.451
57,3835.98144ZWF15.60.70.215
57,4645.4936THR421.43.70.508
57,5125.507SRV26.5NAc 0.260
57,7274.92152VMA233.78.90.546
58,5736.4717ACH14.41.50.327
58,5736.4718ACH15.41.50.327
61,3535.8721PDC16.5200.70.962
61,3535.8722PDC1303.2200.70.962
61,3535.8723PDC116.3200.70.962
61,6495.5438CCT82.21.50.271
61,9026.21101PDC54.3NAc 0.828
62,2666.1916ICL120.1NAc 0.327
62,8628.0219ILV35.34.50.548
63,0826.40119PGM22.23.00.402
64,3355.775PAB130.41.50.616
66,1205.428STI16.70.70.313
66,1205.429STI16.40.70.313
66,4505.29141SSB27.0NAc 0.880
66,4505.29142SSB22.3NAc 0.880
66,4565.2310SSB164.579.50.907
66,4565.2311SSB159.079.50.907
66,4565.2312SSB113.779.50.907
68,3975.8282LEU43.13.00.407
69,3134.9013SSA224.318.60.892
69,3134.9014SSA277.118.60.892
74,3788.4615YKL029C2.83.70.353
75,3965.826GRS15.57.40.500
85,7206.251MET62.0NAc 0.772
85,7206.252MET610.9NAc 0.772
85,7206.253MET61.4NAc 0.772
93,2766.11131EFT117.941.60.890
93,2766.11132EFT15.741.60.890
102,064e 6.61e 94ADE34.85.20.423
107,482e 5.33e 4MCM32.7NAc 0.240
  • a YPD gene names are available from the YPD website (39).

  • b NA, calculation could not be performed or was not available.

  • c mRNA data inconclusive or NA.

  • d No methionines in predicted ORF; therefore, protein concentration was not determined.

  • e Measured molecular weight or pI did not match theoretical molecular weight or pI.