TABLE 3

Transduction family members

ElementGenomic coordinate (hg19)TSDFull-lengthaIdentification source and/or reference(s)
Lineage progenitor L1Chr11: 95169381AAAGAATTGTAYReference genome; 3
Donor L1Chr3: 38626082AGAATGAGTAAATAATGY35, 49, 71, 77, 79, 8287
De novo L1Chr1: 231719316AAAGAAATGACATCTGYThis study
Ref_Chr7_q21.3Chr7: 96475963GAAAGTTCCAGTTGCYReference genome
Non-ref_Chr3_p24.3Chr3: 20748904TAAAGACACY35, 49, 71, 77, 79, 82, 83, 87
Ref_Chr1_p31.1_aChr1: 84518060AGAAAAACAAATCAYReference genome
Ref_Chr1_p31.1_bChr1: 83125969AAAAAAAATGGTTCATGCNReference genome
Ref_Chr9_p23Chr9: 12556931GAAAAGTATTGTATTGNReference genome
Non-ref_Chr3_p12.2_aChr3: 80590176GAAAATGGAATGGGY35, 37, 49, 77, 79, 82, 83
Non-ref_Chr3_p12.2_bChr3: 82144869AGAAATAATAATTTCCY49, 71, 77, 79, 83, 85, 86
Non-ref_ChrX_p11.4ChrX: 38097551AAAAGCGATATGY49, 86
Non-ref_Chr17_q12Chr17: 32813609AAGAAGGTAAGATGGN71, 77, 79, 8284, 87
Non-ref_Chr1_p22.2Chr1: 90914512AAAAAGCTCTTTCAGN49, 71, 77, 79, 85, 86
Non-ref_Chr4_q12Chr4: 53628490TAAATTACAGGTTAN49, 71, 77, 79, 82, 83, 86
  • a Y, yes; N, no.